>input_sequence_64759
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-----------------------------------------------------------------------------ATG
GGCGGCACGCCGCGGAGCAGCATCGGCCACATCCTGCCCGGCGCCGGCTTCTTCACCGTCGGCCTGTGGCACCTGTTCAA
CCACATTAGGCTCTTCTCCCAGCGCCCGGACTCCTACGTCGCGCCGGTGTGGTTCCCCGTGCCGCGCGCGCGCTACCTCG
AGCCCGCCCTCGTCATCGCCGGCAGCGCCCTCGAGTTCGTCATGGAGATGTTCGTGGACCACTCCACCTTCCTGCCGTTC
GACGCCGACGGCTCCATCCCGTCGGACCGCCTCCACAACCACGAGCACGCCATCATCTGCCTGGCCCTCATCGTCTACGC
GGGCGGCGCCGTCCACCTGGACCGCGCTCGGGCTCCGGGGCGCCGCGCGCTCTGCCTGCTGCTCGTGTCGGTGGTGTTCG
CGCAGGAGCTCCTCGTATTCCACTTCCACTCCACCGACCACGCCGGCGTCGAGGGCCAGTTCCACTGGATCCTCCAGGTG
GTCGTCGCGGCGTGCCTCGGCACCGCGCTCCTCGGCGTCGGCTTCCCGCGGAGCTTCGCGGTGAGCCTGGCCCGGTCGGC
GTGCATCATGTTCCACGGGGTGTGGCTGGCGGTCATCGGCGCCATGGTGTGGGTGCCCAGCATGGTGCCCAAGGGGTGCT
CGCTGGTGCGCGAGGACGGCCGCGACACGGTGCGCTGCCACAGCAAGGCCAGCCTTCACCGCGCCAGGGCGCTCGTGAAC
CTGCAGTTCGGGTGGTACCTGTCCTTCATGACCGTGCTCGTCCTCGCGGTCTATCTCTACGTTTGCAGCAAATACCCCGC
CGACCAACCGTACGCGCGGCTCCTCCGGAAAGCCGGCGACGAGGAGGAAGAGCATGACCTAGAGGCGCGCAAGTGCGGGG
TGCCGCGTGACGGCGGCAGCGACGTGCATGCGCGTGGCTTCGCGCCACTGGAGATCCAGGTGTAA---------------
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>chr5D_1_TraesCS5D01G236700
TTGTATGCACCACCTCACGTCACATTTGCAATGAATATATTGTGTGAGCTATAGTGCAAAACCCAAATCAAGTAGCAGGG
GGAAGGCACAAAGAATGTTCCTCCTTATCTCCAGAAAGGCAAAAGAAAAATTGAGCACTACAATGAATGAGCAAAATAAT
TAGCCATACTAGGATATGCAGACACCGATCACTTGCATGACTTATATAATTAGAGAAGTTTATCCCTCTTAAAGGTGTTG
CTGCGGAAGAAGTTGTCTTAGTCATAGGTGTTCTCTTTTTCATATCTTCTAACATTTTGGCCCTGGTTAGCTTTGTTATG
TACTTTGCTTAATAGTATTAATAATGGTTGTGTGCATCATAATGATGCAGATGTCTGGATTTCAACCTCTTTTTGAAAGA
AGCTGAAACGCGCAGGGGGCGGGGGGATACATGATTGTGTTCCTCTTCTTTGTTTGATTTTTATGAAGTTCATGAGCATC
AAGTTTTTGACAAGGCAAAGCGAGCAGTAGGGGCCTTTAGTATGCCTAGCAGGCGGTATAATGAGAAGTAGGGCTGCACA
ATTATCCATATTCTCCAGTTTTCAAGTGTGTTCTACCATAGTCTCAACATGTTCACGTGGAAATCTACTCTGAAAGCCTT
GCCCCAAAATTTCCCAATCGACGTGGCTATGTTAGGTTTGGTGCAAAAGTGAA---------------------------
--------------------------------------------------------------------AGTACAATATTG
CAATTGCG-TGCAACCTTTTCTTAGAAGACATGTTTGGTCATCC-TTTTTGTGGAAACAGTAACGGAGGTCTAACTTGCC
ACATGAACAGGATAGTGAAGCACACTGGTGCTGACTGACTTACAAGCAACTCCTTTGCATGTTTATCACTTACTCAAGGA
CGAGCTCCCTCCCT------------CCAACCCTGCTGGAATTTCGTACAAACTGCCACCTTTTATAGATACCTGACCAA
TGTCCCCGAGCGCACCACTCAAACG-----GTCAATCGGTCCAACCTGCAGCTACGTAGGTGCA---ACCGCCGGCCATG
GGCGGCACGCCGCGGAGCAGCATCGGCCACATCCTGCCCGGCGCCGGCTTCTTCACCGTCGGCCTGTGGCACCTGTTCAA
CCACATTAGGCTCTTCTCCCAGCGCCCGGACTCCTACGTCGCGCCGGTGTGGTTCCCCGTGCCGCGCGCGCGCTACCTCG
AGCCCGCCCTCGTCATCGCCGGCAGCGCCCTCGAGTTCGTCATGGAGATGTTCGTGGACCACTCCACCTTCCTGCCGTTC
GACGCCGACGGCTCCATCCCGTCGGACCGCCTCCACAACCACGAGCACGCCATCATCTGCCTGGCCCTCATCGTCTACGC
GGGCGGCGCCGTCCACCTGGACCGCGCTCGGGCTCCGGGGCGCCGCGCGCTCTGCCTGCTGCTCGTGTCGGTGGTGTTCG
CGCAGGAGCTCCTCGTATTCCACTTCCACTCCACCGACCACGCCGGCGTCGAGGGCCAGTTCCACTGGATCCTCCAGGTG
GTCGTCGCGGCGTGCCTCGGCACCGCGCTCCTCGGCGTCGGCTTCCCGCGGAGCTTCGCGGTGAGCCTGGCCCGGTCGGC
GTGCATCATGTTCCACGGGGTGTGGCTGGCGGTCATCGGCGCCATGGTGTGGGTGCCCAGCATGGTGCCCAAGGGGTGCT
CGCTGGTGCGCGAGGACGGCCGCGACACGGTGCGCTGCCACAGCAAGGCCAGCCTTCACCGCGCCAGGGCGCTCGTGAAC
CTGCAGTTCGGGTGGTACCTGTCCTTCATGACCGTGCTCGTCCTCGCGGTCTATCTCTACGTTTGCAGCAAATACCCCGC
CGACCAACCGTACGCGCGGCTCCTCCGGAAAGCCGGCGACGAGGAGGAAGAGCATGACCTAGAGGCGCGCAAGTGCGGGG
TGCCGCGTGACGGCGGCAGCGACGTGCATGCGCGTGGCTTCGCGCCACTGGAGATCCAGGTGTAAATGTGTCAAGCTGTA
GC-----TAGAGTCCCCGCAGATGCATTGTACTACAGTGCTTGTCTGAAT------GTTATCTATCTACGAATATCCATG
GATCGACCGGTTCGTA------CGTGCCTATTTTTTGCCTCGCTTTTTACAGGCA-TTGAAGAGGAAAACATGCTTATCA
AAAGGCAAAAGCACGCATTGATTGGAGACGAAGACAAATGAGTTGGATAGCCAGCTGCCAGCGTATGATCGAGTTCGGTG
AAACAAGCAGACC-TTACTCCAAAGGTAAGTTTCTGTTTCCCAAGAAAAAAAG-GGT-----------------------
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---------------------------------------------------------------------------AAGTT
TTTGTGATGCTTTTTCATGGAGCCAGACAATTCGTG------------CACCCTATCCCTATAAGCACCTCTGGGATACT
GAGCCGAACGTCACATCTTGG-------GAAATCATCACAGGCGTCTCGTAGTCGATGAAAACGCCTCCTCCCACTGAAC
GAACATCGTCGGAAATTCTAAAATAAATACAGGAAAACACGAG--CACCAGTGTCAAGTTTAGAACTTGAACCCTTGTGG
GCTGATTCCACCATAAGGAATCTAACCATCTGAATTATGCTCAGTTCAGCTCTGTTTAGTTGTGTATAAAATGGCAAGCC
TCCTAGCCTCTGCACTATCAAAACATAACCATATCTTCATTAGACGGTAATAGTAACTCCAAGCATCAATGCCGAACCAA
TCCCTTGAAAATAGGGGGACAAGAGGTGAGCAATAGACGTGGCACCAAGCTCGATCATGATTTTTTTGTTAAACCTCTAG
TGCGGTGTCAATTGCCGACAGGGATGTTGGAAGGACATCAAACACAACAAGGTGTGGGGTAAGGGTGATCTCTCGCGGTG
TCCATCTGTCTTTTTACTGTGTCGAGGTGAAAATAAAATAGGAGAAACGGATGCCCAGACCCAGCCCCAGCGCCAGCCCC
CTAACCCTATCTCCCCTCTCCCTCGTCTGCCGCCGCCACCACTCAATGGCGGTCTCCCCCACAATCGTCACCATCACCAC
TTCT
>chr5A_570
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---------ATTCTCCATTTTTCAAGTGTGTTCTACCATAGTCTCAACATATTCACGTGGAAATCTACTCTCAAAGCGTT
GCCTCAAAATTTCCCAATCGACGTGGCTATGTTAGGTCTGGTGCAAAAATAAAAGTACTCTCTCTGTTCCAAAATAGATG
ACTCAACTTTGTACTAACTTTGTATTAAAGTTGGTACAAAATTAGGTCATTTATTCTGGAATGGAGGGAGTACAATATTG
CAATTGGCATGCAACCTTTTCTTAGAAGACATATTTGGTCATCTTTTTTTGTGGAAACAGTAACGGAGGTCTAACTTGCC
ACATGAACAGGAGAGTGAAGCACACTGGTG----CTGACTTACAAGCAACTCCTTTGCATGTTTATCACTTACTCAAGGA
CGAGCTCCCTCCGGCCATCAACACGACCAACCCTGCTGACACTTCATACAAACTGCCACCTTTTAT--ATAGCTGACCAA
TGT-TCCGACCGCACTACTCAAACA-----GTTAATCGGTCCAACTTGCAGCTACGTTGCAGGTAAGACCGCCGGCCATG
GGCGGCACGCCGCGGAGCAGCATCGGCCACATCCTGCCCGGCGCCGGCTTCTTCGCCGTCGGCCTGTGGCACCTGTTCAA
CCACATTAGGCTCTTCTCCCAGCGCCCGGACTCCTACGTCGCGCCGGTCTGGTTCCCCGTGCCGCGCGCGCGCTACCTCG
AGCCCGCCCTCGTCATCGCCGGCAGCGCCCTCGAGTTCGTCATGGAGATGTTCGTGGACCACTCCACCTTCCTGCCGTTC
GACGCCGACGGCTCCATCCCGTCGGACCGGCTCCACAACCACGAGCACGCCATCATCTGCCTGGCGCTCGTCGTCTACGC
GGGCGCCGCCGTCCACCTGGACCGCGCCCGGGCTCCGGGGCGCCGCGCGCTCTGCCTGCTCCTCGTGTCCGTGGTGTTCG
CGCAGGAGCTCCTCGTCTTCCACTTCCACTCCACCGACCACGCCGGCGTGGAGGGCCAGTTCCACTGGATCCTGCAGGTG
GTCGTCGCCGCCTGCCTCGGCACCTCGCTCCTCGGCGTCGGCTTCCCGCGGAGCTTCGCGGTGAGCCTGGCCCGGTCGGC
GTGCATCATGTTCCACGGGGTGTGGCTGGCGGTCATCGGCGCCATGGTGTGGGTGCCGAGCATGGTGCCCAAGGGGTGCT
CGCTGGTGCGCGAGGACGGCCGCGACACGGTGCGCTGCCATAGCAAGGCCAGCCTTCACCGCGCCAGGGCGCTCGTGAAC
CTGCAGTTCGGGTGGTACCTGTCCTTCATCACCGTGTTCGTCCTCACGGTCTACCTCTACGTGTGCAGCAGATACCCCGC
CGACCAAGCATACGCGCGGCTCCTCCCGAAAGCCGGCGAGGAGGAGGAGGAGCATGACCTAGAGGCGCGCAAGTGCGGGG
TGCCGCGTGACGGCGGCAGCGACGTGCATGCGCGTGGCTTCGCGCCACTGGAAATGGAGGCGTAAATGTGTCAAGCTGTA
GCTAGCATAGAGTCCCCGCAGATGCAATGTAC---AGTTCTTGTCTGAATCTGAACGTTATCTATCTACGAATATCCATG
GATCGACCGGTTCGTACGTGCTTCC-CCTATTTTTTGCCTCGCTTTTTACTGGCA-TTGAAGAGGAAAACATGCTTATCA
AAAGGCAAAAGCACGCATTGATTGGAGACCAAGACAAATGAGTTGGATAGCCAGCTGCCAGCGTATGATCGAGTTAGGTG
AAACAAGCAGACCTTTACTTCAAAGGTAAGTTTCTATTTTCCAAGAAAATAAG-GTACTCTCTCCGTTTCATTTTAGTCT
GCATATAAGATTTAGTCAAAGCCAAACTTCATAAAGTTTGACCAACTTTATAAAACAAAATACGAACATCTACAATAGTA
AATCTATATGGTATGAAAATTAATTTCATGGTGCATCTAACAATATTGATTTCATATTGTGAATCTTGATATTTTTTTAT
ATAAACTTAGTCAAAGTTAACAAAATTTGACTTTGATCAAATCTTATATGCAGACTAAAAAAAAACGGAGGGAGCAAGTT
TTTGTGATGCTTTTTCATGGAGCTAGACAATTCGTGCGAAAACACGCACACCCTACCCCTATAAGCACCTCTGGGTTACT
GAACCAACGC-CACATCTTGA-------GAAATCATCACATGCGTCTCGTAGTCGATGAAAAAGTCTTCTCCCACTGAAC
GAACATCGTCGGAAATTCTGAAATAAATACAGAAAAACTCGAG--CACCGGTGTCAAGTTTAGAACTTGAACCCTTGTGG
GCTGGTTTCACCACAAGAAATCTAACCATCTGAGTTATGCTCAGTTCAACTCTGTTTAGTTGTG--TAAAATGGCAAGCC
TCCTAG--------------------------------------------------------------------------
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>chr5B_599
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--------------------------------------TAGTCTCAACATGTTCACGTGGAAATCTACTCTGAAAGCCTT
GCCCCAAAATTTCCCAATCGACGTGGCTATGTTAGATCAGGTGCAAAAGTGTA---------------------------
--------------------------------------------------------------------AGTACAATATTG
CAATTGGCATGCAACCTTTTCTTAAAAGACATGTTTGGTCATCC-TTTGTGTGGAAACAGTAACGGAGGTCTAACTTGCC
ACATGAACAGGACAGTGAAGCACACTAGTG----CTGACTTACAAGCAACTCCTTTGCATGTTTATCACTTACTCAAGGA
CGAGCTCCCTCCCT------------CCAACCCTGCTGGAATTTCGTACAAACTGCCACCTTTTATA----CCTGACCAA
TGT-CCCGAGCGCACCACTCAAACGAAACGGTCAATCGGTCCAACCTGCAGCTACGTAGGTACA---ACCGCCGGCCATG
GGCGGCACGCCGCGGAGCAGCATCGGCCACATCCTGCCCGGCGCCGGCTTCTTCGCCGTCGGCCTGTGGCACCTGTTCAA
CCACATTAGGCTCTTCTCCCAGCGCCCGGACTCCTACGTCGCGCCGGTGTGGTTCCCCGTGCCGCGCGCGCGGTACCTCG
AGCCCGCCCTCGTCATCGCCGGCAGCGCCCTCGAGTTCGTCATGGAGATGTTCGTGGACCACTCGACCTTTCTTCCGTTC
GACGCCGACGGCTCCATCCCGTCGGACCGGCTCCACAACCACGAGCACGCCATCATCTGCCTAGCGCTCATCGTCTACGC
GGGCGCCGCCGTCCACCTGGACCGCGCTCGGGCTCCGGGGCGCCGCGCGCTCTGCCTGCTCCTGGTGTCCGTGGTGTTCG
CGCAGGAGCTCCTCGTCTTCCACTTCCACTCCACCGACCACGCCGGCGTCGAGGGCCAGTTCCACTGGATCCTGCAGGTG
GTCGTCGCCGCGTGCCTCGGCACCGCGCTCCTCGGCGTCGGCTTCCCGCGGAGCTTCGCCGTGAGCCTTGCCCGGTCGGC
GTGCATCATGTTCCACGGGGTGTGGCTGGCGGTCATCGGCGCCATGGTGTGGGTGCCGAGCATGGTGCCCAAGGGGTGCT
CGCTGGTGCGCAAGGACGGCCGCGACACGGTGCGCTGCCACAGCAAGGCCAGCCTTCACCGTGCCAGGGCGCTGGTGAAC
CTGCAGTTCGGGTGGTACCTGTCCTTCATGACGGTGTTCGTCCTCGCGGTCTACCTGTACGTGTGCAGCAGATGCCCCGC
CGAGCAAGCCTACGCGTGGCTCCTCCCGAAAGCCGGCGAGGAGGAGGAAGAGCATGACCTAGAGGCGCGCAAGTGCGGGG
TGCCACGTGACGGCGACAGCGACGTTCATGGGCGCGGCTTCGCGCCACTGGAGATCGAGGTGTAAATGTGTCAAGCTGTA
GCTAGC-TAGAGTCCCCGCAGACCCATTGTAC---AGTGCTTGTCTGAGTCTGAATGT----TATCTGCGAATATCCATG
GATCGATCGGTTCGTACTCGTCCGTGCCTATTTTTTGCCTCGCTTTTTACAGGCATTTGAAGGGGAAAACATGCTTATCA
AAAGGCAAAAGCATGCATTGATTGGAGACGAAGACAAATAGGTTGGGTAGCCAGCTGCCAGCGTATGATCGAGTTCGGTG
AAACAT---GACC-TTACTCCAAAGGTAAGTTTCTGTTTCTCAAAAAAAAAAGAGGT-----------------------
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---------------------------------------------------------------------------AAGTT
TTTGTGATGCTTTTTCACGGAGACGGACAATTCGCGCGAACGCACGCACACCCTACCCCTATGAACACCTCTGAGATACT
GAGCCGACAT-CACATCTCGGGATTGACGAAATCATCACAGGAGTCTTGTAGTCGATGAAAATGGCATCTCCCACTAAAC
GAACATCGCTGGAAATCCTGAACTAAATTCAGGAAAATACGAGAGCACCGGTGT--------------------------
--------------------------CATCTGAGTTATGCTCAATTCAGCTTTGTTTAGTTGTG--TAAAATGGCAAGCC
TCCTAGCATATGCACTATCAAAACATAACCATATCTTCATTAGACGGTAATAGTAACGCCAAGTATCAATGCCGAACCAA
TCCCTTGAAAATAGGGGGAAAAGAGGTGAGCGATAGACATGGCACAAAGCTCGATCATGATTTTTTTGTTAAACCTCTAG
TGTGGTGTCAATTGCCGACAGGGACGTTGGAAGGACATCAAACACAATAAGGTGCGGTGTAAGGGCGATCTCTCGCGATG
TTCATCTATCTTTTTACTGTGTCGAGGTGAAAATAAAATAGGAGAAACGGATGCCCAGCCCCAGCCCCAGCCCCCGTTCC
CTAACCCTATCTCCCCTCTCCCTCGTCTGCCGCCGCCACCACTCAACGGCGGTCTCCCCCACAATCACCACCACCACCAC
TTCT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS--------S--------------------------------------------------------------
-------------------------------------S------------------------------------------
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------SS------------------------------------------------------------------------
------------S-----------------SSSS----------------------------------------------
-------------------------------------------------------------------S------------
---S----------------------------------------------------------------------------
------------------------------------------------------S-------------------------
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-----------------------------S-----------------------------------S--------------
-----S------------------------------------------------------S--------S----------
----------------S--------------------------------------------------------S------
--------S-----------------------------------------------------------------------
---------------------------------------------------------S----------------------
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------------------------------------S----------------S--------S-------S---------
-------S-S----------------S------------S----------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------SSS---------------------------------------------
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-------------------------------------------------------S------------------------
-------SSSS---------------------------------------------------S-S--S------------
-------------------S-----------------------------S------------------------------
----S--S-----S---S---------------S------------------------------SS--------------
-------S-S-----------------------------------------------S-----S----------------
-------------------S-----------S------S------S----------------------------------
--S---------------------S----------------------S------S--S-------S-----------S--
-S-----S--------------------------------------------------S------------S--S-SS--
----------------------------------------------S-------------------SS-----S------
----
>forward_505
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-----TTTGACAAGGCAAAGCGAGC-------------------------------------------------------
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>reverse_2785
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----------------------------------------------------------------CCTCCTCCCACTGAAC
GAAC----------------------------------------------------------------------------
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