>input_sequence_64734
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--------------------------------------------------------------------ATGGACAAGCAG
CAGGTCTTTGGTTCCTCCTACGTGGACATGCCTTTCTTCGCGGCCAATGGTACGTACGACGCCGCGCGCGGCCGCTGTTT
CTTTGCGCATGCGATGATGCGGCTTCTGTAGCTTCAGTTTCACCGGCCAGGAGCCCAGGACACGCATGTGATGCCCTTTT
TT---CGGTTCCGTG--TGTGTAGGTGCAGCCACGGCACAGGGGGAGAGCCGGCCGAGGGCGCGGCGCAGGAGGCGGAGG
GCGGCGAGGTGCGGCGGAGGGGACGGTGACGGCGGGGACATGGACGGAGGAGGGGATCCCAAGAAGCGGCGGCTGACCGA
CGAGCAGGTGCACGGTCTGGAGCTGAGCTTCCGGGAGGAGCGCAAGCTGGAGACCGGCCGAAAGGTTCATCTCGCTGCCG
AGCTCGGGCTCGATCCCAAGCAAGTCGCCGTGTGGTTCCAGAACCGACGGGCGCGACACAAGAGCAAGCTTATGGAGGAG
GAGTTCGCCAAGCTCAAGCACGCCCACGACGCGGCCATCCTCCACAAATGCCATCTCGAGAACGAGGTATGCTTG--CTC
GCACACACCCACACTGGCATACATATGGCGCCGTACATCATAAATTCCTCTCCGTTCTTGCACA--AGCTGACTGACGCA
CATATGGCCAGTTGCTGAGGCTGAAGGAGAGGCTGGGAGCGACCGAGGAGGAGGTGCGGCGCCTCAGGTCGGCAGCTGGG
AGCCA---------CGGAGCATCCGGCAACGGCGGAGACGCCGCTGACGCCGTTGGCGCGTGCGGCGGGAGCCCGAGCTC
GTCCTTCTCGACGGGAACCTGCCAGCAGCATCCGGGTTTCAGCGGCGCAGGCCAGCTGGGGCCGGACGATGAGCTGATGA
TGTGCGTCCCCGAG----------------------------TATGGTGGCTACGCCGATAGCAGCGTGGTCGAGTGGTT
TAGCCTC-------------------------------------------------------------------------
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------------------------------------------------------------TATGGGCTAATTTGA-----
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>chr2A_1_TraesCS2A01G188500
AGATATGTACTCGGAAGAAATGCAGAACTCAGTAAATTAATCTCCAAAATTACGTGGTATATATAGAC----TATAGAGA
TCGTCAGCAAACACCCGAAAAAAAACACAGAGAGTTCGTCAGCAACGAGAGCAGATAAGGGC------------------
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-------------------------------------------------------------------GCGGGCGAGCGAG
GAAGTGAGTGAGTGCAACAGTATTAAGTACGTAGTAGGTACTAGTACCCCGGAAAAAAAAGTACGTAGTGGTAGTACTTG
GCTGCACCATACGTTTGCATCTCCCCCGCCGGGCGGCCTGGCTCGGAAAGCAACTAGCCGGCTAGCCGG----AGCCCCA
CCGGCGCTGGCGCTTGCCGCTGGGCACCTTTGCCACCTATATATATTACTCCGAGG------TCTCTCCCTCGAGACACG
CACTCCCCT--TCCTTGCTTAACATCAAATAGTGCCTTG----CGGTGGTCCTCCT---CTCGATCCAGTTCCTCACCAC
ACCAACACAACACAACCCACCGGGCCTCCCCTCTAACCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCTCAGCTCCCAACAGCAAGCATGGACAAGCAG
CAGGTCTTTGGTTCCTCCTACGTGGACATGCCTTTCTTCGCGGCCAATGGTACGTACGACGCCGCGCGCGGCCGCTGTTT
CTTTGCGCATGCGATGATGCGGCTTCTGTAGCTTCAGTTTCACCGGCCAGGAGCCCAGGACACGCATGTGATGCCCTTTT
TT---CGGTTCCGTG--TGTGTAGGTGCAGCCACGGCACAGGGGGAGAGCCGGCCGAGGGCGCGGCGCAGGAGGCGGAGG
GCGGCGAGGTGCGGCGGAGGGGACGGTGACGGCGGGGACATGGACGGAGGAGGGGATCCCAAGAAGCGGCGGCTGACCGA
CGAGCAGGTGCACGGTCTGGAGCTGAGCTTCCGGGAGGAGCGCAAGCTGGAGACCGGCCGAAAGGTTCATCTCGCTGCCG
AGCTCGGGCTCGATCCCAAGCAAGTCGCCGTGTGGTTCCAGAACCGACGGGCGCGACACAAGAGCAAGCTTATGGAGGAG
GAGTTCGCCAAGCTCAAGCACGCCCACGACGCGGCCATCCTCCACAAATGCCATCTCGAGAACGAGGTATGCTTG--CTC
GCACACACCCACACTGGCATACATATGGCGCCGTACATCATAAATTCCTCTCCGTTCTTGCACA--AGCTGACTGACGCA
CATATGGCCAGTTGCTGAGGCTGAAGGAGAGGCTGGGAGCGACCGAGGAGGAGGTGCGGCGCCTCAGGTCGGCAGCTGGG
AGCCA---------CGGAGCATCCGGCAACGGCGGAGACGCCGCTGACGCCGTTGGCGCGTGCGGCGGGAGCCCGAGCTC
GTCCTTCTCGACGGGAACCTGCCAGCAGCATCCGGGTTTCAGCGGCGCAGGCCAGCTGGGGCCGGACGATGAGCTGATGA
TGTGCGTCCCCGAG----------------------------TATGGTGGCTACGCCGATAGCAGCGTGGTCGAGTGGTT
TAGCCTC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------TATGGGCTAATTTGAAATTG
AGACGAGCTGGG------TATC------AACTGGATGCAGATCGATTACTATTCTAGTTAGCCATAGTGTTAATTAAGC-
------TGG--GGTGATCTCTAGGGCGTGC---CTGTTTAATTATGTA--GATAGTGTTGATTAATGGC-AAAGCTTGCA
AGCTAGCAAGTGTAGTACTACTGGTAGCTCTCTTGAAGTTCAGAGATGATGTG----TGCTATCATTTGATATATATTTT
ACTTCAGCAATAAATAGTCTTCTCGCGGGGAGGCACTGTGTATGTGCTAGTTGGCAATCATCTTAAGTAGGAGTTTGCTG
CTGTT--------------AGCTCTAAATATTGATGATGTTGATGTTGGTGGTGACTGCTGAGTACAGTATACAATTTCG
ATCTGTCCAGTAATAACAAATTAAAATGATGATTAATCGCTGGTTTTGGTAAAAATGAATGTAAATTTCGAAAGGATGAC
ACTTTTCATGGCCACTGCGCTCT-------------TACTACAAACTTTTGTATG----TTAGCCCTTGTGCCCTAATAT
AACTTTGTAAAGCATGAACTTTGTTTATATCAGTTCATTTCTTCATGGCTACAT----ATGGCCATTTCGCTCCTGTGTA
CTTATATATATACTGCTCCAACTTCATCTTTGGTAAAGTTATGAAGTCCGAACTACAGAGCACATGGAGTAACTTCAACA
AATTTAATTGTAA----GAACTGGTCGCAAAATATGTGAAAGTCACATTGTTAGGACTTTAGAC----CTAGACGGAGAA
TATTATGCAGCAGCTGTCATAAAATACTCCTCTAACCTATGATTAAATGAATAATTTTGCATCATAAATAGCTCTCATAT
ATAATACTCCCCCATCCAAAATAAGTATCATGGTTTTAGTTCAAATTTTGGATCAGAGGGAGTACAAGAATAGAACGTAC
TCTCAGGCATGTGGCACCAAAATAGAATGTAATTAAGTTGCATCTTGCTGAATTTGAAAATTTTGTGCATCAAATTCTTA
GTAATAAATGATGCGATCGAATTTCAATA
>chr2D_1
AGATATGTACTCGAAAGAAATGCAGAACTCAGTAAATCAATCTCCAAAATTACGTG----ATATAGAC----TATAGAGT
TCGTCAGCAAACACCCGCAAAAAAAA--A-AGAGTTCGTCAGCAACGAGAGCAGATAAGGGC------------------
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-------------------------------------------------------------------GCCGGCGAGCGAG
GAAGTGAGTGAGTGCAACAGTATAC---------------------------------------------GTAGTACTTG
GCTGCATCATACGTTTGCATCTCCCC-GCCGGACGGCCTGGCTCGGAAAGCAC--------CTAGCCGG----AGCCCCA
CCGGCGA------TTGCCGCT-GGCACCTTTGCCACCTATATATATTATTCCTAGG------TCTCTCCCTCGAGACACG
CACTCCCCTCCTCCTTACTTAACATCAAATAGTGCCTTG----CGGTGGTCCTCCT---CTCGATCCAGTTCCTCACCAC
ACCAACACAACACAACCCACCGGGCCTCCCCTCTAACCTCCCCACCAGGCCACCACCCCCCTTCTCTCC-----------
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--------------------------------------------CCTCCTCAGCTCCCAACAGCAAGCATGGACAAGCAG
CAGGTCTTTGGTTCCTCCTACGTGGACATGCCTTTCTTCGCGGCCAATGGTACGTACGACGCCGCGCGCGCCCGGTGTTT
CTTTGCGCATGCGATGATGCGGCTGCTGTAGCTTCAGTTTCACCGGCCGGCAGCCCAGGACACGCATGTGATGCCTTTTT
TT---CGATTCCGTG--TGTGTAGGTGCAGCCACGGCACAGGGGGAGAGCCGGCCGAGGGCGCGGCGCAGGAGGCGGAGG
GCGGCGAGGTGCGGCGGAGGGGACGGTGACGGCGGGGAGATGGACGGGGGAGGGGATCCCAAGAAGCGGCGGCTGACCGA
CGAGCAGGTGCATGGTCTGGAGCTGAGCTTCCGGGAGGAGCGCAAGCTGGAGACCGGCCGGAAGGTTCATCTCGCCGCCG
AGCTCGGGCTTGATCCCAAGCAAGTCGCGGTGTGGTTCCAGAACCGCCGGGCGCGACACAAGAGCAAGCTTATGGAGGAG
GAGTTCGCCAAGCTCAAGCACGCCCACGACGCGGCCGTCCTCCACAAATGCCACCTCGAGAACGAGGTATGCTCTCTCAC
ACGCACACTCACACTGGCATACATATGGCGCCGTACATCATCAATTCCTCTCTGTTCTTGCACA--AGCTGACTGACACA
CGTATGGCCAGGTGCTGAGGCTGAAGGAGAGGCTGGGAGCGACCGAGGAGGAGGTGCGGCGCCTCAGGTCGGCACCTGGG
AGCCA---------CGGAGCATCCGGCGACGGCGGAGACGCCGCTGGCGCCGTTGGCGCGTGCGGCGGGAGCCCTAGCTC
GTCCTTCTCGACGGGAACCTGCCAGCAGCATCCGGGTTTCAGCGGCGCAGACGTGCTGGGGCCGGACGATGACCTGATGA
TGTGCGTCCCCGAG----------------------------TATGGTGGCTACGCCGATAGCAGCGTGGTCGAGTGGTT
TAGCCTG-------------------------------------------------------------------------
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------------------------------------------------------------TATGGGCTTATTTGATATTG
AGACGAGCTGGGTATCACTATC------AACTGCATGCAGATCGATTACTATTCTAGTTAGCCATAGTGTTAATTAAGC-
------TGG--GGTGATCTCTAG-GCGTGC---CTGTTTAATTATGTA--GATAGTGTTGATTAATGGCAAAAGCTTGCA
AGCTAGCAAGTGTAGTACT---GGTAGCTCTGTTGAAGTTCAGAGATGATGTG----TGTTATCATTTGAT---------
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-----------------------------
>chr2B_19
------------------AATGCAGAACTCAGTAAATCAATCTCCAAAATTACGTG----ATATAGACTATATATACAGG
TCGTCAGCAAACACCCGCAAAAGAAA--AGAGAGTTCGTCAGCAACGAGAGCAGATAAGGGCATGTACAATGCATAGCCT
CAAGGTGATGCCTCGCATGCCATGTAGGATCGGATATGACGTAAAGTAGGTTCGGATAGGGAAGCGAGATCTTCTCAAGG
AGGCAGGTGTTTGAAGAGAAAAAGTGTGGTCCGGTGACAAAAACTGAAAAGGTTGGAGTGAAAAGTAAAGATGCATATAT
ACTACAGTCTTTATTTTTTATTTCTTAATTAGGCCCACTAGTGGTAGCTTTCATTGGGGAGAAAAAATAAATGTAGGTGC
CTCAAATTACTTTTTGTCGTGAAGCATATGTATCCATATGCCATCATTGTACATGCCCCCTAAAGGCGCCGGCGAGCGAG
GAAGTGAGTGAGTGCAACAGTATAC---------------------------------------------GTAGTACTTG
GCTGCATCATACGTTTGCATCTCCCC-GCCGGACGGCCTGGCTCGGAAAGCAC--------CTAGCCGG----AGCCCCA
CCGGCGA------TTGCCGCTGGGCACCTTTGCCACCTATATATATTACTCCTAGG------TCTCTCCCTCGAGACACG
CACTCCCCTCCTCCTTACTTAACATCAAATAGTGCCTTG----CGGTGGTCCTCCT---CTCGATCCAGTTCCTCACCAC
ACCAACACAACACAACCCACCGGGCCTCCCCTCCAACCTCC--------CCACCACCCCCCTTCTCTCC-----------
--------------------------------------------------------------------------------
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--------------------------------------------CCTCCTCAGCTCCCAACAGCAAGCATGGACAAGCAG
CAGGTCTTTGGTTCCTCCTACGTGGACATGCCTTTCTTCGCGGCCAATGGTACGTGCGACGCCGCGCGCGCCCGGTGTTT
CTTTGCGCATGCGATGATGCGGCT------------GTTTCACCGGCCAGGAGCCCAGGACACGCATGTGATGCCTTTTT
TT---CGATTCCGTG--TGTGTAGGTGCAGCCACGGCACAGGGGGAGAGCCGGCCGAGGGCGCGGCGCAGGAGGCGGAGG
GCCGCGAGGTGCGGCAGAGGGGACGGTGACGGCGGGGAGATGGACGGGGGAGGGGACCTCAAGAAGCGGCGGCTGACCGA
CGAGCAGGTGCACGGTCTGGAGCTGAGCTTCCGGGAGGAGCGCAAGCTGGAGACCGGCCGGAAGGTTCATCTCGCTGCCG
AGCTCGGGCTCGATCCCAAGCAAGTCGCGGTGTGGTTCCAGAACCGCCGGGCGCGACACAAGAGCAAGCTTATGGAGGAG
GAGTTCGCCAAGCTCAAGCACGCCCACGACGCGGCCATCCTCCACAAATGCCACCTCGAGAACGAGGTATGCTTG--CTC
GCACACACTCACACTGGCATACATATGGCGCCGTACATCATCAATTCTTCTCTGTTCTTGCACA--AGCTGACTGACACA
CGTATGGCCAGGTGCTGAGGCTGAAGGAGAGGCTGGGAGCGACCGAGGAGGAGGTGCGACGCCTCAGGTCGGCAGCTGGG
AGCCA---------CGGAGCATCCGGCGACGGCGGAGACGCCGCTGGCGCCGTTGGCGCGTGTGGCGGGAGCCCGAGCTC
GTCCTTCTCGACGGGAACCTGCCAGCAGCATCCGGGTTTCAGCGGCGCAGACGTGCTGGGGCCGGACGATGACCTGATGA
TGTGCGTCCCCGAG----------------------------TATGGTGGCTACGCCGATAGCAGCGTGGTCGAGTGGTT
TAGCCTG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TATGGGCTAATTTGATATTG
AGACGAGCTGGG------TATCACTATCAACTTCATGCAGATCGATTACTATTCTAGTTAGCCATAGTGTTAATTAAGC-
------TGG--GGTGATCTCTAG-GCGTGC---CTGTTTAATTATGTA--GATAGTGTTGATTAATGGCAAAAGCTTGCA
AGCTAGCAAGTGTAGTACT---GGTAGCTCTGTTGAAGTTCAGAGATGATGTG----TGTTATCATTTGATATATATTTT
ACTTCAGCAGTAAATAGTCTTCTTGGGTA----------GTATGTGCTAGTTGGCAATCATCTTAACTAGAAGTGGTGCT
GCTGCATTGTTCTAAATGAAGATCTAAATATTGATGATGGTGGTGGTGACTGG-------TAGTACAGTATACAATTTCG
ATCTGTCCAGTAATAACGAATTAAAATGACGATTAATCGCTGGTTTTGGTAAAC-TGAATGTAAAATTCAAAAGGATGAC
ACTTTTCACGGCCACTGCGCTCT-------------TAC---GAAGTTTTGTATG----TTAGCCCTTGTGCACTAATAT
AACTTTGTAAAGCATGAACTTTGTTTATA---------------------------------------------------
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>chr2B_249
CATCTC--------------------------------------------------------------------------
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----------------------CCCG-GCCAGACGGCCTGGCTTGGAAAGCAC--------CTAGCCGGCCGGAGCCCCA
CCGGCGC------TTGCCGCTGGGCACCTCTGCCACCTATTTATATCTCGTACGCCTAGGTCTCTCTCCCTCCAGACACG
CACTTTCCCCTCTT----------TCAACTAGCGCTTTGCGGCCGGTGGTCCTCCCCTCCTCGATCCAGTTCCTCACCAC
ACCAACAGCG--CAACCCACCGTGCCTCCCCTTCCTCTAATCTTCCAATTCCAACCATCG-TTTTCTCC-----------
--------------------------------------------------------------------------------
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--------------------------------------------CCTCCTCAGCTCCGAACAGCCGGCATGGACAACCAG
CAGCTCTTTGGTTCCTCCTACGTGGACGCGCCTTTCTTCGCGGCCAATGGTACGTCCGACGCCGCGCGCCCCCGGTG---
-TTTGCGCATGCGATGGTGCAGCTGCAGCAGCTTCAGTTTCACCGG--------CCAGGACACGCATGTGATGCCCTTTT
TT---CCATGTCGTGGTTGTATGTGTGCAGGCACGGCGCAGCGGGAGAGCCAGCCGAAGGCTCGGCGCAGGCGGCGGAAG
GCCGCGAGATGCGGCGGAGGGGATGGTAACGGCGGGGAGATGGACGGAGGAGGGGACCCCAAGAAGCGGCGGCTCACCGA
TGAGCAGGCAGAGATGCTGGAGCTGAGCTTCCGGGAGGAACGCAAGCTGGAGACTGGCCGGAAGGTGTATCTGGCCGCCG
AGCTCGGGCTCGACCCCAAGCAGGTCGCCGTGTGGTTCCAGAACCGCCGGGCGCGCCACAAGAGCAAGACGCTCGAGCAG
GAGTTCACCAGGCTCAAGCACGCTCACGACGCAGACATCCTCCACAAATGCCACCTCCAGAACGAGGTAAGCTTA--CTC
GCACACACTCACACTGGCATACATATGGCGCCGTGCAT-ATCAGTTCCTCTTCGTTCTTGCACAAGAGCTGACTGACACA
CATATGGCCAGGTGCTGAGGCTGAAGGAGAGGCTGAGAGCGACTGAGGAGGAGGTGCAGCGCCTCAGGTCGGCAGCTGGG
AGCCA---------CGGGGCATCCGGCGATGGCGGAGACGCCGCTGGCGCCGTTAGCGTGTGCGGCGGGAGCCCAGGCTC
GTCCTTCTCGACGGGAACCTGGCAGCAGCATCTGGGTTTCAGCGGGGCAAACGAGCTGGGGACGGACGATGACCTGATGA
TGTGCGTACCCGACTGTTTTTTCGCATGAATTAGCTAGAGTTTATGGTGGCTACGCCGATAGCAGCGTGTTCGAGTGTTT
T----TTAGCATGAAATAAAATCTCCCACAAAATAGG-----------CGCGTTAATTGCGCTATAGCTGCTCGGGAGCC
TCGCCGCTATGCTATGGC----TGCCGCCGCCAAATCCTCCACAAATACCTCCAAAGGGCTGCAGAATCAGGAAATACCT
CTAGAAATCATCTGTCCCGCCGGATAAGTTGTTGCTATTTGCTGTGATTGCCTGCTTTGCGGCCGGTATAGCTGCTGAGA
GAGAGGCTGCCACTAAATCATTTCTCGCGCAATTTTAATCTTTGGTTTTTAGCCTGTATATATGGGGTGATTTGAAATTG
ACACGAGCTGGA------CATC------AACTACATGCTGATCGATTACTATTCTAGTTAGCCATAGTTTTAATTAATAA
GTTG---GGACGACGATCTCTAA-GCGTGCGTATTGTTTAATTATGTATCAACAGTG-CGATTAATGGCAAAAGCTAGCA
AGCTAGCAAGTGTAGTACT---GGTCACTCTCTTGAAGATCACAGATGATGTGTAG-TGTTATTATTTGATATATA----
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>chrUn_977
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--------------------------------------------CCTCCTGAGCTCCGAACAGCAGGCATGGACAACCAG
CAGCTCTTTGGTTCCTCCTACGTGGACACGCCTTTCTTCGCGGCCAATGGTACGTACGACGCCGCGCGCCCCCGGTG---
-TTTGCGCATGCGATGATGCAGCTGCAGTAGCTTCATTTTCACCGG--------CCAGGACACGCATGTGATGCCCTTTT
TT---CCATGTCGTTGTTGTGTGTGTGCAGGCACGGCGCAGCGGGAGAGCCAGCCGAAGGCTCGGCGCAGGCGGCGGAGG
GCCGCGAGATGCGGCGGAGGGGATGGTAACGGCTGGGAGATGGACGGAGGAGGGGACCCCAAGAAGCGGCGGCTCACCGA
TGAGCAGGCGGAGATGCTGGAGCTGAGCTTCCGGGAGGAACGCAAGCTGGAGACCGGCCGGAAGGTGTATCTGGCCGCCG
AGCTCGGGCTCGACCCCAAGCAGGTCGCCGTGTGGTTCCAGTACCGCCGGGCGCGCCACAAGAGCAAGACGCTCGAGCAG
GAGTTCGCCAGGCTCAAGCACGCCCACGACGCAGCCATCCTCCACAAATGCCACCTCGAGAACGAGGTAAGCTTG--CTC
ATACACACTCACACTGGCGTACATAC---------------AAATTCCTCTTCGTTCTTGCACAAG--CTGACTGCCA--
------GCCAGGTGCTGAGGCTGAAGGAGAAGCTGAGAGCGACTGCGGAGGAGGTGCAGCGCCTCAGGTCGGCAGCTGGG
ATCCA---------CGC---------CGATGGCGGAGACTCCGCTGGCGCCGTTAGCGTGTGCGGCGGGAGCCCGCGCTC
ATCCTTCTCGACGGGAACCTGCCAGCAGCATCCGGGTTTCAGCGGGGCAGACGTGCTGGGGCGGGACGATGACCTGATGA
TGTGCGTCCCCGAGTGGTTTTTCGCATGAATTAGCTAGAGTTTATGGTGGCTATGCCGATAGCAGCGTGTTCGAGTGTTT
TTTAATTAGCATGAAATAAAATCTCCCACAAAATAGG-----------CGC-----------TATAGCTGCTCGGGAGCC
TCGCCGCTACGCTATGGC----TGCCGCCGCCAAATCCTCCACAAATCCCTCCAAAGGGCTTCAGAATCAGCAAAAACCT
CTAGAAATCATCTGTCCCGCCGGAAAAGTTGTTGCTATTTGCCGCGATTGTCTGCTATGCGGCCGCTATAGCTGCTGAGA
GTG--GCCGCCCTTAAATCCTTTCTCCGGCGATTTTAATCTTTGGTTTTTAGCCTGTATATATGGGGTGATTTGAAATTG
ACACGAGCTGGA------CATC------AACTACATGCTGATCGATTACTATTCTAGTTAGCCATAGTTTTAATTATTAA
TTAAGTTGG--GACGATCTCTAT-GCGTGCGTGCTGTTTAATTATGTATGGAGAGTGTGTATTAATGGCAAAAGCTTGCA
AGCTAGCAAGTGTAGTACT---GGTCGCTCTCTTGAAGATCAGAGATGATGTGTATATGTTATCATTTGATATATATTTT
ACTTCAGCCGTAAATTGTCTTCTTAGT--GAAGCACTATGTATGTACAAGTTGGCAATCATCTTTGC-------------
-------------AAATGAAGCTCTAAATATTGATGATGATGTTGTTGGTGGTGACTGGTTAGTACAATATACAATTTCA
ATCTGTCCAGTAATAACATATTAAAATGATGATTATTTGTTGGTTTTGGTAAAATC-AATGTAAAATCCAAAAGGATGAC
ATTTTTCACGGCCAATGATGATTATATGCTCTAACGTAC---AAAGTTTGTG-TGTTAATTAGCCCTTGTGTTCTAATAT
AACTTTGTAAAACATGAAATTTATTTATATCAGTTCATTTCCCCATACTACTGGCTACATGGTGCTTTCGCTCCTATGTA
CGTACTTATA-----CTCCAACT----CTTTGGTACAGTTAAGTGCGCGACTGTAGAGCTTACATGGATTAACTTCAACA
AATTCAGGTGTAATTAAGAACTGGTCGCAAAATATATGGAACTCAGATTATTATGACCTTAACCCTAGCTAGACGGAGAA
TATTAGACAACAGCTGTCATAAAATACTCTTCTAACCCAAGACCGAATGAGTAATT------------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr2D_1147
--------------------------------------------------------------------------------
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------------------------------------------------------CCAGGACACGCATGTGATGCCCTTTT
TTTTTCCATGTCGTGGTTGTATGTGTGCAGGCACGGCGCAGCGGGAGAGTCAGCCGAAGGCTCGGCGCAGGCGGCGGAGG
GCCGCGAGATGCGGCGGAGGGGATGGTAACGGCGGGGAGATGGACGAAGGAGGGGACCCCAAGAAGCGGCGGCTCACCGA
TGAGCAGGCGGAGATGCTGGAGCTGAGCTTCCGGGAGGAGCGCAAGCTGGAGACTGGCCGGAAGGTGTATCTGGCCGCCG
AGCTCGGGCTCGACCCCAAGCAGGTCGCCGTGTGGTTCCAGAACCGCCGGGCGCGCCACAAGAGCAAGACGCTCGAGCAG
GAGTTCGCCAGGCTCAAGCACGCCCACGACGCAGACATCCTCCACAAATGCCACCTCGAGAACGAGGTAAGCTTG--CTC
GCACACACACACACGGG--------------CGTACAT-ATCAATTCCTCTTCGTTCTTGCACAAG--CTGACTGACA--
------CCCAGCTGCTGAGGCTGAAGGAGAAGCTGAGAGCGACTGAGGAGGAGGTGCAGCGCCTCAGGTCGGCAGCTGGG
TGCCACGGGGCATCCGC---------CGATGGCGGAGACTCAGCTGGCGCCGTTAGCGTGTGCGGCGGGAGCCCGGGCTC
GTTCTTCTCGACGGGAACCTGCCAGCAGCATCCGGGTTTCAGCGGGGCAGACGTGCTGAGGCCGGACGATGACCTGATGA
TGTGCGTCCCCGAGTGGTTTTTCGCATGAATTACCTAGAGTTTATGGTGGCTACGCCGATAGCAGCGTGTTCGAGTGTTT
TTTA----TCATGAAATAAAATCTCCCACAAAATAGG-----------CGC-----------TATAACTGCTCGGAAGCC
TCGCCGCTATGCTATGGCTGCATGCCGCCGCCAAATCCTCCACAAATCCCTTCAAAGG----------------------
--------------------------------------------------CCTGCTATGCGGTCGCTATAGCTGCTGGAA
AAG--GCCGCCGCTAAATCGTTTCTCCCACGATTTTAATCTTTGGTTTTTAGCCTGTATATATGGGGTGATTTGAAATTG
ACACGAGCTGGA------CATC------AACTACATGCTGATCGATTACTGTTCTAGTTAGCCATAGTTTTAATTAATAA
GTTG---GG--GACGATCTCTAT-GCGTGCGTGTTGTTTAATTATGTATCGAGAGTGTTGATTAATGGCAAAAGCTTGCA
AGCTAGCAAGTGTAGTACT---GGTCACTCTCTTGAAGATCAGAGATGATGTG----TGTTATCATTTGATATATATTTT
ACTTAAGCCGTAAATTGTCTTCTTAGT--GAAGCACTGTGTATGTACAAGTTGGTAATCATCTTTGC-------------
-------------AAATGAAGGTCTAAATATTGATGATGATGTTG---GTGGTGACTGGTTAGTACGATATACAATTTCA
ATCTGTCCAGTAATAACATATTAAAATTATGATTATCCGTTGGTTTTGGTAAAAATGAATGT-AAAATCAAAAGGATGAC
ATTTTTCACGGCCAATGATGATTATATGCTCTAATATAC---AAAGTTTTGTATGTTAATTAGCCCTTGTGTTCTAATAT
AACTTTGTAAAACATGAAATTTATTTATATCAGTTCATTTCCCCATACTACTGGCTACATGGTGCTTTCGCTCCTATGTA
CGTACTTATATACTGCTCCAACT----CTTTGGTACAGTTAAGTGCGAGACTGCAGAGCGTACATGGATTAACTTCAACA
AATTCAAGTGTAACTAAGAACTGGTCGCAAAATATATGAAACTCAGATTGTTATGACTTTAACCCTAGCTAGACCGAGAA
TATTAGACAACAGCTGTCATAAAATACTCTTCTAACCCAAGACCGAATGAGTAATT------------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr2B_1426
--------------------------------------------------------------------------------
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------------------AGCAGGTCGCCGTGTGGTTCCAGAACCGCCGGGCGCGCCACAAGAGCAAGACGCTCGAGCAG
GAGTTCACCAGGCTCAAGCACGCTCACGACGCAGACATCCTCCACAAATGCCACCTCCAGAACGAGGTAAGCTTA--CTC
GCACACACTCACACTGGCATACATATGGCGCCGTGCAT-ATCAGTTCCTCTTCGTTCTTGCACAAGAGCTGACTGACACA
CATATGGCCAGGTGCTGAGGCTGAAGGAGAGGCTGAGAGCGACTGAGGAGGAGGTGCAGCGCCTCAGGTCGGCAGCTGGG
AGCCA---------CGGGGCATCCGGCGATGGCGGAGACGCCGCTGGCGCCGTTAGCGTGTGCGGCGGGAGCCCAGGCTC
GTCCTTCTCGACGGGAACCTGGCAGCAGCATCTGGGTTTCAGCGGGGCAAACGAGCTGGGGACGGACGATGACCTGATGA
TGTGCGTACCCGACTGTTTTTTCGCATGAATTAGCTAGAGTTTATGGTGGCTACGCCGATAGCAGCGTGTTCGAGTGTTT
TTTA----GCATGAAATAAAATCTCCCACAAAATAGGTGCGTTAATTGCGC-----------TATAGCTGCTCGGGAGCC
TCGCCGCTATGCTATGGCT----GCCGCCGCCAAATCCTCCACAAATACCTCCAAAGGGCTGCAGAATCAGGAAATACCT
CTAGAAATCATCTGTCCCGCCGGATAAGTTGTTGCTATTTGCTGTGATTGCCTGCTTTGCGGCCGGTATAGCTGCTGAGA
GAG--GCTGCCACTAAATCGTTTCTCCCGCAATTTTAATCTTTGGTTTTTAGCCTGTATATATGGGGTGATTTGAAATTG
ACACGAGCTGGA------CATC------AACTACATGCTGATCGATTACTATTCTAGTTAGCCATAGTTTTAATTAATAA
GTTG---GGACGACGATCTCTAA-GCGTGCGTATTGTTTAATTATGTACCAACAGTGTCGATTAATGGCAAAAGCTAGCA
AGCTAGCAAGTGTAGTACT---GGTCACTCTCTTGAAGATCACAGATGATGTGTAG-TGTTATTATTTGATATATA----
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-----------------------------
>SNPs
-------------S-----------------------S------------------SSSS-------------------S
-----------------S-------SSS----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
------S-------------------S-----S-------------------SSSSSSSSS-------------------
-------SSSSSS---------------------------------------S---------------------------
----------------S---------------------------------------------------------------
------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
----------------------------------------------------------------------S---S-----
------------------------S-------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
------------------------------------------------------------S-------------------
----------------------------------------------S---------------------------------
-----------------------------------------------------S--------------------------
--------S--------------------------------------------------------------------S--
-----------S--------------------------------------------------------------------
---------------------------S------------------S---------------------------------
--------------------------------------------------S-S-------------------S-------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-----------------------S--------------------------------------------------------
-------------------SSS-------------------------------------S--------------------
---------S-------------S-S-SS--S----------------------------------S---S---SSSSSS
SSSSS----------------------------------S--S---------------S-S-------------------
-----------------------------------------------------------------S---S----------
--------S------------------------------SSS---S--------------------------S-------
-----------------------------------------SS---SSSSSSSS--------SSS----------S----
-S--SS-----------------SSSS--------S-----S-SSSS-SSSSS--S--S-S-------S-----------
----S--S---------------------------S-----S---S-------S-------SS-----------------
-----SS--S-------------------S-------S-S--SSS-----S-----SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_98
------------------------------------------------------------------------------GA
TCGTCAGCAAACACCCGA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_1998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GCA
CATATGGCCAGTTGCTG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_567
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGTGGTAGTACTTG
GCTGCAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2012
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TTGCTGAGGCTGAAGGAGAG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_1998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CTTGCACAAGCTGACTGACG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_3597
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GTAC
TCTCAGGCATGTGGCA----------------------------------------------------------------
-----------------------------
