>input_sequence_64572
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-----------------ATGTCGTTTGCCGGCGTGTCTATCGCCCGCTACAGTGGCGACATCGCCCGTTACACCGGCGAC
GTCGCCAGCGGCCACGCCGTCGACGTCTCCACGGCCAGCGGTTACCACCTGCTTGTGGTCACCGGTTA---CTCGCGTAC
GAAAGCCTCTGCACCTACTACCGGCAAGGCGATCGCCTCTCTCCCTTTCACGGTGGGAGGCCGCCGTTGGTCCATCCGCT
GCTTCCCTGACGGCGACACCTCGGAAAGCAGCCAATACATCTCTCTCTATCTGCACCTTGTCGATAAAGATGTCACAGAG
GCTGTCAAGGTGCAGTACTCCTTTAGCTTCGTCGACGAGGTTGAAAACCAAGGCCCCGCATGTGTTCGAGCCAAAAAGGC
ACACGATTTCTCCAGCTGCCATGCGACATGGGGTCAAAAGTATTTTTGGAACAGAGTCGACCTCGAGAAGTCAAGTCATC
TCAAGGGCAACTGTTTCACCATCCGATGTGACCTCGCCGTCGCCACCACGTTTGATCGCTTCATCACGGTGCCGCCTTCC
AGCATACAACGGCATATCATGAACCTCCTCCTGTCCAAGGAGGGCACCGACGTGACGTTCAGCGTCGGCGGCGAGACGAT
CGT--CGCGCACCGGTGCGTGCTCGCGGCCCGGTCCTCAGTCTTCAAGGCAGAGCTCTTTGGCCCCATGATGGAAGGCAC
GATAGCAAGCGTCATACAGATAGAAGACATGGAGGCGAGAGTGTTTAGGGCCTTGCTTAGCTTTATTTACACCGACTCGC
TACCCGACATGGAGGATGACAACGTGGAGGATAGAGAAGCACAAGAATTGCTGTGGCTGCAGCACTTGCTTGCAGCGGCA
GATAGATACGATCTCCAAAGGTTGAAGATACTATGTGAAGAAAAGTTATGCAAACAC--AGCCGTGAGCTCGGTCAAAAC
TATTTTTATTCTAGCTGA--------------------------------------------------------------
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>chr3D_1_TraesCS3D01G377700
CCTAAT--------------------------------------------------------------------------
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-ATCTATAAGAATGGTTAG--TTATTTTCTGTATTTTTTAATATACTGTTTTGATATCTATGTTTCTAGGTTATAGTTTT
GTTTTCATGTCACCACTCACCAGTCAGTCAGTGTGACTTGATGTTATGCCAGAAGAA-CATTTTAATTGGTTGCATTATG
CGAGCTTTGGCAAGAAATAATTTGGATACATCGTGCCTAGCCTATCAATCCAAGATTTTA-TTTTCCAACTCAGAGAAGC
AACACCCTGTCATATCTCGCCTTAAGTGTGTATTTTCTTAATCATTTTTT-GACGTGAACTTTGC------TTTCTTTCT
ATTCAGGCAGCAACTCAGGTGGCAGAAAGTCATGGCGATGGGTGA---CCTGGA----CAGTCAAGCTACAAGATGGTGC
CCTTCCGTCGTCGAAGATATCATCGCTGAACTTTCTCTGAACGATGATTAGTGGT-------------------------
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--------------TTCTACCGTTGTTAGTTCCTATCTGAAACTTTCTTTTGTCAAGAAGCCGTATTTTACCCTAGAGAG
AGATCAACTGCAGCAATGGGCATGAGGAATTTTAAGATGCGCCAGTAGTATCA-----------------------TTGT
TTTCGGTTAGAACAGTTTGGCAACTGAATC-----------AG-------------------------------------
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------------------------------------------TATTCCTATCCAATTCCAATCTACGTGACTTATACTAC
TTTCAAATTCAATCAAAGCTGCAGATAGATTGAGTTTTTTTTCCTTTTCTTTTACGGGAGATAGATTGAGTTTTTTTTTA
ATGTAGACTGGGGGATCAAGATTTACCGCCGCATGTCCAAATAACCAACCTGTCCGCGTGTCTTAGTTGAGAGCCG---G
CTGGTTAGTCTCCATGTCCGTCTCGGCTTCAAGTTAAGAGTCCATGTCCGGGTGTGTTACGGCGTTGTATGTTGGCGTCT
ATATGATAC---------ACATACACAGCGTGATGTGAATCAACCTT---------------------------------
-------CTCGTCAACTCCGGCGACTCGCACAGGAGCGTCTAGTACTCTGAGTACACGGGTCCAGTCCAGATTTCAGTTA
TATCCTGCCCGTCCGCCATGTCGTTTGCCGGCGTGTCTATCGCCCGCTACAGTGGCGACATCGCCCGTTACACCGGCGAC
GTCGCCAGCGGCCACGCCGTCGACGTCTCCACGGCCAGCGGTTACCACCTGCTTGTGGTCACCGGTTA---CTCGCGTAC
GAAAGCCTCTGCACCTACTACCGGCAAGGCGATCGCCTCTCTCCCTTTCACGGTGGGAGGCCGCCGTTGGTCCATCCGCT
GCTTCCCTGACGGCGACACCTCGGAAAGCAGCCAATACATCTCTCTCTATCTGCACCTTGTCGATAAAGATGTCACAGAG
GCTGTCAAGGTGCAGTACTCCTTTAGCTTCGTCGACGAGGTTGAAAACCAAGGCCCCGCATGTGTTCGAGCCAAAAAGGC
ACACGATTTCTCCAGCTGCCATGCGACATGGGGTCAAAAGTATTTTTGGAACAGAGTCGACCTCGAGAAGTCAAGTCATC
TCAAGGGCAACTGTTTCACCATCCGATGTGACCTCGCCGTCGCCACCACGTTTGATCGCTTCATCACGGTGCCGCCTTCC
AGCATACAACGGCATATCATGAACCTCCTCCTGTCCAAGGAGGGCACCGACGTGACGTTCAGCGTCGGCGGCGAGACGAT
CGT--CGCGCACCGGTGCGTGCTCGCGGCCCGGTCCTCAGTCTTCAAGGCAGAGCTCTTTGGCCCCATGATGGAAGGCAC
GATAGCAAGCGTCATACAGATAGAAGACATGGAGGCGAGAGTGTTTAGGGCCTTGCTTAGCTTTATTTACACCGACTCGC
TACCCGACATGGAGGATGACAACGTGGAGGATAGAGAAGCACAAGAATTGCTGTGGCTGCAGCACTTGCTTGCAGCGGCA
GATAGATACGATCTCCAAAGGTTGAAGATACTATGTGAAGAAAAGTTATGCAAACAC--AGCCGTGAGCTCGGTCAAAAC
TATTTTTATTCTAGCTGAGCGGCACAGCTGTGGTGGGTTGAAGGAGGTATGCCTTGAATTC-CTCAAGACACCGTCTAAT
TTGAAAGAGATAACGGCGGCTGACGTCTTCGACGATATAGTTAGTACATGCCCCTATCTTTTAAAGGAGCTCATTGCCAA
GTTTGCTTCCTAAAATCGACAAAACCGGTTAGTTCCTGAAAGCCTATGTTTCGAAGTTGAAGCCTTACTTTCTTGCCACC
ATTTGATG-------TCATGTTGTTTGAGTAAGACATATTTC-TCTTTCAGGCGGCAGGTCAGGTGAAGGCGATGTGATG
TCCTGTACAATGTAACTACATGATACCCC--TGATCCGTTCTCAAAGATATTGTTGACAAACTTGCTACCCTTAAGGATT
ACTACTAGTCATGGATTTTGGCAAATTTTGGCAAATTTGAACCGCCATTCAATGAATGGGTGCACTTATGAATATCTATT
GCTTGTGGTCGATTAATAATATGGATTTAATGATTAAATGTTTTTAGGTTTTTGGTTGTTTTTTAATTTTAGGTTACTCA
AGGTAAGATGTAAAATCCTCTGCCTAGTTTGTTTTCGCTTTGGTTTGTTTGGTGCAAAATGATTCAAATGAAGAACTTAG
TGTAGTCTGATAAAATAAGAGTCCTAGCCATGTTGATCGAGTTGACCATCCCTCGTCGTTTGCCCGCGGGACCCACTATC
AAGAAGTGTATCCATGGCTTCTTGTACCAAGCGCTGTGTATACTATACTAGAAGCAAACGCGCGCTTCGTCGTCGTCT--
--------TTCATTGATGTTGTTATGCCATGGATCTTTCGTGCTCATACTGGACATCACAGTGGCATATATTTTGTTGTG
TTGGTGCTAAACATGAATTAGTACATGGCATCATGATGAGAAACTCCTCCAAAGACGAGGGTCTCTTCTCGCCTCCCGCC
GGCGCCGTCGCTGATCCACCTTGTCTTCGGTGGCCTTAGGGTCATGGAGGCGCGGTGGACCTCGGCCCTCGCCGGTGGG
>chr3B_1
CGGCCACACCATCGATGTCTCCACGGCAAGCGGGTACCATCTGCTTGTGGTTGATGACTACTCGCACATCAAAGCAAACT
ACACCTAATGGAAAGGGGGTCTTCTCTCTCCCTTTCATGGTAGGAGGCCATCGTTGGAGAATCAGCTACTGTCCTAATGG
CCTCCTCTCAGAGAGTGCCAACTCTGCATCTCTCTTTCTTTCCCTTCTTGATGAAAATGTTACGAAGGCTCTGAAGGTGC
AGTACGGATTTAGTTTCGTCGACGAGGTTGAGAAGCAGGATTCAGCATTTTTTCGTGCATTGAAGCCAAGGAACTTCTCC
AGCAGTGTTCGATTTTGGGGTCACATGGATTTCATGAAAATAGAAGCTCTTGAGAAATCAAACCATCTAAAGGATGATTG
TTTCACCATCCGATGTGACCTCGCTGTTGCCACCACAGTTGATCTCCTCATCAAGGTACCGCCTTCTAGCATACAACGGC
ATATCAGCAACCTCCTCCTGTCCAAGGAAGGCACAGACGTGACATTCATTGTGTCCTGTGAGAAGTTTGCTGCCCACAGG
TGCGTGCTTGCAGCTCGGTCAGCGGTCTTCAAGGCAGAGCTGTTTGGCTCCATGAAGGAGGGCACTGTAGCAAGTGTCAT
ATATGTAGAAGACATGGAAGCAAAGGTGTTTAGCGCCTTGCTTGAATTTATTTACACCGACACGCTACCTGATATGGAGA
TAGACATGGGGGAGGAGGAAGGGGGAGCCCAAGAAGCATTGTTTTTGCAGCACTTGCTTGCAGCGGCGGATAGGTACGAT
CTCCAAAGGCTGAAAGCACTATGCGAAAAAAAGCTATGCAAACACATAGGTGTTGGCTCAGTGACGACTATCCTTGCTCT
GGCTGAGCAGCACAGCTGTTCTGGATTGAAGGAGGTTTGCTTTGAGTTCATCAAGACTCCTGCTAATTTGAAAGAGATAA
CGGCGGCTGATGGCCTGGAGGGCATAACTAGAACATGTCCCTCTCTTCTAAAGGAGCTCATTGCTAAGTTTACATCCTAA
AATGTATAAGAACGGTTAGTTTTTTTTTCTGTATTTTTTAATATACTGTTTTGATATTTATGTTTCTAGGTTGTACTTTT
GTTTCCTTTGG------CACCAGTCAGTTAGTGTGACTTCATGTTATGCCAGAA-AA-CATTTTAATTGGTTGCATCATC
TGCGCTTTGGGAAAAGAAAA--TGGATGTATCATGCCCAGCCCATCAATCCGAGATTTTATTTTTCCAATTCAGAGAAGC
AACATACCGTCATGTCTCGCT----GTGTGTCTTTTCTTGATAGTTTGCGACATACTGTATGAACATTCTGTTTCTTTCT
TTTCAGGCAGGAACTCAGTGGCAG---AGTCATAGCGATGGGTGA---GCTGGACGGACAGTCAAGCTACATCATGGTGC
CCTTCCGTTGTCGAAGATATCGGCGCTAAACTGTCGCTGAAGGATAACCAGTGGT-------------------------
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--------------TTGTACTGTTGTCAGTTCCTATCTGAAACTTG-TTTTGTCAACAAGGCATATTTTACCCTAGAGAG
AGATCAACTGCAGCAATGT---------------------GCCAGTAGTATCG-----------------------TTGA
TTTCGGCTAGAACAGTTTGGCAACTGGACAGCCTGTGCTCCATCTGTTTCAGTATTCCTATGGAAACTGCTTGGTTTCAT
CCGGATGCAGACGACTCGCTCGCGCAGCCGTCTTCTTTGACTGCCACGCGTCACATAGAGCCCACCACCGCTTTATTCTT
TCTCTCCCTTATCCTGTCATGTGATCATTTTCAGCCAGACGTCCTCCCTCTTCCTGTTCAAACCATCTTCTCCCCTCCCA
TTTCTTCTCTTCCATCGGGCGGGGATCTCACCCACCATGGATGCCCTCCACAAGCTCTTTTTTTAAGTGATTCGAGGGTG
CTGCGAGGGGGGCGGTTCGGCTGCGACGGCGACCTGATGCTGCGACGGGATTGCGACGGTGACCCGATGCTGCGACAAGA
TCTCGACTGCTCCGGTGATGCTGCGACGGCGCCGCCGCGCCGTGCTGCGACGGCCGTCGACATTTGGACGGCGTCATCGT
GCTGCGATTCGTGCTGCGACGACATCTCGGCAACGGCGGCTCAACTGCTGCGACAGCGATTCGAACTGCTCCGGCGATGT
TTGCGACGATGCCGGCGATGCTGCGACGACGCCGTCGTGCTTCGAGCCAGTGCTGCGACAATCATCGACAAGTAACGAGA
GGGTGCTGCGACGCCACCGCCGATGCTGCGAGGCCGCCGGAGCTGCTACGACGGGTGGAGTTGCTGCGAGCCGGTGCTGC
CGGCGCCGTCATGCTGCGAGCCAGTGGTGCGACGCCACCGCTGTGCAGCGAGTTGATGCTGAGAGGCCGCCGGAGTTGAT
ACGACGGGTGGCGTTGCTGCCGGCGCTGCCGTGCAGGCCGCCAGAGTTGCTAGGCGTCATGGTCATGGCTGTGTTATGCG
ATGGGAAGAACAGAGGGAGGGAAGACTGCGTTGACTTCCATCGGCGGCTAGGGACACCCAGATCGTACGGTTCAGGTGGA
TGTTGTTTTCTTTTTGCATCCGCATGACGCCTAGCAGCCTCCTATTCCTATCCAATTCCAATCTCCGTGACTTGCTACA-
-TTCAAATTCAATCAAAGCTGCAGATAGATTGAGTTTTTTTT--------------------------------------
ATGTAGACTGGGGGATCAAGATTTACCGCCGCTTGTCCAAATAACCAACCTGTCCGCGTGTCA-----------------
-------------------GTCTCGGCTTCTT-TTTAGA------GTCCGGGTGTGTTACGGCGTTGTATGTCGGCGTCT
ATATATACATACATACATACATACACAACGTGATGTGAATCGACCTGCTCGTCTGGGTGCGACGTGCGTGTTTT------
------GTTCGTCAACTCCGGCGACTCGCACAGGAGACTCG--------------------------------TCGGTTA
TATTCTGCCCGTCCGCCATGTCGTTCGCCGGCGTCTCTATCACCCGCTACGCTGGTGACAC-------------------
--CGCCACCGGCCACGCCGTCGACGTCTCCACGGCCAGCGGGTACCACCTGTTTGTGGTCACCGATTATTACTTGCGTAC
GAAAGCCTCTGTGC---CTCCTGGCAAGGCGATCGCGTCTCTCCCTTTCACGGTAGGAGGCCGCCGTTGGTCCATCCGCT
GCTTCCCTAACGGCGACACCTCGGAAAGCAGCCAATACATCTCTCTCTATCTGCACCTTGTCGATAAAGATGTCACAGAG
GCTGTGAAGGTGCACTACTCCTTTAGCTTCGTCGACGAGGTTGAAAACCAAGGCCCCGCATGTGTTCGAGCCAAAAAGGC
ACACGATTTCTCCAGCTGCCATGCGACATGGGGCCATAAGTATTTTTGGAAAAGAGACGACCTCGAGAAGTCAAGTCATC
TCAAGGGCAATTGCTTCACCATCCGATGCGACCTCGCCGTCGCCACCACGTTTGATCGCTTCATCACGGTGCCGCCTTCC
AGCATACAACGGCATATCATGAACCTCCTCCTGTCCAAGGAGGGCACCGACGTGACGTTCAGCGTCGGCGGCGAGACGAT
CGT--CGCGCACCGGTGCGTGCTTGCCGCTCGGTCTTCGGTCTTCAAGGCAGAGCTCTTTGGCCCCATGATGGAAGGCAC
GGTAGCAAGCGTCATACAAATAGAAGACATGGAGGCGAGAGTGTTTAGGGCATTGCTTAGCTTTATTTACACCGACTCGT
TACCCGACATAGAGGTCGACAACGTGGAGGAAAGAGAAGCCCAAGAATTATTGTGGCTGCAGCATTTGCTTGCAGCGGCA
GATAGATACGATCTCCAAAGGCTGAAGGTACTATGTGAAGAAAAGTTATGCAAACACATAGCCGTGAGCTCGGTCAGAAC
TATTTTTATTCTAGCTGAGCGGCACAGCTGTGGTGGACTGAAGGAGGTATGCCTTGAGTTC-CTCAAGACACCGTCTAAT
TTGAAAGAGATAACGGCGGCTGAAGTCTTCGACGACATAATTAGTACATGCCCCTATCTTTTAAAGGAGCTCATTGCCAA
GTTTGCTTCCTAAAATCGACAAAACCGGTTAGTTCCTGAAAACCTATGTTTCAAAGTTGAAGCCTTACTTTCTGGCCACC
ATTAGATG-------TCATGTTGTTTGAGTAAGACATTTTTTTTCTTTCATGCGGCAGGTCAGGTGAAGGCGATGTGATG
GCCTGTACAATGTAACTACATGATACCCATATGATCCGTTCTCAAAGATATTGTTGACAAACTTGCTACCCTTAAGGATT
ACTACTAGTCATGGATTTTGGCAAATTT----------GAACCGCCATTCAACGAATGGGTGCACTTATGAAAATCTATT
GCTTGTGATCGATTAACAATATGGATTTAATGATTAAATGTTTTCAGTT---------TTTTTAAATTTTAGGTTACTCA
AGGCAAGATGGAAAATCCTCTGCCTAGTTTGTTTACGCTTTGGTTTGTTTGGTGCGTAATGATTCAAATGAAGAGCTTAG
TGTAGTCTGATAAAATAAGAGTCCTAGCCATGTTGATCGAGTTGACCATTCCTCGTCGTTTGCCCGCGGGACCCACTATC
AA------------TGGCTTCTTGTACCAAGCGATGTGTATACTATACTAGA-GCAAACGCGCGCTTCGTCATCGTCTTT
CATCGTCTTTCATTGATGTTGTTATGCCATGGATCTTTCGTGCTCATATTGGACATCACAGTGGCATATATTTTGTTGCG
TTGGTGCTAAACATGAATTAGTACATGGCATCATGATGAGAAACTCCTCCAAAGACGAGGGTCT--TCTTGCCTCCCGCC
GCCGCCGCCGTTGATCCACCTTGTCTCCGGTGGCCTTAGGGCCATGGAGGTGTGGTGGACCTCGGCCCTAGCCGGTGGG
>chr3A_1
CCTAA---------------------------------------------------------------------------
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AATCTATAAGAATGGTTAG--TTTTTTTCTGTATTTTTTAATATACTGTTTTGATATCTATGTTTCTAGGTTGTAGTTTT
GTTTTCTTG-------TCACCAGTCAGTTAGTGTGACTTCATGTTATGCCAGAA-AAACATTTTAATTGGTTGCATTATG
TCTGCTTTGGCAAGAAATAATTTGGATACATCGTGCCCAGCCCATCAATCCAAGATTTTATT-TTCCAATTCAGAGAAGC
AACGCACTGTCATATCTCGCCTTAAGTGTGTATTTTCTTAATCATTTCTGCGACATGAACTTTTC------TTTCTTTCT
TTTCAGGCACCGATTCTGGTGGCAAAAAGTCATGGCGATGGATGATGACCTGGA----CTGTCAAGCTACGTGATGGTGC
CCTTCGGTTGTCGAAGATATCATCACTAAACTTTTGCTGAACGATGATTAGTGGTTTCTATGTTAGAATAAATTTGAGGC
ATACCGTTGATCATCCAAGGACTAAGCAATCACACGAGCATGACACCGAGATTTGTTAACGAGGTTCATCGATATGGCTA
CATCCCCGGGGCCTTACTACGGACGCTTCTCCCCGTGACACCGTCATAATACCGCACACCGGCCACCCGGGCGCCGGCAC
ACGCCGCCGGCTCCCGCTTGCGCGCCTATGCTATTATGTTGGCATTCAATATGTGAGTTGTTCACTTTTCACGCAGGTCA
GTGATCAGGATGTGATGGCGTTGGACTGATACTCTGGAAGTGAGCACAAACAAGAGTAACAAGGAACTTAATTTTGCTCG
AGTGTTGACAGTGGTCAAGAAAAGAAGGGACTACAAGTTGCAGGTGGAGTCATATGGAGTCTTTGGAGTAGCAGCGGTAC
TCATGAGATAAGCTCAGGTCCAATGTACATGGAAGTTTGACGCATTGACGAATTCAAAGTGGTGGAGAATATTCGCCAAG
GTGGAGTTTGTTAGAGTTGTGTCGAATATAGTGTACAAGGTAGGTTATAGTTGGACTAGGAGTTGTATTGTGTTTACATA
GGACACTTGTATCCTAGGCCTCTCATATATAGCGGGGATAGACACACGATGTAATCTATGCCAACATAATAGCACATGCG
CGCAAGGGGGAGCCGGCGGCGTGTGCCGGCGTCCGGGTGGCCGGTGTGCGGTATTGTGACGGTGTCACGGGGAGGAGCGT
CCGTAGTAAGGCCCCGGGGATGTAGCCATATCGGTGAACCTCGTTAACAAATCTCGATGTCGTGCTCGTGTGATTGCTTG
GTCCTCGAATGATCAACGGTATGCCTCGAATTTATTTTAACAAGTGGTATCAGAGCTAGGTCGTTTGGAGGCTGTGGATC
GTTGGTCTAGAGGATGAAGAAGCAGTAACGTGGTTGGATGTCTTGGCGGCGGCGAGTTGTAGTTGTTTGGTCGATTCGGT
GATCAGACGAGTTCTTGGTGATTCAGGCGTGAACTCGGGGAGATGCAATCGACGACGGCGGCGTGTCGCGCGCGACTGGC
AGACAGCACGTCGGTTCGGAGCGCTGGGTGCGAAAGTGCAAGGCAAGTGCGTGGGCTGCGGCCCAGGTGGAGAAGCCGCA
CGGCTGCAGCAGGCGGGCAACTCACGGGCTAAACGGCAGCTGGTGGGCTCAGGTGTACGTGTCCGTATGCAAAGCGATCA
GGCCAGGTCCGTGTACAAGGTACATGCATGAGATTTGTTTTGGATAAAAAGAGGACCGAGTCCTCACGTGACATACGACG
CAAGGCAGCAGATTATTTTGAGCGAAAGGAAAATCCGTCAAGCGATATTCATCCATTGGAATAGCAGGAGGCTGAGGCAA
AGCAACAGATAGCATTGGAGGTTGAGCTAGAGCTACTACACGTTGAAGATCAAAAGCGTTTTGGTTGGAATTGCTATTAG
TACGCGGAGGCTGTTCATGTACTTGGGCATCGCGTTAATAGCTCGGATAATTTTTCACAGTCAGTCATACAAAGAATCAT
GGCGCCAATGGGTACTAGGTTTGAGGTGAAGAAGTTCATGGAATTGAAAACCTTGGGTTATGGCAGATAAGGGTGAAAGA
TTTGTTGGCACAACAGGGATGCTTGAAGGCGTTGCAGGAAGCCAAGCCAGCTAAGATGGAATTATTATGTGATGGATGGA
AATTCGTGGAAGACGATTTGGGAGCCTCGAGCGTGTCATGCAGTCGGAGAAGTTCGGCTTGGTTGGACTAGATAGTCTGA
CGGATCGACGTGAGTCGGTTGATACAGAAGATGGTGGTGGGATCGGCGATGATGACATAGGCGCGTGATGCTGATGGTGA
CTGACTTTTGGGCGTGGAAACACGCGGCACGGGCCCAGAGGGCTTGTGTGGCTTCGACAAGACTATGGCGCGGGGTTGAT
TCAAGGTGGTGTATACACGGAGTTTGAAGTCGATGAGGCGCAGGGGTGGACTGATCATCTACCATGGAGTCATGTTGAAG
GTGGAGCTGGATTGAGGGGCTATGGCGTAAGAGCTCAGAGAGTCGAAGCCTATTCAGCGGGAAAAAGCGAGGGACGCGTA
GTTCGGACTGGAGCCCAGTGGTCTGATGGAAGCGTGAAACTCGTCATCGGTCGGTTATGATCGGTGGTACTCTGCAGTGG
GGGTTGAGTGGTGTGGGTTCGCGGACCTTGAGACTCGACCGGGACAGCGGAGACTCAACGCGGTAATAGCGGCGAGGCGT
GCGGTATGCACGGACATGGAGACGGGCCAGGGCTCTGGTGGTCATACATGTGGTGAGACAACTGCGAATTTGACTCAGAA
TGACTACAAGCAACGGTGAAATTCCTTCAAGTTTCAGACAGGCGGTCAAGAAAGGAGCGGTGATGTTGAGTTCAGGTAAC
TTTTATGTGTGACATCCAATATGTGAGTTGTTCACTTTCACGCAGGTCAGTGATCAGTATGTGATGGCGTTGGACTGATA
CTCTGGAAGTTGGGAGCACAAACAAGAGTAATAAGGAACTTAATTTTGCTCGAGTGCTGACAGTGGTCAAGAAAAGAAGG
GACTACAAGTTGCAGGTGGAGTCATATGGAGTCTTTGGAGTAGCAGCGGTACTCATGGGATAAGCTCAGGTCCAATGTAC
ATGAAAATTTGACGCATTGACGAATTTAAAGTGGTGGAGAATATTCGTCAAGGTGGAGTTTGTTAGAGTTGTGTCGAATA
TAGTGTACAAGGTAGGTTACAGTTGGACTAGGAGTTGTATTGTGTTTACATAGGACAGTTGTATCTTAGGCCTCTCATAT
ATAGCAGGGGTAGACACACGATGTAACATATGCCAACATAATAGCACAGGCGCGCAAGGGGGAGCCGGCGGCGTGTGCCG
GCGCCCAGGTGGCCGGTGTGCGGTATTGTGACGGTGTCACGGGGAGGAGCGCCCGTAGTAAAGCTCCGGAGATGTAGCCA
TATCGGTGAACCTCGTTAACAAATCTCGGTGTCGTGCTAGTGTGATTGCTTGGTCTTCGGATGATCAACGGTATGCCTCG
GATTTATTCTAACATTCTACCGTTGTTAGTTCCTAACTGAACTTGT-TTTTGTCAAGAAGGTGTATTTTACCCTAGAGAG
AGATCAACTGCGGTAATGT---------------------GTACGAGGAATTTTTAAGATGCGCCACTAGCACCATTTGA
TTTCGGTTACAACAGTTTGGCAACTGAACAGTTTAGGCATAAG-------------------------------------
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------------------------------------------TATTCCTATATATATCCAATCTCCGTGACTCGTACTTT
CAAATTGCGTC---------------------------------------------------------------------
--------------------------------------------------------CGTGTCTTAGTTGAGAGAGGGCTG
CTGGTTAGTCTCCATGTCCGTCTCGGCTTCAAGTTAAGA------GTCCGGGTGCGTTATGCTGTTGTGTTTTTGCGTCC
ATATA---------------ATACACGGCATGATGCGAATCAGCCATTGAGAAAAGCTCTGGCTAGTTTTGCAGAGGACC
AAATCGGCTCTTCAACTCCGAGGACTCGCTAAGGCGGTGACGCCACCGGCCACGCCGTCGA-------------------
-------------CGCCATGTCGTTTGCCGGCGTGTCTATCACCCGCTACACTGGCGACGCTG-----------------
-------CCGGCCACGCCGTCGACGTCTCCACGGGCAGCGGGTACCACCTGCTTGTGGTCGCCGATTA---CTCGCGTAC
GAAAGCCTATGCAT---CTACTGGCAAGGCGATCGCGTCTCTCCCTTTCACGGTAGGAGGCCGCCGCTGGTGCATCCGCT
ACTTCCCTAACGGCGACACCTCGGAGAGCCACCAATACATCTCTCTCCATCTGCACCTTGTTGATAAAGATGTCACAGAG
GCTGTGAAGGCGCAATGCACTTTTAGCTTCGTCGACGAGCTTGAAAACCAAGGCCCCGCATGTGTTCGAGCAAAAGAGGC
ACACGATTTCTCCAGCTGCCATGCGACATTGGCCCATCGGTATTTTTGGAAAAGAGACGACCTCGAGAAATCAAGTCATC
TCAAGGGCAACTCTTTCACCATCCGATGTGACCTCGCCGTCACCTCCATGTTTGATCGCTTCATCACGGTGCCGCCGTCT
AGCATACAACAGCATATCATGAACCTCCTCTTGTCCAAGGAGGGCACTGACGTGATGTTCAGCGTCGGCGACGAGACGAT
CAT--CGCACACCGGTGCGTGCTCGCGGCCCGGTCTTCCGACTTCAAGGCGGAGCTCTTTGGCCCCATGATGGAAGGCAC
CATAGCAAGCGTCATACAGATAGAAGACATGGAGGCGAGAGTGTTTAGGGCCTTGCTTAGCTTTATTTACACCGACTCGC
TACCCGACATGGAGGTCGACAACGTGGAGGAAAGAGAAGCCCAAGAATTGTTGTGGCTGCAACACTTGCTTGCAGTGGCA
GACAGATACGATCTCCAAAGGCTGAAGGTACTATGTAAAGAAAAGTTATGCAAACACATAGTCGTGAGCTCGGTCAAAAC
TATTTTTATTCTAGCTGAGCGGCACAACTGTGGTGGGCTGAAGGAGGTATGCCTTGAATTC-CTCAAGACACCACCTAAT
TTGAAAGAGATAACGGCGACTGACGTCTTCGACAATATAGTTACAGCATGTCCCTATCTTTTAAAGGAGCTCATTGCCAA
GTTTGCTTCGTGAAATCGACAAAAGTGGTTAGTTCCTGAAAT-CTATGTTTCTATGTTGAAGCCTTACTTTCTTGCCAAC
ATTCGATGTAGTGCCTCATGTTGTCTGAGTAAGCATTTT-----------------------------------------
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>chr3B_1072
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--------CGGCCACGCCATCAACGTACCCACGGCGAGTGGCTACCACCTGCTTGTGGTTAGCAACTA---CTCGCGTAC
AAAAGCCACCACAC---CTACTGGCACGGGGATCGTCTCACTCGATTTCATGGTGGGAGGCCATCGTTGGCGCATCGAGT
ACTATCCTAATGGCGACCGCCCAGAGTGCACCGACTCCATATCTCTCTTTTTGCGCCTAGTTGACAGAAGTGTAACAGGG
ACTTTGAAGGTGAAGTTCGATTTTAGTTTTGTCAACCAGCATGAGAAGCAAGATTCGTCATATATTCTTGCAGTCAAGCC
AGACGACTTCTCCAGCCCAAGCACATCTTGGGGTTACAACAATTTCATAAAAAGACAAGATCTTGAGAAATCAAATAATC
TAAATGATGATTGTTTCACCATCCGATGTGATATTGCGATTGCCACCACCGTTGATCTCTTTATTATGGTACCACCTTCA
GGAATACATGAGCATATCAGCAACCTCCTTCTGTCCAAGGAGGGCACCGATGTGACATTCAAGGTTGGCGAGGAAGAGTT
TGC--TGCCCATAGGTGCGTGCTCGCGGCTCGGTCTGCGGTGTTCAAGGCAGAGCTCTTTGGCCCCATGAAGGAGGGCAA
AATGGCAAGCGTCATACAGATCGAAGATATGGAATCAAAAGTTTTCAGGGCCTTGCTTGGCTTTATTTACACTGACTCAC
TGCCCGAAATGGAGATGAACACAATAGATGAAGGAAAAGCCCAAGAAACATTGTGGCTGCAACATTTGCTTGCAGCGGCG
GATAGATATGATCTCCAAAGGCTGAAAGCACTATGTGAAGAGAGGTTGTGTGAACAAATAAATGTGAGCTCTGTGACAAC
TATTCTTACTCAAGCCGAGCAGCTCAATTGTTGTGGATTGAAAGGGGTATGCTTTGAGTTT-CTCAAAACTACCACTAAT
TTGAAAGAGATAATAGCCGTGGACGGATTGGACGACATAACTAGAACCTGCCCCTCTCTTCTAAAAGAGCTCATTGCCAA
GCTTGTTTCCTAATATC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3A_1072
--------------------------------------------------------------------------------
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--------CGGCCACGTCATCAACGTATCCACGGTCAGTGGCTACCACCTGCTTGTGGTTAACAACTA---CTCGCGTAC
AAAAGCCACCACAC---CTACTGGCACAGGGATCGTCTCACTCGATTTCATGGTAGGAGGCCATCGTTGGTGCATCGAGT
ACTATCCTAATGGCGACCGCTCAGAGTGCACCGACTCTATATCCCTCTTTTTGCGCCTAGTTGATAGAAGTGTAACAGGG
ACCTTGAAGGTGAAGTTCGATTTTAGTATTGTCAACCAACATGAGAAGCAAGATTCGTCATATATTCTTGCAGTGAAGCC
AGACGACTTATCCAGCCCAAGCACATCTTGGGGTTACAACAATTTCATAAAAAGACAAGATCTTGAGAAATCAAATAATC
TTAAGGACGATTGTTTCATCATATGATGTGATATTGCGATTGTCACCACCGCTGATCTCTTTATTATGGTACCACCTTCA
GGAATACATGAGCATATCAGCGACCTCCTTCTGTCCAAGTTGGGCACTGATGTGACATTCAAGGTTGGCGGGGAAGACTT
TGGTGCGCCCACCGGTGCGTGCTCGCAGCTTGGTCTGCAGTGTTCAAGGCAGAGCTCTTTGGCCCCATGAAGGAGGACAA
AATGGCAAGTGTCATACAGATCAAAGATATGGAATCAAAAGTTTTCCAGGCCTTGCTTAGCTTTATTTACACCGACTCAC
TGCCCGAAATGGAGATGAACACAATAGAGGAAGGAAAAGCCCAAGAAACATTGTGGCTGCAACATTTGCTCGCAGCGGCG
GATACATATGATCTCCAAAGGCTGAAAGCACTATGTGAAGAGAGGTTGTGTGAACATATAGACGTGAGCTCTATGACAAC
TATTCTTACTCAAGCCGAGCAGCTCAATTGTTGTGGAATGAAAGGGGTATGCTTTGAGTTCTCTCAAAACTACCACTGAT
TTGAAAGAGATAATAGCCGCAGACGGATTGGACGACATAACTATAACCTGCCCCTCTCTTCTAAAAGAGATCATTGCCAA
GCTTGTTTCCTAATATCATCAAA---------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3D_1528
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GGTACCGCCTCCT
AGCATACAAGAGCTTATCAGCAACGTCCTCATGTCCAAGGAGGGCACTGACGTGACATTCAGCGTTCGCGGTGAGACACT
CGT--TGCACACCGGTGCGTGCTTGCGGCTCGGTCCCCGGTCTTCAAGGCAGAGCTCTTTGGCCCCATGAAGGAATGCAC
GATAGCTAGTGTCATACAAATAGAAGACATGGAAGCAAAAGTGTTTAGAGCCTTGCTAAGCTTTATTTACACTGACTCGC
TGCCCGAGATGGAGGTAGACATGGTGGAGGAACGGGAAGCCCAAGAAGCATTGTGGCTGCAACACTTGATTGCAGCGGCA
GATAGATACGATCTCGAAAGGCTGAAGGTACTATGTGAAGAAAAGTTATGCAAACTCGTAGACGTGAGCTCCGTGAGGAC
TATTTTCATTCTAGCCGAGAGGCACAATTGTGGTGGATTGAAGGATGTATGCCTTGAATTC-CTCAAGACACCGTCTAAT
TTGAAGGAGATAACGGCGGCTGACGTCTTCGACAATATAATTAGAACATGCCCCTATCTTTTAAAGGAGCTCATTGGCAA
GCTTGCTTCCTAAAATCCACAAAAATGGTTAGTTCTTGAAA-CCTATGTTTCCAAGTTGAAGCCTTACTTTCTTGCCACC
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3B_1528
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GGTACCGCCTCCT
ACCATACAAGAGCTTATCAGCAACCTCCTCATGTCCAAGGAGGGCACTGACGTGACATTTAACGTTGGCGGCGAGACGCT
CAC--TGCACACCGGTCTGTGCTTGTTGCTCGGTCTTCGGTCTTCAAGGCAGAGCTATTTGGCCCCATGAAGGTAGGCGC
GGTTGCCAGTGTCATACAAATTGAAGACATGGAAGCAAAAGTGTTTAGAGCCTTGCTAAGCTTTATTTACACCGGCTCGC
TACCCGAGATGGAGGTAGACATGCTGCAGGAAAGAGAAGCCCAAGAAGCATTGTGGCTGCAACACTTGATTGCGGCGGCA
GATAGATACAATCTACAAAGGCTGAAGGTACTATGTGAAGAAAAGTTATGCAAACTCATAGACGTAAGCACGGTGAAGAC
TATTTTTATTCTAGCTGAGAGGCACAATTGTGGTGGATTGAAGGATGTATGCCTTGAGTTC-CTCAAGACACCGTCTAAT
TTGAAGGAGATAACGGCGGCTGACGTCTTCGACGACATAATTAGAACATGCCCCTATCTTTTAAAGGAGCTCATTGCCAA
GCTTGCTTCCTAAAATCCACAAAAACGGTTAGTTCCTGAAA-CCTACGTTTCCAAGTTGAAGCCTTACTTTCTTGCCACC
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3A_1562
--------------------------------------------------------------------------------
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---------------------AACCTCCTCATGTCCAAGGAGGGCACTGACGTGACATTTAATGTTGGCGGCGAGACGTT
CGT--TGCACACCGGTCCGTGCTTGTGGCCCGGTCTTCGGTCTTCAAGGCAAAGCTCTTTGGCCCCATAAAGGAAGACAT
GATAGCTAGTGTCATACAAATAGAAGACATGGAAGCAAAAGTGTTTAGAGCCTTGCTTAGCTTTATTTACACCGACTTGC
TACCCGAGATGGAGGTGGACATGGTGGAGGAAAGAGAAGCCCAAGAAGTCTTGTGGCTGCAACACTTGATTGCAGCGGCA
GATAGATACAATCTCCAAAGGCTGAAGGTACTATGTGAAGATAAGTTATGCAAACTCGTAGACGTGAGCTCGGTGAGGAC
TATTTTCATTCTAGCCGAGAGGCACAATTGTGGTGGATTGAAGGATGTATGCCTTGAATTC-CTCAAGACACCTTCTAAT
TTGAAGGAGATAACGGCGACTAACGTCTTCGACGATATAATTAGAACATGCCCCTATCTTTTAGAGGAGCTCATTGGCAA
GCTTGCTTCCTAAAATCCACAAAAACGGTCAGTTCCTGAAA-CCTATGTTTCCAAGTTGAAGCGTTACTTTCTTGCCACC
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>SNPs
-----S--------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S------------------------------------------------S-------
------S--SSSSSSS------------S----------S--------------S-------------------------
S-S----------------------------------S----S--------------------------S----------
-----S-----------------------------------------S-S----S--------S----------------
S-----------------------S----------------------------------------------S--------
--------S------------------S-------S--------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------S-------------S-------------------
------------------SSSSSSSSSSSSSSSSSSSSSS------------S--------------------------S
----------------------------SS--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S--------S-----S
S-----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------------------------S----------------------------------------SS-----
---------------------------------------SSSSSS-----------------------------------
----SSSSS-----------------------------------------------------------------------
------------------------------------SS--SSSS--SSSSSSSS-SSSS-SSSSSSSSSSSSS--S----
---S-------------------------------------S---------S--------SS-SSSSSSSSSSSSSSSSS
SS-----S---------------------------------S----------------------S---------------
--------------SSS----S----------------------------------------------------------
--------S-----------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------S--------------S----S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------SS--------------S--------S---------S-----------------------------
---------------------S-----S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S----------S---------------------------
---S---------------------------------S---S--------S-----------------------------
S---------------------------S---------------------------------------------------
----------------------------SSSSSSSSSS--------------S-------------------S-------
-------S--------S---------------------------S--S-SSSSSSSSS-----S----------------
---S------S-----------------------S--------------------SS-----------------S-----
-------------------------------------------------S------------------------------
--SSSSSSSSSSSS-------------------S------------------S------------------S--------
------------------------------------------------S-----------------------------S-
----------------------------------------------------------------SS---S----------
-S-----S--S---------------S--------------S--------S-S----------------S---------
>forward_6152
--------------------------------------------------------------------------------
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----------------------------------------------------TACACGGGTCCAGTCCAGAT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_7001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ACAAGAATTGCTGTGGCTGC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_6336
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GTAC
GAAAGCCTCTGCACCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_8088
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------TCGCTGATCCACCTTGTCTT----------------------------------------------------
