>input_sequence_64516
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-ACCTAT-----------CCCGCACCGTAGCAACAGAAAGAAAAAGATCTCC---TCCG------CCGCCGCCGCCGCCG
CAATGCAGCGCCTCTCCATCGGATCGCCGGGCTCGAGGCCCAGCCTGGATGCCGCCCCCGCCGCGGCCGCAGACGAGGCG
GACGAGAAGGCGACGGGGAAGGCGGCCAGGGCGGCCGCGCCGGACAAGTCCATCCACCTCGTCCCCCTCCTCACGCTCCT
CTGCCTCCTCGTCCTCTTCCTCTTCTCCCACGACCCGGCCAGTTCCCGCGCCATCGCCGGTAAGTAGCCAGCCAAACCTT
CGCTCCACTCCCTTTCCCTCGCCGGCACTGCTCCTAACGCCGCTCGCCCGTCCGTGCAGATTCGCCGCCCGTCCTGGCCG
TCACCGCCCGCTCCCTCGAGGCCACAGGTAGGCGATAAGACTCGCGACGAACACC-----------CTGCGTCCCGTTCC
CCCATCTCTTGCCTCGTTTGATTTTCTCTCTCTCTCTCTCTCTCCTTTGTTCGTTCCTGCAGCGGACACGACGCCGTCGG
TGGCGCGGGGCGGCGCGCACCAGCGGCTGAAGGCGGACCCGACGCCGCGCCGCGGGCGAAGGCTGGGAGCGCCGCGGCGG
TGACGGCGACGGCGACGGCGCGGAATTGGGGAACGGGAAGGCTAAGGCTGGCCCACGTCCGCGCAAGCAGCTAGCCGTTG
GAACG---TACGACGCGTCCTCAGCGCACGTCTCTTTCTTCCCTCCACCCCCGTGCTGCGTCGTTGGTGGAACTTGAATG
GCCGCGAGCGTTCGTCTTCCTGTGGCCTCTA-GAAATTGGGATTAGATTACCAGCCGCCCGTCGCAATCGTCAATCACCA
TGTGTTCATACCCCATCGTCATTCTTTTCCCCCTTCGGTTGCTCACCTGCTATTGATTCTGTAATTCTTTTTCCGTAATT
GG---TAGTACTGATGAGGAAATTGATTGATAGAA---------------------------------------------
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>chr1A_1_TraesCS1A01G193800
TCCCAATGTTATTTGTGTTACTCTTCATTTGTTACATTAATGGTGACACTATATCTCCGTATA--GTCCATTTTATAGTA
ACACTATATCTTCATATAGTCCAATTGCTATATCTCAATATAGTCAATATTTATTTGGAACTACATCA----------AT
AAACTTTTATTGATCCAGATTATATTATATTGAAAA-CTTCTCAAGTGTCTAACTGTATCATTTATAGATCCACCATTT-
A---TCATTTTT-TAAACTATTTCAAAATT-ATGGCCCGATAGTT------TATCAGTCATGAAGTTGTCTTGTGTAACT
TTTACAACAATTATTTTGTGTAAC-CTTTACAACAATCTCTTCATCTCCTCTCAAGGGAAGAAGCAAAGTTTTCGTCCAA
CTGAGGTACTTAAAACTTTAAGCAATTACCATTGTGAATC-TTTTAGAGATCACCATGGTACTTACTACTAATAGTT---
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-------------------------------------------------------------------GGCCTATTCAAAA
CATATGGCTTTGTACATTCTAATAACACACATGATAAATTCAATTTCTGAAGTAAATTGAACCCTGTTCATCCATACATG
CTCAT------------------------------------------------------CAACTATTGATAT-TGCACAG
TGTTATACTGTGTGACATTTTGAGAA-------------AACTATTGATTTTGCATAGTGTTATACAAGCAGACATGCAA
GTACGGATGAAAAGGAGGAAAATA-----------AAAAAGGTAAATTAATTAAACAAGAAAAGAAAAAAGAAAAAGGTC
CGCATGAATCTCCGTGTGAAATCAAATGGTGGTAGAGGTTATAGTACGAAACTTTGTTGATTCTACTCGAGAATCAGCAA
AAAGTAATTACATATGGCAGGACCAACTAATAAAAGCCGGATCGGATTTTGAAGAGTTTTAGCCGTGCTTTTA-------
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----------------CAAAGGGGGTGGACTTATAATAAACGGGAAAAGCCACGCTGTCATTTCTGCAGCAAACATCTCG
TCTCAATCCCCGCGGATAAATACGCCCGCGTACAAC--TCACCTTCCCGTTCCCCTGTTAAACCCCACCGCACCGCACCG
CACCTAT-----------CCCGCACCGTAGCAACAGAAAGAAAAAGATCTCC---TCCG------CCGCCGCCGCCGCCG
CAATGCAGCGCCTCTCCATCGGATCGCCGGGCTCGAGGCCCAGCCTGGATGCCGCCCCCGCCGCGGCCGCAGACGAGGCG
GACGAGAAGGCGACGGGGAAGGCGGCCAGGGCGGCCGCGCCGGACAAGTCCATCCACCTCGTCCCCCTCCTCACGCTCCT
CTGCCTCCTCGTCCTCTTCCTCTTCTCCCACGACCCGGCCAGTTCCCGCGCCATCGCCGGTAAGTAGCCAGCCAAACCTT
CGCTCCACTCCCTTTCCCTCGCCGGCACTGCTCCTAACGCCGCTCGCCCGTCCGTGCAGATTCGCCGCCCGTCCTGGCCG
TCACCGCCCGCTCCCTCGAGGCCACAGGTAGGCGATAAGACTCGCGACGAACACC-----------CTGCGTCCCGTTCC
CCCATCTCTTGCCTCGTTTGATTTTCTCTCTCTCTCTCTCTCTCCTTTGTTCGTTCCTGCAGCGGACACGACGCCGTCGG
TGGCGCGGGGCGGCGCGCACCAGCGGCTGAAGGCGGACCCGACGCCGCGCCGCGGGCGAAGGCTGGGAGCGCCGCGGCGG
TGACGGCGACGGCGACGGCGCGGAATTGGGGAACGGGAAGGCTAAGGCTGGCCCACGTCCGCGCAAGCAGCTAGCCGTTG
GAACG---TACGACGCGTCCTCAGCGCACGTCTCTTTCTTCCCTCCACCCCCGTGCTGCGTCGTTGGTGGAACTTGAATG
GCCGCGAGCGTTCGTCTTCCTGTGGCCTCTA-GAAATTGGGATTAGATTACCAGCCGCCCGTCGCAATCGTCAATCACCA
TGTGTTCATACCCCATCGTCATTCTTTTCCCCCTTCGGTTGCTCACCTGCTATTGATTCTGTAATTCTTTTTCCGTAATT
GG---TAGTACTGATGAGGAAATTGATTGATAGAATTCTGGTTCAGGTGCGTCGGATTGTCCATCGTCTTTGAACTGGTT
TCTGTTTCTGCCTTTTGGGTT----------------------------------GAATGAATGGGCTGGTTCCAGC---
---TTTCGGGGCCAAGCTGCCGCAGGGGATCACGAGAAAATTTATTGCTCGGCAGCGGTAAAGTGGACAGACAGG-----
--CCACAACATACTGGGCGCTGGTACATTCACGTTGCTGCTG-----CTAGTGCAACTAGGCCTGGCTGGCTTGGC----
--TTGGCTTGGACTGGGTCCACTGG--------------------------AAGCCTCAGGTGTAACGACTATATATGTC
CAAGCTGGAG----------------------------------------------------------------------
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---------------------------------------------------------CCAATGCCCTCCATCTCTCACTT
TTACAAGATTCAGAGAGACATTTACAGAATGCAAGTAATTAACCTTGAAAATGATCTTTCTATAAGTATGTGCATCTTTC
TATAAGTATAAGCTCTGCCACCGTGGGTATGCGATATGCCCGATCACATTTGCAAACAGATTTACCATCACGGATCGAGG
GTGGTAGGCTCGCAGCGGGGCAGGCTAGCAGACAATAGCATAGTGCAAATGTAGCGTTAATTCTAGACGAGTGATGAGCA
AATTTTGGACTAATGGATGACTTTGGCGGGACAAAGAGGGATGCCGCTTGCACCCCTACACGCAGGGCAAACTGCATCTC
CATGGACACTAGCACAAAGCTTCGTA---------------TCTGAAACAAAAGCAAGCAAGAAAATGAAAAAAGAATAC
GGCA------------------------------------------------------------------------TGGC
AACAGCAGGAGATCCATATACAAGTGCTATCAGCAGCGC---------ACCCCATTC-CCCCGGCAAGTCACATCCACCG
ACAAGGAGCTTTAAACACACAACACAAATGCTGGCTGCCGCTAGCTAGCTCAGCTAAACAACAACTTACAAATGGTGAAT
ATATGCATTATTAGTTCTTCAAACAAACATTTGTACCTGCATGGTAAACAAACAGAGCACGCATAACCTAACACAAATGA
CCACGAAAATGTGAAAA--CTGGGGAAGGCACCTAAGAATCTAAACAATTCCGCAGAAGGGATCT
>chr1A_24
-----------------------TTCATTTATTCCATTAATGGTGACACTATATCTCCATATG--GTCCATTCCGTAGTA
ACACTATATCTCCATATAATCCAATTGCTATATCTCCATATAGTCAATATTTATTTGGAACTACATCA----------AT
AAACTTTTATTGATCCATATTATATTATATTCAAAA-CTTCTCAAGTCTCTAACTATGTCATTTATAGATCCACAATTT-
ATGTTCATTTCT-AAAACTATTTCAAAATTTATAGCCCGATAGTT------TATCAGTCATGAAGTTGTCTTGTGTAAAT
TTTACAACAATTATTTTGTGTAAC-CTTCACATCAATCTCTTCATCTCCCCTAAATACAAGAAGCAAAGCTCTCATCCAA
CTGAGGTACTTAAAACTTTAAGCAATTACCATTGTGAATC-TTTTAGAGATCACTATGGTACTTACTACTAATAGTT---
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-------------------------------------------------------------------AGCCTATTCAAAA
AGTATGGCTTTGTACATTTTGATAACACACATGATAAATTCAATTTCTGAAGTAAAGTGAACCCTATTCATCCATACATG
CTCAT------------------------------------------------------CAACTATTGATTT-TGCATAG
TTTTATATTGTGTGACATTTTGAGAA-------------AGCATATT---------------------------------
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>chr1D_24
-----------------------TTCATTTGTTACATTAATGGTGACAGTATATCTCCATATA--GTCAATTTTATAGTA
ACACTATATCTCCATATAGTCCAATTGCTATATCTCCATATAGACAATATTTATTTGGAACTACATCA----------AT
AAGCTTTTATTGATCCATATTATATTATATTGAAAA-CTTCTCAAGTCTCTAACTATATCATTTATAGATCCACAATTT-
ATGTTCATTTCT-AAAAGTATTTCAAAATTTATAGCCCGATAGTT------TATCAGTCATGAAGTTGTCTTGTGTAACT
TTTACAACAATTATTTTGTGTAAC-CTTCGCAACAATCTCTTCATCTCCTCTAAAGACAAGAAGTAAAGCTTTCTTCCAA
CTGAGGTACTTAAAACTTTAAGCAATTACCATTGTGAATA-TTTTAGATATCACTATGGTACTTACTACTAATAGTT---
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-------------------------------------------------------------------AGCCTATTCAAAA
CATATGGCTTTGTACATTTTGATAACACACATGGTAAATTCAATTTCTGAAGTAAATTGAACCCTATTCATCCATACATG
CTCAT------------------------------------------------------CAACTATTGATTT-TGCACAG
TGTTATACTGTGTGGCATTTTGAGAA-------------A----------------------------------------
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>chr1D_24
-----------------------TTCATTTGTTACATTAATGGTGACACTATATCTCCATATA--GTCCATTTTATAGTA
ACACTATATCTCCATATAGTCCAATTGCTATATCTCAATATAGTCAATATTTATTTGAAACTACATCA----------AT
AAACTTTTATTGATCCAGATTATATTATATTGAAAA-CTTCTCAAGTCTCAAACTATATCATTTATAGATCCACAATTTT
A---TCATTTCT-AAAACTATTTCAAAATTTATAG-CCGATAGTT------TATTAGTCATGAAGTTGTCTTGTGTAACT
TTGACAACAATTATTTTGTGTAAC-CTTTACAACAATCTATTCATCTCCTCTAAG-ACAAGAAGCAAAGTTTTCGTCCAA
CTGAGGTACTTAAAACTTTAAGCAATTATCATTGTGAATCTTTTTAGAGATCACTATGGTACTTACTACTAATAGTTTTT
TTTATAGAAAAGGAGGATGACCCCCGGCCTCTGCATCTGGGAGATGCATGCGGCCACTTTCTAGATTATTCTCGAGGACC
TTACAATGTATTACAACAATATGCCTGAATCCGCCATCTTGGCATCAAATGCCACTACTCCTATCCATATGATGAAGGGG
CGCTAGCTGGGCCAAATACCCAGTCCACTCACCTAAGCCTATCATCAAAAGCCAGAAGCCCCAGCCGAGCCACATACCGG
GTCTGGGGCATGAACTGGTCTGACGCACTCACATGTGTCGTCGCCGCCATCTTCCGCTGGTCCGTCTTCAGAGCAGATAT
TGAGGCTTCTACCTTGTCAGGCCACTCGGCCATCGACGCCACCATGACGTCAGACAACAACCCCCTCCTGCGCGAGTCCA
GCACCGCGCATCGGGTGCCGAGTCTCCATTGCACCACGCCGTCGAGATCCGCCGTCATCAATGTGCAGGATGAAGCACCG
CTCCACCAAAAAAAGCCGCCCACTGGTCCCTCGAACCCGTGTACGCCTCCAAGAATGACGCCCCCAAGGAGGAAACGACA
CCAACGCGCTGCCGTCATCTGATCTACTGATCTAGGGTTTCCCCCGGAGGTAGCAGATAGAGGTCTGGAGCTTCTCCACG
GCGAGGCCTTCAAGAAAGTAATGACACAAAAGAGTGCCGCCAACGCCGGTCTTGGCAACAAGCCGAGAACTAGGTTTTCA
CCCGAATCCGCTGAAGGAACCTCCATCAAGCATCGTGTGCACGGGTCGCCGCCGATCTGAGCCGCCGCACATTGAGGTCG
CACCGGCCCGATCAGATCTGTCCGGAGGGCAAACCACACATGGTGCCGACCCAACCAACAGGCCCTTCATGCCGCCACAG
AGGCGCCGGGGCCTGCACCACGCGCAGCCGCCCTGCCACCCATGCAGCCCAGGACGGCCAGCACCGCCGCATCCCGCCGA
CGGCGCGCGCCCACCAGATCCGAGCCGAAACGCCCCGATCCGCCGCCAAAACGGTCAGCCGCCGCTCCTCCACCGCGAGG
AAGAGAGGAGGGGGCCGCCGCTCCCTGGGGCCGCCGCCCCAGCATCCAGTGCCACCGCGCCGTAGAAGAGGCCGGAGGGC
CAGATCCACGCCGGCGTGCAGCTCCGCGACGCACGGCGCGCCGTCCAGGGCTGGCCTTCATGCGTGACGGGAGAGAAAAG
GCCCGCCGCCGCCGGCAGCCGCACGGGCTTTGCCCGGCGGGGACGCCCGACGGCGGCGAGGGGGAGGGAGCAGGAGGGGG
TGGCGGCGGCGGCGAGGTTAGGTCACCCGAGCCGCCCCCCTGGAGAGCGACGCGGGTGCGGGGAGTTAGCCTATTCCAAA
CATATGGCTTGGTACATTTTGATAACACACATGATAAATTCAATTTCTGAAGTAAGTTGAACTCTATTCATCCATACATG
CTCAT------------------------------------------------------CAACTTTTGATTT-TGCACAG
TGTTATATTGTCTGACATTTTGAAAATGCAGTTTGAGAAAACGATTGATTTTGCACAGTGTTATACATGCGGACATGCAA
GCACGGATGAAAAAAGTGGGAAATGAAAATAAAATAAAAAGGTAAATTAATCAAAGAGGAAAAGAAAAAGGAAA--GATC
TGCATGAATCTCCGTGTGAAATCAAATGGGGGTAAAGGTTAG---ACGAAA-TTTGTTGATTCTACTCGAGAATCAGCAA
AAAATAATTACATAGGGCAGGACCGACTAATAAAAGCCGAACCGGATTTTGAAGAGTTTTAGTCGTGCTTTT--------
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>chr1B_24
-----------------------TTCATTTGTTACATTAATGGTGACAATATATCTCCATCTA--GTCCATTTTATAGTA
ACACTATATCTCCATATAGTCCAATTGCTATATCTCAATATAGTCAATATTTAATTGAAACTACATCA----------AT
AAATTTTTATTGACCCAGATTATATTATATTGAAAA-CTTCTCAACTCTCTAACTATATCATTTATAGATCCATAA-TTT
A---TCATTTCT-AAAACTATTTCAAAATTTATAGTCCGATAGTT------TATCAGTCATGAAGTTGTCTTGTGTAACT
TTTACAACAATTATTTTGTGTAAC-CTTCACAACAATCTCTTCATCTCCTCTAAAAACAAGAGGCAAAACTTTCGTCAAA
CTGAGGTACTTAAAACTTTAAGCAGTTTTGACATATATTATGACTAGATGC-----------------------------
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-----------------------------------------------------------------------------AAG
TACATGCAATTGTATT-TGTGCGTGGTGGATGGACATGCAGTTGCGCGTGGTCATTCAGCGTGTAACCGTGAGATGCATA
ACCGACACGTTGTTGCGCACTGATACGTGAACATGCAACTATAGTTATGCGCGGACGCGCAACTATAGACTTGTATG---
----------------------------------------------------------------ACAATCGGGCATGCAA
GCACGGATGAAAAGGAGGAAATA--AAAATAAAATAAAAAGGTAAATTAATCAAACAGGAAAAGAAAAAGAAAA--GGTC
CGCATGAATCTCCGTGTGAAATCAAA----------GGTTGG---ACGAAACGCTGTTGATTCTACTCGAGAATCAGCAA
AAACTAATTACATAGGGCAGGACCGACTAATAGAAGCCGGACCAGATTTTGAAGAGTTTTAGCCGTGCTTTTAGGGGTGT
TTGGTTCAGAAGTCATAGGACTTTTTCTAGTCCCAGAGAGTAATCAAAAAAGACTCTCCAGTAAAGTCTTTTTTTAGTTT
CTGTAGAAAAAGTCCCTCCCGTTTGGTTTCTAGAGACTTTTTAGGGACTTTTTTTATTCTTTCGGACTAAAAAGTCCCTG
AATCAAGCACCCCTTACAAAGGGGATGGACT---AATAAACGGGAAAAGCCACGCTGTCATTTCTGCAGCAAACATCTCG
TCTCAATCCCCGCGGATAAACACGCCCGCGTACAACAATCACCTTCCCGTTCCCCTGTTAAACCCCATCCCACCGCACCG
CACCGCACCGCACCTATCCCCGCATCGTAGCAACAGAAAGAAAAAGATCTCC---TCCTTCTCCTCCTCCGCCGCCGCCG
CAATGCAGCGCCTCTCCATCGGATCGCCGGGCTCGAGACCCAGCCTGGATGCCGCCCCCGCCGCGGCCGCGGACGAGGCG
GACGAGAAGGCGACGGGGAAGGCGGCCAGGGCGGCCGCGCCGGACAAGTCCATCCACCTCGTCCCCCTCCTCACGCTCCT
CTGCCTCCTCGTCCTCTTCCTCTTCTCCCACGACCCGGCCACTTCCCGCGCCATCGCCGGTAAGTAGCCAGCCAAACTTT
CGCTCCACTCCCTTCGCCTCGCCGGTCCTGTCCCTAACGCCGCTCGCGCGTCCGTGCAGATTCGCCACCCGTCCTGGCCG
TCACCGCCCGCTCCCTCGAGGCCACAGGTAGGCGATAAGAGTCGCGACCAACACAGCAGTCTCCGTCTGCGTCCCGTTTC
CCCTTCTCTTACCTCGTTTGATTTTC----TCTCTCTCTCTCTCCTTTATTCGTTCCTGCAGCGGACACGACGCCGTCGG
TGGCGCGGGGCGGCGCGCACCAGCGGCTGAAGGCGGACCCGACGCCGCGCCGCGGGCGAAGGCTGGGAGCGCCGCGGCAA
T------GACGGCGACGGCGCGGAATTGGGGAACGGGAAGGCTAAGGCTAGCCCACGTCCGCGCAAGCAGCTAGCCGTTG
GAACG---TACGACGCGTCCTCAGCGCACGTCTCTTTCTTCCCTCCACCCCCGTGCTGCGTCGTTGGTGGAACTTGAATG
GCCGCGAGCGTTCGTCTTCCTGTGACCTCTA-GAAATTGGGATTAGATTACCAGCCGCCCATCGCAATCGTCAATCACCA
TCTGTTCATACCCCATCGTCATTCTTTTCCG--TTCGGTTGTTCACCTGCTATTGATTCTGTAATTCTTTTTCCGTAATT
GGTAGTAGTACTGATGAGGTAATTGATGGATAGAATTCTGGTTCAGGTGCGCCAGATTGTCCATCGTCTTTGAACTGGTT
CTTGTTTTTGCCTTTTGGATTGAAATGAATGGGACGGGCGGGTAAACGAACGAGCGAATTAATGAGCTGGCTCCAGCGTT
CGATTTCGGGGCCAAGCTGCCGCAGGAGATCACGGGAAAATTTATTGCTCGGCAGCAGTCAAGTGGACAGACAGACCACA
ACCCACAACATACTGGACACTGGTACATTCACGTTGCTGCTGCTGTGCTAGGGCAGCCAGGCCTGGGCGCCTGGCTGGTT
AATTGGCTTGGATTGGATGCTCTGGCTCAACTTGAAAATGAACAGAGCCCCAAGCCTCAGTTGTAACGATTATACCCAAG
TTGGGGACAAATGCCCATTTCATACGGAAACCAATATTCAAAGAAAACTTTATGGAAACTACATTTTAAAAAAATTAAGA
AAACTGGAAAAAAATATGGGATGCTAAGAGGGTGATGTTTTCTTACCACACAAAACGTCAAGTTGAAACACATTACAAGA
TGTGAACTACTATGAAAAAATAATAATTCAGCACTGACTAGTGACGTTACTATTTGGCACTATTCAATGCTGATTTTGTT
ATTTTCGCCGCTCACATTATATCCCGTAATGTGTTTGAACTTGGAATTTTTCATGGCAATATAACACCACCCTCTTCTTT
TTTTTCTTTTTTTTGCGAAAAATAACATCACCCTCTCAACGTCCCGTATTTTTTAGAATTTTTTGAAACTTCAAAACATC
TTTTTCATGTAGTTTTCACCGGTTTTCATCAAATGTTGGTTTCTATATGATATTTTCCCTATGCCCTCCATCTCTCACTT
ATGCAAGATTCGTGGTGATGTTGCACGGTCAACTTTGCGTCTCACGCATACACGCTGCAAACACAGATT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AACTGCATCTC
CATGAACACTA---CCAGACTACGTACAGTACAAAGCTTCGTCTGAAACAAAACCAGGCAAGTAACAGAAGTGT------
----------------------------GAGTGGCAATCGTCGGTGGTGCGCCGGGGAGCACAGGCAACTGAGCAGTAGC
CACAGCACGAGATCCATATACAAGTGCTATCAGCAGCGC---------ACCCCATTCCCCCCGGCAAGTCACATCCACCG
ACAAGGAGCTTTAAACACGAG-----AACGCTGGCTGCCGCTTGCTCAGG----TAAACAACGTCTTACAACTGGTGAAT
ATATGCATTATTAG---TTCAAACAAACATTTGGACCTGCATGGTAAACGCACAGAGCACGCATAACCAAACACAAATGA
CCAAGAAAATGTGAAAAAACTGGGGAAGGCACCTAAGAATCTAAACAATCCTGCAGAAGGGATCT
>chr3B_24
-----------------------TTCATTTGTTACATTAATGTTGACACTATATCTCCATATATAGTCCATTCTATAGTA
ACACTATATCTCCATATAGTCCAATTGTTATATCTCCATATAGTAAATATCCATTTCGAACTACATCATAATTAATCAAT
GAACTTTTATTGGACTAGATTACATTCTATTGAAAATATTCTCAAGCCTCAAGCTATACCATTTATAGATCCACAATTT-
TTGTTCATTTCCGACAACTATTTCAAAATATAGAGCCTGATAGTT------TATCAGTCATGAAGTTGTCTTGTGTAACT
TCTACAACAAATATTTTGTGTAAC-CTTTACAACAATCTCTTCATATCCTCTAAAGACAAGAAGCAAAGCCTTCGTCCAA
TCAAGGTACTTAAATCTTTAAGAAATCACCCTAGTGAATC-TTTTAGACATCACTATGGTACTTACTACTAAC-------
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---------------------------------------------------------------AGTTAGTCTATAGGAAA
CATATGGCTTTGTACA-TTTGATAACACACATGATGAATTCAATTTCTGTAGTAGATTGAACTTTATTCATCCATACATG
CTCAT------------------------------------------------------CAACTATTGATTTCTGCATAG
TGTTATGCTATGTGACATTTTGAGAA-------------AACATT-----------------------------------
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-----------------------------------------------------------------
>chr3D_24
-----------------------TTCATTTGTTACATTAACGGTGACAATATATCTCCATATATAGTCCATTCTATAGTA
ACAATATATCTCCATATAGTCCAATTGTTATATCTCCATATAGTCAATATCCATTTCGAACTACATCATAATTAACCAAT
AAACTTTTATTAAACCAGATTACATTCTATTTAAAAACTTATCAAG--------------------------------T-
TTGTTCATTTCCGAAAACTATTTCAAAATATATAGCCCAATAGTT------TATCAGTCATGAAGTTGTCTTGTGTAACT
TTTACAAAAAATATTTTGTGTAAC-CTTTACAACAATCTCTTCATCTCCTCTAATGACAAGAAGCAAAGCCTTCATCCAA
TCGAGGTACTTAAATCTTTAAGCAATCACCCTAGTGAATC-TTTTAGAGATCACTATGGTACTTACTACTAGC-------
--------------------------------------------------------------------------------
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---------------------------------------------------------------AGTTAGCCTATACGAAA
CATATGCCTTTGTACA-TTTGATAACACACATGATGAATTCAATTTCTGTAGTAAATTGAACTTTATTCATCCATACATG
CTCAT------------------------------------------------------CAACTATTTATTTCCGCATAG
TGTTATGCTATGTGACATTTTGAGAA-------------AACATT-----------------------------------
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-----------------------------------------------------------------
>chr2A_24
-----------------------TTCATTTGTTACATTAATGGTGACACTATATCCCCATAT--AGTCCATTCTATAGTA
ACACTATATGTCCATATAGTCCAACTGCTATATCTCCATATAGTCAATATCCATTTGGAAATACATCGCAATTTATCAAT
AAGCTTCTATTAATCCAGATTATATTCTATTGAAAA-ATACTCAAGTCTCAAGTTATATCATTTATGGATCCACAATTT-
ATGTTCATTTTAGAAAATTATTTCAAAATT-ATAGCCCGGTAGTTAATTCATATCAGTCGTGAAGTTGTCTCGCGTAACT
TCTACAACAAATATTTTGTGTAACTCTTTACAACAATCTCTTCATCTCCTCCAAGGACAAGAAACAAAATCTTCATCCAA
TTGAGGTAATTAATA-TTGAAGTAATTACTCTAGTGAGCCTCTCTAGAGTCCCATAAGGTATTTACTCTTAAC-------
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---------------------------------------------------------------GATTTGTC-ATATGAAG
CATATGCCTTTGTACA-TTTGATAGAATCTATGATTAATTCAATCTCTGAAGTAGATTGAACTTTATTCATCTACACATG
CTCAT------------------------------------------------------CAACTATTGATTTCTCCATAG
TGTTATGCTAAGTGAC----------------------------------------------------------------
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>chr1D_888
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----------------------------------------------AAGCCACGCTGTCATTTCTGCAGCAAACATCTCG
TCTCAGTCCCCGCGGATAAATACGCCCGCGTACAACAACCACCTTCCCGTTCCCCTGTTAAACCCCACCGCAGCGCACCG
CACCTAT-----------CCCGCACCGTAGCAACAGAAAGAAAAAAATCTCCTCCTCCTTCTCCTCCGCCGCCGCCGCCG
CAATGCAGCGCCTCTCCATCGGATCGCCGGGCTCGAGACCCAGCCTGGATGCCGCCCCCGCCGCGGCCGCGGACGAGGCG
GACGAGAAGGCGACGGGGAAGGCGGCCAGGGCGGCCGCGCCGGACAAGTCCATCCACCTCGTCCCCCTCCTCACGCTCCT
CTGCCTCCTCGTCCTCTTCCTCTTCTCCCACGACCCGGCCACTTCCCGCGCCATCGCCGGTAAGTAGCCAGCCAAACGTT
CGCTCCACTCCCTTCCCCTCGCCGGCCCTGCTCCTAACGCCGCTCGCGCGTCCCTGCAGATTCGCCGCCCGTCCTGGCCG
TCACCGCCCGCTCCCTCGAGGCCACAGGTAGGCGATAAGACTCGCGATGAACACGGCAGTCTCCGTCTGCGTCCCGTTCC
CCCATCTCTTACCTCGTTTGATTTTC----TCTCTCTCCC------TTGTTCGTTCCTGCAGCGGACACGACGCCGTCGG
TGGCTCGCGGCGGCGCGCACCAGCGGCTGAAGGCGGACCCGACGCCGCGCCGCGGGCGAAGGCTGGGGGCGCCGCGGCGG
T------GACGGCGACGGCGCGGAATTGGGGAACGGGGAGGCTAAGGCTGGCCCACGTCCGCGCAAGCAGCTAGCCGTTG
GAACGTACTACGACGCGTCCTCAGCGCACGTCTCTTTCT---CTCCGCCCCCGTGCTGCGTCGTTGGTGGAACTTGAATG
GCCGCGAGCGTTCGTCTTCCTGTGGCCTCTATGAAATTGGGATTAGATTACCAGCCGCCCATCGCAATCGTCAATCACCA
TGTGTTCATACCCCATCGTCATTCTTTTCCC--TTCGGTTGTTCACCTGCCATTGATTCTGTGATTCTTTTTCCGTAATT
GG---TAGTACTGATGAGGAAATTGATGGATAGAATTCTGGTTCAGGTGCGTCGGATTGTCCATCGTCTTTGAACTGGTT
TTTGTTTTTGCCTTTGGGGTCG-AATGAATGGGACGGGCGGTTAA---------CGAATGAATGGGCTGGTTCCAGC---
---TTTCGGGGCCAAGCTGCCGCAGGGGATCACGAGAAAATTTATTGTTCGGCAGCAGTAAAGTGGACAGACAGG-----
--CCACAACATACTGGACGCTGGTACATTCACGTTGCTGCTG-----CTAGTGCAACTAGGCCTGGCTGGCTTGGC----
--TTGGCTTGGACTGGGTCCACTGG--------------------------AAGCCTCAGGTGTAACGACTATATATGTC
CAAGCTGGAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CCAATGCCCTCCATTTCTCACTT
TTACAAGATTCATAGAGACGTTTACAGAATGCAAGTAATTAACCTTGAAAATGATCTTTCTATAAGTATGTGCATCTTTG
TATAAGTAAGCTA--TGCCACCGTGGGTATGCGATATGCCCGATCACATTTGCAAACAGATTTACCATCACGGATCGAGG
GTAGTAGGCTCGCAGTGAGGCAGGCTAGCAGACAATAGCATAGTGCAAATGTAGCGTTAATTCTAGAGGAGTGATGAGCA
AATTTTGGACTAATGGATGACTTTCGCGGGACAAAGCGGGATGCCGCTTGCACCCCTACACGCAGGGCAAACTGCATCTC
CATGAACACTA---CAAAGCTTCATC---------------TCTGAAACAAAAGCAAACAAGAAAATGAAAAGGGAATAC
AGCAAGGAACAGAAGCAAGAAGAGATGCGAGTGGCAATCGTCGGTGG--CGCCGGGGAGCACAGGCAACTGAGCAGTGGC
CACGGAACGAGATCCATACACAAGTGCTATCAGCAGCAGCGGCAGCGTACCCCATTCCT-CCGGCAAGTCACATCCACCG
ACAAGGAGCTTTAAACACACG-----AATGCTGGCTGCCGCTAGC-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSS-----------------------------------S---------------------
-----------S--------------------------------------------------------------------
-----------------------------------------------S-------S------------------S-----
-------------S-------------------S----------------------------------------------
----------------------------------------------------S---SS----------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------------S-S--------------------------------------------S--------------
----------------------------------------------------------------------S---------
------------------------------------------S------------S--------------S---------
-S--------------------SS---------------------------S-----S-----------S----SS----
-----------------------------S----S------SSSS-----------------------------------
---S----------S---------S----------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S------SSS----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-------------------------------------S--------------------------------S---------
--------------------------------------------------------------------------------
-----------------------------------------S-----------------------------------S--
--------------S-----------S--------------------S--------------------------------
------------------------------------------------------S-------------------------
----------S---------------SSSS--------------------------------------------------
--------------------------------------------------------------------------------
-SSSSSS-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------------------------------SS--------S--------------------------------------
---------------------------S----------------------------------------------------
-S-----S------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S------S-----------------------------------------------------------S
--------SSSSSSS-----------------------------------------------------------------
--S------------S-S-------------------------------------------------S------------
------------------------S-----------S-------------------------------------------
----S------SSS----------------------------------------------------------SS------
S-------------------------------------------------------------------------------
S------S------------------------------------------------------------------------
--------------------SSSSSS--------------------SSSSSSSS--------SS-------S--------
--------------SSS----------------S---------------SS-----------------S-----------
---S---------------------------------------------S-S-------------
>forward_2505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CCGTGCTTTTACAAAGGGGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3857
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------GCGCTGGTACATTCACGTTG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
