>input_sequence_64496
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---------------------------------------------------------------------------ATGAC
GCACAGGAAGGCAGCAGGTGGATCAACCGACTCCACCATGGGGGCCTGGTTCTCTTTCCCGGGTAACGACGGGCGTGCGA
TCCCAAGAGAGTGGGCAGTTGCAGCTGGATTGGATGCCACTCCCTTCAACATGTGTCGACTGAAGAACGTGGGTCGCCCC
GGCCCGCGCACACCAGAGTATGCAAATTTTACTTCTTTGCTTTG----ATTGG-------------------------TT
GTGTTGAATCAATGAAACGGTCCCTGATTTTTCT------GTTTGATGACAGAGAATTCGACGCCTACCACATTCGCAAT
CTCGCGCGCTGGGCCCTCCAACATTACAACTCCAGCCACCTGGTACAATTCCGGCTAGTGTTTCATCCATCTCGATTCTT
GCAGCGCATACATGTCCTGTTTTACTTGGTTATGCTTGTAATAATA----------------TGTGTGTGTGTGTCTATG
TGTGCAGGGTGCTGAGTTCCGGTGCCCTGATCAGCCCACCACCGAGGCGAAGGCAGCCTGTGTTGGCTTCAGGGAAGATC
TCTGGTACCACCTCAACTTCTTGGCCTGCCTAAAGGATGGCGGCGACGAGCAGAGCTTCTTCGCCGAGCTACGCTATGTC
CGGTGTTCCAGCACAATAATCATCGAAACATGCACCATCTTAGGTACGCAGATATGTGTGGTTCTATTAATGTTCATGTT
ACACAACCCAGTTGATCCTAGCTGACCCCCCG----CCCCCGCGCCT---------------------------------
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------------CCCTCTCCAGAAAAACCGTTTTGCCCCTTTAGAAGCAGTTGCACATTGTGTCCAGATGAATCCAAGAT
TTTGCATCCAAGCGATGTGGAGCTTGGGTGTGGGAAGGAGGGCCACCAAGAGGAATTCTTCCGCGAGAGGTGTGGATGGA
ACGGACATGTAAAGGAATTTTTCAGTCCAAGGGAGATGCTAGCGATACCCTCCAAGTTAGGAGGACCAGTGCCTCGATAT
AGACTGGAGTAA--------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G350600
TGTTTACTCTTCCCCTTCCACCCCTGGCGGATCCCGCCGT---------------GCCGTACCTTAGCGTCGCCGCCGCC
GCCGCCGCCGCCGCCGCC----CCTCAATCGCCTCCCACCCACCAACACTGGGGACGCGCGTCGCCGCC---GCCGCCGC
CATCGCCGTTCCCCTTCTTCGTCGACTCCCAGGACATCGCGCCAGGGCTGTCCTGCTACCGTCTCCCTCCTTTCGAGGTA
CTCCCATCATCAGTTCCCCTTGTTGTTAAACCAATCCGTCTCACCAGGAGAAACAATCATCCGATTAGGAGTTCGATTAG
GAGTTGCCGATCGATTAGGAAGTACCTCTCT--ATATGTATATCTACAGATCCCATTGGTTCGGCGATCGATCTTGACAA
CGATGAAAA----TAGCATGCTATTTCGGCGTTTTAACCTCC--------------------------------------
------------------------CTATAGACAATTTACTGCAAAATAGAGCTCCTGCCATGGATAATCTACTGTAATAT
CTCA------CCTTATGGAAGTCTGTTTCCTTCTCTTGATTGAAGTAGAACATGGTTTGGTGCTTTATGCAAGTTTGTTT
CCTTCTCTGCTTTGGAGCATCATGCCATCCGAACATAATACTAGCTAAGGAGGTTTATGCAAGATTGTTTATGCAATATC
ATTCTAGTAGTTTTTCCTTTAGTTTCCTTCCCTTTTTGGATGCAAGTTTGTTTCCTTTAGTTT-----------------
--ATTGCATGGTACAACTACAAATTTTGATGTAGTTTAACCATTGCAGGTCATGCCCTAGTTTAACCATTGCATGTAATT
TAACCATTGAGTGTACGTGCCCTGTTTCCCCTGTTTTTCCTGTAGTTTAACCAGTGCTTAGAGCAATAGACTGATCTCCT
TGTAACTACAAATTTTAGATGTTGAACTCCTTAATTTCTGGGATATATTTGGCATATTTTTTTTCACAACGCTATTTTGA
ATATAGGATGCTATAACCGATATAGCATTTGGAGAAGGGCCACACTATTTTTTACATTGATCTCGGCACCGACCGATGAC
GCACAGGAAGGCAGCAGGTGGATCAACCGACTCCACCATGGGGGCCTGGTTCTCTTTCCCGGGTAACGACGGGCGTGCGA
TCCCAAGAGAGTGGGCAGTTGCAGCTGGATTGGATGCCACTCCCTTCAACATGTGTCGACTGAAGAACGTGGGTCGCCCC
GGCCCGCGCACACCAGAGTATGCAAATTTTACTTCTTTGCTTTG----ATTGG-------------------------TT
GTGTTGAATCAATGAAACGGTCCCTGATTTTTCT------GTTTGATGACAGAGAATTCGACGCCTACCACATTCGCAAT
CTCGCGCGCTGGGCCCTCCAACATTACAACTCCAGCCACCTGGTACAATTCCGGCTAGTGTTTCATCCATCTCGATTCTT
GCAGCGCATACATGTCCTGTTTTACTTGGTTATGCTTGTAATAATA----------------TGTGTGTGTGTGTCTATG
TGTGCAGGGTGCTGAGTTCCGGTGCCCTGATCAGCCCACCACCGAGGCGAAGGCAGCCTGTGTTGGCTTCAGGGAAGATC
TCTGGTACCACCTCAACTTCTTGGCCTGCCTAAAGGATGGCGGCGACGAGCAGAGCTTCTTCGCCGAGCTACGCTATGTC
CGGTGTTCCAGCACAATAATCATCGAAACATGCACCATCTTAGGTACGCAGATATGTGTGGTTCTATTAATGTTCATGTT
ACACAACCCAGTTGATCCTAGCTGACCCCCCG----CCCCCGCGCCT---------------------------------
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------------CCCTCTCCAGAAAAACCGTTTTGCCCCTTTAGAAGCAGTTGCACATTGTGTCCAGATGAATCCAAGAT
TTTGCATCCAAGCGATGTGGAGCTTGGGTGTGGGAAGGAGGGCCACCAAGAGGAATTCTTCCGCGAGAGGTGTGGATGGA
ACGGACATGTAAAGGAATTTTTCAGTCCAAGGGAGATGCTAGCGATACCCTCCAAGTTAGGAGGACCAGTGCCTCGATAT
AGACTGGAGTAACCATGATTTACTCCTACTTTCAGTTCAGTTGTAATGTTATA---CTACTTTTAGCCTTGTAAATTTAT
TATTTCCTATCGTCAATGCATTGGGGGTACAAGCTTTGTGTTTTCTCTAGAAGAAATGGATCTCCACGAGTGAATCTGTG
AGAAATTAAATTTGTGGCAGTTTTGGCACAAAGAAGTAAGCCTTTCGTTTCACCTCTAGGTTGTTCAATGTAAACAATGC
ATTCCGTAAAATTATGGACTATACAAGCTTTGCGCACGTAGAACTTTCTTTTCTTTGTTATTACTGAGACTGTTTGA--G
TGTTTGCGTTGCCACGAAATAACACTTTTCATAG-AAAA-AATATACATCTATTGCAATCACTCGAGTGGTGACAAAAAA
CGTATGCTCGTTTTTCACCTCATGTGTAAAGATGTGCTCTCTGGAACGTGCCTTGCCCCAGCTCAATCTCGCCTCCAAAC
CCAT-------TGTGACATTCTCCTCATGTCTTACAAAACTTCCGTGACCTTGTTAGTGAAGCTGCCATGTCCTCCAACA
AAGGTCAGCACTCAGCAATGCATTTGACATGTCAACTTATGTGAGGATAATTTAGAAACATAAAACAACCCGTATTTTGT
AGACTGATGACCT-------------------------------TCCATTCATGGCCAGACAAAGCTCCTGCAGTTCTCT
AATAGGAAGCTAGTATACTTGAATGGCCTCCGGCGTCCATTGATCACCCATGGAGAAGAACTGGAGAGCTCAGCTATAGC
CAGAGCAGGTGGTAGTACCAATTACATGCTGCTGGTACCAATGGCAACTTGACCACTTCAAATTGGAGGGACTATTCAGA
CCAATTCCCATACTGTAAAG-CCTTT-TTTATGATATATCAGAGGTTTTGTGTGAAAAGGCCGTGATCTAAATCATGTGG
TCGGTT--------------------------------------------------------------------------
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---------------------------TGGACAGTGGCATTGCAAATGAGCTATGCTCTATGATTTCGTTTTGTTTACAC
CAGTGAGTGACCTATACCTTCCAATATATGGATTTGCCCG
>chr3D_1
TGTTTACTCTTCCCCTTCCACCCCTGGCGGATCCCGCCGT---------------GCCGTACCTTAGCGTCGCCGC----
--------CGCCGCCGCC----CCTCAATCTCCTCCCACCCACCAACTCTGGGGACGCGCGTCGGCGCC---GCCGCCGC
CATCGCCGTTCCCCTTCTTCGTCGACTCCCAGAACATCGCGCCAGGGCTGTCCTGCTACCGTCTCCCTCCTTTCGAGGTA
CTCCCATCATCAGTTCCCCTTGTTGTTAAATCAATCCGTCTCACTAGGAGAAACAATCATCCGATTAGGAGTTCGATTAG
GAGTTGCCGATCGATTAGGAAGTACCTCTCTCTATATGTATATCTACAGATCCCATTGGTTAGGCGATCGATCTTGACAA
CGATAAAAA----TAGCATGCTATTTCGGCGTTTTAACCTCC--------------------------------------
------------------------CTATAGACAATTTACTGCAAAATAGAGCTCCTGCCATGGATAATCTACTGTAATAT
CTCA------CCTTATGGAAGTCTGTTTCCTTCTCTTGATTGAAGTAGAACATGGTTTGGTGCTTTATGCAAGTTTGTTT
CCTTCTCTGCTTTGGAGCATCATGCCATCCGAACATAATACTAGCTAAGGAGGTTTATGCAAGATTGTTTATGCAATATC
ATTCTAGTAGCTTTTCCTTTAGTTTCCTTCCCTTTTTGGATGCAAGTTTGTTTCCTTTAGTTT-----------------
--ATTGCATGGTACAACTACAAATTTTGATGTAGTTTAACCATTGCAGGTCATGCCCTAGTTTAACCATTGCATGTAATT
TAACCATTGAGTGTACGTGCCCTGTTTCCCCTGTTTTTCCTGTAGTTTAACCAGTGCTTAGAGCAATAGACTGATCTCCT
TGTAACTACAAATTTTAGATGTTGAACTCCTTAATTTCTGGGATATATTTGTCATATTTTTTTTCACAACGCTATTTTGA
ATATAGGATGCTATAACCGATATAGCATTTGGAGAAGGGCCACACTATTTTTTACATTGATCTCGGCACCGACCGACGAC
GCACAGGAAGGCAGCAGGTGGATCAACCGACTCCACCATGGGGGGCTGGTTCTCTTTCCCGGGTAACGACGGGCGTGCAA
TCCCAAGAGAGTGGGCAGTTGCAGCTGGATTGGATGCCACTCCCTTCAACATGCGTCGACTGAAGAACGTGGGTCGCCCC
GGCCCGCGCACACCAGAGTATGCAAATTTTACTTCTTTGCTTTG----ATTGG-------------------------TT
GTGTTGAATCAATGAAACGATCCCTGATTTTTCT------GTTTGATGACAGAGAATTCGACGCCTACCACATTCGCAAT
CTCGCGCGCTGGGCCCTCCGACATTACAACTCCAGCCACCCGGTACAATTCCGGCTAGTGTTTCATCCATCTCGATTCTT
GCAGCGCATACATGTCCTGTTTTACTTGGTTATGCTTGTAATAATA--------------TGTGTGTGTGTGTGTCTATG
TGTGCAGGGTGCTGAGTTCCGGTGCCCTGATCAGCCCACCACCGAGGCGAAGGCAGCCTGTGTTGGCTTCAGGGAAGATC
TCTGGTACCACCTCAACTTCTTGGCCTGCCTAAAGGATGACGGCGACGAGCAGAGCTTCTTCGCCGAGCTACGCTATGTC
CGGTGTTCCAGCACAATAATCATCGAAACATGCACCATCTTAGGTACGCAGATATGTGTGGTAATATTAATGTTCATGTT
ACACAACCCGGTTGATCCTAGCTGACCCCCCG----CCCCCGCGCCT---------------------------------
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------------CCCTCTCCAGAAAAACCGTTTTGCCCCTTTAGAAGCAGTTGCACATTGTGTCCAGATGAATCCAAGAT
TTTGCATCCAAGCGATGTGGAGCTTGGGTGTGGGAAGGAGGGCCACCAAGAGGAATTCTTCCGCGAGAGGTGTGGATGGA
ACGGACATGTAAAGGAATTTTTCAGTCCAAGGGAGATGCTAGCGATACCCTTCAAGTTAGGAGGACCAGTGCCTCGATAT
AGACTGGAGTAACCATGATTTACTCCTACTTTCAGTTCAGTTGTAATGTTATA---CTACTTTTAGCCTTGTAAATTTAT
TATTTCCTATCGTCAATGCATTGGGGGTACAAGCTTTGTGTTTTCTCTAGAAGAAATGGACCTCCACGAGTGAATCTGTG
AGAAATTAAATTTGTGGCAGTTTTGGCACAAAGAAGTAAGCCTTTCGTTTCACCTCTAGGTTGTTCAATGTAAACAATGC
ATTCCGTAAAATTATTGACTATACAAGCTTTGCGCACGTAGAACTTTCTTTTCTTTGTTATTACTGAGACTGTTTGA--G
TGTTTGCGTTGCCACGAAATAACACTTTTCATAG-AAAAAAATATACATCTATTGCAATCACTCGAGTGGTGACAAAAAA
CGTATGCTCGTTTTTCACCTCATGTGTAAAGATGTGCTCTCTGGAACGTGCCTTGCCCCAGCTCAATCTCGCCTCCAAAC
CCAT-------TTTGACATCCTCCTCTTGTCTTACAAAACTTCCGTGACCTTGTTAGTGAAGCTGCCATGTCCTCCAACA
AAGGTCAGCACTCAGCAATGCATTTGACATGTCAACTTATGTGAGGATAATTTAGAAACATAAAGCAACCCGTATTTTGT
AGACTGATGACCTTCCAAAGCACCATATCTCCTCAGCAGATGCATCCATTCATGGCCAGACAAAGCTCCTGTAGTTCTCT
AATAGGAAGCTAGCATACTTGAATGGCCTCCGGCGTCCATTGATCACCCATGGAGAAGAACTGGAGAGCTCAGCTATAGC
CAGAGCAGGTGGTAGTACCAATTCCATGCTGCTGGTACCAATGGCAACTTGATCACTTCAAATTGGAGGGACTATTCAGA
CCAATTCCCATACTGTAAAA-CCTTT-TTTATGATATATCGGAGGTTTTGTGTGAAAAGGCCGTGATCTAAATCATGTGG
TCGGTT--------------------------------------------------------------------------
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---------------------------TGGACAGTGGCATTGCAAATGAGCTAT---------TTTCGTTTTGTTTACAC
----GAGTGACCTACACCTTCCAATATATGGATTTGCCCG
>chr2A_1
TGTTTACGCTCCCCCTTCCGGTCCTGGCGGATCCCGCCGT---------------GCCATACCTCAGCGTCGTCGC----
--------CACCGCCGCCGCCTCCTCAACCGCCTCCTACCCACCAACACTGGGGACGCGCGTCACCGCC---GCCGCCGC
CATAGCCGTTCCCCTTCTTCGTCGACTCCCAGGACATCGCGCTAGGGCTATCCTGCTACCGTCTCCCTCCTTTCGAGGTA
CTCCCATCATCAGTTCGCCTTGTTGTTAAATCAATCCGTCTCACTAGAAGAAACAAGTCTC------------CGATTAG
GAGTTGCCGATCGAT--------------CTCTATATGTATATCTACAGATCCCATTGGTTCGGCGATCGATCTCGACCA
ACTAAAAAAATACTAGCATGCTATTTCGGCGTTTTTAACCTCGCTATAGCGTATCTGAGAGTGCCATTTTAGCCATTTTA
TTACTTGCTATTACGCTAATCGTGCTATGGATAATCTACTGCAAAATAGAGCTTCTGACATGGATAATCGACTGTAATAT
CTCAGATTTTCCTTATGCAAGTCTGTTTCCTTCTATTGATTGAAGTAGCACATGGTTTGGTGCTTTATGCATGTTTGTTT
CCTTCTCTGCTTTGGAGCATCATGCCATCCGAACATAATACTAGCTAAGGAGGTTTATGCAAGTTTGTTTATGCAATATC
ATTCGAGCAGCTTTTCCTTTAGTTTCCTTCCCTTTTTGGAAGCAAGTTAGTTCCCTTCCCTGTTAATTCCTGTAGTTTCA
CCATTGCATGATACAACTACAAATTTTGATGTAGTTTAACCATTGCACGTCATGCCCTAGTTTAACCATTGCCTGTACA-
-----------------TGCCCTGTTT-CCCTGTTTTTCCTGTAGTTTAAGCAGGGCTTAGAGCAATAATCTGATCTCCT
TGTAACTACAAATTTTAGATGTTGAACTCCTTAA-TTCTGGGATATATTTGGCATATTTTTTT-CACAATGCTATTTTGA
ATATAGCACGCTATAACCTATATAGCATTTGGAGAAGGGCCACGCTATTTTTTACATTGATCTCAGCACCGATCAACGAC
GCACATGAAGGCAGCAGGTGAATCGACCGACTCCACCATGGGAGCTTGGTTCTCTTTCCCTGGTAACGACGGGCGTGCGA
TCCCAAGAGAGTGGCTGGTTGCAGCTGGATTGGATGCCACTCCCTTTGATATGTGTCGACTCAAGAATGTGGGTCGCCCT
AGCCCGCGCACACCAGAGTATGCAAATTTTACTTACTTGTTTGCTTCAATTGG-------------------------TT
GTGTTGAATCAATGAAACAATCCCTGATTTTTCT------GTTTGATGACAGAGAATTCGACGCCTACCACATTCGCCAT
CTCGCGCGCTGGGCCCTCCGACATTACAACTTCAGCCACCCGGTACAATTCCGGCTAGTGTTTCATCCATCTCGATTCTT
GCAGCGCATATATGTCCTGTTTTACTTGGTTATGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGCAGGGTGCTCAGTTCCAGTGCTCTGATCAGCCCACCACCGAGGCGAAGGCAGTCTGTGTTGGCTTCAGGGAAGATC
TCTGGTACCACCTCAATTTCTGGGCCTGCCTAAAGGACGATAGCGACGAGCAGAGCTTCTTCGCCGAGCTACACTATGAC
CGGTGTTCCAGCACAATAATCATCGAAACGTGCACCATCTTAGGTACGCAGATATGTGTGGTTCTATTAATGTTCATGTT
ACACAACTCGGTTGATCCTAGCTGATCACACCCCAACCCCCTCCCCT---------------------------------
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------------CCCTCTCCAGAAAAACCGTTTTGCCGCTCTAGAAGCGGTTGCACATTGTGTCCAGATGAATCCAAGAT
TTTGCATCCAAGCGATGTGGAGCTTGGGTGTGGGAAGGAGGGCCACCAAGAGGAATTCTTCCGCGAGAGGTTTGGATGGA
ACGGACATGTAAAGGAATTTTTCAATCCGAGGGAGATGCTAGCGATACCCTTCAAGTTAGGAGGACCAGTGCCTCGATAT
AGACTGGAGTAACCATGATTTACTCCTACTTTCAGTTTAGTTGTAATGTTCTA---CTACTTTTAGGCTTGTAAATTTAT
TATTTCCTATCGTCAATGCATTGTGGGTACAAGCTTTGTGTTTTCTCTAGAACAAATGGACCTCCACGAATGAATCTGTG
AGAAATTAAATTTGTGGCAGTTTTGGCACAAAGAAGTTAGCCTTTCGTTTCACCTCTAGGCTGTTCAATGCAAACAATGC
ATTCCGTAAAATTATTGACCAGACAAGCTTTGCGCACGTAGAACTTCCTTTTTTTTGTTATTATTGAGACTGTTTCA--G
TGTCTGCGCTGCCACGAAATAACACTTTTCATT--AAAAAAATATACATATATTGCAATCACTCGAGTGGTGACAAAACA
CGTATGCTCGTTTTTCACCTCATGTGTAAAGATGTGCTCTCTGGACCGTGCCTTGCCCCAGCTCAATCTCTCCTCCAAAC
CCAT-------TTTGACATTCTCCTCTTGTCTTACAAAACTTCGGTGACCATGTTAGTGAATCTGCCATGTCCTCCAACA
AAGGTCGGCACTCAGTAATGCCTTTGACACGTCAACTTATGTGAGGATAATTACGAAACATAAAACAACCCA---TTTGT
AGAGTGATGACCTTCCAAAGCACCATATCTCCTCAGCAGATGCATCCATTCATGGCCAGACAAAGCTCCTATAGTTCTCT
AATAGGAAGCTAGTATAATTGAATGGCCTCCGGTGTCCATTGATCACCAATGGAGAAGAACTAGAGAGCTCAGCTAGAGC
CAGAGCAGGTGGTAGTACCAATTCCATACTGCTGGTACCAATGGCAACTTGATCACTTCAAATTGGAGGGACTATTCAGA
CAAATTCCCATACTGTAAAA-CCATTATTTATGATATGTCGAAGG-TTCGTTTGAAAAGGCCGTGATCTAAATCATGTGG
TCGGTT--------------------------------------------------------------------------
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---------------------------TGGACCGTGGCATTGCAAATGAGCTATGGTCTATGATTTTGCCTTGTTTACAC
GGATGAGTGACCTACACCTTCCAATCTATGGATTTGCC--
>chr2D_1
TGTTTACTCTTCCCCTTCCGCCCCTTGTGGATCCCGCCGTGCCGTGCCGTGCCGTGCCGTACCTCAGCGCCGCCGCCC--
----------------------------CCGCCTCCCACCCACCAACACTGGGGACACGCGTCGCCGCC---GCCGCCGC
CATCGCCGTTCCCCTTCTTCGTCGAGTCCCAGCACATCGCGCCAGGGCTATCCTGCTACCGTCTCCCTCCTTTCGAGGTA
CTCCCAGCATCAGTTCCCC---TTGTTAAATCAATCCGTCTCACTAGGAGAAACAAGT-TCCGATTAGTAGTTCGATTAG
GAGTTGCCGATCGATTAGGAAGTACCTCTCTCTATATGTATATCTACAGATCCAATTGGTTCGGCGATCGATCTCGACCA
ACTAAAAAAATACTAGCATGCTATTTCGGCGTTTTTAACCTCCCTATAGCGTATCTGAGAGTGCCATTTTAGCCATTTTA
TTACTCGCTATGACGCTAATCGCGTTATGGATAATCTACTGCAAAATAGAGCTCCTGCCATGGATAATCTACTGTAATAT
CTCAGATTTTCCTTATGCAAGTCTCTTTCCTTCTCTTGATTGAAGTAGAACATGGTTTGGTGCTTTATGCATGTTTGTTT
CCTTCTCTGCTTTGGAGCATCATGCCATCCGAACATAATACTAGCTAAGGAGGTTTATGCA-------------------
---------GCTTTTCCTGTAGTTTCCTTCCCTTTTTGGATGCATGTTTGTTTCCTTCCCAGTTAATTCCTGTAGTTTGA
CCATTGCATAATACAACTACAAATTTTGATGTAGTTTAACCATTGCACGTCATGCCCTAGTTTAACCATTGCCTGTACA-
-----------------TGCCCTGTTT-CCCTGTTTTTCCTGTAGTTTAACCAGGGCTTAGAGCAATAATCTGATCTCCT
TGTAACTACAAATTTTAGATGTTGAACTTCTTAATTTCTGGGATATATTTGGCATATTTTTTT-CACAACGCTATTTTGA
ATATAGCACGCTATAACCTGTATAGCATTTGGAGAAGGGCCACGCTGTTTTTTACATTGATCTCAGCACCGATCAACGAC
GCACAGGAAGGCAGCAGGTGTATCGACCGACTCCACCATGGGAGCCTGGTTCTCTTTCCCTGGTAACGACGGGCGTGCGA
TCCCAGGAGAGTGGCTGGTTGCAGCTGGATTGGATGCCACTCCCTTTGATATGCGTTGACTCAAGAACGTGGGTCGCCC-
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---------------------------------AGCCACCCGGTACAATTCCGTGG------------------------
-------------------------------------------------------GTGTGTGTGTGTGTGTGTGTGTGTG
TGTG----------------------------------------------------------------------------
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-------------------------------------------------------------TGTTCAATGCAAACAATGC
ATTCTG------------CCAGACAAGCTTTGCGCACGTAGAACTTT-----------------------------A--G
TGTCTGCGTTGCCACGAAATAACACTTTTCATA--AAAAATATATACATCTATTGCAATCACTCGAGTGGTGACGAAACA
CGTATGCTCGTTTTTCACACA------------------TCTGGAACGTGCCTTGCCCCAGCTCAATCTCTCCTCCAAAT
CCATTTTGACATTTGACATTCTCCTCTTGTCTTACAAAACTTCGGTGACCTTGTTAGTGAATCTGCCAT---CTCCAACA
AAGTTCAGCACTCAGCAATGCCTTTGACA---------------------------------------------------
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>chr3A_71
CGT-----------------------------------------------------------------------------
--------CGCCGCCGCC----CCTCAATCGCCTCCCACCCACCAACTCTGGGGACGCGCGTCGCCGCCGCCGCTGCCGC
CATCGCCGTTCCCCTTCTTCGTCGACTCCCAGGACATCGCGCC-------------------------------------
------------GTTCCCCTTGTTG-------------------------------------------------------
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---------------ATGCATTGGGGGTACAAGCTTTGTGTTTTCTCTAGAAGAAATGGACCTGCACGAGCGAATCTGTG
AGAAATTAAATTTGTGGCAGTTTTGGCACAAAGAAGTAAGCCTTTCGTTTCACCTCTAGGTTGTTCAATGTAAACAATGC
ATTCCGTAAAATTATTGACTAGACAAGCTTTGAGCACGTAGAACTTTCTTTTCTTTGTTATTACTGAGACTGTTTGA--G
TATTTGCGTTGCCACGAAATAACACTTTTCATAGAAAAAAAATATACATCTATTGCAATCACTCGAGTGGTGACAAAACA
CGTATGCTCATTTTTCACCTCATGTGTAAAGATGTGCTCTCTGGAACGTGCCTCGCCCCGGCTCAATCTCTCCTCCAAAC
CCAT-------TTTGACATCCTCCTCTTGTCTTACAAAACTTCGGTGACCTTGTTAGTAAAGCTGCCATGTCCTCCAACA
AAGGTCAGCACTCAGCAATGCCTTTGACATGTCAACTTATGTGAGGATAATTAAGAAACATAAAACAACCTGTATTTTGT
AGACTGATGACCTTCCAAAGCACCATATCTCCTCAGCAGATGCATCCATTCATGGCCAGACAAAGCTCCTATAGTTCTCT
AATAGGAAGCTAGTATACTTGAATGGCATCCGGCGTCCATTGATCACCCATGGAGAAGAACTGGAGAGCTCGGCTATAGC
CAGAGCAGGTGGTAGTACCAATTCCATGCTGCTGGTACCAATGGCAACTTGATCACTTCAAATTGGAGGGACTATTCAGA
CAAATCCCTATACTGTAAAATCCTTT-TTTATGATATATGGGAGGTTTCGTGTGAAAATGCCGTGATCTAAATCATGTGG
CCGGTTTGGAGAGTATTTGACAAAAAACTACCACATTAGGGGTTGCCGTCCCATGGAACTACCACATTTCAAAAAAGTGA
CTGATAACTACCAAAAATTTCTATTTTTGTGACTAAAAACTACCACTTTTAAAAAATGTTTAGTTTAGACGATTTAAACA
CGTTTATGACATGTGGGCCCCATCTGTCAGGGCTGACATGGCGGCAAAGTTCAACTCCGTTTATTTTGACCGTTAAGCTG
ACCGTTATGACAGGTGGGGCCCACACGTCATTCTTCTTCTTCCTCTCTCTATTTTTCTTTGGCATTTTACCAAACACCTC
ATGTGCGTGGGAGGGCAGGTCAACTCCGGTGACGCGCCCGCCGTGAAGACGCCCCCGCTGCTCTTGACCAAGGAAGATGG
TCCACAGGACGCCCCATCCTCGCGCACCCAGGACGACAAGGTGCGCGCCTCACCTGCCCGAGGTGCTTCGACAAGGTGCT
CGCGCTGCAGGAGCTGCTCGCCATGGTTCTCGCGCGCGCTGCAGGAGCTGCTCACCATGGTGTTCGCGCACTGCGGCCGA
GCCTCGTGGCAGGAGGGAGCCTCGATGTCTCGTTCCAACGGAAGGGGAGGAGGGTGTTGCGGAGCTCCGGCTCACATGCG
GTCGTCGTAGGAGGCGAGAGCGAGGCCGGAGACGGGTGTTGCTGCTTGCGGCCACTGCTACTGCTCCTATGCTGGAGGAT
GTCATGGTGATCTTTTTGGATGTGGCAGCGAAGGACACGGCTCCGACGGCTGAAAACACGGCAGTGGCCTGCGGTGGAGT
GCGGCCTGCGGCTTGGTGGTGTGGGCTCGGAGTTCGAGTAGTGACTCCTGGAATACGCCGTGCACGTCGGAAGATGCAGG
AAGCCATCGAGGAGGCAGCCGACAGTGTTTGATCCGCTGTGTAGTGCGGCGAGGGCTCCGGGATGAGCAGGAGCTCGGCG
AGCGCGGCGTGGAGCGCGTCGAAGCAGTTGAGGCCCGTGGTGATGTTGCTTTGCAGCCACTGCTGTTGCTCCTTGCCGTT
GACCACAAGCTCCAGCTCAAAGGGAGGCCGGCGAGGGCGGCGGCAGCAGGGCCTAGAGCTCGCAGCACCTCGGCTTCGCG
TGCATCTGCGCGGGCTTCTCCTCCGGCACCCTCTGGCATGGAAGGCCACCGGAGTGCAGGATGGCAAAGGCCACCAGAGC
ATGAGGGGGCGGCTGGGCGCCGGCTAAAAGCTGCATAGGAGGTGTTTGGAAAAATGCCAAAGAAAGATAGAGAAAGGAAG
AAGAAGAATGACGTGTGGGCCCCACCTGCCATAACGCTCAACTTAACGGTCAAAATAAATAGAGTTGACTTTGCCGCCAC
GTCAGCCCTGACGGTCCCGCATGTCATAAACATGTTTAAATCGTCTAAACTGGCCATTTTTCAAAAGTGGTAGTTTTTAG
TCATAAAATTAGAAAATTTTGACAGTTGTCAGTCAATTTTTTGAATGTGGTAGTTCTGTGGGACGGCAACCCCTAATGTG
GTAGTTTTTTGTCAAATACTCTCGGTTTGGACAGTGGCATTGCATATGAGCTATGCTCTATGATTTCGTTTTGTTTACAC
GGGTGAGTGACCTACACCTTCCAATATATGGATTTGCCCG
>chr2D_1008
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--ACACGAAAGTAGCAGGAGGATCGATCGAATCCATT---GGAGCCTGATTCTCTTACCCTGGTAACGACGCGCGTGCGA
TCCCAAGAGAGTGGGTGGTTGCAGCTGGATTGGATGCCACTCCCTTTGATGTGCATCGACTAAAAAACATGGGTCACCCC
GGCCCGCGCACACCAGAGTATGTCAATTTTACTTACTTGTTTGCTCTTACTTCAAGAGAGATTGTATTGATTGTGTAATT
GTCTTGAATCAACGAAACGATCCCTGATTTTTCTTTGTTTGTTTGACGACAGAGAATCCGATGCCTACCACATTGCCAAT
CTCGCACACTGTGCCCTCCGACATTACAACACCAACCACCCGGTACATCACCGGCCAGTGTTTCATCCATCTCAGTTCTT
GCA-----TACATTCCCTGTTTTACTTGGTTATGCTTGTAATAATA--------------TGTAGA------TGTGTGTG
TGTGCAGGGTGCTGAGTTTAGGTCTCCTGATCAGCCCACCAC----------------------GGCTTCAGGGAAGATC
TCTGGTACCACCTCAACTTCTCGGCATGCACGACAAACGATGACGACGAGCAGAGCTTCTTCGCTGAGCTACGCTATGAC
CGGTGCTCCAGCACAATAATCATCGAAACATGCACCATCTTAGGTACGCAGACATATGTGGATCCATTAATGTTCATGTT
ACACGACTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCAGCCCCTCTCCAGAAAAACCATTTTGCTGCTTTAGAAGCAGTTGCACATTGTGTCCAGATGAATCCAAGAT
TTTGCATCCAAGCGATGTGGAGCTTGGGTGTGGGAAGGAGGGCCACCAAGAGGAATTCTTCCGCAAGAGGTGTGGATGGA
AAGGTCGTGTAAAGGAATTTTTCAGTCCGAGGGAGATGCTAGCGATACCCTTCAAGTTAGGAGGACCAATGCCTTGATAT
AGACTGGAGTAACTATGATTTACTCCTGCTTACAGTTCAGTTGCAATGTTCTACTCCTACTTTTAGGCTTGTAAATTTAT
TATTTCCTATCATTGATGCATT-GGGGTACAAGCTTTGTGTTTTCTCTAGAGGGAATGGACGTCCACTAGTAAATCTGTG
AGAAAGTAAATTTGTGGCAGTTTTGGCACAGAGAAGTAAGCCCTTCGTTTCACCTCTAGGCTGTTCAAAGTAAACAATGC
ATTCCGTAAAATTATTGACTAGACAAGCTTTGCGCACGTTGAACTTCTTTTTCTTTGTTATTACTGAGACTGGTTGAGTG
TTTGTGCGTTGGCACGAAATAACACTTTTCATAGAAAA----TATACATCTATTACAATTACTCGAGTGGTGAAG--ACA
CATATGCTCG-TTTTCACCTCATGTGTAAAGATGTGCTCTCTGGAACGTGTCTTGCCCCAGCTCAATCTCTCCTCCAACC
CCAT-------TT-GACGTTCTCCTCGTCTCCTGCGAAACTTCGATAACCTTGTTAGTGAATCTACCATCTCCTCCAACA
AAAG-------TCAGCAATGCCTTTGACACGTCAACTTATATGAGGATAATGAATAAACAT-AAATAACCCATATTTTTT
AGACCGAGGACCTTCCA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
-----------------------------------------------------------------------------SSS
SSSSSSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------S-----------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-------------------S--------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-----------------------S----------------------------S---------------------------
-------------------S--------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
SS------------S-------------------------
>forward_405
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GCGATCGATCTTGACAA
CGATG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_2452
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CCAAGTTAGGAGGACCAGTGC--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>forward_1720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTGGCCTGCCTAAAGGATGG----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------
>reverse_3304
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------ACATGCTGCTGGTACCAATG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
