>input_sequence_64473
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----------------------------------------ATGGGTATGTGTTCCAACAAGAAGCGCAGCAGCCCTGGCG
TTGCTGTGTGGTGTGTAGTCCTGGGCTTAGCCCTGCTCGTCGCCGTCGATGCGGCGGGCAAGGAAGGTGGTGGGCGAGCC
GGGCACTTGGCTGAAGAGCATGGGGATGCAGCCTACTGCTCCGCGTTGTGCAACGGGCG------GTCGGACTTCGGACC
GTGCTACAATGAGTGCTTGTACGGGAGGTAGGTAATACTGCTTTGCCTTTGTTCGTCATGAGCTCAGCT-----AGCTCG
TTTGCTTTTCAACT--AAAAATGACGGTCAAGCTGTGACCTGTGAGC------------------TTCATGTGTCGCCAG
GGATCAGTTTTGTTTCGTTTAGTTCTGATAGCTACAAACAAATGTTG-----TTTGGTGGCCCACAGGGTGACAGGACAA
GAACAAGCGAGAGGAGGTGGTGGAGTTGTAGGGCGAGCTGGACTCCTGGCGATGCCGACGGAGCGCACCGGAGGCGAGGG
AGAAGAGAAGGGGAAGCAAGAGGACCCCGTCGTCCGTCTGAGCGACCCAGTCTGGTGCTACGACGCCTGCCGTGAGCATC
CAGAATTGGACTACACCCAATGCGTCAATGATTGCTACGCAGAGAATATGCCGGACGCCGCACGGCTAGCGGCCCATGGA
GGAACTGG------------------------------------------------------------------------
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----------------------------------AGGAGAAGAAGCAAGAGGAGGAGCTGTTGATGGGCTGACGGCGGTG
GGGAAACCACACTGCGACTGGTTCCGCGACTGTAGTGTAACGCCATGCGTCTGGCGATGTGGCAAGAGGGCCCAAGAGGA
GGACAATGAAGGAACAAGAACAGGAGCGCTCAATGTCCAGGCGGCTGCGCGGCATGAGGTTGCTGTAGGAGCATGTTCGT
CGACTGTGTACGTGGAATCATGCTATGCCTGTTGCCAAAGGGAGGTCACTAGAAATCCGGATTTCGACTGGTATGCTTGC
ATTCGCAGTTGCCACGACTAA-----------------------------------------------------------
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>chr6D_1_TraesCS6D01G010300
CATTGTTATTCTTGCGTTTGGGTTGCTGTGTTTAACTCCTTGTATTTGTTTTCCCCACTTTGCTTTTTATTTTCTCTGTA
CTGTGTCTCCCTTGTAGTTCTGGCTGGTTTATAACTATGTTTCACGTGCATGATACTAGCTACGATATTCGCATTACAGG
CAGCCTTATCCAGCTATAGAAACGCATCCACTACACTAACAAACACAGATATACAAACATAACCATTACACTAACAAACA
CGGGGCGCAACCGCGCAGGTGGCATCAGCAACATTCATTTACGGCGTGTGAGCTCGCGTGAATATTCGCGGATTTACGCG
ATTTGATATGCGAATTAATATTTTGGACACTTGGCGCTGCCTGGCTCCCTTGTATTTTTGTTCTTTATACTTCCAGATAT
TGTATATAAATATATTACACAAAACACTCTACGTAAAAACATTTCAAAACAAAATATTAACCAAACATTTAAAAAGCTTA
GCAACTACTCTGTCCAATGCATTGGTGTTTAGCTTTTGTAGCTAAACATTGCATTGCGGTGCGTTGTGCTATTATCTAAG
TTACTCCTGCTATAAGCAGCCTTACTCTTATCTAGCTATACAAATTCATATGATGCACTAACAAACACGGGGGGCAAGAG
GCATCTGCAACATGCGGGCGGTCAAACAAGGACGCTCATACGTGCTGATCGATCTAGACACCGCAACAATTGCCCATGCA
CGCAAACATTTATTTAATCTAATGATCTAGCAAGTTGTACTGTACGTAGTTGATTTTCAAGCAAGTAGATATGTGATCCC
TGCAGCTATGCACATGCATGGCACGCACGCAGATGCCGGATCGGATCAGATTGGATCGACACCGGCAAGAAGATTCCTCC
CAACCCAGCTCGCTGGCTTCACTGGCCTATTTATATATCGGTGTGCCCATCTACTCAATCCATCCGTCCTGGGTAGGGTT
GTGAGCCGTAGCAAATTAGTTCAACACCAACCAGCTAGCCATGGGTATGTGTTCCAACAAGAAGCGCAGCAGCCCTGGCG
TTGCTGTGTGGTGTGTAGTCCTGGGCTTAGCCCTGCTCGTCGCCGTCGATGCGGCGGGCAAGGAAGGTGGTGGGCGAGCC
GGGCACTTGGCTGAAGAGCATGGGGATGCAGCCTACTGCTCCGCGTTGTGCAACGGGCG------GTCGGACTTCGGACC
GTGCTACAATGAGTGCTTGTACGGGAGGTAGGTAATACTGCTTTGCCTTTGTTCGTCATGAGCTCAGCT-----AGCTCG
TTTGCTTTTCAACT--AAAAATGACGGTCAAGCTGTGACCTGTGAGC------------------TTCATGTGTCGCCAG
GGATCAGTTTTGTTTCGTTTAGTTCTGATAGCTACAAACAAATGTTG-----TTTGGTGGCCCACAGGGTGACAGGACAA
GAACAAGCGAGAGGAGGTGGTGGAGTTGTAGGGCGAGCTGGACTCCTGGCGATGCCGACGGAGCGCACCGGAGGCGAGGG
AGAAGAGAAGGGGAAGCAAGAGGACCCCGTCGTCCGTCTGAGCGACCCAGTCTGGTGCTACGACGCCTGCCGTGAGCATC
CAGAATTGGACTACACCCAATGCGTCAATGATTGCTACGCAGAGAATATGCCGGACGCCGCACGGCTAGCGGCCCATGGA
GGAACTGG------------------------------------------------------------------------
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----------------------------------AGGAGAAGAAGCAAGAGGAGGAGCTGTTGATGGGCTGACGGCGGTG
GGGAAACCACACTGCGACTGGTTCCGCGACTGTAGTGTAACGCCATGCGTCTGGCGATGTGGCAAGAGGGCCCAAGAGGA
GGACAATGAAGGAACAAGAACAGGAGCGCTCAATGTCCAGGCGGCTGCGCGGCATGAGGTTGCTGTAGGAGCATGTTCGT
CGACTGTGTACGTGGAATCATGCTATGCCTGTTGCCAAAGGGAGGTCACTAGAAATCCGGATTTCGACTGGTATGCTTGC
ATTCGCAGTTGCCACGACTAAGATGCTCTCCCAATC---AAGGAGCGAGAGAACAAGAAG--------------GCCGGC
GAAGTAGTCGTTTGTTGTGAGCTTATACTAGCTCGTTTCCTTTCCAAACAAATAATGTGCGGTGCAGTGAATCCGTCACA
GTCCATCTGTTTGCTTTAGTTCTGTTACCTACACCTTTATTTACAATGGAGTTGCAGAATGCTATACATGCCGTGCTGCT
ACGGTTCATGCATGTAGGTCTCTCGAGGTGGCTATGAATAATGGGCAAGCTCTAGGCTACCATGTGTGCGGAACCAAGCC
TTGTCATTGGTTGTAGTGCTTGCACTAACTGAAAGTTTTTTTCTTCGAAACGAGCAAGCTTCCAGTGAAGACAGCACATT
AGTATTGCTAGGCGGACCCATCCGAAGATTGTACCACCATCCATGGCGGGTGAAGGCTGCCTGCTATTCCCGACGACGCA
CGAAATCAGTGTCGATCAAGGAATAATATACACTACTACTCCCTCCGTTCTTGCAAGAGTGTACTTCCAACTTTGTTGAA
AGTTTGACCGAGTTATGTAAAAATATATAGATGTTTGTGAAATCACCTAGGCATATCATGAAAATATATTTTATCATGAA
TCTAATGCTACTAATTTGATTGCATAATTGTTGATGTATTATTGTATAAATACAGTCAAATATAAAAAAGTTTGACATTA
CAATAAAGTTGGAAGTACACTATTTTAAGGACGGAGAGAGTAAGTAAGAACAAGTTGATTCTAAATTTTTCGTGCACAGA
GGTTGGATATTATGACTTGGGCCATGTGTTGGAACGGGTAGTCTAGATGCGACGTGTTCCCCGTTCCTGCCCACCCATCC
TCCATGAAAATGATGGATCGACTCCATACAATAGGTCCATTATTTGAGTATATAAAATACTACTCCATTCGGCATTGTTA
ATTTCTTTGTACCCCTGATTTATTTCTACAATACGCAAGCATACTTTTACTCCGGTGCTAATTAACAGTCAAAGTGCA
>chr6B_132
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---------------------------------------------------GATACTAGTTATGATGCTCGCATGTCGGA
CAGCCTTATCCAGCTATACAAACACATCCTCTACACTAACAAATACAGATATACAAACGCATCCAGTGCACTAAGAAACA
CGGGGCGCAACCGCGCAG--------------------------------------------------------------
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-----------------------------------------------------------------------------GTG
GCATCTGCAACATGCAGGCGGTCAAACAAGGACGCTCATACGTGCTGATCGATCTACACGCCGCATCAATTGCCCCTGCA
CGCAAACATTTCTTTAATCTAATGATCTAGCAAGTTGTACTGTACGTAGCTGATTTTCAAGCAAGTGGATGTGTGATTCC
TGCAGCTATGCACATGCATTGCACGCACGCAGATGCCCGTTCGGATCAGATCGGTTGGTCA----------------TCC
CAGCCTAGCTAGCTGCCCTCACCGGCCTATCTATATATTCGTGTGCCCATCTACTCAATCCATCCATCTTGGGTAGGCTT
GTGAGCCGTAGCAAATTAGTTCAACACCAACCAGCTAGCCATGGGTATGTGTTCCAACAAGAAGCGCAGCAGCCCTGGCG
TTGCTGTGTGGTGTGTAGTCCTGGGCATAGCCCTGCTCGT---CGTCGACGCGGCGGGCAGTGAAGGTCGTGCGAGAGCC
GGGGACTTGGCTGAAGAGCATGGGGATGCAGCCTACTGCTCCGCCTTGTGCAAAGGCCGGTCGCAGTCGGACTTCGGACC
GTGCTACAATGAGTGCTTGTACGGGAGGTAGGTAGTACTGCTCTGCATTTGTTTGTTGTGAGCTTAGCTTAGCTAGCTCG
TTTCCTTTCCAAAA--GATAATACCAGTCTTGCTGTGAGCGTGCGTGTGAGGCTGGCTGAATCTGTTCATGCATCGCCAC
GATCAA--TTAGTTTGCTTTGTTTCGGTTATACTTGTTACAAGTAATTGGCATTTGGCGGCCCACAGGGTGACAGGACAA
GAAGAAGCAAGAGGAGGTGGTGGAGTTGGAGGGCCAGCTGGTCTCCTGGAGATGCCGACGAAACGCGTTGGACGGGAGGA
AGAAGAGAAGACAAAGCAAGGGGACGCCACCGTCCGTTTGAGCGACCCAGTCTGGTGCTACGACGCTTGCCGCGAACATC
CAGAATTGAACTACAACCAATGCGTCAATGATTGCTACGCTGAGAATATGCCGGACGCCGCATGGCTGGCGGCCCTTGGA
GGAACCGGAGGAGAAGAAGCAAGAGGAGGAGTGGTTGATGTCCCAATGGTGGTGGTGCAGCATGAGGCTGCTGCAGGTGC
ACTGTCACGGGGCAACTGCGATGAGTATTGCCGCAAACACTATGATGAAGGCTCCCCCGGGTATAGGCACTGCCAGTATA
TGTGCCCACATCTGAGGGTCCACGGGGTAGCAGAAGGAGAAGAAGCAAGAGGAGGAGCTGTTGATGGGCCGACGGTGGTG
GGGAGACCCCACTGCGACTGGTTCCGCGACTGTAGTGTAACGCCATGCGTCTGGCGATGTGGGAAGAGGGTGCAAGAGAA
GGACAATGAAGGAACAAGAACAGGAGCGCTCAATGTCCTGGCGGCTGCGCGGCATGAGGTTGCTGTAGGAGCATGTTCGT
CGACTGTGTACGTGCAATCATGCTATGCCTGTTGCCAAAGGGAGGTTACTAGAGATCCGGATTTCGACTGGTATGCTTGC
ATTCGCAGTTGCGATGACAAAGATGCTCTCCCAATCAAGAAGGAGCGAGAGAACAAGAAGTACGGCGTAGTCCCGCCGGC
GAAGTAGTCGTTCGTAGTGAGCTTATACTAGCGCGTTTCCTTTCCAAACAAATAATGTGCCGTGCAGTGAATCCCTCACA
GTCCATCTGTTTGCTTTAGTTCTGTTACCTACACCTTTATTTACAATGGAGTTGCAGAATGCTATACATGCCGTGCTTCT
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>chr6D_635
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--------------------------------------------------------------------------CAAGTG
GCATCTGCAACATGCAGGCGGTCAAGCAAGGACGCTGATACGTGCTGATCGATCTACTCATCGCATCAATTGCCCCTGCG
CGCAAACATTTATTTAATCTAATGATCTAGCAAGTTGTACAGCACGTAGTGGATTTTCAAGCAAGTGGATGTGTGATCCC
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-----------------------------------------TGGGTATGTGTTCCAACAAGAAGCGCAGCAGCCCTGGCG
TTGCTGTGTGGTGTGTAGTCCTGGGCTTAGCCCTGCTCGTTGTCGTCGATGCGACGGGCAAGGAAGGTGGTGGGCAAGCC
GGGCACTTGGCTGAAGAGCATGGTGATGCAGCCTACTGCTCCGCGTTGTGCACTGGGAG------GTTGGACTTCGGACC
GTGCTACAACCAGTGCTTGTACTGGAGGTAGGTAGTACTGCTCTGCCTTTGTTCGTCCTGAGCTTAGCT-----AGGCCA
TTTCCTTTCCAAAGAAAATAATAACGGTCATTCTGTGAGCGTGCGTGTGAGGCTGGCTAAATCTGTTCATGCAGTGCCAG
TATCAA--TTTGTTTGATCTAACTCTGTTAGCTACTGTACAACTGATTGGCGCTTGTCGGCCGACAGGGTGACAGGACAA
GAAGAAGCGAGAGGGGGTGGTGGGGCTGGAGGGCGAGCTGGTCTCCTGGC------------------------------
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>chr6D_1450
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---------------------------------------------CTGGCGACGGCGACGGAGCGCGCCGGACGCAAGGG
AGAAGAGAAGGCGAAGCAAGAGGACTCGGTCGTCCGTCTGACCGACCCAGTCTGGTGCTACGACGCCTGCCGTGAACATC
CGGAATTGGACTATACCCAATGCGTCAAGGATTGCTACGCTGAGAATATGCCAGACGCCGCACTGCTAGCGGCCCATGGA
GGAACTGGAGGTGAAGAAGCAAGAGGAGGAGCGGTTGATGTCCCAATGGCGACGGTGCAGCATGAGGCTGCTGCAGGTGC
ACTGTCAGGGAGCAACTGCGATGAGTATTGCCGCAAACACTATGATGAAGGCTCACCCGGATACAGGCACTGCCAGTATA
TGTGCCCACGTCTGACGGTCCATGGGGTAGCAGAAGGAGAAGAATCAAGAGGAGGAGCTGTTGATGGGCTGACGGCGGTG
GGGAAACCACACTGCGATTGGTTCCGCGACTGTAGTGTAACGCCATGTGTCTGGCACTGTGGGAAGAGGGTGCAAGCGGA
GGAC----------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--S---SS------SS-S-S
------------------S----S-----S-------------S--------------SS-S---S-S------S-----
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-
---------------S----------------------------------------S--------S---------S----
------------------------------------------------------------------S---S---------
-------------------S-----------------S-S-----------S--S-S-S--SSSSSSSSSSSSSSSS---
--S--S----S----S-S----S-------S-------SS-------------------------S--S--------S--
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----------------------------------------S-S-------------------------------------
-----------------------------------------------------S--------------------------
----------------------------------S-------S--------------S------S---------------
---S----S---SS----S---S-------S-------S-SSSSSSS------------------------SS-------
-SSSS-SS-------SS----S-----S-------SSSSS--SSSSS----------S----------------------
---S------------------------S------------S------------------------S-----S-------
-----------S-------------S-------------------------------------------------S----
----------------------------------------S---------------------------------------
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--------------------------------------------------------------S-------SS--------
--------------------------------------S-----------------------------------------
--------------S-------------------------------S------S--------------------------
------------S-S---S-------------------------------------------------------------
------------S--S----------------S---------------------------S-------------S-----
-----------------------------------------------------------------------------S--
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_294
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----------------------------------TCATTTACGGCGTGTGAGCT--------------------------
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>reverse_1311
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------------------------------AGCTGTGACCTGTGAGCTTC------------------------------
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>forward_891
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-----------------------------------------------------------------------GATTCCTCC
CAACCCAGCTC---------------------------------------------------------------------
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>reverse_2678
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-------------------------------------ACTCCCTCCGTTCTTGCAAG-----------------------
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