>input_sequence_64348
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-----------------------------------------------------------------------ACTTAGTAC
TCCAAGTC-------TCATAGCCACCAAGGCAGCAGCCATCACGCCTCC-TACTCCAGCCAGCCAACTAGCCTAGCAAAA
GTACGTACG---ACCGCCTAGCTTGCTCGGCAGAGCGGCAATGGACACGGGCCCCGAGCGCAACTGGAACTCGCCGGCAT
CCCCGCCGTCCTCGCTCGAGCAGGGGATGCTGACGTCGCCTGCGTCGCCGACGCCGAAGCGCCCCGCGGGGCGCACCAAG
TTCAAGGAGACGCGCCACCCGGTGTTCCACGGCGTGCGCCGCCGGGGCAGCAACGGCCGGTGGGTGTGCGAGGTGCGCGT
GCCGGGGAAGCGCGGCGAGCGGCTCTGGCTCGGGACGCACGTCACCGCCGAGGCGGCCGCGCGCGCGCACGACGCCGCCA
TGCTCGCGCTGTACGGCCGCACCCCCGCCGCGCGCCTCAACTACCCCGACTCGGCGTGGCTGCTCGCCGTGCCCTCCTCC
CTCCCCGACCTGGCGGACGTCCGGCGCGCCGCCATCGGGGCCGTCGTGGACTTCCTGCGCCGGCAGGAG------GCGGG
CGCCAGCGCTGGCGCCGGCGCCGAGGTGGCCCACGTCGACGGGATCGCCTCCGCCGCGTCGGCGCCAGACAATGCCAGCT
CGTCGGCGGCGGCATCCCACTCCCAGCCGCCATGCGCCAATGCGGGGTTCGAGGTGCCGGACGCATTGTGCCACGACATG
TTCGAGCTCCACACGTCCGGCGAAATGGACGCGGGCACGTACTACGCGGACCTCGCGCAGGGGCTGCTCCTGGAGCCGCC
GCC------GTCCAGCGGGGCGAGCTCGGAGCACGGAGATGATGCGGCGCTATGGAACCACTGATGACACCGAG------
-GGACTCCGGTCAAAACTATATTCGCTACTATTACGTTGATTTATTTCTTTATTATTTATTCCGAAAAAGCGCCCCGTAC
---------GTGGACCTATGGTCGGCATAATAA-----------------------------------------------
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-------------------------------------------------------------------------------A
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-----------------------------------
>chr5D_1_TraesCS5D01G318500
TAGATGATGTCGAACTGAAATTTGGGGAAAGAATTAAAAAG--GGAAATTACACA-TATGCTTGTTTCCTAGGTTGGCCG
TCGC---CTCCACACGGGGATGGATGCGAGTATTATAATTTTTGGATATAATTTATGGAACTTCCTTTTTCTCTGCCTAT
AAGATTGTGTTGGTATGCTAGTAATTATATTTGCTGATGGGCTGGGCGGTCCAAGACACACTTTTGTCCTCCAGCATCTC
TGAATGATTGTACCTACACGCATCCTCCATGTTTTTCTTTGCTTTAGATTTTTTTGGCAAGCATAAAGGAGCTAATTGCA
TCCGCAATACGAAAAGCAAAAGTCCCTCATTGATCGAGTATGGTTTTGGTGTGGTACTCGCTACACTACCAGGAAAGCAC
ATAAAAGTTATCATTAAAAACTATGTTCAAGTACGAATCTGACGATATAATTTTTTGTAACATGTATTAATATTTTATTA
GTTAAATCTATGGTCAAAATCTGATACAAA-TACGAAGGAGACTAATAAATCATGACGGAGGTAGTACCCGCTACACTAC
CAGGAAAGTACATAAAAAGTTACAATTGATCCAAACAAGGCCAAATGTTATCACATGAAAACTAAATACACTTTCACATC
AAAAGAACACACTAATCTGATGCTAGGATGAGAACGCCGCGAATAGGATACACCAACACACCAAAATTAGCAAGTTGGCC
GTCACCCACGTTTTCTGGCACCCAGCCGACAAGCACAAAACGCGGTTAAAAAGATACTTCATGCATGCCCATGGGCCGTG
AGCTGATGGAG-----------------------GGAAGCTGCCT-TTTCTTTGCTTAACGCTGCAAACCCCCTACACGT
CTACACCGAGGAGTCACGCTACACGCGTCGGCCGGGGAGCGGTCCAGCGCCGCACACCACAAGCTGTCCCCGCGCCGACG
GGCAAAGCCGTCGCCTTTCACCGCGTACCGCAAAACTATAAATAAGCACACTCTAGGCAAGCCACTGGTTTACTTAGTAC
TCCAAGTC-------TCATAGCCACCAAGGCAGCAGCCATCACGCCTCC-TACTCCAGCCAGCCAACTAGCCTAGCAAAA
GTACGTACG---ACCGCCTAGCTTGCTCGGCAGAGCGGCAATGGACACGGGCCCCGAGCGCAACTGGAACTCGCCGGCAT
CCCCGCCGTCCTCGCTCGAGCAGGGGATGCTGACGTCGCCTGCGTCGCCGACGCCGAAGCGCCCCGCGGGGCGCACCAAG
TTCAAGGAGACGCGCCACCCGGTGTTCCACGGCGTGCGCCGCCGGGGCAGCAACGGCCGGTGGGTGTGCGAGGTGCGCGT
GCCGGGGAAGCGCGGCGAGCGGCTCTGGCTCGGGACGCACGTCACCGCCGAGGCGGCCGCGCGCGCGCACGACGCCGCCA
TGCTCGCGCTGTACGGCCGCACCCCCGCCGCGCGCCTCAACTACCCCGACTCGGCGTGGCTGCTCGCCGTGCCCTCCTCC
CTCCCCGACCTGGCGGACGTCCGGCGCGCCGCCATCGGGGCCGTCGTGGACTTCCTGCGCCGGCAGGAG------GCGGG
CGCCAGCGCTGGCGCCGGCGCCGAGGTGGCCCACGTCGACGGGATCGCCTCCGCCGCGTCGGCGCCAGACAATGCCAGCT
CGTCGGCGGCGGCATCCCACTCCCAGCCGCCATGCGCCAATGCGGGGTTCGAGGTGCCGGACGCATTGTGCCACGACATG
TTCGAGCTCCACACGTCCGGCGAAATGGACGCGGGCACGTACTACGCGGACCTCGCGCAGGGGCTGCTCCTGGAGCCGCC
GCC------GTCCAGCGGGGCGAGCTCGGAGCACGGAGATGATGCGGCGCTATGGAACCACTGATGACACCGAG------
-GGACTCCGGTCAAAACTATATTCGCTACTATTACGTTGATTTATTTCTTTATTATTTATTCCGAAAAAGCGCCCCGTAC
---------GTGGACCTATGGTCGGCATAATAA-----------------------------------------------
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-------------------------------------------------------------------------------A
ATGGCGGGACATTTGGGCGCATCAAAATCGGCCTCACACG-----------------------------ACCACATACTT
CTGGACATGCCAAGTCTGGCGAGCGAGAATGAAGTACTACGCCTCTTATTAAAATAAGACCAACCAAGGGCTAACCCTCG
TTGGCTTTTTTTTATAGAAGAAACTCCGTGAGCACCGCGCGTCCGTGCAGGGACTCGAACTCGGATGGGCTGGCAACAAC
CTCAGCTGCCCAGCCAACGGGTCGACGCCCTAAATGAGCTTATAAAAGGCGATGAACAGGAAAAGCGAAA----------
---GGCGGCACCGGCCGGCTGACACGAATGCCAGCCGTAAAATAATGAACCCGCAAGATGGTCCAGAAATAGGTGCCGTT
GGTTCACTTGCGATTACTATAAGGAGCGAGCGACGTCCACTAGTTCCTGCAGCTGGATATTTCCCCGCTCCGGCCTCCAG
GGGGGTAAACTGCAATTAAGCCACAAGATGTGGCCGAGACCCTCCCATGTCAGCCGGTGAAAGCACGAGAGCACTGAATA
TAGTATGATGACTTTTCCTTCGAGATTTCGATTTCGTGCCCAGAGATCGTTGTCACTGTGCCCGAGCGGTCGCTTCAGTG
GGGATGGGTCGCTGTCCGTGACCGTGAGCCAGGAAGCAGGCAGCTGGGACCGTCGCCTGGTGGTCCGGCGCGTCACTCTC
TCGCCCAGGCCCAGCAC--------------------GCAGGTCAAGATGCATTCCGAGGATATTTATAATG-TTTGCCA
CAAAAGTGCACCTCCCGCTTGCGATATTTGATGTCCGCTGGGGGCAAAAGATCTTACGC--------GTAGTGCCATGAA
GCTGCCTGCCCC-AGAATAGGCTGTATTTCTTCGCGCGCGGTCACCATAACGGGCAGCATCCATCCACTAGTTTGCTCGT
GTAGATTAGAGGCAG--GGGGGTGGTCCAGGTACGCTAATCAATCCACAGGAGGCCTCCACAGGATGTGGTAGAGACCCA
TCCAACT-TCCTCGTCTGGCGGTTAAAGCCATCTC
>chr5B_4
---ATGATGTCAAACTGAAATTTGGGAAAGAACTAAAAAAATTGGAAATTACACCCTATGCTTGTTTCCTAGGTTGGTCG
TCGCTGGCTCCACACAGGGATGGATGCGAGTATTATAACTTTTGGATATAATTTATGGAAATTCCGTTTACTC-------
------GTGTTGGTATGCTAGTAATTATATTTGCTGATGGGCTAGGCGGTCCAAGACACAGTTTTGTCCTCCAGTATCTC
CGAATGATTGTACCTACACGCATCCTCCGTGTTTTTCTTTGCTTTAGATGA-TTTGGCAAGCATAATGGGGCTAATTGCA
TCCGTAATACGAAAATCAAAAGTCATTCATGGATCCAGTGTGGTTTTTGTGTGGTACCCGCTACAATACCGGGAAAGCAC
ATAAAAGTTACCACTGGAAACTATGTTCAAGTACGAATCCAACAATGCAATTTTTT-TAACATGTATTGACATTTTGTTA
GTTAAATCTATGATCAAGATTTGATTCAAATTACGAAGGAGACTAATAAATCATGACAGGAGTAGTACCCGCAGCACTAC
CGGGAAAGCGCATAAAAGGTTACAATTGATCCAAACAAGGCCAAATGTTATCACATGAAAACTAAATACACTTTCACATC
ACAAGAACACACTAATCTAATGCTAAGATGAGAACGCCGCGAATGGGATACACCAACATACCAAAATTAGCAAGTTGGCC
GTCACCCACGTTTTCTGGCACCCAGCCGACGAGCACAAAACGCGGTTAAAAAGATACTGCATGCATGTCCATGGGCTGTG
AGGTGATGGAGCGCCCAAACACCACGCTTCGGAGGGAAGCTGCCTTTTTCTTTTCTTAACGCTGCAAACCCCCCACACGT
CTACACTGAGGAGTCACGTTACACGCGTCGACCGGGGAACGGTCCAGCGCCGCACACCACAAGCTGTCCCCGCGCCGACG
GGCAAAGCCATCGCCTTTCACCGCGTACCGCAAAACTATAAATAAGCACACTCTAGGCAAGCCACTGGTTTACTGAGTAC
TCCTACC---------CATAGCCACCAAGGCAGCAGCCCCGGCTCCTCCT--------CCAGTCAACTAGTCAAGCAAAA
GTACGTACC-------------------------GCGGCAATGGACACGGGCCCCGAGCGCAACTGGAACTCGCCGGCAT
CCCCGCCGTCCTCGCTCGAGCAGGGGATGCCGACGTCCCCTGCGTCGCCGACGCCGAAGCGCCCCGCGGGGCGCACCAAG
TTCAAGGAGACGCGCCACCCAGTGTTCCACGGCGTGCGCCGCCGGGGTAGTAACGGCCGATGGGTGTGCGAGGTGCGCGT
GCCGGGGAAGCGCGGCGAACGGCTCTGGCTCGGCACGCACGTCACCGCCGAGGCGGCCGCGCGCGCGCACGACGCCGCCA
TGCTCGCGCTGTACGGCCGCACCCCCGCCGCGCGCCTCAACTACCCGGACTCGGCGTGGCTGCTCGCCGTGCCCTCCTCC
CTCTCCGACCTGGCGGACGTCCGGCGCGCCGCCATCGGGGCCGTCGTGGACTTCCTGCGCCGGCAGGAG------GCGGG
CGCTAGCACCGGCGCCGTCACCGAGGTGGCCTCCATCGACGGGATCGCCTCCGCCGCGTCGGCACCAGACAATGCCAGCT
CGGCGGCGGCGGCATCCCACTCCCAGCCGCCATGCGCCAATGCGGAGTTCGAGGTGCCGGACGCATTGTGCCACGACATG
TTCGAGCTCCACACGTCCGGCGAAATGGACGCGGGCACGTACTACGCGGACCTCGCGCAGGGGCTGCTCCTGGAGCCGCC
GCCGCCGCCGTCCAGCGGGGCGAGCTCGGAGCAAGGAGATGATGCGGCGCTATGGAACCACTGATGAGTGATAACACCGA
GGGACTCCGGTCAAAACTATCTTCGCTC------CGTTGATTTATTTCTTTATTATTTACTCCGAAAAAGCGCCGCGTAC
GTGGACG--GTGGACCTATCATCGGCATAATAA-----------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
ATCGCGGGACATTTGGGCGCATCAAAACCGGTCTCACATAAACCACATATCAAGACCGGTCTCACATGAACCACATACTC
CTGGACATATGAAGGCCGGCAAG-----AAGAAGTAGGCTTCTTAT----------------------------------
--------------------------------------------------------------------------------
------------------------------TAAATGAGCTTATAAAAGACGATGAACAGGAAAAGCGAAA----------
---G-------------GCTGACACGAATGCCGGCTGTAAAATAATGAACCCGCAAGATGGTCCAGAAATAGGTGCCGTT
GGTTCACGTGCGGTTACCATAAG----GAGCGACGTCCACTAGTTCCTGCAGCTGGATATTTCCCCGCTCCGGCCTCCAG
GGGG-TAAACCGCAATTGACCCACAAGATGTGGCCGAGACCCACCCATGTCAGCCGGTGAAAGCACGAGAGCACTGAATA
TAGTATGATGACTTTTCCTTGGAGATTTCGATTTCGTGCCCAGAGATCGTTGTCACTGTGCCCGAGCTGTCGCGTCAGTG
GGGTTGGGTCGCTGTCCGTGACCGTGGGCGAGGAAGCAGGCAGCTGGGACCGTAGCCGGTGGTCCCGGCGCGTCACTCTC
TCGCCCCCTACTACTTCGAGAGCACAGCAAGGCAG------GTCAAGATACATGCCAAGATGATTAATTATGTTTTGCCA
CAAAAGTGCTACTCCCGCTTGAGATATTTCATGTCCGTTGGGGGGAAAAGACATTCCTAGAGCGAAGGTGGTGCCATGGA
GCTGCCTG-CCC-AGAATAGGCTCTATTTCTTCGCGCGCGATCACCACAACGGGCAGCATCCATCCACTAGTTTGCTCGT
GTAGATTAGATGCAGA-GGGGGTGGTCCAGGTGGGCTAATCAA-------------TCCACAGGATGTGGTAGAGACCCA
TCCAACTATCCTCGTCTGGCGGTTAAAGCTATCTC
>chr5A_611
AAAACG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------TAAATACACTTTCACATC
ACAAGAACACACTGATTTGATGCTAAGATGAAAACGCCGGGAATGGGATACACCAACACACCTAAATTAGCAAGTTGGCC
GTCACCCACGTTTTCTCGCACCCAGCCGACGAGCAC-AAACGCGGTTAAAAAGATACTCCATGCATGCCTATGGGCTGTG
AGGTGATGGAG-----------------------GGAAGCTGCCT-TTTCTTTGCTTAACGCTGCAAACCCCCTACACGT
CTACACCGAGGAGTCATGCTACACGCGTCGACCGGGGAGCGGTCCAGCGCCGCACACCACAAGCTGTCCCCGCGCCGACG
GACAAAGCCGTCGCATTTCACCGCGTACCGCAAAACTATAAATAAGCACACTCTAGGCAAGCCACTGGTTTACTGAGTAC
TCCTAGTCTAATAGGTCATAGCCACCAAGGCAGCAGCCATCACGGCTCCTTACTCCAGCCAGCCAACTAGCCTAGCAAAA
GTACGTAGTACCACCGCCTAGCTTGCTCGGCGGAGCGGCAATGGACACGGGCCCGGAGCGCAACTGGAACTCGCCGGCAT
CCCCGCCGTCCTCGCTCGAGCAGGGGATGCCAACGTCGCCTGCGTCGCCGACGCCGAAGCGCCCCGCGGGGCGAACCAAG
TTCAAGGAGACGCGCCACCCGGTGTTCCACGGCGTGCGCCGTCGGGGCAGCAACGGCCGGTGGGTGTGCGAGGTGCGCGT
GCCGGGGAAGCGCGGCGAGCGGCTCTGGCTCGGCACGCACGTCACCGCCGAGGCGGCCGCGCGCGCGCACGACGCCGCCA
TGCTCGCGCTGTACGGCCGCACCCCCGCCGCGCGCCTCAACTACCCCGACTCGGCGTGGCTGCTCGCCGTGCCCTCCTCC
CTCTCCGACCTGGCGGACGTCCGGCGCGCCGCCATCGGGGCCGTGGTGGACTTCCTGCGCCGGCAGGAG------GCGGG
CGCCAGCGCCGGCGCCGTCGCTGAGGAGGCCCACGTCGACGGGATCGCCTCCGCCGCGTCGGCGCCAGACAATGCCAGCT
CGTCGGCGGCGGCGGCCCACTCACAGCCGCCATGCGCCAATGCGGGGTACGAGGTGCCGGACGCATTGTGCCACGACATG
TTCGAGCTCCACACGTCCGGCGAAATGGACGCGGGCACGTACTACGCGGACCTGGCGCAGGGGCTGCTCCTGGAGCCGCC
GCCGCCGCCGTCCAGCGGGGCGAGCTCGGAGCACGGAGACGATGCGGCGCTATGGAACCACTGATGACACCGAGCG----
GGGACTCGGGTCAAAACTATCTTGGCTC------CGTTGATTTATTTCTTTATTATTTATTCCGAAAAAGCGCCCCGTAC
GTGCACGGTGTGGACCCATGATGGGCATAATAAAAGGCCAGTGACAGGCGCCGGTGCGCCGGCCCAATTTTGGGCCGGTC
GCAGCGCACCCTTCGATTCATCCATTAACAGCCGTTAGATGTGACGTCCCCTCCCCCACTCTTAAAAAAATCTGACGCCC
CCTACAGTCGTCTTCTTCCCAATTCCCCACGCTTCCGCACACAGAGGATCGCCCCCTCCCCTTCCCTCGACTTGCCGTCG
TCGGGGCCGTGGTCGACGAGCTCCGGCTGGGTCCCGACCTGTGGCCGTCAGGATTGCATCATGACCGCCAGTGGGGCCCT
CAGGACGCGGTCAGCGACGGATTGCAGCCCTCCCGACTGGTTCCAGCTCGCGGTTCGCCATGGTTGCAGCATGCCCCGAC
GTCACCGCCGCTGGCTTGCCGCGGCCGTTGGCTTGCATCTTGGTGTCCAACAAAGAAAATTATGAAAAACAGACAAAATC
CTCGAGTGGTCGGTTGAAGCAAAATATTACTAGGTTCCAACAAAAAAAAGCTCTAGTTCCAGCAAAATAAAATTTGATAG
GAAAAAAAGCTCCAGTGGTTGTAGCAAAAAAAAAATACTAGTTTCCAGCAAAAATATGAGCCAGTTCCAGCAAAAACAAA
TTTAGCAAGGAAGAGCTCCAAGGTTGATTGTAGCAAAAAAAACAAGCTAGTTCCAGCAAAATAACATGCCGGTTCCAGCA
AAAACACCTCAGAGGCAACCGATGGCTAAACGGTTCCGGCACCGGCGAACCCGCGGGGCGTAGCTTCGCCCCGCTGGATG
CAGCTTGGCCAGACGACGGTTGCAGCTCTGCCACTGGTGGTTGCAGCTCCCATAGCAGTCGTAGCTTGCCCCGTCGAATG
CAACTCAACCCACCATCGGTTGCAGCTCTGCCAACTAGGGGTTGTAGCTTCCCGTCGCCGTGGTTGCAACTCCACCAGGC
CAGCTTCTACTCGCATATCGGTGGTCGCTGTCGCCGGCACCGGTGGTGGTCTCGCAGCACTTCGGTGGTCAGCTGAAGAA
GGAGAAGGAGATGGGAGAGAGGATGCGAGAGAAAAAATGGTGCCGCGTGTTGGGGAAAAGGAGTGGCTGAGAGCACCTCG
TGTGAAAGAGATAAGATGGATGGAGCAAAGAGCGGTGCATGGGCCCTATGCTACAGGAGCGAACAGAGGCGCTGGATTTT
TCTTCTAATCACACACGACGCGCGCGAGACCGGCCGAAGGTTCGGCCAGCGCGCCGGTGTTAAACATTACCCATAATAAA
ATCGCGGGACATTTGGGCGCACCAAAACCGGTCTCACAT-----------------------------AACCACATACTC
CTGGACATATGAAGGCCGGCAAGCGAGAAAGAAGTCGGCTTCCTAT----------------------------------
--------------------------------------------------------------------------------
------------------------------TAAATGAGCTTATAAAAGACGATGAACAGGGAAAGCGAAAGGCAGCACCG
GCCG-------------GCTGACACGAATGCCGGCTGTAAAATAAGTAAA---CAAGATGGTCCAGAAATAGGTGCCGTT
GGTTCACGTGCGGTTACCATAAG----GAGCGACGTCCACTAGTTCCTGCAGCTGGATATTTCCCCGCTCCGGCCTCCAG
GGGGC-AAACCGCAATTAACCCACAAGATGTGGCCGAGACCCGGCCATGTCAGCCGGTGAAAGCACGAGAGCACTGAATA
TAGTATGATGACTTTTCCTTGGAGATTTCGATTTCGTGCCCAGAGATCGTTGTCGCTGTGCCCGAGCTGTCGCGTCAGTG
GGGATGGGTCGCTGTCCGTGACCGTGGGCGAGGAAGCAGGCAGCTGGGGCCGTCGCCGGTGGTCCCGCCGCGTCACTCTC
TCGCCCCC----ACTACTAGAGCACAGCAAGGCAGAGGCAGGTCAAGATGCATGCCAAGATGATTAATTATGTTTTGCCA
CAAAAGTGCTACTCCGGCTTGAGATATTTCATGCCCGTTGTGGGGAAAAGATATTCCTAGAGCGCAGGTAGTGCCATGAA
GCTGCCTG-CCCCAGAATAGGCTGTATTTCTTGGCGCGCGGTCACCACAACGGGCAGCATCCATCCATTAGTTTGCTCGT
GTAGATTAGATGCAGGGGGTGGTGGTCCAGGTACGCTAATCAATCCACAGGAGGCCTCCACAGGATGTGGTAGAGACCTA
TCCAACCATCCTCGTCTGGCGGTTAAAGCTATCTC
>chr5D_1116
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-------------------------------------GCAATGCACACGGCCCCCGAGTACAAGTGGAGCTCGCCGGTTT
CGTCGCCGTCCTCGCAGGAGCAGGGGATGCCGACGTCGCCCACGTCGCCGACGCCGAAGCGCCCCGCGGGGCGCACCAAG
ATCAAGGAGACACGCCACCCGGTGTACCACGGCGTGCGCCGCCGGGGCTGCAACGGCCGGTGGGTGTGCGAGATGCGGGT
GCCCGGCAAGCGCGGCGAGCGGCTCTGGCTCGGCACGCACGCCACCGCCAAGGCGGCCGCCCGCGCGCACGACGCAGCCA
TGCTCGCGTTGCACGGCCGCT---CCGCCGCGCGCCTCAACTTCCCTGACTCCGCGTGTCTGCTCGCCGTGCCCTCTTCT
CCCTCCAGCCTGGCCGACGTCAGGCGCGCCGCCATCGGGGCCGTCGTGGACTTCCTGCGCCGGCAGGCCAGGACCGCCGG
CGCC---------GGCGACGCCGAGGTAGTTCCCGTCAACGGGGTCGCCTCCGTAGCGCCCCCGCCGGGCAATGCCAGGT
CGTCGGCGACGTCGTCCCAGCA------GCCTTGTGCCAATGCTGAGTCCGAGGTGCCTGACGCATTGCGCGGCGGCCTG
CCGGAGCTCCACACGTCCGGGGAAATGGACGTGAGCACGTACTACGCGGACCTTGCGCAGGGGCTGCTCCTGGAGCCGCC
GCCACTGGCGGCCAGTGACTGCAACGACGG---CGGAGATGATGCGGCGCTATGGAGCCACTGAT---------------
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-----------------------------------
>chr5B_1116
--------------------------------------------------------------------------------
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-------------------------------------GCAATGGACACGGCCCCCGAGTACAAGTGGAGCTCGCCGGCTT
GCTCGCCGTCCTCGCAGGAGCAGGGGATGCCGACGTCGCCCACGTCGCCGGCGCCGAAGCGCCCCGCGGGGCGCACCAAG
CTCAAGGAGACACGCCACCCGGTGTACCACGGCGTGCGCCGCCGGGGCCGCAACGGCCGGTGGGTGTGCGAGATGCGGGT
GCCCGGCAAGCGCGGCGAGCGGCTCTGGCTCGGAACGCACGTCACTGCCAAGGCGGCCGCGCGCGCGCACGACGCGGCCA
TGCTCGCGCTGCACGGCCGCT---CCGCCGCGCGCCTCAATTTCCCTGACTCCGCGTGTCTGCTTGCCGTGCCCTCTTCT
CTCTCCAGCCTGGCAGACGTCAGGCGCGCCGCCATCGGGGCCGTCGTGGACTTCCTGCGCCGGCAGGCCACGATCGCCGG
CGCC---------GGCGACGCCGAGGTAGTTCCCGTCAACGGGGTCGCCTCCGTAGCGCCCGCGCCAGGCAATGCCAGGT
CATCGGCAACGTCGTCCAAGCA------GCCTTGTGCCAATGCTGAGTCCGAGGTGCGTGACGCATTGCGCGTTGGCCTG
CCGGAGCTCCACACGTCCGGGGAAATGGACGTGAGCACGTACTACGCGGACCTTGCGCAGGGGCTGCTCCTGGAGCCGCC
GCCACTCGCGGCCAGTGACTGCAACGACGG---CGGAGATGATGCGGCGCTATGGAGCCACTGATACCGGTAGTCTT---
----CTCCGGCCAAAACTAT------------------------------------------------------------
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-----------------------------------
>chr5A_1116
--------------------------------------------------------------------------------
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-------------------------------------GCAATGGACACGGCCCCCGAGCACAACTGCAGCTCGCCGGCTT
CCTCGCCGTCCTCGCAGGGGCAGGTGATGCCGACGTCGCCCACGTCGCCGACGCCGAAGCGCCCCGCGGGGCGCACCAAG
CTCAAGGAAACACGCCACCCGGTGTACCACGGCGTGCGCCGCCGGGGCCGCAACGGCCGGTGGGTGTGCGAGATGCGGGT
GCCCGGGAAGCGCGGCGAGCGGCTCTGGCTCGGCACGCACGTCACCGCCAAGGCGGCCGCGCGCGCGCACGACGCAGCCA
TGCTCGCGCTGCACGGCCGCT---CCGCCGCGCGCCTCAACTTCCCTGACTCCGCGTGTCTTCTCGCCGTGCCCTCCTCT
CTCTCTAGCCTGGCAGACGTCAGGCGCGCCGCCATCGGGGCCGTCGTGGACTTCCTGCGCCGGCAGGCCACGATCGCCGG
CGCCAGGGCT---------GCCGAGGTAGTTCCCGTCAACGGGGTCGCCTCCGTAGCGCCCGCGCCGGGCAATGCCAGGT
CGTCGGCGACGTCGTCCCAGCA------GCCTTGTGCCAATGCTGAGTCCGAGGCGCCTGACACATTGCGCGGCGGCCTG
CCGGAGCTCCACACTTCCGGGGAAATGGACGTGAGCACGTACTACGCGGACCTTGCGCAGGGGCTTCTCCTGGAGCCGCC
GCCATCGGCGGCCAGCGACTGCAACGACGG---CGGAGATGATGCGGTGCTATGGAGCCACTGAT---------------
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-----------------------------------
>SNPs
S-S--------S--------------S--SS-S-S-----S-------------S----------------------S--
---------------S----------------------S---------------------S----S---S---SSSSSSS
SSSSSS-------------------------------------S----------------S-------------S-----
S---------------------------S--------------------SSS--------------S--S----------
----S----------S--------SS----S----S---S-------S---------S-------S----S---------
----------S--S-SS----------------------SS--S--SS--------S-----------S-S-----S---
------------S----S--S----S-------------------------------S-SS-----------SS------
-S------SS-------S--------------------------------------------------------------
-S-----------------------S------------------S-----------------------------------
------------------------------S---------------------------S-----------------S---
--S-----------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------S-----
---S----------------------------------------------------------------------------
--------S----------------------S------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
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--------------------S------SSSSSSS----------------------------------------------
--------------------S-----------------------------------------------------------
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--S------------------------S---S------SS---------------------------------------S
--------SSS---S-S---S--------S------SSSSS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S-------------------------------
----SSSSSSSSSSSSS---------------S--S--------------------------------------------
-------S----S----S-----SSSS-----------------------------------------------------
----S-----S--------S----------------------S-------------------------------------
--------------------S----------------------------------------------S-----S------
--------------------------S--S---------------------------S-SS-SS----------------
------SSSS-S-SS--------------------------------------S--S--SSS---S--S-----------
---------SS----------S-------S-------S------S-------S--S-SS---------------------
--------S--------------------------------------S--------------------------------
----------S---------------------------------------------------------------------
-----------------------------S-----
>forward_554
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------------------------------------------------------GACGGAGGTAGTACCCGCTA------
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-----------------------------------
>reverse_3488
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-----------------------------------------------CAGGGACTCGAACTCGGATG-------------
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-----------------------------------
