>input_sequence_64342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATGGA
TGGACCTTGCAACAAGGCTCTGCGCCGTGAGGCCGCCGCCTGCGTCTGCCAAGGAGAAGAT---GATCACCCCGACGCTG
CTTCTTGCACCTCGC------CCTCAGGGGCGTCCAGCGGGTCGTCGTCGTGCTCATTGGCGTCGGATCTGGGTGATGGG
TCGAGTTACTCCCCGCCCGATGATCATTCCTCGGGGTCGTCTTCAGCGTCATCGAGCACCTTGCAGCTGGACTCTGAGGC
CGAGGGACCTCTCTACGAGCTGTCTTCGCTGCTAGCCCAGCTTCCTGCCAGGTAGAGTACATGCTTTGCACCTTGATAAC
ATGGAATTTGCCCGTTTGCGTTTCCCTACCTGTATGA-AAACACCAAAACTTTGTCACCCTTTCCAAGAACATGCATGCT
ACGCTAACAGGTCTTCAAATCGGATGGCCGAATTTAAAATGACATGCTCCTAAGTGATTAGCTTGTGAGGTCCCACTTTG
CACAGGACAAGTATTTAATTCATTGGTTATGAATATTTTCCTAAAATACATACTGA------------------------
--ATAACTAGAGAACACAATGTCACGCTTCTTTCCATATA-ACTTCTATAGAATCCACTTCATATTGCAAATTATTCAGA
CTACC------ATCTCTGACAAATAATTTAATTTCCACAGGAGAGGGTTGTCCAAGTACTACCAAGGGAAGTCCCAATCA
TTCACATCGATATCTTATGCTACATGTCTTCAAGACCTTGGAAAGGAAGTTACCTACAGCAAGAGGATGAAGACATGCAA
GAGCTATACAGCGGGATCAGGCATGAACCAGCGGTCAAATCACTCACCGAGGACATGCAACAAGATGATAGCCAAGAGGC
CCTCAAAAAGTTCATTTGCTTGTCAAATGTCCAGAGCAAGCAGCACCAACCTCTTGTTCAGGAGTGCCAATTTACCTGCA
CACCAGAACAAGGAAGATGTACAAATGCATATGAACTCTTAA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr2B_1_TraesCS2B01G520700
CGTGAGACAAATAGTGACCCGCACGAGCTAGCAATCATGGCTAGGGTCTTAATCGATCATTCGAATAGACTGTGGATGAT
GTATCTCTGTTTGAGTTGGAATAAAACTAGTCATGGTGATGCCACCTAG--AAAAGGCAAGTTTGACTCTGCTAGGTTTA
TCTTTTGCTTCAAGCCACACCAAGTAAACCTTTCTGGCAATTTTGCTAACAACT-----CACGTCGACAAAGTTGGTATC
TCCCAAACAAACAAACAGGCTTTAAACCATGCACCCCGTTTCCACCCTATCCAAATCGAGTCTGAGACCAGTT-AAAAAA
AACTTTGTTTGAGACAGCAATCGCATCAT-------------------------------------------CCGTCTTG
TACAAAAATTGAGACACTTATTTTGAGATGTTGGGAGTATATATTTGCGTGATTCTTTCTGTAGCA--AGCAGCTCTAGA
GACCCGAATAAACAAAGCTAATCTCGCGGCAGCAGTTACCAGCCCTTGGCATAAATCAAACTCCTAACTGAAAGCACCAT
GTCGCCACCGTAATCTATCTTATCCCGGCTAATCCGCGGAGATAAGCCCCCATTTTCTTCCTCACCCCCGCCGATCGGTC
GACAGAGTCCCCTAAGATAAGATGCTTATCCTCGTGAGCCAGTGTAGTT---------------CACATGCCCCGATTAT
ACATAATTGATTGCTCCCAGCAAGCAACACATGTTTCCGTCTCTTGCGCCCCCGG-AAACGAGTGTTTCCACATGCGCAA
ACACTCCAGACAGTAACGTA-----------------------GGTGATAAGACCGACGCTCTGCACGGCAAGGTCGCAA
GGATAGGCTTGGTTTTACTTTCGGCGC---------CAGTCGACGGAG-GCCTATCTGAA-CGAGCAAGACGCCCGCCTG
CCCACGGCAACGGTTCTTC------------TTTTTCCCCACCCCTCGCGTAGTAAAGTCTGCATATATATGGGGTCCTC
TCCTTTGCCGTCCAAGCTCCCAACATCCCAAGCCAAGAGATAACCATTGCCCGTGCCTCCTGTTCAGGCCCTGAAATGGA
TGGACCTTGCAACAAGGCTCTGCGCCGTGAGGCCGCCGCCTGCGTCTGCCAAGGAGAAGAT---GATCACCCCGACGCTG
CTTCTTGCACCTCGC------CCTCAGGGGCGTCCAGCGGGTCGTCGTCGTGCTCATTGGCGTCGGATCTGGGTGATGGG
TCGAGTTACTCCCCGCCCGATGATCATTCCTCGGGGTCGTCTTCAGCGTCATCGAGCACCTTGCAGCTGGACTCTGAGGC
CGAGGGACCTCTCTACGAGCTGTCTTCGCTGCTAGCCCAGCTTCCTGCCAGGTAGAGTACATGCTTTGCACCTTGATAAC
ATGGAATTTGCCCGTTTGCGTTTCCCTACCTGTATGA-AAACACCAAAACTTTGTCACCCTTTCCAAGAACATGCATGCT
ACGCTAACAGGTCTTCAAATCGGATGGCCGAATTTAAAATGACATGCTCCTAAGTGATTAGCTTGTGAGGTCCCACTTTG
CACAGGACAAGTATTTAATTCATTGGTTATGAATATTTTCCTAAAATACATACTGA------------------------
--ATAACTAGAGAACACAATGTCACGCTTCTTTCCATATA-ACTTCTATAGAATCCACTTCATATTGCAAATTATTCAGA
CTACC------ATCTCTGACAAATAATTTAATTTCCACAGGAGAGGGTTGTCCAAGTACTACCAAGGGAAGTCCCAATCA
TTCACATCGATATCTTATGCTACATGTCTTCAAGACCTTGGAAAGGAAGTTACCTACAGCAAGAGGATGAAGACATGCAA
GAGCTATACAGCGGGATCAGGCATGAACCAGCGGTCAAATCACTCACCGAGGACATGCAACAAGATGATAGCCAAGAGGC
CCTCAAAAAGTTCATTTGCTTGTCAAATGTCCAGAGCAAGCAGCACCAACCTCTTGTTCAGGAGTGCCAATTTACCTGCA
CACCAGAACAAGGAAGATGTACAAATGCATATGAACTCTTAACTAGCTACAACTAGAATGCCAGGACTCCACTTCCCATG
AACATACAGTACTTACTGTACACTTTCACATGGAAATTCAAACTAATTTCTCATTCTGAGATCAGCCTGATTTCTCTTAT
GTCTGATTTTATTTTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATATGAAAGTTAACTGTAAAAATGAA
TAAAGTGACACTTGGTCTAGTCATAATCGGAAAAACTCAATAGACACAGCTCCTTGTGTTAAACTTGCCCATGATGGTAG
GTGGTACACCATCTATTCTCTT---ATACACACG----ATGCCACAAGTTAGGGGAACCATTTATTAAGGAACGATAAGA
GATGTTCCTGAAAGCAACTGTACAGGTATTCTGTGGAAAATCAGTATTGCCATGAATGATTACGATGACATGTTCATCAG
AGTCAAGGGCCACAACATTCGCAAAAAGAGGGAGTCAAGGGCCACAAGAATATTTCTATTAGGTTATCACAAGTCGAAAC
ATGTGATTTCACTTGGTGTTTGTCTAAACAA----GCTCGTCTGGTTTTCTTTTCTCCTCACCTCCATGAAGGA-CATCT
GTTAACAACAAGAGAAAGGCTCTCATAAAAACCAATGAAACTACTACTACAAGAGCATGGTTTTAAACTTCAAAACCAAA
TCACCTGAAGGAG--ATCAAATTTGCCACTCCAACACCCACATCCCTTTTCCAAC--ATGCACAATGCACAAACCCTTTT
GGTAGCCAGCCCTAAAGGATAGTATCACAAACTTGCGACTCTCCATAGTTCCCAGACCACAATACCTTGTCTTTTGTAAA
TTCCATATATGACATTTCCTAGAATATCTGAAGCTCTCAATCAGCACTCTCTTGCTAAAGAATGCTTCG----TCATGTC
AGTTGGATCACTTGTTGCTTAGCCATCTGGTATAG-----TCTCCGACCGCCTCAAGATCAGACTGCATAAGCAGACATA
TAATGCTTGTAAATACATTCTAGTGGTGGTGATGCTTTCTAAGCGAGCACAATAGAAAGAT
>chr2A_53
----------------------------------------------------TCGACCATTCGATA-GATTGTGGATGAT
GCATCTCTGTTTGAGTTGGAATAAAACTAGTCA---TGATGCCACCTAG--AAAAAGCAAGTTTGACTCTGCTAGGTTTA
TCTTTTGCTTCAAGCCACACCAAGTAAACATTTCTGGCAATTTTGCTAACAACTGTGCTCACGTCGACAAAGTTAGCATC
TCC----CAAACAAACAGGCTTTAAGCCATGCACCCCGTTTCCACCCTATCCAAATCGAGTCTGAGACCAGTT-AAGAAA
AC--TTGTTTGAGACAT---------------------------------------------------------------
-----------------TTATTTTGGGACGGAAAGAGTATATATTTGCGTGATTCTTTCTGTAGC--CAGCAGCCCTAGA
GAACCGAATAAAC-AAGCCAATCTCGCAGCAGCAGTTACTAGCCCTTAGCGC-AATCAAACTCGTAACCGAAAGCACCAT
GTCGCCACCGTAATCTATCTTATCCCGGCTAATCCGCGGAGATAAGCCCC-ATTTTCTCCCTCACCCCCGCCGATCGGTC
GACAGGGTCCCGTAAGATAAGATGCTTATCCTGATGAGCCAGCGTAGTTTATCCACGTCCCTTTCACATGCCCCG---AT
ACATAATTGCTTGCTCCCGGCAACCAACACATGTTTCCGTCTCTTGCTCCCTCTGAAAACAAGTGTTTCCACATGCGCAA
ACGCTCCAGACAGTAGGAATGCCC-------AGTACTTCATTTGGTGATAAGACCGACACTCTCTGTACG------GCAA
GGATAGGCTTGGTTTTACTTTCGGCGC---------CAGTCGACGGAA-GCCTATCTGAAGCGAGCAAGACGCCCGTCTG
CCCACGGCAATGGTTCTTTTT---------TTTTTCCTCCACCCCTCGC--------GTCTGCATATATAGGGGGTCCTT
CCCTTTGCCGTCCAAGCTCCCAACATCCCAAG-----AGATAACCATTGCTCCTGCCTCTTGTTCAGC-CCTGTGATGGA
TGAAGCTTGCAACGAGGCTCTGTGCCGTGAG---GCCGCCTGCGTTTGGCAAGGAGAAGGAGAAGATCACCCTGACGCTG
CTTCTTGCACCTCGC------CCTCGGGAACGTCCAGCGGGTCGTCGTCGTGCTCATTGGGGTTGAATCTGGGTGATGGG
TCGACTTACTCCCCACCTGATGATTATTCTTCGGAGTTGTCTTCAGCGTCGTCGAGCACCTTGCATCTGGACTCCGAGGC
AGAGGGGCCTCTCTACGAGCTGTCTTCGCTGCTAGCCCAGCTTCCTGCCAG-----GTACATGCCATGCACCTTGATAAC
GTGGAATTTGGCCGTCTATGTTTCCCAACCTGTATGAGAAACACCAAAACTTTGTCACCCTTTCCAACAACATGCATGC-
----TAACAGGTCTT-------------CGAATTTAAAATGACATGCTCCTAAGTGAT-AGCTTCTGAGGTTCCACTTTG
CACAGGACAAGTATTTAATGCATTGGTTATGAATATTTCCCTAAAATACATACTGA------------------------
--ATAACCAGAGAACACAATGTCACGGTTCTTTCCATATA-ACTTCTATAGAATCCACTTGAAATTGCAAATTATTCAAA
AAAGGAGTGCGATCTCTAACAAATAATTTAATTTCCACAGGAGAGGGTTGTCCAAGTACTACCCAGGGAAGTCCCAATCA
TTCACATGGATATCTAATGCTACATGTCTTCAAGACCTTGGAAAGGAAGTTACCTACAGCAAGAGGATGAAGACATGCAA
GAGCTACGCAGCAGGATTAGGCATGAACCAGCGGTCAAATCACTTACCGAGGACATGCAACAAGATGATAGCCAAGAGGC
CCTCAAAAAGTTCATTTGCTTGTCAAATGTCCAGAGCAAGCAGCACCAACCTCTTGTACAGGAGTGCCAATTTACCTGCA
CACCAGAACAAGGAAGATGTACAAATGCATATGAACTCTTAACTAGCTACAACTATAATGCCAGGACTCCACTTCCCATG
AACATACAGTACTTACTGTACACTTTCACATGGAAATTCAAACTAATTTCTCATTCTGAGATCAGCCTGATTTCTCTTAT
GTCTGATTTTATTTTAGTCCACATGAAAGTTAACTGTAAAAATGAATAAAGTGACACCTGATTTCTCTTATGTCTGATTC
AAATGCATATGAACTCTTAACTAGCTACAACTATAATGCCAGAACTCCACTTCCCATGAACATACAGTACTTACTGTACA
CTTTCACATGGAAATTCAAACTAATTTCTCATTCTGAGATCAGCCTGATTTCTCTTATGTCTGATTTTATTTTAGTCCAT
ATGAAAGTTAACTGTAAAAATGAATAAAGTGACACCTGATTTCTCTTGTCTGATTCAAATGCATATGAACTCTTAACTAG
CTACAACTATAATGCCAGGACTCCACTTCCCATGAACATACAATACTTACTGTACACTTTCACATGGAAATTCAAACTAA
TTTCTCATTCTGAGATCAGCCTGATTTCTCTTATGTCTGATTTTATTTTAGTCCATATGAAAGTTAACTGTAAAAATGAA
TAAAGTGACACTTGGTCCAGTCACAATCGGAAAAACTCAATAGACACAGCTCCTTGTGTTAAACTTGCCCATGATGGT--
-----ACACCATCTATTCTCTTCTTATACACACG----ACGCCACAAGTTAGAGGAACCATTTATTAAGGAACAATAAAA
AATGTTCCTGAAAGCAACTGTACAAGTATTCTGTGGAAAATCAGTATTGCCATGAATGATTACGATGACATGTTCACCAG
AGTCAAGGGCCACAACATTCGCAAAAAAAGGGAGTCAAGGGCCACAAGAATATTTCTATTAGGTTATCACAAGTCGAAAC
ATGTGATTTCACTTGGTGTTTGTCTAAACAA----GCTCGTCTGGTTTTCTCTTCTCGTCACCTCCATGAAGTA-CATCT
GTTAACAACAAGAGAAAGGCTCTCATAAAAACCAATGAA---ACTACTACAAGAGCATGGTTTTAAACTTCAAAACAAAA
TTACCTGAAGGAG--ATCAAATTTGCCACTCCAACACCCACATCCCTTTTCCAAC--ATGCACAATGCACAAACCCTTTT
GGTAGCCAGCCCTAAAGGATAGTATCACAAAGTTGCGACTCTCCATAGTTCCCAGACCACAATACCTTGCCTTTTGTACA
TCCCATATATGACATTTCCTAGAATATCTGAAGCTCTCAATCAGCACTCTCTTGCTAAAGAATGCTTC----ATCATGTC
AGTTGGATCACTTGTTGCTTAGCCATCTGGTATAG-----TCTCCGACCGCCTCAAGATCAGACTGCATAAGCAGACATA
TAATGCTTGTAAATACATTCTAGTGGTGGTGATGCTTTCTAAGGGAGCACAATGGAAAGAT
>chr2D_65
----------------------------------------------------------------ATTGATTGTGGATGAT
GCATCTCTGTTTGAATTGGAATAAAACTAGTCT---TGATGGTGCTACCTAAAAAAGCAAGTTTGACTCTGCTAGGTTTA
TCTTTTGCTTCAAGCCACACCAAGTAAACATTTCTGGCAATTTTGCTAACAACTGTGCTCACGTCGACAAAGTTAGTATC
TCC----CAAACAAACAGGCTTTAAACCATGCACCCCGTTTCCACCCTATCCAAATCGAGTCTGAGGCCAGTTAAAGAAA
AC--TTGTTTGAGACAGCAATCGCATTCATGCTAGATGGTACTCCATCCATCTTACAATGCTAGATAGCACACCCTCCTG
TACAAAAGTTAAGACACTTATTTTGGGACGGAGAAA-TATATATTTCCGTGATTCTTCCTATAGCACCACCAGCCCTCGA
GACCCGAATAAACAAAGCTAATCTCGCAGCAGCAGTTACTAGCCCTTAGCAC-AATCAAACTCCTAACCGAAAGCACCAT
GTCACCATCGTAATCTATCTTA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr2D_432
CGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ATAAACAAAGCTAATCTCGCAGCAGCAGTTACTAGCCCTTAGCAC-AATCGAACTCCTAACCGAAAGCACCAT
GTCGCCACCCTAATCTATCTTATCCCGGCTAATCCGCGGAGATAAGCCCCCATTTTCTTCCTCACCCCCGCCGATCGGTC
GACAGAGTCCCGTAAGACAAGATGCTTATCCTGATGAGCCAGTGTAGTTTATCCACGTCCCTTTCACATGCCCCG---AT
ACATAATTGCTTGCTCCCGGCAACCAACACATGTTTCCGTCTCTTGCTCCCTCGG-AAACGAGTGTTTCCACATGCACAA
ACACTCCAGACAGTAACGTAACAGAAATGCAAGTAGCTCATTTGGTGATAAGGCCGACGCTCTGTGTACG------GCAA
GGATAGGTTTGGTTTTACTTTTCGGCGCCGGTCAGTCAGTCGACGGAGTGCCTATCTGAA-CGAGCAAGACGCCCGTCTG
CCCACGGCAACGGTGCTTTTTTTCTTTTTCTTTCTCCCCCACCCCTCCCGCAGTCGCGTGTGCAT--ATATGGGGTCCTC
TCCTTTGCCATCCAAGCTCCCAACATCCCAAGCCAAGGGATAACCATTGCCCCTGCCTCCTCTTCAGT-CCTGGAATGGA
TGAGGCTTGCAACAAGGCTCTGTGCCGCGAGGCCGCCGCCTGCGTTTGCCAAGGAGAAGGACAAGATCACCCCGACGCTG
CTTCTTATACCTCGCCCTCGGCCTCGGGAGCGTCCAGCGGGTTGTCGTCGTGCTCATTGACACCGAATCTGGGTGATGGG
TTGGGTTACCTCCCATCCGAAGATCATTCTTCGGAGTCATCTTCAGCGTCGTCGAGCACCTTGCAGCTGGACTCTGAGGC
CGAGGGACCTCTCTACGAGCTGTCTTCGCTGCTAGCCCAGCTTCCCGCCAG-----GTACATGCTTTGCACCTTGATAAC
GTGGAATTTCCCCGTTTGTGTTTCCCTACCTGTATGA--AACACCAAAACTTTGTGACCCTTTCGAACAACATGCATGCT
AG--TAACAGGTCTTCAAATCGGTTGGCCGAATTCAAAATGACATGCTCCTAAGCGAT-AGCTTGTCA------------
---AGGACAAATATTTATTTAATTGATTATGAACATTTTACTAAAATATACTCTATGGGACGGTGGGAGTACTTCATAAT
GGATTACTGGAGAACACAATCTCACGGTTCTTTCCATATAGACTTCTATAGAATCCACTTCAAATTGCAAATTATTCAAA
ACAGGGTA-CGGTCTCTAACAAATAATTTAATCTCCACAGGAGAGGGTTGTCCAAGTACTACCAAGGGAAGTCCCAATCA
TTCACATCAATATCCTACGCTACATGTCTTCAAGACCTTGGAAAGGAAGTTACGTACAGCAAGAGGATGAAGACATGCAA
GAGCAATACAGCAGGATCAGTCATGAACCAGCGGTCAAATCACTTACCGAGGACATGCAACAAGATGATAGCCAAGAGGC
CCTCAAAAAGTTCATTTGCTTGTCAAATGTCCAGAGCAAGCAGCACCAACCTCTTGTACAGGAGTGCCAATTTACCTGCA
CACCAGAACAAGGAAGATGTACAAATGCATATGAACTCTTAACTAGCTACAACTAGAATGCCAGGACTCCACTTCCCATG
AACATACAGTACTTACTGTACACTTTCACATGGAAATTCAAACTAATTTCTCATTCTGAGATCAGCCTGATTTCTCTTAT
GTCTGATTTTATTTTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTCCAT
ATGAAAGTTAACTGTAAAAATGAATAAAGTGACAGA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGGTCCAATCATAATCGGAAAAACTCAATAGACACAGCTCCTTGTGTTAAACTTGCCCATGATGGT--
-----ACACCATCTATTCACTTCTTATACACACACACAACACCACAAGTTAGGGAAACCATTTATTAAGGAACGATAGGA
AATGTTCCTGAAAGCAACTGTACAAGTATTCTGTGGAAAATCAGTATTGCCATGAATGATTACAGTAACATGTTCATCAG
AGTCAAGGGCCACAACATTCGCAAATAAAGC-AGTCAAGGGCCACAAGAATATTTCTATTAGGTTATCACAAGTCCAAAC
ATGTGATTTCACTTGGTGTTTGTCTAAACAA----GCTCGTCTAGTTTTCTTTTCTGTTCACCTCCATGAAGGACCATCT
GTTAAAAACAAGAGAAAGGCTCTCATAAAAACCAATGAAACTACTAC---AAGTGCATAGTTTTAAACTTCAAAACCAAA
TTACCTGAAGGAG--ATCAAATTTGCCACTTCAACACCCACATCCCTTTTCCAAC--ATGCACAATGCACAAACCGTTTT
GGTAGCCAGCCCTAAAGGATAGTATCACAAACTTGCGACTCTCCATAGTTCCCAGACAAGAATACCTTGTCTTTTGTACA
TTCCATATATGACATTTCCTAGAATATCTGAAGCTCTCAATCAGCACTCTCTTGCTAAAGAATGCTTTG----TCATGTC
AGTTGGATCACTTGTTGCTTAGCCATCTGGTATAG-----TCTCCAACCGCCTCAAGATCAGACTGCATAAGCAGACATA
TAATGCTTGTAAATACATTCTAGTCGTGGTAATGCTTTCTAAGCGAGCACAATAGAAAGAT
>chr3B_2396
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCAAGGGCCACAAGAAAATTCATATTAGGTCATCACAAGTTAAAAA
ATGTGCCTTCAGTTGGTGTTTTTCTTCATGGATAGGCTCGTCTTGTTTTCTTTTCTCTTCACCTCTATGAAGGA-TATCT
GTTGACAACAAGAG-AAGGTTCTCATCAAAACCAATGAAAATACTAC---AAGTACATAATTTTAAAATTTAAAACCACA
TAACCTGAAGTAGACATCAAATTTTCCACTCCAACACCCACATCCCTTCCCCGAGGTATACAAAATGCACAAAACCTTTT
GGTAGCCAACCCTAAAGGATGGTATCACAAACTTGCGACTTTTCGTTTTTTCCGGACCACAATACATTTTCTTTTATTCA
TTTCATATGTTTCATTTCCTAGAATATCTGAAGCTATC-ATCAGGACACTCTTGGTAAAGAATGCTTCAGTAATCATGTC
AGTTGGAGTACTTATTGCTTAGCCATCTGGTAGTCTCCACTCTCCAATAGCCTCAAGATCAGACTGCATAAGCAGACATA
CTAGTTGTAAAC--ACATTATGGTGGTGGAGATGCTTTCTAAGCGAGCACAA---------
>SNPs
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---------S--S----------
-S-------------------------------SSS-------------------S------------------------
-----------------------------S--------------------------------------------S-----
---SSSS---------------------------------------------------------------------S---
-SSS----------------------SSS---------------------------------------------S--S--
-------S--S--------------S--S-SS-S----------------------------------------S-----
---------------------------S-----------S-------S---SS---------------S-----------
--------------------------------------------------------------------------------
-----------S--------------------SS-----------------------------------------SSS--
---------S--------S----S-----------------------S---S----------------------------
----------------------------------------------------------------SSSSSSSSSSSS----
----------------------------------------------------------------------------S---
------------------S----------------S--------------S---SSS-----------------------
----------------------------------------------------S--------------SS----S------
--S-S-----------------S----------------------S-------------SS-------------------
-------------------------S--S------------------------------------S--------------
--------------S--------------S----S---------------S-----------------------------
---------------------------------------------------SSSSS------------------------
S-----------------S------------------------------------------------S------------
-SSS-------------------S----------------------------------S------------S--------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------S---------------S-
SS-SS------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------S-----------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S-S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S------------------------------------------------------------SS
SSSSS----------------------------------S----------------------------------------
S-----------------------S-------------------------------------------------------
---------------------------S----------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_716
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTGTAGTTCACATGCCCCGA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_2840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGCCACAAGTTAGGGGAACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
