>input_sequence_64303
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-----------------------------------------------ATGGGTGTTCCTATACAAGCCAGCGTCCCGGTC
GCGTCGCTTTCAACAATCCGG----CAATCACGCCCTCCACCTACGTACCAA----CAATTCATGGGCGCCGCCGTGATG
GAGCAGCGACGCGGCGGCAAGCCCAAGGTGGTGTTCGTGCTGGGCGCGACTTCCACGGGCAAGTCCAAGCTGGCCATCGC
CCTGGCGGCGCGCTTCGGCGGCGAGGTGATCAACTCGGATAAGATCCAGGTGTACGCTGGCCTCCCCGTGATCACCAACA
AGGTGACGGACGAGGAGTGCGCGGGCGTGCCGCACCACCTCCTCGGCTGCGTGCCGTGCCCCGACGCTGACTTCACCGTC
GACGACTTCTGCAGGGAGGCGGCTGACGCGATCAAGCGCGTTCTCTCCAACGGCGGCCTCCCCGTGGTGGCCGGCGGCTC
CAACCGGTACGTCAATGCGCTCGTCGAAGGAGACGGCGGCGCCTTCCGCTCCTCCCATGACTGCCTCTTCGTCTGGCTTG
ACGCCGCGCCGGAAGTCCTCCGCCGGTCCACGGCCGTACGGGTGGACGATATGGTGCGGCGCGGGCTGGTGGAAGAGGCA
CGCGCGGCGTTCGACCCGGACGCCAGCTACACCCGGGGCGTGCGCCGCGCCATCGGCCTGCCGGAGATGGACGCGTACCT
GCGACGCGCGAGCGACGGCGATGACGACGGCGCACCGGCGATGCTGGGGAGAGCGGTGGAGGATATCAAGGTTAACACGT
TCGGGCTGGTGCTGGAGCAGGTGGAGAAGATCCGGCGGCTAAGCACGCTGGAGGGGTGGGACGTCCGGCGGGTGGACTGC
ACAGAGGTGCTGGCGCGGATGGCTGACGGCGAAGGGGTGCAGGAGCTATGGCGGAAGGTTGTCTGGGAGCCCGTCGAGGA
CATGGTGCGGACCTTCGTCATCGCGGAGAAGAGCAGTGGGAAGATCAACCTGCTGCCCTAG-------------------
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-------------------------
>chr5D_1_TraesCS5D01G185500
CAGCACTGCTGAAGTCAAGACGATTAACA-CCTAAAAATCTAAGCTAGTAAAGCCTAAAATGAATTACCAACGATTGAGG
TCGCTACTGGAGGGGAGTTTGCCTCTGCTTTCTTCTTCAAGAAAGAAATGAAAGCGAAAACTGGAGCGCTCTATGCGTCG
GCCGACGGATAATTAGAAAAGATTTGCCGGCTCGCTGACCATTTTGATGTACACGTTAACGGCTGTTCGATATACCCCGT
ATGTAAGCAGCCACTTCTTTGCAACAAGGGTAGTGCCGTAGAAGGCCCTTCACAACAACCAGCTTATTGTAATCATCCAA
GTATGTACTTCTTTATTTTTTGTC---------TTGCTGCAGAAATTTGTCGCAACAAAGGTCTTGTTGTAGA-TTTT--
-------TTTTGTTTGCAACAAAGATCTAGTTGGAGAATTTTTTCGTAACAACAGTTTTATTGCAGAAATTTTAGATATC
GATTGAAGAAACCCTTTTGCAACAGGGGTCATGTTGCAGATT--TTTGTGCAACAGAGTACATGTTACC------TTTTT
TTTTGCTAATAGAGACCGTGACGTGAAGGGGATGGTGTTGACGGCAGGAGGAGCTTGAGGTGGTGGCGGCCATGGCCGGC
CACGGCTAAGGCGGGCGTTGCTGCAGGAGCTTGAGGTGGTCACGGGCACGGCCGAGGCGGGCGTACGTTGCTGCAGGAGC
TTAAGATGGTGGCGGCCATGGCGGGCGTTCCTGAAGGAGATGGTGGTGGACGAGGCGGGCGTTGCTGCGTATGGGACAGA
GGTTGAGGA----------------AGAGA------GGTAGTCCAGTAGGC-ACGTGGCGCGCAACCAAGACG-------
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----------------GCGGACGCGAGCGCTATAATCCGCCTGTTGATGTTAATCATGTCCCATGATAAT-----ATTAT
AATTGGTGTATTCTCAATGAAGTAAATATGGAAAGTAAATGCGGTATCCCTAGCATTGATGTGG----TATAAACCAAAA
TTATGGGAGAAATCCTCG----TATTTATACCATTCCATATTCGTGCATGGGTGTTCCTATACAAGCCAGCGTCCCGGTC
GCGTCGCTTTCAACAATCCGG----CAATCACGCCCTCCACCTACGTACCAA----CAATTCATGGGCGCCGCCGTGATG
GAGCAGCGACGCGGCGGCAAGCCCAAGGTGGTGTTCGTGCTGGGCGCGACTTCCACGGGCAAGTCCAAGCTGGCCATCGC
CCTGGCGGCGCGCTTCGGCGGCGAGGTGATCAACTCGGATAAGATCCAGGTGTACGCTGGCCTCCCCGTGATCACCAACA
AGGTGACGGACGAGGAGTGCGCGGGCGTGCCGCACCACCTCCTCGGCTGCGTGCCGTGCCCCGACGCTGACTTCACCGTC
GACGACTTCTGCAGGGAGGCGGCTGACGCGATCAAGCGCGTTCTCTCCAACGGCGGCCTCCCCGTGGTGGCCGGCGGCTC
CAACCGGTACGTCAATGCGCTCGTCGAAGGAGACGGCGGCGCCTTCCGCTCCTCCCATGACTGCCTCTTCGTCTGGCTTG
ACGCCGCGCCGGAAGTCCTCCGCCGGTCCACGGCCGTACGGGTGGACGATATGGTGCGGCGCGGGCTGGTGGAAGAGGCA
CGCGCGGCGTTCGACCCGGACGCCAGCTACACCCGGGGCGTGCGCCGCGCCATCGGCCTGCCGGAGATGGACGCGTACCT
GCGACGCGCGAGCGACGGCGATGACGACGGCGCACCGGCGATGCTGGGGAGAGCGGTGGAGGATATCAAGGTTAACACGT
TCGGGCTGGTGCTGGAGCAGGTGGAGAAGATCCGGCGGCTAAGCACGCTGGAGGGGTGGGACGTCCGGCGGGTGGACTGC
ACAGAGGTGCTGGCGCGGATGGCTGACGGCGAAGGGGTGCAGGAGCTATGGCGGAAGGTTGTCTGGGAGCCCGTCGAGGA
CATGGTGCGGACCTTCGTCATCGCGGAGAAGAGCAGTGGGAAGATCAACCTGCTGCCCTAGAGGATAGAGCAACTCCTGT
GTTAGTTTTGGCGCGCTCTGTTAGTTTTGAATTGTCCACCGGGTTTTCTTAGT-AAACTTGTCGAAGAAACGTGAGGAGC
TTCATCGTGAAGGAGAGACCTAGCATATATACACATATACTCCTTTATTGCGTTTCCAAAAAAATAATATTGCGGAATGA
CCTATTTCGAACTTTCACTACATGAAAATAGCTTGCCGCCGTGTGTGGGGCTGTAAGCCAGGTGCAATTTTTCAGTCACT
CAGGCTTACATTCCTCTAAGCCGAGTAACACCGTCGAATTGTCTTATGCGGTCATTTTTTATCCCTCGTCCAATACTTTA
TAGTTACATATATATTAAGTGAGAGTATTATGATAAATACTTCGGAATAGTACATGAGATGAACATC-------------
--------------------------------------------------------------------------------
--------------------GGACCCTGTGACGTTTTGCCCCGAAGT---------------------------------
--------------ATATATTTTATAATAAAGTTGATTAACCTTGAAGATTTTGAATATGCATATGAACAGCCAACCACC
AGGGTGAGAATATGTCCATCGTACGTACTTACATATGCACTAAGGGTTGTACGCGTTACACTGCGTTGTTGATGTTGTTG
GTTTACCATGTGGGGAAGGTGATGAAGTATGTTTTCTTTTCCATGATGCGGTGTTTCGGTGGACTTTCTTGACGGTGTGA
TTTTGTGTTTCAACCAATAATTATGTGGAGAAGTTTTTTACTTTGGTGTCCGCATGTATTTTATTTGTCTCACAGTGTCA
CTTGTTGGAGCTT-TTTTTTTAGATGGCGAGAGGGTGCACAAGCCTGATGTATTTTTACGGATTGGTTGCTGCC-ATTAA
TTTGAGATA-CATTGTCCTAGTAAAAATCATGAATTAAATCCCCTAACTAAATGAGAGCTCGTCGGTCCAAATCATAAAT
CAATCCAAAATTGAACAGCTCAGTTGAATGGCAAAGCTTCAAAAGTAAGGAGCATAGTGAATTAGATGACACGCTTTAGT
TTAGGATATATATACATTAACAATA
>chr5A_2
-AGCACTACTGAAGTCAAGACGATAAACACCCTAAAAATCTAAGCTAGTAAAGCCTAAAATGAACCACCAACGACTGAGG
TCGCTACTGGAGGTGAGATCGGCTCGAGAG-------------AGAAAGGAAAGCGAAAACTGGAGTGCTCTACGCGTCG
GCCGGCGGATAATTAGAAAAGATCCTCTGGCTCGCTGATCATTG-GATGTACATGTTAACGGCTGTCCGATCTACCCCGT
ACGTAAGCAACCACTTCTTTGCAACAAGAGTGGTGTCGTAGAAGGCCCTCCGCAACAACCAGTTTGTTGCAATCATTCGA
GTTTGTACTTATTTATTTTTTGCAATGAAGGTTTTGCTGCAGAAATTTTTCGCAACAAAAGTCTTGTTGCAGAATTTTTT
TAATATATATTTTTTGCAACAAAGTTCTAGTTGCATATTTTTTTTGTAGCAGCGGTTTTGTTGCAGAAATTTTAGATATC
AATTGCAGAAATCCATTTGCAACAGGGGTCATGTTGCGGAAT--TTTGTGCAACAGAGTTCATG---------TTTTTTT
TTTTGCAAATAGAGACCGTGACATAAAGGAGATGATGCTAACGACAGGAGGGGCTTGAGGTGGTGGCGGCCATGGCCGAC
CACGGCCAAGGCAGGCGTTGCTACATGAGCTTGAGGTGGTGGCGGGCACGGCCGAGACGGGTT-----------------
------------------------GCGTTGCTGAAGGAGATGGTGGTGGACGAGACGGGTGTTGCTTGTATGGAA-----
-----AGGAAGAGATAAGATGAGGGAGAGA------GGTAGTCCAGTAGGC-ACGTGGCGTGCAACCAAGACGGCGGACG
CGATGAGAGAGGATTTTCTGGACCCTGGTCCAGCCGCATCTATAGTCAGCATCGTTGGATCTAAGAACGTTAACCTAGGG
ATATGGGCCAGATTAGCAGAGATAGAGATCAGTTATGCTAATATGGACCGCTAACGGTTCTTGAACTTTGGACCATAGGT
GCTAGAGCCCATTAAAAAATGGTGCCAAAGACGTCTATGTGTCGATTTGCAACGTGGATGATTCACACAACTACCAAAGC
AGGAGATTCTTAGGAAAAAAACCCTATCAAAGCAGGCATGCATGCCAGCACGCTGACGTGAAAAATATGCTGACACACAT
TTTTATTTCATCTGTGTTCGTATTTTTCTCTCGTGTTCCACCAACATGTATGTTTCTGCTTTTTAGAGAATTACAAAAGT
CTGACACACATGTCTTTTTGAGCTCTGACTTTATATCTTTTCTTGCACAGACAACCACAAATGCCATTTCTTGGTGAAAA
ATTACAAGCAAGCAGAACACATTCTGATGTTCACCGCCAGAAATTTCAGTTTTTTTCCTTTTCTTACATTTTTGGATTTT
ACTGTTTATATGGGTGCATTTGAGTTTGGAAATAGAAAATTCATGTCTGAAAAGACAAACACAAAACATTATAATATTTT
AGGAGCAAAAGAAAAATCACGTTTGGAAGTAAAAATTTCATATTTCTTAATTAATATATTCTCGTTTCACCCGCAAAAAG
TAGAAATTTCATGTTAATTTATATCTTTTACAAGAATAACATGTGTATCGTTCCCCGCAAAAAAAGTAACATGTGTATCG
TAAAAAAAATGTTTACCTAGTACTCCATCCATTCGAAAATACTTGTCATCAAAATGAACAAAAAGAATATATCTAGAACT
AAAATACATCTAGATATATCCATTTTTATTCATTGCGATGATAAGTATTTTTGGACGGAGGAAATACAGTCTATCATTTT
TCACTACCCGCTCCATGGTCTTGGACAATAAAATAAGTCCAGCTACAGTCGCTAAGTCGTATCCTTCGTTGTGGTGCAAT
CTAGACAGTAAAAAATACCTATATGATTAAAATGGTATAGCCTTCACCCGCAAAAAGAAGAAGATGGTATAGCCTTATTA
GATAGCAGCATGCACATTATGAACATGGATTATAGAATGTAAGTGGAGGGCTTGGAGCGTGGGTTCGGCTAGACCATGGT
CTAGCAACATATTTGCGCGGACGCGAGCGCTATAATCCACCTGTTGATGTTAATCATTTTCCATGATAATACTCCATTAC
AATT-GGGTATTCTTAATGAAGTAAATATGAAATGAATTAAATATCATAATCTCTGCGCATTGATTGGTAGTATTATATA
TATCAATGCGTAGAGATTATAATATTTAATTAATTCCTATTTCGTGCATGCGTGCTCCTATAAAAGCCGGCGTCCCGGTC
GCGTCGCTTTCAACAATCCAGCTGTCAATCACGCTCTCCACCTACGTACGAACAGTCAATCCATGGGCGCCGCCGTGATG
GAGCAGCGACGCGGCGGCAAGCCCAAGGTGGTGTTCGTGCTGGGCGCGACATCCACAGGCAAGTCCAAGCTTGCCATCGC
CCTGGCGGCGCTCTTCGGCGGCGAGGTGATCAACTCTGACAAGATCCAGGTGTACGCTGGCCTCCCAGTGATCACCAACA
AGGTGACGGACGAGGAGTGCGCGGGTGTGCCGCACCACCTCCTCGGCTGCGTGCCGTGCCCCGACGCTGATTTCACTGTC
GACGACTTCTGCCGGGAGGCGACTGACGCGATCAAGCGCGTTCTCTCCCGCGGCGGCCTCCCCGTGGTGGCCGGCGGCTC
CAACCGGTACGTCGAGGCGCTCGTCGACGGAGACGGCGGCGCCTTCCGCTCCTCCCATGACTGCCTCTTCGTCTGGCTGG
ACGCCGCGCCGGAAGTCCTCCGCCGCTCCACGGCCGTACGGGTGGACGACATGGTGCGGCGGGGGCTCGTGGAGGAGGCC
CGCGCGGCGTTCGACCCGGACGCCAGCTACACCCGGGGCGTGCGCCGCGCCATCGGCCTGCCGGAGATGGACGCGTACCT
GCGACGCGCGAGCGACGGCGATGATGACGGCACAGCCGCGATGCTGGGGAGAGCGGTGGAGGAGATCAAGGTTAACACGT
TCGGGCTGGTGCTGGAGCAGGTGGAGAAGATCCGGCGGTTGAGCACGCTGGAGGGGTGGGACGTCCGGCGGGTGGACTGC
ACAGAGGTGCTGGCGCGGACGGCGGACGGCGAAGGGGTGCAGGAGCTATGGAGGAAGGTTGTCTGGGAGCCCGTCGAGGA
CATGGTGCGGACGTTCGTCATCGCGGAGAAGAGCGGTGGGAAGATCAACCTGCTGCCCTAGAGGATAGAGCAACTCCTGT
GTCAGTTTTGGCGCGCTGTGTTAGCTTTGAATTGTCCACCGGGTTTTCTTAGTAAAACTTGTCGAAGAAACGTGAGGAGC
TTCACCGTGAAGGAGAGACCTAGCATATATATACATATAAAAGATAATAGTACTGCAGAT---------TTGCAGAATGG
CCTATTTCGAACTTTCACTACATGAAAATAACTTGCCGCCGTGTGTGGGGCTGTAAGCCAGGTGCAATTTTTCAGTCACT
CAGGCTTACATTCCTCTAAGCCGAGTAACACCGTCGAATTGTCTTATGCGGTTTTTTTTTATCCCTCATCCAATACTTTA
TAGTTATATGTACTCCTTCTATTTCTAAATATAAGTCTTTGAAAAGATTTCACTATGGACCACATACAAAGCAAAATGAG
TCAATCTATACTCTAAAATGCATCTAGATACATCCGTATGTTGTCTATAGTAAAATCTCTACAAAGACTTACATTTAGGA
ACGGAGGAAGTATTATGTGAGGACCCTGTGACATTTTGCCTCGAAGTCTGTCTGATAGCTCCCTCAATTTTATCTTGATA
TTCTTCGTTCGATCATATACTCTATAATA----------------AAGATTTTGAATATGCATATGAACAGCCAACCACC
AGGGTGAGAATATGTCC---------------------------------------------------------------
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>chr5B_341
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---------------------GTC---------TTGCTGCAGAACTTTGTCGCGACAAAGGTCTTGTTGCATTTTTTT--
-------TATTTTTTGCAACAAAGATCTAGTTGCAAAAAAATTTTGT---AACGGTTTTGTTGCAGAAATTTTAGATATC
AATTGCAGAAACCCTTTTGCAACAGGGGTCATGTTGCAGAAT--TTTGTGCAAGAGAGTACATGTTACCCTTTTTTTATG
TTTTGCAAATAGAGACCGTGACGTGAAGGGGATAGTGCTGACGGCAGGAGGAGCTTGAGGTGGTGGCGGCCATGGCTAA-
--------AGGCGGGCATTGCTGCAGGAGCTTGAGGTGGTCGCGGGCACGGCCGAGGCAG----ACGTTGCTGCAGGAGC
TTGAGATGATGGCGGCCATGGCGGGCGTTGCTGAAGGAGATGCTGGTGGACGAGGCGGGCGTTGCTGCGTACGGGACAGA
GGTTGAGGA----------------AGAGA------GGTAGTCCAGTAGGC-ACGTGGCGCACAACCAAGACG-------
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----------------ATGGACGCGAGCGCTATAATCCACCTGTTGATGTTAATCATTTCGCATGATAAT-----ATTAT
AATT-GTGCATTCTCAATGAAGTAAATATGAAAAGTAAATACCTGCAGGATCTCTACTGATTTGATATTATAAAACAAAA
TTATGGTAGAAATCAG-G----TATTTATTTCATGCCTATTTCATGCATGCGTGTTCCTATAAAAGCCAGCGTCCCGGTC
GCGCCGTTTTCAACAATCCGG----CAATCACGCCCTCCACCTACGTACCAA----CAATCCATGGGCGCCGCCGTGATG
GAGCAGCGACGCGGCGGCAAGCCCAAGGTGGTGTTCGTGCTGGGCGCGACTTCCACGGGCAAGTCCAAGCTGTCCATCGC
CCTGGCGGCGCACTTCGGCGGCGAGGTGATCAACTCGGATAAGATCCAGGTGTACGCTGGCCTCCCCGTGATCACCAACA
AGGTGACGGACGAGGAGTGCGCGGGCGTGCCGCACCACCTCCTCGGCTGCGTGCCGTGCCCCGACGTTGACTTCACCGTC
GACGACTTCTGCAGGGAGGCGGCTGACGCGATCAAGCGCGTTCTCTCCAACGGCGGCCTCCCCGTGGTGGCCGGCGGCTC
CAACCGGTACGTCGAGGCGCTCGTCGAAGGAGACGGCGGCGCCTTCCGCTCCTCCCATGACTGCCTCTTCGTCTGGCTTG
ATGCCGCGCCGGAAGTCCTCCGCCGGTCCACGGCCGTACGGGTGGACGATATGGTGCGGCGCGGGCTTGTGGAAGAGGCA
CGCGCGGCGTTCGACCCGGAGGCCAGCTACACCCGGGGCGTGCGCCGTGCCATCGGCCTGCCGGAGATGGACGCGTACCT
GCGACGCGCGAGCGACGGCGATGACGACGGCGCGGCGGCGATGCTGGGGAGAGCGGTGGAGGAGATCAAGGTTAACACGT
TCGGGCTGGTGCTGGAGCAGGTGGAGAAGATCCGGCGGCTGAGCACGCTGGAGGGGTGGGACATCCGGCGGGTGGACTGC
ACAGAGGTGCTGGCGCGGACGGCGGACGGCGAAGGGGTGCAGGAGCTATGGAGGAAGGTTGTCTGGGAGCCCGTCGAGGA
CATGGTGCGGACCTTCGTCATCGCGGAGAAGAGCGGTGGGAAGATCAACCTGCTGCCCTAGATGCTAGAACTACTCATGT
GTTTGTTTTGGCGCCCTGTGTCAGTTTTGAATATCGAAGAAAT-----------------------------TGAGGAGC
TTCATCGTAAAGGAT-----------------ACATATACTCCTTTATTGCGTTTCCAAAGAAATAATATTGCAGAATGA
CCTATTTCGAACTTTCACTACATGAAAATAACTTGCCGCCGTGTGTGGGGCTGTAAGCCAGGTGCAATTTTTCAGTCACT
CAGGCTTACATTCCTCTAAGCCGAGTAACACCGTCGAATT----------------------------------------
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--------------------GGACCCTGTGACATTTTGCCCCGAAGTCTGTCTGATAGCTCCTTCAATTATATCTTGACA
TTGTTGGTTCACCAGAAGAAGATGAT----------TTAACCTTGAAGATTTTGAATATGCATATGAACAGCCAACCACC
GGGATGAGAATATGTCCATCACACGTATTTACATATGCACTAAGGGTTGTACGCGCTTCACTGCGTTGTTGATGTTGTTG
GTTTACCATGTGGGGAAGGTGATGAAGTTTTTTTTTT----CATGATGCGGTGTTTCAGTGGGCTTTCTTAACGGTGTGA
TTCCGTGTTTCAACCAATAATTATGTGGAGAAGTTTTTTACTTTGGTGTCCGCATGTACTTTATTTGTCTTACGGTGTCA
CCTGTTGGCGTTTCTTTTTTTAGATGGCGAGAGGGTGCACAAGCCTGATGTATTTTTACGGATTGGTTGCTGACGATTAA
TTTGAGAAATCATTGTCCTAGTAAAAATGGTAAATTAAATCCAAAATTGAATGGTCA------------AAATCATAAAC
CAATCCAAAATTGAATAGCTCAGTTGAATGGCAAAGCTTCAAAAGTAAGGAGCATAGTGAATTAGATGATACACTTATTT
TAGGA--------------------
>chr3B_342
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----------------------TC---------TTGTTGCAGAATTTTTTTGCAATAAAAATCTTGTTGCA---------
-------TTTTTTTTGCAACAAAGGTCTTATTGCGGAAATTTTTCGTAACAAAGGTCTTATTGCAGAAATTTTAAATATC
GACTGCAAAAATCTTTTTGCAACAAGGGTCAAGTTGCAGATTATTTTTTGCAACAGAGTTCATATTGGAG-----TTTCT
TTTTTCAAATAGAGACCATGACATGAAGGAGTTGGTTCTGACGGCAGGAAGAT----------------CCATGGCCG--
--------AGCCGGGCGTTGCCGCAGGAGCTTGAGGTGGTCGTGGGCATGACCGAAGCTG----GCGTTGCAGCAGGAGC
TTAAGATGGTGGCGGCCATGGCGAGCGTTGCTGAAGGAGATGGTGGTGG---------------CTGCGCACGGGAAA-A
GGTTGAGGAAGAGATAAGATTAGGGAGAGAAACGTGGGTAGTCCAGTAGGCCACATGTCGCGCAACCAGGATG-------
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----------------GCGGACGCGAGCATGATAATCAATCGGTTAATGTTAATCATTTCTCAT----------------
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>SNPs
S------S----------------S---------------------------------------SS--------S-----
-------------S---S-S-S---SSSSSSSSSSSSSSSSSS-----S-----------------S------S------
----S------------------SSS-S----------S----SS--------S------------S----S--------
-S-------S------------------S--S---S-------------S-S----------S--S---S------S-S-
--S-------S----------------------------------------------------------S----------
-----------S---------------------S-------------------S--------------------------
-----S--------------------------------------------------------------------------
------S------------------------------S----------------------------------------S-
------S----------------------------------S-------------------SSS----------------
-----------------------------S-----------------------------------------S--------
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--------------------------------------S------------------S----------------------
----S-------------------------S---------S-SS-SSSSS-SS-SSS-SSS-------------S-----
------S-------SSS------------SS------SSS----------S-----------S-----------------
------------------------------------------------------------S-------------------
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-----------S--------------------------------------------------------------------
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-------------S-S----------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
----------------------------------S----------------------------S----------------
----------------------------------------S---------------------------------------
-------------------S---S---------------------------S----------------------------
----------------------------------S---------------------------------------------
-----------------S--------------------------------------------------------------
-------------------------------S----------------------------S------------S------
------------------------------S-------------------------------------------------
----------------------------------------------------SS-------------S------------
------S--S--SSSSSSS-SSSSS--SSSSS-SSSS-SSSSSSSS--SSS--SSSS--SS-SSSS--------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-------------------S-S-------SSSSSSS--------------------------------------------
--------------------SS-----S---------------------------S-S----------------------
----------------------------S-S----S-SSSS----------------S----S-------S---------
--SS------------------------------------------------------S-----------S--S------
-S------S-S-------------------------------------------------------------S-------
-------S--------------------SS-S----------SSS-SSS--SS-SS-SSSSSSSSSSSS----------S
---------------S-----------------------------------------------------S--S---SSS-
-SS-SSSSSSSSSSSSSSSSSSSSS
>forward_100
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TCGCTACTGGAGGGGAGTTT------------------------------------------------------------
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>reverse_3235
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----------------------------------AGTGGGAAGATCAACCTGCTG-------------------------
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>forward_102
--------------------------------------------------------------------------------
--GCTACTGGAGGGGAGTTTGC----------------------------------------------------------
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>reverse_3298
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-----------------CTGTTAGTTTTGAATTGTCCACCG---------------------------------------
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-------------------------
