>input_sequence_64287
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-----------------------------------------------ATGTCCGCCGC---GCCCACCATGTCCCCGGTG
ACCACGGCCGACGACGACGAGATCCTGTACGAGTCCATGCCACGCCTCCGCGTCTACAAGAGCCGCGTGGAGCGCTACCT
GGTGGGCTCCGAGTTCGTCGCCGCCTCCACCGACGCCG------CCACCGGGGTCGCCTCCCGCGACACCGCCATCTCCC
CCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTGGACGCCGACGCCGTGG---ACGGCACGCTCCCTGTCCTCGTCTAC
TACCACGGCGGCGGGTTCTGCCTCTTCTCCGCCTTCGACTCCACCTACCACGCCTACCTCAACGCCTTCGCCGCGCGCGC
CAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCCGAGCACCCCGTACCCGCCGCGTACGCGGACTCATGGGAGG
CGCTCGCGTGGGTTTTCTCCCAC---------AGCGCCGGCGCCGG---TGA---CGAGCCGTGGCTCGCCCGCCACGCC
GACCTCTCCCGCCTCT--------ACCTTAGCGGCGACAGCGCCGGCGCCAACATCGCGCACCACATGGCCATGCGGGCG
GGCGCCAGCG---------------------TCCGGGGCCTCGTCCTGGTGCACCCCTACTTCCTGGGGAGCGACGAGGT
GGGCTCAGACGGCCTGGACCCGGCGGCGCGGGAGCGGCTCGGGAGGCTGTGGCGCGTCGCGTGCCCGGCCGCCGCGGGGG
AGGACGACCCGCTCATCAACCCGCTCGCGGACGGCGCGCCGGGGCTCGAGGCCCTGGCGTGCGGGCGCGTCCTCGTGTGC
GTCGCCGGGGTGGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCGGGGCCAGCGGGTGGCCTGGCGAGGT
GGAGATGTGGCAGGCGCCGGGCAAGGGGCACAGGTTCCACCTGCTGGAGCCGGGCTGTGACGAGGCCGCCGAGCAGGACA
AGGTCATCAGCGGCTTCCTCAACCGCTGA---------------------------------------------------
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---
>chr2D_1_TraesCS2D01G498000
CGATTCAACTAAAAAAAATGAAGAGCGCCCGATGATGGACCGACAAGGAAACGCGAGTGGGCTTGGTACATGGGCCGATG
ATTAAGCCGCGCTGCGTATACTGGGCCAGAAGATGCTTAATTAGGCTCAATATTAAGCCATCGTGCGGGGGTACTGACCA
CATTGTCCCACCTCGAGATCCCAGCTCAGGGAACACCGCTTTAAACAAGGCTCCGTTTGAGATGCTCTCGCCGAGCCCAG
TGGCGTGGGCTCGTCACCCCAGCTATACCTAAGGGGGGGCAGCAGTTGGTGGACCGCATGCCTTCGGGCGCGGCTCAACT
GCTTTTTTCTTTTTCTTTTTAAAATTTAAAATCCGAATTTCATATTTAGACCCACATATATATTGTCGCATCACCAGTTT
CATCAATAAATGAGATATCATAACCAATTTGTCGAATTTCATGCGTCGTTACAAGCATCAATTTGTCCATTTGAATGGGA
ACAAGAAACGAGATATTGTTGTCAATTTGGGATTTTGTTTGAAATAATTTTT--TTAGGTTCAGGGCGTTGTGATGGCAT
CCACCACTCTTGAGTATGTTTTTGATGACTGTGTGCATCTTTTGATGAAGAGGTTGGGGTTTCAACCTTCTTTTTTTTAG
AAAAAAGGTTGAGCTCACCAGTCAAACAAGAAATAGCTAATCAATGCTATCTGGATAGCTTTGTCTTGAAGAAGGTTTTG
ACAGTAGAAACTGAAGTTTGAAAGTAGAAATAATCCTCTTTGGACAGCTAAACAATGTTAATTATCTGGACGAAAGCTAG
CTTTGGCTTCAAGTAATTGAAGTTTGGCAGTAGAAGTTACCTGGCA-TTTCCATCGGCTGGCAAA---CTTAAACTATGA
AACCAGTGACTTCTCGGCGAGTTGGATGAGATCAGAGTAGTAGCTGCAGCAAGTAGCCAGCTACCGCAATATGTACTACC
GAAGCCATCCATCACTT-GATCAACCCAAACTCCGACTGCACCAGCCATGTCCGCCGC---GCCCACCATGTCCCCGGTG
ACCACGGCCGACGACGACGAGATCCTGTACGAGTCCATGCCACGCCTCCGCGTCTACAAGAGCCGCGTGGAGCGCTACCT
GGTGGGCTCCGAGTTCGTCGCCGCCTCCACCGACGCCG------CCACCGGGGTCGCCTCCCGCGACACCGCCATCTCCC
CCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTGGACGCCGACGCCGTGG---ACGGCACGCTCCCTGTCCTCGTCTAC
TACCACGGCGGCGGGTTCTGCCTCTTCTCCGCCTTCGACTCCACCTACCACGCCTACCTCAACGCCTTCGCCGCGCGCGC
CAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCCGAGCACCCCGTACCCGCCGCGTACGCGGACTCATGGGAGG
CGCTCGCGTGGGTTTTCTCCCAC---------AGCGCCGGCGCCGG---TGA---CGAGCCGTGGCTCGCCCGCCACGCC
GACCTCTCCCGCCTCT--------ACCTTAGCGGCGACAGCGCCGGCGCCAACATCGCGCACCACATGGCCATGCGGGCG
GGCGCCAGCG---------------------TCCGGGGCCTCGTCCTGGTGCACCCCTACTTCCTGGGGAGCGACGAGGT
GGGCTCAGACGGCCTGGACCCGGCGGCGCGGGAGCGGCTCGGGAGGCTGTGGCGCGTCGCGTGCCCGGCCGCCGCGGGGG
AGGACGACCCGCTCATCAACCCGCTCGCGGACGGCGCGCCGGGGCTCGAGGCCCTGGCGTGCGGGCGCGTCCTCGTGTGC
GTCGCCGGGGTGGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCGGGGCCAGCGGGTGGCCTGGCGAGGT
GGAGATGTGGCAGGCGCCGGGCAAGGGGCACAGGTTCCACCTGCTGGAGCCGGGCTGTGACGAGGCCGCCGAGCAGGACA
AGGTCATCAGCGGCTTCCTCAACCGCTGACTCGCCGGCCACGAGCTCGGCATCGCCGGAAGAG---GAAGAGTCAACTGT
GTAGCTTCATCCCCGCGAAATAAAAATTAAAAACTGTAACTTCACCGTATACTGTGCAAATAATAACTGTAGCTTCGTCG
CGGAAGAAAATCTTGTACGACCGGGTCGTACGCACACGAACGTGAGACCACCCCGAGCGCTTGACATCTGGCAATCCCA-
ACATCCAGCCCAACGTGAGTTGCAGATAAAAACAAAGCCC----------------------------------------
---AACGCACG---------------------------------------------------------------------
----------------------------------------CTCAATTAAAAAGCCCAACGCGCGCTC-------------
--------------------------------------------------------------------------------
AATTAGCTGGTCCGTTTCCTTTACGCCGTCCTCTCAGCTTCTGATGATTCATCTTTCAAAAG----AAACGAACAGACAT
CAGATCTGTTTTCATCCTGTTAGCGACGGGGCGGCAAGATGGCTACGGCCCCAGACGACGGCATCGCAGCACACGGCCAA
GGAACATACATGGCATCGTCTCCTCCAGAACCATGTCCACCCACGGCTCCTCCAGTGAGGTTAAGTTCAGTTCACCAATC
TTGATTAATTCAGTTCGGTTCAGACTGAAAACACATGTGACAACAAGCACGTTCCTTCC-TTCCTGAAGCCTATCTTGAT
TAATTCTATTGCTTACCCTTGCAGCAATTGCCAGTGATTGAGACTAATGGCCAGCCGAGGACGAGCAGCACACCAATGAA
TGATCATGACTTACAAGATGCTGATAAGGCTCCAAGAGTTGGGATGTGTTTTCAGTCTTGAGGAAGAGGCGTGCTAATTT
TACAATTCTTATGCTCAAACCAAGGGATTCAGCATTATAAAGTGCCACTTGAAGTTTAGGGCAGATAAGTCTTTAAGTTC
CAGAGATCGGACTGCGCATTCGCCAATGCTTTCCGCCGACGCCTGTCCAACCGATCCTCGCGGCGCCTTCGCGTGTCCTC
CTCGTGGCGCCTTGCCCAGTAGTTTTGCTCGTAGGCGACGTCCTCCGGGTGGCGCCGGCGCCACTTCGCCATGACCCGCT
CAT
>chr2A_326
TTTTTTTTC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------TTTAAAAATTTAAAATCCGAATTTCAAACTTAGACCC----ATATATTGTCGCATGACCAGTTT
CATCAATAAATGAGATAGCATCACCAATTTGTGGAATTTCATGTGTCGTTACAAGCATCAATTTGTCCACTCAGGTGGGA
ACAGGAAACGAGATATTGTTGTCACTTTGGGATTTTGTTTGAAATATAAAAAAATTCGGTTCGGGGCGTTGTCATGGCGT
CCACCACTCTCGAGTATGTTTTTGATGACTGTGTGCATTTTCAAGCTTTCTTC----------------------TTTAA
AAAACAAGTTGAGCTCACGAGTCAAACAAGAAACAACTAATGAATGCTATCTGGATAGCTTTGGCTTGAAGAAGGTTTTG
ACAGTAGAAACTAAAGTTTGA-----GAAATAATCCTCTTTTAACAGCTAAACAATGTTAATTATCTGGACGAAAGCTAG
CTTTGGCTTCAAGTAATTGAAGTTTGGCCGTAGAAATTACCTGCCATTTTCCATCAGCTGACAAAGTACTTAAAATATGA
GGCCAGTGCCTTCTCGGTGAGTTG-ACGAGATCACAGTAATAGCTGCAGCAAGTAGCCAGCTACCGCA--ATATACTACC
GGAGCCATCCATCACTT-GATCAACCCAAACTCCGACTGCACCAGCCATGTCCGCCGC---GCCTTCCGAGCCCCCGGCG
GCCACGGCTGGCGACGACGAGCTTCTCTACGAGTCCATGCCCCGCCTCCGCGTCTACAGGAGCCGCGTGGAGCGCTACCT
GGTGGGCTCCGAGTTCGTCGCTGCCTCCACCGACGCCG------CCACCGGGGTCGCCTCCCGCGACACCGCCATCTCCC
CCAACGTCTCCGCGCGTCTCTACCTCCCACGCCTGGACGC------GGCCG---ACGCCAGGCTGCCCATCCTCGTCTAC
TACCACGGCGGCGGGTTCTGCCTCTTCTCCGCCTTCGACTCCAACTACCACGCCTACCTCAACGCCTTCGCCGCGCGCGC
CAACGCCATCGTCGTCTCCGTCGAGTACCGCCTCGCGCCCGAGCACCCCGTCCCCGCCGCGTACGCGGACTTGTGGGACG
CGCTCGCCTGGGTCCTTTCCCAGGTCGCCGCGAGCGCCGGCGCCGA---GCC---GGATCCGTGGCTCGCCCGCCACGCC
GACCTCTCCCGCCTCT--------ACCTTAGCGGCGACAGCGCCGGGGCCAACATCGCGCACCACATGGCCATGCGGGCG
GGCGCCAGCG---------------------TCCGCGGCCTCGTCCTGGTGCACCCCTACTTTCTGGGGAGCGACGAGGT
GGGCTCCGACGGCCTGGACCCGGCGATGCGGGAGCGGCTCGGGAGGCTGTGGCGCGTCGCGTGCCCGGCCGCAGCGGGGG
AGGACGACCCGCTCATCAACCCGCTCGCGGACGGCGCGCCGGGGCTCGAGGCCCTGGCGTGCGGGCGCGTCCTCGTGTGC
GTGGCCGAGGCCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCGGGGCCAGCGGGTGGCCTGCCGAGGC
GGAGGTGTGGCAGGCGCCGGGGAAGGGGCACAGGTTCCACCTGCTGGAGCCGGGCTGCGACGAGGCCGCCGCGCAGGACA
GGGCCATCAGCGGCTTCCTCAACCGCTGACTCGCCGGCCACGAGCTCGACATCGCCGGAAGAG---GAAGAGTCAACTGT
GT------------------------------------------------------------------------------
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---
>chr2B_681
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------------------------------------------AATGATATCTGGATAGCTTTGGGTTGAAGAAAAATTTG
ACAGTAGAAACTGAAGTTTGAATGTAGAAATTATC-TCTCTGGACAGCTAAACACTGTTAATTATCTGGACCTAAGCTAG
CTTTGGCTTCAAGTAGTTGAAGTTTGGCAGTAGAAATTGTCTGACA-TTTCCATCAGCTGACAAA---CTTAAATTATGA
AACCAGTAACTTCTCGGCGAGTTG-ATGAGATCACAGTGGTAGTTGCTACTA--------------CAATATATACTACC
GGAGCCATCCATCACTTTGATCAGCCCAAACTCCAACTGCACCAGCCATGTCCGCCGCGCCGCCCACCGTGCCCCCGGCG
GCCACGGCCGCCGACGACGAGATCCTGTACGAGTCCATGCCACGCCTCCGCGTCTACAGGAGCCGCGTGGAGCGCTACCT
GGTCGGCTCCGAGTTCGTCGCCGTCTCCACCGACGCCG------CCACCGGGGTCGCCTCCCGCGACACCGCCATCTCCC
CCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTGGACGCCGCC------G---ACGGCACGCTCCCTGTCCTCGTCTAC
TACCACGGTGGCGGGTTCTGCCTCTTCTCCGCCTTCGACTCCACCTACCACGCCTACCTCAACGCCTTCGCCGCCTACGC
CAACGTGCTCGTCGTCTCCGTCGAGTACCGCCTCGCACCCGAGCACCCCGTCCCCGCCGCGTACGCGGACTCGTGGGACG
CGGTCGCCTGGGTCCTTTCACAGGCCGCCGCCAGCGCCGGCGCCGA---GCC---GGATCCGTGGCTCGCCCGCCACGCC
GACCTCTCCCTCCTCT--------ACCTCAGCGGCGACAGCGCCGGGGCCAACATCGCGCACCACATAGCCATGCGGGCG
GGGGCCAGCG---------------------TCCGCGGCCTCGTCCTGGTACACCCTTACTTCCTGGGGAGCGACGAGGT
GGGCTCAGACGGCCTGGACCCGGCGATGCGGGAGCGGCTCGGGAGGCTGTGGCGCGTCGCGTGCCCGGCCGCAGCGGGAG
AGGACGACCCGCTCATCAACCCGCTCGCGGACGGCGCGCCGGGCCTCGAGGCCCTGGCTTGCGGGCGCGTCCTCGTGTGC
GTCGCCGGGGCGGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCGTGAACAGCGGGTGGCGTGGCCAGGC
GGAGATGTGGCAGGCGCCGGGCAAGGGGCACAGGTTCCACCTGCTGGAGCCGGGCTGCGACGAGGCCGCCGCGCAGGACA
GGGCCATCAGCGGCTTCCTCAACCGCTGACTCGCCGGCCACGAGCTCGACATCGCCGGAAGAGGAAGAAGAGTCAACTGT
GTAGCTTCATCCCCGCAAAATAAAAATAAAAAACTGTAACTTCACCGTATAGTCTGGA---AATAACTGTAGCTTCGTCA
CCGAGGAA------------------------------------------------------------------------
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---
>chr5D_1005
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---------------------------------------------------CCGCCGC---CCCCATCCCGGCCCCGGCG
CCCGCG---GCCGACGACGAGATCGTCTACGAGTCCATGCCCTGCATCCGCATCTACAAGGACCGCGTGGAGCGCTACT-
--TCGGCTCCGAGTTCGTCGCCGCCTCCGCCGACGCCGACGCCGCCACCGGGGTCGCCTCCCGCGACCGCGTCATCTCCC
CCGAGGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACCCCGCCAAGGACT------CCAAGCTCCCCGTCCTCGTCTAC
TACCACGGCGGCGGCTTCTGCCTCGGCTCCGCCTTCAACCCCACCTTCCACGCCTACTTCAACAACCTCGCCGCGCTCGC
CGGCGTGCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCCGAGCACCCCGTCCCCGCCGCCTACGCCGACTCCTCGGACG
CGCTCGCCTGGGTCGTCTCCCACGCCGCCCCCGGCGCCGCCGCCGC---TGGCTTCGAGCCATGGCTCGCCGACCACGCC
GACTTCGCCCGCCTCT--------ACCTCGGCGGCGAGAGCGCCGGCGCCAACATCGCGCACCACGTGGCGATGCGGGTC
GGCGCGGAGGGGCTGCCCCACGGCGCCGCCATCCACGGCCTCCTCATGATCCACCCATACTTCCTCGGCACCGACAAGGT
GGCCTCCGACGACCTCGACCCGGCGGCGCGGGAGAGCCTGGCGAGCCTGTGGCGCGTCATGTGCCCGACCACCACCGGGG
AGGACGACCCGCTCATCAACCCGTTCGTGGACGGCGCGCCGGGCCTGGACGCCCTGGCGTGCGGGCGCGTGCTGGTGTGC
ATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCAGGGCCAGCGGGTGGAGCGGGGAGGC
CGACATTTGGCAGGCGCCGGGGAAGGGCCACACCTTCCACCTCCTCGAGCCCTGCTGCGAAGAGGCCGTCGCCCAGGACA
AGGTCATCGCCGAGTTCCTCAACC--------------------------------------------------------
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---
>chr5B_1005
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---------------------------------------------------CCGCCGC---CCCCATCCCGGCCCCGGCG
CCCGCG---GCCGACGACGAGATCGTCTACGAGTCCATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACT-
--TCGGCTCCGAGTTCGTCGCCGCCTCCGCCGACGCCGACGCCGCCACCGGGGTCGCCTCCCGCGACCGCGTCATCTCCC
CCGAGGTCTCCGCGCGCCTCTATCTCCCCCGCATCGACGCCGCCCAGGCCG---ACGCCAAGCTCCCCGTCCTCGTCTAC
TACCACGGCGGCGGCTTCTGCCTCGGCTCCGCCTTCAACCCCACCTTCCACGCCTACTTCAACAACCTCGCCGCGCTCGC
CGGCGTCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCCGAGCACCCCGTCCCCGCCGCCTACGCCGACTCCTGGGACG
CGCTCGCCTGGGTCGTCTCCCACGCCGCCCCCGGCGCCGCCGCCGCCGCTGGCTTCGAGCCCTGGCTCGCCGACCACGCC
GACTTCGCCCGCCTCT--------ACCTCGGCGGCGAGAGCGCCGGCGCCAACATCGCGCACCACGTGGCGATGCGGGTC
GGCGCGGAGGGGCTGCCCCACGCCGCCGCGATCCACGGCCTCCTCATGATCCACCCCTACTTCCTCGGCACCGACAAGGT
GGCCTCCGACGACCTGGACCCGGCGGCGCGGGAGAGCCTGGCCAGCCTGTGGCGCGTCATGTGCCCGGCCACCACCGGGG
AGGACGACCCGCTCATCAACCCGTTCGTGGAGGGCGCCCCCGGGCTCGATGCCCTGGCGTGCGGCCGCGTGCTGGTGTGC
ATCGGGGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCAGGGCCAGCGGGTGGCGCGGGGAGGC
CGACATTTGGCAGGCGCCGGGGAAGGGGCACACCTTCCACCTCCTCGAGCCCTGCTGCGAAGAGGCCGTCGCCCAGGACA
AGGTCATCGCCGAGTTCCTCAACC--------------------------------------------------------
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---
>chr5A_1039
CGACCG--------------------------------------------------------------------------
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-------------ACGATGAGCTCGTCTACGAGTCCATGCCCTGCATCCGCATCTACAGGAACCGCGTGGAGCGCTACC-
--TCGGCTCCGAGTTCGTCGCCGCTTCCACGGACGCCG------CCACCGGAGTTACCTCCCGCGACCGCACCATCTCCC
CTCAGGTCTACGCGCGCCTCTACCTCCCCCGCCTCGACGCGGC------------CGCCAAGCTCCCCGTCCTCGTCTAC
TACCACGGCGGCGGGTTCTGCCTAGGCTCCGCTTTCAACCCCATGTTCCACGCCTACCTCAACAACTTGGTCGCGCTCGC
CAACGTCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCCGCTGCATATGCCGACTCATGGGAGG
CTCTCACCTGGGCCGTGTCCCACGT------------------------TGA---CGAGCCTTGGCTTGCCGACCACGCC
GACTTCTCCCGCCTCT--------ACCTCGGGGGCGACAGCTCCGGCGCCAACATCGCGCACCACATGGCGATGCGGGTG
GGCGCGGAGGGGCTGGCCCGGGGCGCCAAGATCCACGGCCTCGTCATGATCCACCCCTACTTCCTGGGGAGCAACAAGGT
GGGCTCCGACGACCTGGACCCCACGGCGCGGGAGACCCTAGCGAGCGCATGGCGGATCATGTGCCCGACGACCACGGGGG
AGGACGACCCGCGAATCAACCCGTTGGTCGACGGCGTGCCGGGCCTTGAGGCCCTGGCATCCGGCCGCGTGCTCGTGTGC
ATTGCCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCTTACTACGACCGGCTGAGGGCGAGCGGGTGGAGCGGGGAGAC
GGACATATGGCAGGCGCCGGGAAAGGGGCACACGTTCCACCTCCTTGAGCCGTGCTGCCAAGAGGCCGTCGCGCAGGACA
AGGTCATCGCCGAGTTCCTCAACTGTTGAC--------------------------------------------------
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---
>chr5A_1042
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-----------CGACGACGAGATCGTCTACGAGTCCATGCCCTGCATCCGCATCTACAAGAACCGCGTCGAGCGCTACT-
--TCGGCTCCGAGTTCGTCGCCGCCTCCGCCCACGCCGACGCCGCCACCGGGGTCGCCTCCCGCGACCGCGTCATCTCCC
CCGAGGTCTCCGCGCGCCTCTACCTCCCCCACATCGACCCCGCCAAGCCCGACAACGCCAAGCTCCCCGTCCTCGTCTAC
TACCACGGCGGCGGCTTCTGCCTCGGCTCCGCCTTCAACCCCACCTTCCACGCCTACTTCAACAACCTCGCCGCGCTCGC
CGGCGTCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCCGAGCACCCCGTCCCCGCCGCCTACGCCGACTCCTGGGACG
CGCTCGCCTGGGTCGTCTCCCACGCCGCCCCCG---------CCGCCGCTGGCTTTGAGCCCTGGCTCGCCGACCACGCC
GACTTCGCCCGCCTCT--------ACCTCGGCGGCGAGAGCGCCGGCGCCAACATCGCGCACCACGTGGCGATGCGGGTG
GGCGCGGAGGGGCTGCCCCACGGCGCCGCGATCCACGGCCTCCTCATGATCCACCCCTACTTCCTCGGCACCGATAAGGT
GGCCTCCGACGACCTGGACCCGGCGGCGCGGGAGAGCCTGGCCAGCCTGTGGCGCGTCATGTGCCCGACCACCACCGGGG
AGGACGACCCGCTCATCAACCCGTTCGTGGACGGTGCGCCGGGGCTGGACGCCCTGGCGTGCCGGCGTGTGCTGGTGTGC
ATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCAGGGCGAGCGGGTGGAGCGGGGAGGC
CGACATTTGGCAGGCGCCGGGGAAGGGGCACACCTTCCACCTCCTCGAGCCCTGCTGCGAAGAGGCCGTCGCCCAGGACA
AGGTCATCGCCGAGTTCCTCAAC---------------------------------------------------------
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---
>chr5D_1459
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-------------------------------------------------TGA---CGAGCCTTGGCTTGCCGACCACGCC
GACTTCTCCCGCCTCTACGGCTCTACCTCGGGGGCGATAGCTCCGGCGCCAACATCGCGCACCACATGGCGATGCGGGTG
GGCGCGGAGGGGCTGGCCCAGGGCCCCAAGATCCGTGGCCTCCTCATGATTCACCCATACTTCCTGGGGAGCAACAAGGT
GAACTCCGACGACCTGGACCCGACGGCGCGGGAGAGCCTAGCGAGCGCATGGCGCATCATGTGCCCGACGACCACGGGGG
AGGACGACCCGCGAATCAACCCGTTGGTGGACAGCGCGCCGGGCCTCGAGGCCCTGGCATCTGGCTGCGTGCTCGTGTGC
ATTGCCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCTTACTGCGACCGGCTCACGGCGAGCGGCTAGAGCGGGCAGGC
GGACATATGGCAGGCGCCGGGAAAGGGGCACACGTTCCACCTCCTTGAGCCGTGCTGCCAAGAGGCCGTCGCGCAGGACA
AGGTCATCGCCGAGTTCCTCAACCGTTGACT-------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr2B_2095
--------------------------------------------------------------------------------
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CGGAAGAAAATCTTGTACGACCGGGTCGTACGCACACGAACGTGAGACCACCCCGAGTGCTTGACATCTGGCGATCCCA-
ACATCCAGCCCAACGTGAGTTGCAGATAAAAA-AAAGCCC----------------------------------------
---AACACATG---------------------------------------------------------------------
----------------------------------------CTCAATTAAAAAGCC-AACGCACGCTC-------------
--------------------------------------------------------------------------------
AATTAGCTGGTTCGTTTCCTTTACGCCGTCCTCTCAGCTGCTGATGATTCATCTTCCAAAAG----AAACGAATATACGT
CAGATCTGTTTTCATCCTGTTAGCAACGAGGCGGCAAGATGGCTACGGCCCCAGACGACGGCATCGCAGCACACGGCCAA
GGAACATACATGGCATCGTCTCCTCCAAAACCATGTGCACCCGCGGCTCCTCCAGTGAGGTTAAGTCCAGTTCACCAATC
TTGATTAATTCAGTTCGGTTCAGACTGAAAAAACATGTGACAACAAGCACATTCCTTCCTTTCCTGAAGCCTGTCTTGAT
TAATTCTATTGTTTACCCTTGCAGCAATTGCCAGTGATTGAGACTAATGGCCAGCCGAGGGCGAGCAGCACACTAATGAA
TGATCATGACTTACAAGATGCAGATAAGGCTCCAAGTGTTGGGATATGTTTTCAGTCTA-AGGAAGAGGCGTACCAATTT
TACAATTCTTATGCTCAAACCAAGGGATTCAACATTAGAAAGTGCCACTTGAAGTTTAGGGCAGCTAAGTCTTTAAGTTC
CAGATAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr6D_2095
--------------------------------------------------------------------------------
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CGGAAGAAAATCTTGTACGACCGGGTCGTACGCACACGAACGTGAGACCACCCCGAGCGCTTGACATCTGGCAATCCCA-
ACATCCAGCCCAACGTGAGTTGCAGATAAAAACAAAGCCC----------------------------------------
---AACGCACG---------------------------------------------------------------------
----------------------------------------CTCAATTAAAAAGCCCAACGCGCGCTC-------------
--------------------------------------------------------------------------------
AATTAGCTGGTCCGTTTCCTTTACGCCGTCCTCTCAGCTTCTGATGATTCATCTTTCAAAAG----AAACGAACAGACAT
CAGATCTGTTTTCATCCTGTTAGCGACGGGGCGGCAAGATGGCTACGGCCCCAGACGACGGCATCGCAGCACACGGCCAA
GGAACATACATGGCATCGTCTCCTCCAGAACCATGTCCACCCACGGCTCCTCCAGTGAGGTTAAGTTCAGTTCACCAATC
TTGATTAATTCAGTTCGGTTCAGACTGAAAACACATGTGACAACAAGCACGTTCCTTCC-TTCCTGAAGCCTATCTTGAT
TAATTCTATTGCTTACCCTTGCAGCAATTGCCAGTGATTGAGACTAATGGCCAGCCGAGGACGAGCAGCACACCAATGAA
TGATCATGATTTACAAGATGCTGATAAGGCTCCAAGAGTTGGGATGTGTTTTCAGTCTTGAGGAAGAGGCGTACTAATTT
TACAATTCTTATGCTCAAACCAAGGAATTCAGCATTATAAAGTGCCACTTGAAGTTTAGGGCAGATAAGTCTTTAAGTTC
CAGAGATTGGACTGCGCATTCGCCAATGCCTTCCGCCGACGCCTGTCTAACCAATCCTCGCGGCGCCTTCGCGTGTCCTC
CTCGTGACGCCTTGCCCAGTAGTTTTGCTCGTAGGCGACGTCCTCCGGGTGGCGCCGGCGCCACTTCGCCATGACCCGCT
C--
>chr5B_2095
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CGAAAAAAAATCCGGTACGACCGGGTCGTACGAGCGCATACGTGAGACCACCCCGAGCGCTTGACATCTGGCAATCCCAA
ACATCCAGCCGAACTTGAGTTCCAAAAAAAAAGCCCAAGCGCGCTTAGGCTAGCCATAGTGGGAGTAACTTAGGTAGTAA
CATAACACATCCCAAGAAACAATTGCTTATGTGGCATGGAGTTAATGAGGAAAGAGATACTTATGGTAACATAGTATGTT
AATGTAACATAACACACCCCGAGGCAAAATGAGTCTATATCTCAATTAATGAAGGCTTTCATGTTACCATCCATATGTTA
CTACCCACTATAAAGGTAGTAACATAGACTAGTAACATACATCTTCCGATAAAGTTACTCCCCACTATGACCAGCCTTAG
AATTAGCTGGTCCGTTTC-----CGCCGTCCTCTCAGCTTCTGATGATTCATCTTCAAAAAAGAAAAAACGAACAGACAC
GAGATCTGTTTTCATCCCGTCAACAACGGGGCTGCAAGATGGCGACGGCGCCCGACGACGGCATCGCGGCACAGGGCCAA
GGAGCATACATGTCATCGTCTCCTCCAGAACCCTCTCCACCCATGGCTCCTCCAGTGAGGGTAAGTTCAGTTC-------
--------------------------------ACATGTGACAACAAGCACGCTTCTTCC-TTTCTGAAGCCTATCTTGAT
TGATTCTACTGCTTAACCTTGCAGCAATTGCCGGTGATTGAGACTAATGGCCAGCCAAGGACTAGCAGCACACCAATGAA
TGATCATGGGTTACAAGATGCAGATAAGGCTCCAAGAGTTGGGATGTGCTTTAAGTC-TGAAGAAGAGGCGTACCAATTT
TACAATTCTTATGCTCAAACCAAGGGATTTAGCATTAGAAAGTGCTACTTGAAGTATAGAGCAGATAAGTCTTTAAGTTC
CAGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>SNPs
-----SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS---S----------------------S-S--------SSSS--------------S--------
-----------------S---S----------S----------S-------------------------S-SSSS-----
---S--------------------S---------------------SSSSSS----S-----S---------S-----S-
----------S---------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S
----S-S-----------S--------------S-S-----S---------------------S----------------
----------------------S---------------------------------------------------------
-----------------------------------S-------S-----------S----S-------------S-----
------------------------S---------S-------------------------------------S-------
-S------------------------------------------------------------------S--S------S-
S---------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-SSS-SS------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-------S-----SS------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------------------------------------------------------------S
---------------------------------------------------------S-------------S--------
------------------------------------------------S-------------------------------
----------------S----------S-----------------------S-S--S-SSS------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
-------S---------------------S-----------------S----S---------------------------
------S-------------------------------------------------------------------------
-SS
>forward_268
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GCTCGTCACCCCAGCTATAC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_1992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGCAGGACA
AGGTCATCAGC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>forward_270
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCGTCACCCCAGCTATACCT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_2049
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCATCGCCGGAAGAGGAAG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
