>input_sequence_64279
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-------ATGCACAAGTTCAAGACCTTGGCCAAGGCCCTGACCGGCAAGACCGTCACCGCCGGGAGGAACTCTTCCGGGC
GGATCACTTCTTTTCACCGAGGGGGTGGATCCAAGCGATCGCTTAGGGACATTGACCTCAAAAGGAACACTTGCTCCGTT
GGCATTGTGGAAAGGATTGAGTACGACCCTAACCGCTCTTCTCGGATCGCTCTTCTCCGATGGATTGAAGGGGTGCCTCA
AAAGGATGCAGCATACAAGGCCGAGCGTGCGCCTGTCAATTACATCATAGCCAGCCATCAAATGGAACCGGGCAGCATGG
TGGTGAACAGCGACTCCTCCAAACCTTCCACGACCGGCTCCTTGATGCGGCCTGCCCACAATGCTGATTCTTTCCTTCGG
TTCCAAGAGCTGTTCCGCAAGGCCAGCCAAGAAGCCGAAGAGGAGGGCGCTGATGATCAAGCAGCAAAGGATGCGGCGGT
CACCACAGCAGCGCCGCTCATGCCTGCCGACCTACTGGACCTCAATTCCAAGGTGGGAAACTGCATGCCGTTGTCTGACA
TCCGCATGGGCACATGGGTGCACAGCATCGAGCTGCGTCATGGCCAGGGGGCGAAGCTCGTGCGGGCCGCCGGAGCCTAC
GCCAAGGTGGTCAAGGAGTCGGCCATGCAGTGCCTTGTGCGGCTGCCGTCGGGCGTCGAGAAGCTGATAGACTCGCGGTG
CCGGGCCACCATCGGCGTCGTCTCCAATGCCACCCATGGCGCGCGGAAGCTGAGGAAGGCGGGGCATAGCCGGTGGCTGG
GCAGGCGCCCGGTCGTCCGTGGTGTCGCAATGAACCCGGTGGACCATCCCCATGGAGGAGGCGAGGGGCGCACCAAGGGT
GGCAGGCCCTCGGTGTCGCCCTGGGGGAAGCCCACCAAGGCTGGGTATCGGACCGTGCCCAAGAAGCCAAAGGCTCAGCT
GTCCCGTGATTGA-------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G038000
CCCTTTTGCAAACACTTAAAATTTTTGTCAATATTTCGGTGGGTTTTTTTAACATACGAATGGAAATTTCGGTGGATTTT
TTTTTTGAGAAGAAGAAATTTCGGTGGTAGACGGGCCAGAACGAGAGATGAAGAAAGAGTTG------------GCCGAA
GCCGAAGCCCATCTAGCATAGAACGAGGAGGCCCAGCCCACCACACGCACGCGTACACAGTCGCACTCGTCGCACCAC--
-------GCGCCTGCTTTCTCTCCTCCTCCTCCTCCTCCTCCCCCCCGCGCCGCCGCCGCCGCCGCCGTCGCCGTCGCCC
CCGCTCCGATCCCTCCGTCCGGCAGCCAGGTACCTCCTCCTCTCCTCTT------------------TTCTCCCTCCCCA
T----CCTCCCGCGCCACCGACGGCCGCGCGCGCG----------------GATGCGCATTCCGCGGATCTTGCTTGTTT
TATCTATCCATCCAGTTCGGCTGGCCTAGATCGTGGAGGGAAACCCTAGGCAGGTGTTAATGGAGGCCGATTGGCTGCCC
TGGATCCACCTTGTTGACGGGTGTGATGGATCCGGATTGGTTCTCTGGACTCAT--------------------------
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-----------------------------------------------------------ATTGAAGCAATTTAAATGTTT
TGCCTGCTGAATTC--AGCAATTGTTAATCTAGTGTTTCTCTTCCTGACAATCTGAACGTTGCTGAATAACAAGAATTTA
AAGTTTGGAGCTTCTCTTTTAAATCTTGCCGCCAATCTTATTGGTTTGGGCCATAATCGAATCCAGTACTAGCTCGTGTC
CTGGTTCGGGTTCGAACCTAAGCTGCTTGATCTTTTGCTCTGGATCTGTGCGAATAACATGACCATGGTGTTTCTTTT-A
ATCAGTAAA-CCTAG-------------GTGGTCTTAAGATCGATAGAAATTGTATCTCGCTACTTTCTGTTGATTCTTT
GTGGTTAGTTCGTTCATCCTTTAGGGC-------CTTGATTTATGGAAGCCTATCTACTTGCTG----------------
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------------GCTGCTAATACATGCTGTT--------AGTCCTCGAAGCTTACTGTCTCTTTGGCGATTCTTAC---G
CCTGCAGATGCACAAGTTCAAGACCTTGGCCAAGGCCCTGACCGGCAAGACCGTCACCGCCGGGAGGAACTCTTCCGGGC
GGATCACTTCTTTTCACCGAGGGGGTGGATCCAAGCGATCGCTTAGGGACATTGACCTCAAAAGGAACACTTGCTCCGTT
GGCATTGTGGAAAGGATTGAGTACGACCCTAACCGCTCTTCTCGGATCGCTCTTCTCCGATGGATTGAAGGGGTGCCTCA
AAAGGATGCAGCATACAAGGCCGAGCGTGCGCCTGTCAATTACATCATAGCCAGCCATCAAATGGAACCGGGCAGCATGG
TGGTGAACAGCGACTCCTCCAAACCTTCCACGACCGGCTCCTTGATGCGGCCTGCCCACAATGCTGATTCTTTCCTTCGG
TTCCAAGAGCTGTTCCGCAAGGCCAGCCAAGAAGCCGAAGAGGAGGGCGCTGATGATCAAGCAGCAAAGGATGCGGCGGT
CACCACAGCAGCGCCGCTCATGCCTGCCGACCTACTGGACCTCAATTCCAAGGTGGGAAACTGCATGCCGTTGTCTGACA
TCCGCATGGGCACATGGGTGCACAGCATCGAGCTGCGTCATGGCCAGGGGGCGAAGCTCGTGCGGGCCGCCGGAGCCTAC
GCCAAGGTGGTCAAGGAGTCGGCCATGCAGTGCCTTGTGCGGCTGCCGTCGGGCGTCGAGAAGCTGATAGACTCGCGGTG
CCGGGCCACCATCGGCGTCGTCTCCAATGCCACCCATGGCGCGCGGAAGCTGAGGAAGGCGGGGCATAGCCGGTGGCTGG
GCAGGCGCCCGGTCGTCCGTGGTGTCGCAATGAACCCGGTGGACCATCCCCATGGAGGAGGCGAGGGGCGCACCAAGGGT
GGCAGGCCCTCGGTGTCGCCCTGGGGGAAGCCCACCAAGGCTGGGTATCGGACCGTGCCCAAGAAGCCAAAGGCTCAGCT
GTCCCGTGATTGATTGATGATCTTCATGGAAGCCGTCTGTTGCTGCTCCAAGGGAAAGGTAGCAACCAGGATCTTGATGT
GGCTATGGATCACAAAGCTAAGGATTGTAGTAACTCATGCTTGTTTTTTGTT----TTGCAAACGGTTTCTGTTGCGGCA
CTTTCGCTTTATTAT---GTACTACTAATAATAATAACAAGTGATGTTTGGACTTGCCTCTGCCCAGTTTGCTGCATTCC
TTCCTGCCATTAATAATTTGTTTATTGAGT--ATGTTGCTTGTGATTGAGAATTTGCTCTTGTCTGGGGTAAGCAATCTG
GGGGC-------ATGATGATGTGCACATATATACATACATGTTTCTAGTTTCTGTAGCTGCTTTTCCGTCG----AAAAC
ACGCATGTGCTGAGCTGCATATATATATACATAGTTTTTTCAGTGTAT------------------CTGAGCCTAATTTC
TGTTGGTGTAAATCCATCAT---GTTGACAGCTAGCATGATTGATTAATATGCCATTCATACATAGA-CATAGGGCCTAG
ATCGATACTGCAATGCCTCTGGAGTTGATCCTGGTGGTTTTGCTATTCAGTGCACACTTTGCAGCAATTCCTGCCAAGTT
TTGTTTGCTCCAGG------------------------------------------------------------------
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---------------------------------------------------------AGACATTTGCTCAAGATTAACTG
ACCGAGCTAGAAAGAGAGACCAGAGATGTATGGGTCTGTCATTGTGCATTGCATGGTCCTAATTTTGCCAGCCACAACCC
ACAACACAAATCTAGGGTGGGGGCGAAAAATCCCATCTAAACTTATCAAGATGGGAATCTAGTTCCTAACATCTTGATGG
GGAAGAAGGCAACGGTGTTAATGATTCGCAATTTGGATGCGTGGTTCGAGACATTTCATTTTTCGAAAACCGAATCCAAA
AAGTTAAACACGTGCGGGCGGCTCTCCCGCAAGGAAAAGAAAACCTCTAATGGAGACAACTGGTGCACATGGCTCATGCA
ATTTATTCACGAGTAGCTTTTGTAGTAACTTTTGCAAAAGGCATCCTTTTTTTAGAGA
>chr1D_98
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-----------------ATTTCGGCAGTAGACGGGCCAGAACGAGAGAGGGAGAAAGAAAGAGGTCGGGACGCCGCCGAA
GCCGAAGCCCA-CTACCATAGAACGAGGAGGCCCAGCCCACCACACGAC-----ACACAGTCGCACTCGCACCACGGGGC
TTCCCTTGCGCCTGCTTT-----CTCCTCCTCCTGCTCCTACTCCTCGCGCCGCCGCCGCTGC-----------------
----TCCGATCCCTCCGTCCGGCAGCCAGGTACCTCCTCCTCTCCTCCCCTCCGCTCCGCTCTTGTCTTCTCCCTCCCCG
CGCCACCTCCCGGGCCACCGACGGCCGCACGCAAGCGCGCGCGCGCTACCAGATGCGCATTCTGCCCTCTACCACGCCCT
CAAGATACCAGGCGCGTATGCTTGATTTTGAGGGGGT-------------------------------------CTGCCC
TGGATCCACGTTGTTGAGGGGTGTGATGGATCCGGAAAGCCGACGGCGTCCTGGGCTTCTTGTCCTGTCTGTTACAAGTC
TCCAGCAAAACAAAGCAGAAGAAATTAAGCGAATTGCCAGCTTGTCTGTGACCTGTGAGCTCAGATTTTGCTATACAACT
CATTTTATTTGCTGTCATGAATGAACCAACTCCTCCTTTAGAACCTTATATTATTTCTACTCCGAGCTCCCTGTGTGATG
TGTGAACTCGGTTATGTCAATGTTGTTCAACTCATTTTATTCTTGTCAATCTTATGTGTGTGCTTTGGAACGTAGCAATG
AAGTAGTCTAGGTGTCTTTTTGTTTGAGAACATACATAGCAAGGAACCAACTTGGGGGGTGATCAACAAATCTCCTGGTC
ATGTCTTTGGTGTCGACCTGTTCGTAGCTGTAGCGTTGCTGAGTTTTTTTTTCCTCTTCTTTTTCTCTTGTGAAAACCTG
GTGGAACAATTAACCCCTGACCTAACCCTTTGTGCTTGACCTAATGCTGCCCAGCTCGAATTCCACAAGTAAATGGTTTT
CTTTTCTTCTAGTCTTACTTTACTAGATATCCAGTTTCTCTACTTCTGCTTAGCTCTTAATTGTAGGGAGTTAAATGTTT
TCTCTAGTGTAATTTGGGCAATTATATTG-TAGTGTTCCTCGTCCTGCCAATCTGTATGTTGCTGAATAAGAAAACTAG-
AAGTTTGTAACTTCTCTTATGAATTTTGCCGCCAATCTTATTGGTTTGGGCCATAATCGAATTTAGTACTAGCTTGTGTC
TA-GTTTGGATTCAAACCTAAGCTGCTTGATCTTTTGCTCTGGATCAGATGGAGTAACATGATCATGATGTCTCTTTTTC
ATCAGCAAAGGCTAGGTGTTCGTCACCTGTGGTCTTAAGATCGATAGAAATGTATG-TCGCTCTGTTTTGTTGATTCTTT
GTGGTTAGTTGGTTCGTCCTTTAGGGCTTGATGACTTGATCTATGGAAGCTTATCTACGTGCTGCTAATACTTCCCTTAG
GGCTTTATTCAGTTATATGTCACGATGCAAATAAGCTATGCTATGAGAAAAGAAACTGCATCACGTGTCTCTGAAATGCT
TCCACCATTAGCTAGCGATGCATTTAGGTTTCCGTTTCGAAGTTGAGAAAATCAAGCTGGGCCTCGCTTGCTGCATTTTG
CGTTGAAAAGCTCACCCAACACATGGCCCAAGCGAAGCTCTGAAACAGTGTGTTCTCATTTCCATGCGGTTTAGCTTGAT
TTTTTCTTTCTCCGGACCCGCCTAGCACCCTGAAATTGCTCACAAGAATTTGTGCAGACCTTGAGAGGCAGCTGATTGTT
CGGGTTCGATACTCGAATTCTTGTTAGAGTTTTTTTGTATAGCTGAAAATCATCTCAGTAGGTTCTAAACAATATTTGTT
TCAGCCGGAAAGGCTACTTGCTAGTAAATTTGTATTTTATATCTGAATTGCTGCAAATGGGTGTGAAATTGTATTGACGC
CAGGGGTAATCAGGCTGGAGAAAGATACAAACACTGCATGCTTTAATCTCTATATTTCCAAACTGTCCCTGTAATGCCCA
GGTCGAAATTGCACATAGACTGTATTGTGAAGTGGTGCCTTTGTAACATAGTACTAAAGAAATATAAGAGCGTTTAGATC
ACTAAGTAGTGATCTAAACGCTCTTATATTTCACATCTGTGTCCTCCGTTTAATTTGATACCATCATGTATTGGGGATGT
TTTGATGTCTACCTGTTCATAGCTGTATTTTTTTCCCTTTTCTTTTTCTTACTTATGAAAACCTGCTGGAGTCATTAACC
CCTCACCAAACCTTCTGTGCTTGAAAAATTGATGCTGCCCAGGCCAAATTCCGCATGTAAA-TGAGTTTCTTTTCTTTTA
T-TCTTACTTCACTTGATATCCAATTTCTGTACTTCTGCTTAGTTCTTAATTGTACCCGAGCTTTTCTGTTGAGACTGAA
TTATGATAAGTTCTCTGGACTCAGATTGAAGGGAGCTAAA----TGTTTTTTCTACTCAATTGGGCAATTATATTGTAGT
GTT---TCTCTTCCTGCTAATCCGAGTTTTGCTGAATAAGAAAAATAATAGTTTGGAACTTGTCTTGTGAATTTTGCTGC
CAGTCTGAGTGGTTTGGGCCATAATCGAATTTAGTACTAGCTTGTGCCTGGTTTGGATTT--------------------
--------------------------------------------------AAACGTAAGCTGCTTGATCTTTTGCTCTGG
ATCAGATGGAATAACGTGATCACAATGTTTCCTTTTGATCACTATAAAGCTAGGTGTTTGTCACCTGTGGTCTTAAGATC
GATATAAATGTATGTCGCCACTTTCTGTTG---ATTCTTTGTGGTTAGTTCGTTCATCCTTTTAG--------------G
GCTTATCTACTTGCTGCTAATACATGCTGTTTTATCTCTAGTCCTTGAAGCTTACCATCTCTTTGGCTATTCTTAT----
-CTGCAGATGCAGAAGTTCAAGACCTTGGCCAAGGCCTTGACCGGCAAGACCGTCACCGCCGGGAGGAACTCTTCTGGGC
GAATCACTTCTTTTCACCGAGGGGGTGGATCCAAGCGATCGCTTAGGGACATTGACCTCAAAAGGAACACTTGCTCGGTT
GGCATTGTGGAAAGGATTGAGTATGACCCTAACCGTTCTTCTCGGATCGCTCTTCTCCGATGGATCGAAGGGGTACCACA
GAAGGATCCAGCATACAAGGCCGAGCGTGCACCTGTCAATTACATAATAGCCAGCCATCAAATGGAACCGGGCAGCATGG
TGGTGAACAGCGACTCCTCCAAACCCTCCACGACCGGCTCCTTGATGCGGCCTGCCCACAATGCCAATTCCATCCTTCGG
TTCCAAGAGCTGTTCCGCAAAGCCAGCCAAGAAGGCGAA---GAGGGCACTGATGATCAAG---CAAAGGATGCGGCGGT
TCCTGCAGCAGCACCGCTCATGCCAGCCGATCTACTGGACCTCAATTCCAAGGTGGGAAACTGCATGCCGTTGTCCGACA
TCCGCATGGGAACATGGGTGCACAGCATCGAACTGCGTCATGGCCAGGGGGCGAAGCTCGTCCGGGCCGCTGGAGCCTAC
GCCAAGGTGGTCAAGGAGTCGGCCACGCAGTGCCTTGTGCGGCTGCCGTCGGGCGTCGAGAAGCTGATCGACTCCCGGTG
CCGAGCCACCATCGGCATCGTCTCCAACCCCACCCATGGTGCACGGAAGCTGAGGAAGGCGGGGCACAGCCGGTGGCTGG
GCAGGCGCCCGGTTGTCCGTGGTGTCGCGATGAACCCGGTGGATCATCCCCATGGAGGAGGCGAGGGGCGCACCAAGGGC
GGCAGGCCGTCGGTGTCGCCCTGGGGGAAGCCCACCAAGGCTGGGTATCGGACCGTGCCGAAGAAGCCAAAGGCTCAGCT
GTCCCGGGACTGACGG----TCTTCATGGAAGCAG---CTTGTTGCTCCGAGGGAAAGGTACCGC-----ATCTTTATGT
GGCTATGGATGACAAAGCTGAGGATTA-------TCATGCTTGTTTTTTT-GTTTTGCAAAAACGGTTTCCGCCGCAGCA
CTTTGACTTTATTATTATG------TATTAATAATAACAGGTGATGTTTGGACCTGCCTGCGCCCAGTT---TGCATTCC
TTCCTGGCATTTTGACATTAACTTGTTTAGGCATGTTCCTTGTGATTGATAATTTGCTCTGTCT--GGTTAATCTAACTG
GGAGGGAACAAAATGATGATGTGCATATATTTAG--------TTCCAGTTTCTGTAGCTGCTGTTCGGCCAT-CACAAGC
ATGCATGGGATGAGCTGCATACATATACAG-TAGTTTATTCAGTTTAT------------------C-------------
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>chr1B_541
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---------------------------------------GTTCTCTGGACTCTG--------------------------
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-----------------------------------------------------------ATTCAGGGGAGTTAAATGTTT
TTGCTAGTGGACCGGGCAATTCTATATTG-TAGTGTTTCTCTTCCTGCCAATCTGAATGTTGCTGAATAAGAAACA--TA
AAAGTTTGAACTTCTCTTATGAATTTCGCCGCCAATCTGAGTGGT--GGGCAATATTCAAATTTAGCACTAGCTTGTGTT
CTGGTTTGGATTCAAACCTAAGCTGCTTGATCTTTTGCTCTGGATCAGATGGAATGGCTTGGTCTCGATGTTTCTTTTTC
ATCAGTAAA-GCTAGGTGTTGGTCACCTGTGGTCTTAAGATCGATAGAAATATTTG-TCACTACTTTCTGTTGATTCTTC
ATGGTTAGTTCGTTCATCCTTTAGATA----------GATGCATGGAAGCTTATCCACTTGCTGCTAATAAATGCTTACG
TGCGCTGCCGGATGTGTACCAGATGCGCGTGTTTGGTTTTGCTGCTTATCTCACACGACAAACAGGGTGTAGCGTCGCTC
GAGTGA--------------------------------------------------------------------------
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-TTTTGTTTCTCAGGAGAAACCC---------------------------------------------------------
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----------------------------------------------------------------GCTGGAGCTATTGATC
CCTCACCAAACCCGTTGTGCTTG---AATCGATGCTGCCCAGGCCGAATTCCGCCTGTAAAATGTGTTTCTTTTCTTCTA
AGTCTTACTTCAGTCGACACCCAGTTCCTGTAGATCTGCTTAGTTCTTAGCTGCACCTCGGCTTCCGTGCTGGGACTGAA
TTGAGATAAGTTCTTTGGACTCAGATTCGGAGAGAGCTAAACGTTGTTTCGTCTAGTGAATTGGGCAACTGTATTGTACT
AGCGCGTCTCTTCCTGCCAATCTGAATGCTGTTGAATAAGAAAAATAAAAGTCTGGAACCGATCTTGTGAATCTTACTGC
CAATCTGATTATCTGAATGTTGCTGGATAAGAAACATACAAGTTTGGAACTTCTCTCTCTTGTGAGTTTTGCTGCCAAAC
TGAAGAATGTTGCTGAATAAGAAACGTACAAGTTTGGGACTTCTCTTATGAAACACAAGCTGCTTCATCTTTTGCTCTGG
ACCAGATGGAATAACATGATCACGATGTTTCTTTTTAATCAG--TAAACCTAGGTGTTCGTCACTTGTGGTCTTAAGATC
GATAGAAATGTATGTCGCTATTTTCTGTTGTTGATTCTTTCTGGCCAGTTCATTCATCATTTAGGGCTTGATATATGGAG
GCTTGTCTACTTGCTGCTAATACATGCTGTTTTATCTCTAGTCCTTGAAGCTTACGGTCTCTTTGGCAATTCTTATTATG
CCTGCAGATGCAGAAGTTCAAGACCTTGGCCAAAGCCTTGACCGGCAAGACCTTCACCGCCGGGAGGAACTCTTCCGGGC
GGATCACTTCTTTTCACCAAGGGGGTGGATCCAAGCGATCGCTTAGGGACATTGACCTCAAAAGGAACACTTGTTCTGTT
GGCGTTGTGGAAAGGATTGAGTACGACCCTAATCGTTCTTCTCGGATCGCTCTTCTCCGATGGATCGAAGGGGTACCTCA
AAAGGATGCATCATACAAGGCCGAGCGTGCGCCTGTCAATTACATAATAGTCAGCCATCAAATGGAGCCGGGCAGCATGG
TGGTGAACAGCGACTCCTCCAAACCTTCCACGACCGGCTCCTTGATGCGGCCTGCCCACAACGCTGATTCCTTCCTGCGG
TTCCAAGAGCTGTTCCGCAA------------------------------------------------------------
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>chr7A_541
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---------------------------------------GTTCTCTGGACTCAG--------------------------
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-----------------------------------------------------------ATTGAAGGGAGCTAAATGTTT
TGTCTACCGAATTC--GGCAATTATATTG-TAGTGTTCCTCTTCCTGCCAATCTGAATGTTGCTGAATAAGAAAAACA-A
AAGTTTGGAACTTCTCTTATGAATTTTGCTGCCAGTCTGAGTGGTTTGGGCCATAAACAAATTTAGTACTAGCTTGTG-T
CTGGTTTGGATTCAAACCTAAGCTGCTTGATCTTTTGCTCTGGATCAGATGGAATGACTTGATCTCGATGTTTCTTTTTC
ATCAGTAAA-GCTAGGTGTTTGTCACCTGTGGTCTTAAGATCGATAGAAATGTATG-TCGTCACTTTCTGTTGATTCTTC
ATGGTTAGTTCGTTCATCCTTT----A----------GATGCATGGAAGCTTATCCACTTGCTGCTAC------------
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--------------------TACATGCTGTTTTATGTCTATTTCTTGAAGCTTATGGTG---------ATTTTTAT----
-CTGCAGATGCAGAAGTTCAAGACCTTGGCCAAGGCCTTGACCGGCAAGACCGTCACCGCTGGGAGGAACTCTTCTGGGC
GAATCACTTCTTTTCACCGAGGGGGTGGATCCAAGCGATCTCTTAGGGACATTGACCTCAAAAGGAACACTTGTTCTGTT
GGCATTGTGGAAAGGATTGAGTATGACCCTAATCGTTCTTCTCGGATCGCTCTTCTCCGATGGATTGAAGGGGTACCTCA
GAAGGATCCAGCATACAAGGCCGAGCGTGCACCTGTCAATTACATAATAGCCAGCCATCAAATGGAACCGGGCAGCATGG
TGGTGAATAGCGATTCCTCCAAACCCTCCACGACCGGCTCCTTGATGCGACCTGCCCACAATGCTGATTCCTTCCTGCGG
TTCCAAGAGCTGTTCCGCAAGGCCAGCCAAG---GCGAA---GAGGGCACTGATGATCAAG---TGAAGGATGCGGCGGT
TCCTACAGCAGCACCGCTCATGCCAGCCGATCTACTGGACCTCAATTCCAAGGTGGGAAACTGCATGCCGTTGTCTGACA
TCCGTATGGGAACATGGGTGCACAGCATCGAACTGCGTCACGGCCAGGGGGCGAAGCTCGTCCGAGCCGCTGGAGCCTAC
GCCAAGGTGGTCAAGGAGTCAGCCACGCAGTGCCTTGTGCGTCTGCCGTCGGGCGTCGAGAAGCTGATAGACTCCCGCTG
CCGGGCCACCATCGGCATCGTCTCCAACCCCACCCATGGCGCGCGGAAGCTGAGGAAGGCGGGGCACAGCCGGTGGCTGG
GCAGGCGCCCGGTCGTCCGTGGTGTCGCGATGAACCCGGTGGACCATCCCCATGGAGGAGGCGAGGGGCGCACCAAGGGC
GGCAGGCCCTCGGTGTCGCCCTGGGGGAAGCCCACCAAGGCTGGGTATCGGACCGTGCCGAAGAAGCCAAAGGCTCAGCT
GTCCCGTGATTGATTGATGATCTTCATGGACGCGG---CTTGTTGCTCCAAGGGAAAGGTAGCAAGCAGGATCTTGATGT
GGCTATGGATCGATCACAAAGGACTATGACTCGTTTTTTCC--CTTTTTG-T----TTGCGAGCAGTTTCCGCTGCAGCA
CTTTGACTTTATTAT---G------TATTAATAATAACAGGTGATGTTTGGACCTGCCTGCGCCCAGTTTACTGCATTCC
TTCCTGGCATTTTGACATTAACTTGTTTAGGCATGTTTCTTGTGATTGATAATTTGCTTTGTCT--GGTTTAGCAAGCTG
GGAGGGAACAAAATGATGTTGTGCGTATATTTAGACAT---------GCTTCTGTAGCTGCTGTTCCGTCAT-AAAAAGC
ATGCATGCGACGAGCTGCATATATATA------GTTTATTCAGTTTATCTGAATTAGCTGATTCAGATCAGTGTAATTTC
TGTCGGTGTAAATCCATCATTATATTGAAAGTTAGCATGATTGATTGATTTGCCATTCATAC------------------
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>chr1B_754
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-------------------AAGCTGCTTCATCTTTTGCTCTGGATCAGATGGAATAACATGATCACGATGTTTCTTTTTA
ATCACTAAA-CCTAGGTGTTCGTCACTTGTGGCCTTAAGATCGATAGAAATGTATG-TCGCTATTTTCTGTTGATTCTTT
CTGATCAGTTCATTCATCATTT----A-----------------------------------------------------
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---------------------------------------------------------------GGGCTTGATGTATGGAG
GCTTGTCTACTTGCTGCTAATACATGCTGTTTTATCTCTAGTCCTTGAAGCTTACCATCTCTTTGGTGGTTCTTAT----
-CTGCAGATGCAGAAGTTCAAGACCTTGGCCAAGGCCTTGACCGGCAAGACCGTCACCGCCGGGAGGAACTCTTCCGGGC
GGATCACTTCTTTTCACCGAGGGGGTGGATCCAAACAATCGCTTAGGGACGTTGACCTCAAAAGGAACACTTGCTCGGTT
GGCGTTGTGGAAAGGATTGAGTATGACCCTAATCGTTCTTCTCGGATCGCTCTTCTGCGATGGATTGAAGGGGTGCCTCA
GAAGGATGCAGCATACAAGGCCGAGCGTGCGCCTGTCAATTACATAATAGCCAGCCACCAAATGGAGCCGGGCAGCATGG
TGGTGAACAGCGACTCCTCCAAACCCTCCACGACCGGCTCCTTGATGCGGCCTGCCCACAACGCCGATTCCTTCCTTCGG
TTCCAAGAGCTGTTCCGCAAGGCCAGCCAAGAAGGCGAAGAGGAGGGCGCTGATGATCAAGCAGCAAAGGATGCGGCGGT
CACCACAGCAGCGCCGCTCATGCCTGCCGACCTACTGGACCTCAATTCCAAGGTGGGAAACTGCATGCCGTTGTCCGACA
TCCGCATGGGCACATGGGTGCACAGCATCGAGCTGCGTCACGGCCAAGGGGCAAAGCTCGTGCGAGCCGCCGGAGCCTAC
GCCAAGGTGGTCAAGGAGTCGGCCACGCAGTGCCTTGTGCGGCTGCCGTCGGGCGTCGAGAAGGTGATCGACTCCCGGTG
CCGTGCCACCATCGGTATCGTCTCCAACCCCACCCATGGCGCGCGGAAGCTGAGGAAGGCGGGGCACAGCCGGTGGCTGG
GCAGGCGCCCGACTGTCCGTGGTGTCGCCATGAACCCGGTGGACCATCCCCATGGAGGAGGCGAGGGGCGCACCAAGGGT
GGCAGGCCCTCGGTGTCGCCCTGGGGGAAGCCCACCAAGGCTGGGTATCGGACCGTGCCGAAGAAGCCGAAGGCTCAGCT
GTCCCGTGATTGATTGATGATCTTCATGGAAGCGG---GTTGTTGCTCCAAGGGAAAGGTACCA-----GATCTTGATGT
GGCTATGGATCACAAAGCTGAGGATTGTAGTAACTCATGCTTGTTTTTTT-GTTTTGCTAAAACGGTTTCTGTTACAGCA
CTTTGGCTTTATTAT---G------TATTAATAATAACAAGCGATGTTTGGACTTGCCTCTGCCAAGTTTGCTGCATTCC
TTCCTGCCACTAATAATTTGTGTATTGAGT--ATGTTGCTTGTGATTGATAATTTGCTCTGTCT--GGTTAAGCAATCTG
GGGGC-------ATGATGATGTGCACATATATACATACATGTTTCTAGTTTCTGTAGCTGCTTTTCCGTCG----AAAAC
ACGCATGTGCTGAGCCGCATATATATA------GTTTTTTCAGTGTAT------------------ATGAGTGTGATTTC
TGTTGGTGTAAATCCATT---ATGTTGACAGCTAGCATGATTGATTAATATGCCATTCATACATAGAACATAGGGCCTAC
AT----ACTGCAATGACTCTGGAGTTGATCCTGGTGGTTTTGCTATTCAGTACACACCTTGCAGCAATTCCTGCCAAGTT
TTGTTTGCTTCAGGAGATGATGATTCATTCCAGTCTTTTTTGCACAGTTGCCTGAGGTCATTTTGGCTTTGTTTGTTACG
CGTACGTACATCTTTGTTGCCTGTTTTAGATATACTCCCTCCGTTCCTAAATATTTGTCTTTCTAGAGATTTCAACAAGT
GACTACATACGAAGCAAAATGAGTGAATCTACACTTCAAAATATGTCTACATACATCCATATGTTGTGTCCATTTAAAAT
GTCTAGAAAGACAAATATTTAGGAACGGAGGGAGTAGATAGTAACTTACGAAATCAAGTGCTCACCGACGGACCAGATGT
CGTTGGCCTTGCCATGTTTCATCTGGTTTAAGATTGGCTGCTGAGGCCAGTGAGGACAGACATTTGCTCAAGATTAACTG
ACCGAGCTAGAAAGAGA--CCAGAGATGTATGAGTCTGTCATTGTGCATTGCATGGCCCTAA-TTTGCCAGCCACAACCC
ACAACACAAATCTAGGGTGGGGGCGAAAAATCCCATCTAAACTTATCAAGATGGGAATCTAGTTCCTAACATCTTGCTGG
GGAAGAAGACAACGGTGAAAATGATTCGCAATTTGGATGCGAGGTTCGAGACATTTCATTTTTA-AAAACCGAATTCAAA
AAGTTAAACACGTGCGGGCGGCTCTCCCGCAAG--AAAAAAACCCTCTAATGGAGACAACTGGTGCACATG---------
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>chr1B_1405
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-----------GTTACACAAAGCCAGCCAAGAAGGCGAAGAGGAGGGCACTGATGATCAAG---CAAATGATGCGGCGGT
TCCTATGGCAGCACCGCTCATGCCTGCCGACCTACTGGACCTCAATTCCAAGGTGGGAAACTGCATGCCGTTGTCTGACA
TCCGCATGGGAACATGGGTGCACAGCATCGAGCTGCGCCACGGCCAGGGTGCGAAGCTCGTGCGGGCCGCCGGAGCCTAC
GCCAAGGTGGTCAAGGAGTCGGCCACGCAGTGCCTTGTGCGGCTGCCGTCGGGCGTCGAGAAGCTGATCGACTCCCGCTG
CCGGGCCACCATCGGCATCGTCTCCAACCCCACCCACGGCGCGCGGAAGCTGAGGAAGGCGGGGCACAGCCGGTGGCTGG
GCAGGCGCCCGGTCGTCCGTGGTGTCGCGATGAACCCGGTGGACCATCCCCATGAAGGAGGCGAGGGGCGCACCAAGGGC
GGCAGGCCCTCGGTGTCGCCCTGGGGGAAGCCCACCAAGGCTGGGTACCGGACCGTGCCCAAGAAGCCAAAAGCTCAGTT
GTCCCGTGATTGATTGATGATCTTCATGGAAGCCGTCAGTTGCTGCTCCAAGGC-AAGGTAGTAGGCAGGATCTTGATGT
GGCTATGGGTCGATCACAAAGGACTGTGACTCGTTTTTTCC--TTTTTTG-TTTGTTTGCGAACAGTTTCTGCTGCAGCA
CT-------------------------------ATAACAGATGATGTTTGGACCTGCATGCGCCCAGTTTACTGTATTAC
TTCTTGGCATTTCTCCATTGATTTCTTTAGGCGTGTTTCTTGTGATTGATAATTTGCTCTGTCT--GGTTAAGCAAACTG
GGAGGGAACAAAATGATGATGTGCTTATATTTAG--------TTCAAGTTTCTGCAGCTGCTATTCCATCATCAAAAAGC
ATGCATGTGACGAGCTGCATATATATATA----GTTTATTCAGT---------------GATTCAGATAAGTGTAATTTC
TGTTGGTGTAAATCCATCATCATGTTGAAAGCTAGCATGATTGATTGATTTGTCATTCATAC------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS-------SS----------------------S-S-------SSSS------------------
-----------S---S-------------------------------SSSSSSS---------------SSS---SSS--
------------------SSSSS-----------S-----S-S--S--------------S--SSSSSSSSSSSSSSSSS
SSSS-------------------------------------------SS------------------------------S
S-----------S---------------S---SS----------------------------S--SSSSSSSSSSSSSS-
S-SSSSS---SS-SSS-SS---S-SS-SSSSS-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
---------S-------S------------------SS---------------S--------------------------
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------------------------------------------------------------------SS-S----------
--S--S----------S------S-SSSSS-----------------S---------S------------S--S---S--
---------S--------S-S---S-------------------------------------SS----------S-----
------S--S---S--------------------------------S-SSS-----------S----S------------
---------------------------------------------------SS-SSS-----------------------
----------------------------------------S---------S-----------------------------
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---------------------------------------------S---------S-------------------S----
------------S------------------------S------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------S--------------------------------------------
---------------------------------------------S----------------------------------
----------------------------------------------------------------------S---------
----------------------------------S---------------------------------------------
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--------------------------------------------------------------------------------
-------------------------S------------------------------------------------S-----
----------------S----------SS-------------------------------------S-------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S---------------------------S--------------
--------------------------------------------------S-------------------------S---
----S--------------SSSSSS--S----------------------------------------------------
-------------------------------------------------S----------SSSSSS--S-----------
--------------------------------------------------------------------------------
-----------------------------SS----------------------------------------SS-------
-------------------------------------------------------------------------------S
--SSSS---------S-----------------------------------S-----S----------------------
---------S----------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------SS-------------S-----------------------S-----S-----------------
----------------------------------------------------------------------------S---
--------S--------SS----------------------S---------------------SS----------S----
---------------------------------SS---S---S----------------------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_477
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---------------------------------------------------------CATTCCGCGGATCTTGCTTG---
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>reverse_3949
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----------------------------AATGAACCCGGTGGACCATC--------------------------------
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>forward_547
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-----------------------------------------------AGGCAGGTGTTAATGGAGGC-------------
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>reverse_4118
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-------------------------------------TGTTGCTGCTCCAAGGGAAA-----------------------
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----------------------------------------------------------
