>input_sequence_64266
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----------------------------------------AGGTACATCGCCGGTGCCTTCGACTCCAGCATCTTGGCCA
TGCATCCCATGGAGCTGGACCCCAAGTTCAAGCACAATAACATGGACGGCATCCTTGTCTATGACGTCCGCACGCCGAGC
TTCGTGGTCGGCCCTCCGCAGAGTGGGGATCCAGATCCATATCCGGTCGACCCCATCTACATTCATGTTGGTGGTAGGCT
CTTTGCTCTCGCCGCCGACTCATTCCAGCTGCTCTACCCGCCACCGTATTACGAGTCTGACTGGGAGGAATTTGTGTGGG
CGTGGCAGAGCCTGCCGGAGCCGCCCTTTTCGCACGACCTCGTCGCTTGCTACACTGTGCATAGCGATCGGCGGACCATC
TTCGTCAGCGTCGGAGGGGAAGCCCCCGCCACCTACAGCTTTGACACGTCGGAGGCTCTCATGGACGACGGCGACTGCCG
GTGGAAGCATCACGGCGAGTGGACGATGCCGTTCGACGGCCGTGCTTACTTCATCCCTGAGCTGAGCGTCTGGGTTGGGC
TATCCGGGTGCAGACGCCAATCCGAGCACGTCCTTCAGATCGCAGCCATCGATGAGGTCTCTGAAAATTTTGATGGCGGC
CAGCAAGGCCTGGGCCTAAAGCTGTGCAAGGAGGAATTGAGCCCCCTTTACCCAGGCGAGGAGCCCGTCGGCGCCACCAG
CAAGGGGAATGAGGAGCAGCAGGATCGCGGCTGTCTTATGCGATTGACGACATTTTCTCTGAAATATGACAAGAATGGAG
GCCTGGCGATTGGCAAAGGCCGCCACATTCTGCAGTACAGCGTGCCACCAGAAGTTACTTTGTCGATGCTCAAGACTCCC
GTGGCATTCTGGATGTGAAAACCGTGATTATGTTTGACTGATGTAAACCCAGCTTGCCTGAATCCGCTCTACTATGCTGG
AGCGGATGGCCTGGACATTGACCGATCAAAAAACCCTGACCCTTTCG---------------------------------
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>chr2D_1_TraesCS2D01G451000
AAACAGACCGACCAACCGACTGGCTACGGGACGAACGAGTCAGCCAGCCAGCCAAGGCGTCTACCGGCCCGCATCGGCCG
CTTCCGACCGAGCCGCGTCAGTCACTTCCGAACGGCTGTTAGCGTCACCCCGTCACCGTTGTCGGCCCACGCATGATTGG
CCACGTCAAAACGAACTCAGAAAATGTTTCAGTGTTTTTTGCCACTGTCAATTTCTCGATCCAGGGCAAAGTGTCACGTT
TTGTAAAGAGATGATTTTTCGAGAGCTATAACACAAAAATGGTGGTTCTGTGCGTTTTACTCTGATTATTTCATTGTTCG
GCTAGGCGTAGGTGGACCCTTCCCTTGGTTATGGTATATACACGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTAGTTACGCTGAAGGTACCAAAACCGTATGTCGAGCAGACGATATGAGCAGACGAT
GAAGATCTGGAAGCGAAAAAGCAAAGAGGAAGGAACCAAGATGTCAAAGCCGAGGAAAGACGATTGAGGCCACGGCACCA
AGGAAAAGCCGTCACACCTCTATCTTGTCTTGGATGACTGGTCATGAGGATACAGCATCCGCAAGATCGATTTGTCAGCC
GGCGACCCAATCGATTCGTCATCCGGCGGCCCAGGCCAGCAGCCGGCGATCGTACGCCACGGCGTGCCAAGATAGCTGCC
AACAGCCTCGTTCAATTTCGAGGCACCGCGCGGCTATCCCAGGTACATCGCCGGTGCCTTCGACTCCAGCATCTTGGCCA
TGCATCCCATGGAGCTGGACCCCAAGTTCAAGCACAATAACATGGACGGCATCCTTGTCTATGACGTCCGCACGCCGAGC
TTCGTGGTCGGCCCTCCGCAGAGTGGGGATCCAGATCCATATCCGGTCGACCCCATCTACATTCATGTTGGTGGTAGGCT
CTTTGCTCTCGCCGCCGACTCATTCCAGCTGCTCTACCCGCCACCGTATTACGAGTCTGACTGGGAGGAATTTGTGTGGG
CGTGGCAGAGCCTGCCGGAGCCGCCCTTTTCGCACGACCTCGTCGCTTGCTACACTGTGCATAGCGATCGGCGGACCATC
TTCGTCAGCGTCGGAGGGGAAGCCCCCGCCACCTACAGCTTTGACACGTCGGAGGCTCTCATGGACGACGGCGACTGCCG
GTGGAAGCATCACGGCGAGTGGACGATGCCGTTCGACGGCCGTGCTTACTTCATCCCTGAGCTGAGCGTCTGGGTTGGGC
TATCCGGGTGCAGACGCCAATCCGAGCACGTCCTTCAGATCGCAGCCATCGATGAGGTCTCTGAAAATTTTGATGGCGGC
CAGCAAGGCCTGGGCCTAAAGCTGTGCAAGGAGGAATTGAGCCCCCTTTACCCAGGCGAGGAGCCCGTCGGCGCCACCAG
CAAGGGGAATGAGGAGCAGCAGGATCGCGGCTGTCTTATGCGATTGACGACATTTTCTCTGAAATATGACAAGAATGGAG
GCCTGGCGATTGGCAAAGGCCGCCACATTCTGCAGTACAGCGTGCCACCAGAAGTTACTTTGTCGATGCTCAAGACTCCC
GTGGCATTCTGGATGTGAAAACCGTGATTATGTTTGACTGATGTAAACCCAGCTTGCCTGAATCCGCTCTACTATGCTGG
AGCGGATGGCCTGGACATTGACCGATCAAAAAACCCTGACCCTTTCGGGCTCCTTAAACCGGCCATATACGTGCGGCTGT
TCGACACCCCTCGTATGCAACCCAAATCTGGAACGGATATGGGATGCGCGGACGCATATCAGCTCTTGCGCTGGTGCCAG
ACTGGTAGCTGGGCAGGAGCTAGGAGCACCGAGGTAGGAGCACGGGCGCGTCTAGTGAGCATACGACTGGCGGCGGGGTA
CAGCTCAGCAACTCACGGCGAGGCACGGCCTCGTCGTCGTGCAGCATGATGGTGAGACCGTGAGACAGCGGAGCTCGCGG
CTGAGGCTATGGGTGAATTTACTGGAGACCACAACCAGCTGGGAGGATGAAGCCTTCATTCAGACAGTGTTTTCAAAATT
CCAAGTAATCAAACTCAAGGGCGAGTGTCATCTTAGGCGGTGGGGGAAATTTTCATGAACTAAAAATAAATAGCCTGACA
AAATCGACAACGGGATTATTTTAGTTATTATCGAGCAACTCAGATTTGTCAGTACCATTTCCTT-ATGAGCATCCAAGGG
GGCACGTCAAA------GGTTTGCCGTTACTTTTGGCATCCTCGGCGTCGTCAAGGTCGTTTCTCTATAGCTTTCACCTG
TTGCCGTTTGTGGCCTACTTCCCGTCGATCACTGTGGCTCCCTGGAGTATAGGATGACGCTTGCAACCTGCAAGGGAGCA
ATCTACCAATTACCTAATACAAAAACCCTAGCCGCCGCCGGTTAGCTCGGCCTCTCTCGCACCCCTTTCTTTATTCCTCC
CCATTTCTCTGAATTTTCTCACCTAAGCTTCAGTTTATTGATCGATTGGAGAATTTTCTAGTATAAGTTGTGACAACTAT
GGACTGAAGAAGAAAATAGGCTGTACCGTCACTGCCAAATGCCACGACGACAGCGTCACACAGCCACCCCTCAAAAAATC
CTAGCATGGTGATTTCAAAAAAAAATCCTAGCATGGTAGTGAGTGCCAGTCACTGCGAGTGGCAAGGTCAAGGAAGTGCT
ACAAAGCGCCAAGA
>chr2A_2080
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-------------------------------------------------------------------------------G
ACTGGTAGCTGGGCAGGAGCGGGGAGCACCGACGCAGGAGCACGGGCGTGTGTAGTGAGCACACGATTGGCGGCAGGGTA
TGGCTCGGCAACT----------CACGGCCTCGTCGTCGTGCAGCATGATGGTGAGAT--------AGCGGAGCTCGCAG
CTGAGGCTATGGGTGAATTTACTGGAGACAACAACCAGCTGGGAGGATGAAGAGTTCATTCAGACAGTGT--------TT
CCAAGTAATCAAACTCAACGGCGAGTGTCATCTTAGGGGGT-GGGGGAATTGTCATGAACGGAAGATAAATAGCCTAACA
AAATCGACAGCGGGATTATTTTGGTTATTATTGAGCAACTCAGATCTTTCAGTACCATTTCCTTCATGAGCATCCAAGGG
CGCACGTCAAAGGGAGTGGTTTGCCGTTACTTTTGGCACGTCAAAGGGAGTGTTTCCA----------------------
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----------------------------------------GTTGGCTCGGCCTCTCTCGCATCCCTTTCTTTGTTCCTCC
CTATTTCTCTGAATTTTCTTAACTAAGCTTCAGTTTATTGATCGATTGGAGAATTTTCTAGTATAAGTTGTGACAACTGT
GGACTAGAGAAGAAAATAGGCTGTACCGTCACTTTCAAATGCCACTACGACAGCATCACACAGCCACCGCTAAAAATCC-
--------------------------------------------------------------CAAGGTCAAGGAAGTGCT
ACAAAGCGCCAAGA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
--------------------SS----------S-S-------------S--S---------S----S-------S-----
SS----S------SSSSSSSSSS----------------------------------SSSSSSSSS------------S-
-----------------------------S----------------------SS----------------SSSSSSSS--
------------------S------------------S---S----S----S--------SS--S-----------S---
---------S------------S--------S-------------S-S--------------------------------
S-------------------------------------SSSSSSSS-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------------S----------S-------
-S-----------------S-S--------------------------------------------------------S-
-----SS--------------------------SS----------S--------S-------------S--S----SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
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>forward_234
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------------------------------------------------------CTCGATCCAGGGCAAAGTGT------
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>reverse_1700
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-------------------CAGGATCGCGGCTGTCTTAT-----------------------------------------
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>forward_235
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-------------------------------------------------------TCGATCCAGGGCAAAGTGTC-----
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>reverse_1701
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--------------------AGGATCGCGGCTGTCTTATG----------------------------------------
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>forward_329
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---------------------------------------------------------------------TTCATTGTTCG
GCTAGGCGT-----------------------------------------------------------------------
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>reverse_2029
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----------------------------TGGAACGGATATGGGATGCG--------------------------------
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