>input_sequence_64050
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------------------AGAGAGAGATTGTTCAGAGATGAAGAGCAGCAGCG---TCCAAGAAGCGTGTGAGGATCAGC
TGTCCGAGATCAGCAGCCAGGCGGC---------------GTCCAACAACAACGAGGCGTCCAACACCTCCTCCCGTCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGG---CCGCCGCCGCGGCGGCCACCGCCACCGCCGAGTCGAGCAC
CACCGACAGCAAC---GGCGGCCCGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAACTACTGCCAGAGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACGCTGGCCCG-GCGCGCG
GTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTCTACGGCTCCCCCGGG
CTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCCGGGCGCGGCGGCGGCGGCGCAGGCGGAGCGGCAGCAGCA
CCAGCA------GCAGGACGCCGCCGTCCTCGCGGCCACGCCGGCGCGCGCGCGGG--CGCTGCTGGGCCCGATGCCGTT
CCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCACCCCCACCGAGCGCCGGCGTGCTCC
CCCTCCTCCACTCAGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCATCGTGGTGCAAGCCGACGAGGAGCC
CGACCTGACGCTCAGACTCTAGCCGCCATCCGTACGCACGCCGTCGATCGCTACGCTTATACGTACTGCTAGGTTGGTGC
AACTCGTCAGGCTCCCGACGTCGATCAACGGATCATGATGGTAGACGACGACCCGTATTTGTTTCATGCGTGCGTACGTA
CGTA------------CGTGGAAGTATTTCTGTACAGTTTTGGTGCTCTTCTGTGGTATTGGTAGTAGCGTGTAG----C
CTACAACTTCCCGCGGTATA---AA-------------------------------------------------------
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>chr4B_1_TraesCS4B01G229200
GTCTGGCAGTAGTGATCTGATGATATTTGCAATGGCATGGACAAAAACAAGT-----CCAACCTAGTGGTCTTCAGAAAC
ACTGGTATCGGATCACTTGTGGCAGGCACATAAAAAACACCACCAGGGAAGTCTTGTTTGTTGGGCCTCTTTGACAAAAC
AAAAAAGCATTCTCTGTTGGTGAATTCGGCGTAGCTGTCCAGCATTTATATTCGTGCTCCCATCTGACGATTCAGATCTC
CAGAAACACCACA-GGGGTTTGGATGGGAACACCAGGGCTTCCATCTTTTCATGACAGCAACTGAATGTGCTATTCCTGG
ACCCTTTT----CTTTCAGATAAGGTTCCGTTTTAGAGATTCCCAGACCAGAAAAGAGGCCACGCTTTTCATCTGTTTGT
CCTCTGATTTGGCATCAAAGGTAGCATATCCAGGCTTAGCAATGGATCGGATACTTGCCTTGATCTGTCTGCACTCCACA
TTCAGACACATTCAGTTATTCAGCACACATGAAGCTTGAAAAATTCTGCTTGTGCTCCTCTAGTAGCCCTTTAGTCATCT
GGATAAATCTGAAC---TTGCTTGGATTCCTAAATCGACAGCATAATGAACTGTCGTCTTCGGAATCACGTAAGCCGGAA
GCAATTTCGGAGAACAAAAGATGTGTCAATTCAGACTCTGTTGTGCTTATCCACAGG-----------GCAAGCACTCCC
ATTTCTAAGATTCAGTTTGTCATGATCTCCACACCGACAATAGCAACACATGCTATTTTATCCTTGTACAACAACTCAGG
ACTCATCTGCACTG----------------------TGGTGAGTCAGTCAATGAGTGCAGCTGAGACTAGAAACAAGAGA
TCCTTTTCAGTTTTATGCATCAAATCATCTCACCAAGTACAGAAATCAAATCATCTCACCAAGTACAGAAGAACACATGC
ACTTGCTTACATGACTTGGCTTGTTCTC--------TGGATGCATGCAGGTGAGAGATAGATAAAGGAGCAAACAAAGTG
CAGCGA----AAGAAGACAGAGAGAGATTGTTCAGAGATGAAGAGCAGCAGCG---TCCAAGAAGCGTGTGAGGATCAGC
TGTCCGAGATCAGCAGCCAGGCGGC---------------GTCCAACAACAACGAGGCGTCCAACACCTCCTCCCGTCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGG---CCGCCGCCGCGGCGGCCACCGCCACCGCCGAGTCGAGCAC
CACCGACAGCAAC---GGCGGCCCGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAACTACTGCCAGAGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACGCTGGCCCG-GCGCGCG
GTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTCTACGGCTCCCCCGGG
CTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCCGGGCGCGGCGGCGGCGGCGCAGGCGGAGCGGCAGCAGCA
CCAGCA------GCAGGACGCCGCCGTCCTCGCGGCCACGCCGGCGCGCGCGCGGG--CGCTGCTGGGCCCGATGCCGTT
CCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCACCCCCACCGAGCGCCGGCGTGCTCC
CCCTCCTCCACTCAGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCATCGTGGTGCAAGCCGACGAGGAGCC
CGACCTGACGCTCAGACTCTAGCCGCCATCCGTACGCACGCCGTCGATCGCTACGCTTATACGTACTGCTAGGTTGGTGC
AACTCGTCAGGCTCCCGACGTCGATCAACGGATCATGATGGTAGACGACGACCCGTATTTGTTTCATGCGTGCGTACGTA
CGTA------------CGTGGAAGTATTTCTGTACAGTTTTGGTGCTCTTCTGTGGTATTGGTAGTAGCGTGTAG----C
CTACAACTTCCCGCGGTATA---AAGATTCATGTGATCAATC--AATCATGTTGCTGTGCCCATGAATTCTGAACTCCAG
AATGTTTTC---CCCTTTTCCTTGCTAATAATGTTGTCGTGTGAGACTCCCCGTGCCGGCCAGTGTGGCGTCGACACGCC
TCCCCAGCCGTCGCTCTCGGCGGCGGAGCCGGAGTAGTACAACGGTGAGCGACGGGTCGAGGTCGAGGCCGTCGCTGCTG
CTGTCAGACCATGATGTCCTAACAGGAGTTGCAGCCTGTAGCTGTGAACAGGATCAG-----GGCGAACAACCGAACAAG
AAAATCCACGCGGGATCCCAACGCACACGCCAACAGTGTGGCCTGGCCTGGCCTGCGCCGGGAAAAAACATCGAAAAGGA
GAGGAGAAAATGACACGCTGGGAAGTTGAAATATTCTCATGACGACGATGACAACTATAGCAT-------------AGCA
TGGGGCTAAATGCACAGGTCATGACCCAACGACTGCACTCTGCACACCATCAGGCAATGAGCAAGCAATGAACTGAAAAT
GCTGTCAGGTTATATCCGCCGGCGCAAGGTTAGGCCTCCTCCGCTTTATAATAACAACAGTTAACAACGGGTAGTAAAAA
AGAACAAATTACAGATGGAACACAGCAACTTTGGTTTAGAAACCATTACACTCTAATGGACAACAACGGCG----ATCTG
CAGGCATTCAGGAGCAGCAGGTGGTGGTTTTTTTTGTTTTTTTACCGGGATTCCTCTCTACACCCACATCTTCTTTGTGG
CCTCCATCCGCTCGAGCAGGCCCTGGATCTCGGTCTGCATCCGCAGCTTCATCTTGTGGTAGTCGTAGTGCGAGTTCTCC
AGCGTCTTGAGCTCCTCCATCTTCTTCCTCCTCTTCTCCTCCGCCTCCTGGAAGCACAGCTTCGCCACCTTCGATGTGTA
CTCCTCCTCCATGCTCTGGATTCTGTTGCGAACCATCTGCCGGTAGTTCTCCACCTCCTTCCGGGCATCGTCAGCCAGCT
TCTGGAACAGTT
>chr4D_1
GTCTGGTAGTGGTGATCTGGTGATATCTGCAATGGCATGGACAAAAACAAGT-----CCAACCTAGTGGTCTTCAGAAAC
ACTGGTATCAGATCACTTGTAGCAGGCACATC-AAAACACCACCAGGGAAGTCTTGTTTCTTGGGCCTCTTTGACAAAAC
AAAAAAGCATTCTCTGTCGGTGAATTCGGCGTAGCTGTCCAGCATTTATATTCGTGCTCTCA---------TCAGATCTC
CAGAAACACCACA-GGGATTTGGATGGGAACACCAGGGCTTCCATCTTTTCATGACAACAACTGAATGTGCTATTCCTGG
ACCCTTTC----CTTTCAGATAAGGTTCCGTTTTAGAGATTCCCGGAGCAGAAAAGAGGCCACGCTTTTCATCTGTTTGT
CCTCTGATTTGGCATCAGACGTAGCATATCCAGGCTTAGCAATGGATCGGATACTTGTCTTGATCTGCCTGCACTCCACA
TTCAGACACATTCAGTTATTGAGCACACATGAAGCTTGAAAAATTCTGCTTCTGCTCCTCTAGCAGCCCTTTAGTCATCT
GGATAAATCTGAAC---TTGCTTAGATTCCTAAATCGACAGCATAATGAACTGTCGTCTTCGGAATCACGTAAGCCGGAA
GCAATTTCGGAGAACAAAAGGTGTGTCAATTCAGACTCCATAGTGCTTATCCACAGGGCTATCTGATTGCAAGCACTCCC
ATTTGTAAGATTCAGTTTGCCATGATCATCACACTGACAAGAGCAACACATGCTATTTTATCCTTGTACA----------
----------ACTG----------------------TGGTGAGTGAGTCAATGAGTGCAGCTGAGACTAGAAACAAGCGA
TCCTTTTCAGTTTG-TGC--------------------------ATCAAATCATCTCACCAAGTACAGAAGAACACATGC
ACTTGCTTACATGACTTGGCTTGTTCTC--------TGGACGCATGCAGGTGAGAGATAGATAAAGGAGCAAACAAAGCG
CAACGAAAGAAAACAGACAGAGAGAGATTGTTCAGAGATGAAGAGCAGCAGCG---TCCAAGAAGCGTGTGAGGATCAGG
TGTCCGAGATCAGCAGCCAGGCGGC---------------GTCCAACAACAACGAGGCGTCCAACACCTCCTCCGGCCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGGCCGCCGCCGCC------GCCACCACGACCGCCGAGTCGAGCAC
CACCGACAGCAACAACGGCGGCGGGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAACTACTGCCAGAGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACGCTGGCCCG-GCGCGCG
GTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTCTACGGCTCCCCCGGG
CTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCAGGGC------GCGGCGGCGCAGGCGGAGCGGCAGCAGCA
CCAGCA------GCAGGACGCCGCGGTCCTGGCAG---CGCCGGCGCGCGCGCGGG--CGCTGCTGGGCCCGATGCCGTT
CCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCACCGCCACCGGGCGCCGGCGTGCTCC
CCCTCCTCCACTCAGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCGTCGTGGTGCAAGCCGACGAGGAGCC
CGACCTGACGCTTAGACTCTAGCCGCCATCCGTACGC----CGTCCATCGCTGCGCTTATACTACGTACTAGGTTGGTGC
AACTCGTCAGGCTCCCGACGCCGATCAACAGATCATGGTGGTA---GACGACCCGTATTTGTTTCATGCGTGCGTGGGTA
CGTACGTACGTACGCTCGTGGAAGTATTTCTGTACAGTTTTGGTGCTCTTCTGTGGTATTGGTAGTAGCGTGTAC----C
CTACAACTTCCCGCGGTATATTAAAGATTCATGTGATCAATC--AATCATGTTGCTGTGTCCA-------TGAACTCCAG
AATGTTTTTT--CCCTTTTCCTTGCTAATAATGTTGTCGTGTGAGACTTCCCGTCCCGGCCAGTGCGGCGTCGACACGCC
TCCCGCGCCGTCGCTCTCGGCGGCGGAGCCGGAGTAGTACAACGGTGAGCGACGGGTCGGGGTCGAGGCCATCGCTGCTG
CTGTCGGACCATGATGTGCTAACAGGAGTTGCAGCCTGTAGCTGTGGCCAGGATCAG-----GGCCAACAACCGAACAAG
AAAATCCACGCGGGATCACAACGCGCACACCAACAGTG------------------------AAAAAACATCGAAAAAGA
GAGGAGAAAATGACAAGCTGGGAAGTTGAAATATTCCCATGACGACGATGCCAATTATAGCATAGCATAACATGGCATGG
GGCG---AAATGCACAGGTCATGACCCAACGACTGCACTCTGCACACCATCAGGCAATGAGCAAGCAACGAACTGAAAAT
GCTGTCAAGTTATATCCGCCGGCGCAAGGTTAGGCCTCCTCCGCTT----ATAACAACGGTTAACAACGGGTAGTAAAAA
AGAGCAAATTACAGATGGAACACAACAGCTTTGGTTTAGAAACCATTCCACTCTAATGGACAACAACAGCAACGCATCTC
CAGGCATTCAGGAGCAGCAGGCGGTGATTTTT--TGTTTTTTTACCGGGTTTCCTCTCTACACCCACATCTTCTTTGTGG
CCTCCATCCGCTCGAGCAGGCCCTGGATCTCGGTCTGCATCCGCAGCTTCATCTTGTGGTAGTCGTAGTGCGAGTTCTCC
AGCGTCTTGAGCTCCTCCATCTTCTTCCTCCTCTTCTCCTCTGCCTCCTGGAAGCACAGCTTCGCCACCTTCGACGCGTA
CTCCTCCTCCATGCTCTGGATTCTGTTGCGGACCATCTGCCGGTAGTTCTCCACCTCCTTCCGGGCATCGTCAGCCAGCT
TCTGGAACAGTT
>chr4A_8
-------AGTGGTGATCTGGTGATATTTGCAATGGCATGGACAAAAACAAGTCCATGCCAATCAAGTGGCCTTCAGAAAC
ACCAGCATCAGATCACCTGTAGCAGGCACATAAAAAACACCACCAGGGAAGCCTTGTTTCCTGGGCCTCTTTGACAA---
--AAAAGCATTCTTTGTTGGTGAATTCGGCGTAGCTGTCCAGCATTTATATTCGTGCTCTCA---------TCAGATCTC
CAGAAACACCACAGGGGTTTTGGATGGGAACACCAGGGCTTCCATCTTTTCATGACAACAACTCAATGTGCTATTCTTGG
GCCCTTTTCTTTCTTTCAGATAAGGTTCCGTTTTAGAGATTCCCGGACCGGAAAAGAGGCCACGCTTTTCATCTGTTTGT
CCTCTGATTTGGCATCAGAGGCAGCATATCCAGGCTTAGCAATGGATCGGATACTTGTCTTGATCTGACTGCACTCCACA
TTCAGACACATTCAGTTATTCAGCACACATGAAGCTTGAAAAATTCTGCTTGTGCTCCTCTAGCAGCCCTCTAGTCATCT
GGATAAATCTGAACTATTTGCTTAGATTCCTATTTCGACAGCATAATGAACTGTCGTCTTCGGAATCACGTAAGCCCGAA
GCAATTTCGGAGAACAAAAGGTGTGTCAATTCACACTCCATAGTGCTTATCCACAGGGCTGTCTAACTGCAAGCACTCCC
ATGTCTAAGATTCAGTCTGTCATGATCACCGCACTGACAAGAGCAACACATGCTATTTTATCCTTGTACA----------
----------ACTG----------------------TGGTGAGTGAGTCAATGAGTGCAGCCGAGACTAGAAACAAGAGA
TCCTTTTCAGTTTTATGC--------------------------ATCAAATCATCTCACCAAGTACAGAAGAACACATGC
ACTTGCTTACATGACTTGGCTTGTTCTC--------TGGACGCATGCAGGTGAGAGATAGATAAAGGAGCAAACGAAGTG
CAGCGAGAGGAAGAAGACAGGGAGAGATTGTTCAGAGATGAAGAGCGGCAGCGGCGTCCAAGAAGCGTGTGAGGATCAGG
TGTCCGAGATCAGCAGCCAGGCGGC---------------GTCCAACAACAACGAGGCGTCCAACACCTCCTCCCGCCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGA---CCGCCGCC------GCCACGACGACCGCCGAGTCGAGCAC
CACCGACAGCAAC---GGCGGCGCGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAACTACTGCCAGAGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACGCTGGCCCG-GCGCGCG
GTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTCTACGGCTCCCCCGGG
CTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCAGGGC------GCGGCGGCGCAGGCGGAGCGGCAGCAGCA
CCAGCACCAGCAGCAGGACGCCGCCGTCCTCGCGGCCACGCCGGCGCGCGCGCGGG--CGCTGCTGGGCCCGATGCCGTT
CCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCGCCGCCGCCGGGCGCCGGCGTGCTCC
CCCTCCTCCACTCCGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCGTCGTGGTGCAGGCCGACGAGGAGCC
CGACCTCACGCTTAGACTCTAGCCGCCGCCCGTACGC----CGTCGATCGCTACGCCATTACGTACTGCTAGGTTGGTGC
AACTCGTCAGGCTCCCGACGTCGATCAACGGACCATGATGGTAGACGACGACCCGTATTTGTTTCATGCGCGCGTG----
CGTACGTAGGTACGCTCGTGGAAGTATTTCTGTACAGTTTTGGTGCTCTTCTGTGGTATTGGTAGTAGCGTGTACCCTAC
CTACAACTTCCCGCGGTATA---AAGATTCATGTGATCAATCAAAATCATGTTGCTGTGTCCA-------TGAACTCCAG
AATGTTTTTTTTCCCTTTTCCTTGCTAATAATGCTGTCGTGTGAGACTCCCCGTCCCGGCCAGTGCGGCGTCGACACGCC
GCCCTCGCCGTCGCTCTCGGCGGCGGAGCCGGAGTGGTACGACGGTGAGCGACGGGTCGAGGTCGAGGCCATCGCTGCTG
CTGTCGGACCATGATGTCCTAACAGGAGTTGCAGCCTGTAGCTGTGACCAGGATCAGGGCCAGGCCAACAACCGAACAAG
AAAATCCACGCGGGATCACAACGCGCACACCAACAGTGTGGCCTGACCTGCCCAGGGAG----AAAAACATCGAAAAAGA
GAGGAGAAAATGACACGCTGGGAAGTTGAAATATTCTCATGACGACGATGCCAATTGTAGCATAGCATAGTAGCACAGCA
TGGGGCTGAATGCAGAGGTCATGACCCAACGACTGCACTCTGCACACCATCAGGCAATAGGCAAGCAATGAACTGAAAAT
GCTGTCAAGTTATATCCGCCGGCGCAAGGTTAGGCCTCCTCCGCTTT---ATAACAACAGTTAACAACGGGTAATAAAAA
AGAACAGATTACAGATGGAACACAGCAGCTTTGGTTTAGAAACCATTCCACTCTAATGGACAACAACAGCAACGCATCTC
CAGGCATTCAGGAGCAGCAGGTGGTGATTTTT--TGTTTTTTTACCGGGCTTCCTCTCTACACCCACATCTTCTTTGTGG
CCTCCATCCGCTCGAGCAGGCCCTGGATCTCGGTCTGCATCCGCAGCTTCATCTTGTGGTAGTCGTAGTGCGAGTTCTCC
AGCGTCTTGAGCTCCTCCATCTTCTTCCTCCTCTTCTCCTCCGCCTCCTGGAAGCACAGCTTCGCCACCTTCGACGCGTA
CTCCTCCTCCATGCTCTGGATTCTGTTGCGGACCATCTGCCGGTAGTTCTCCACCTCCTTCCGGGCATCGTCAGCCAGCT
TCTGGAACAGTT
>chr7B_752
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-------------------------------------------------------TTTTATCCTTGTACA----------
----------ACTCAACACTCGTCTACACTTTGGCATGGTGAGTCAGTCGATGAGTGCAGCTGAGACTAGAAACAAGAGA
TCCTTTTCAA-TTCATGC--------------------------GTCAAATCATCTCACCAAGAAAATAAGAACACATGC
ACTTGCTTACATGACTTGTCTTGTTCTC--------TGGATGCATGCAGGTGAGAGATAGATAAAGGAGCAAACAAAGTG
CAAAGAAAGAAGACAGAGAGACAGAGATTGTTTAGAGATGCCGAGCAACATCA---TCCAAGAAGTGTGTGAGGCTCAGT
TGTCCAGGATCATCAGCCAGGCAGCATCCAACAATGAGGTG------------------TCCAAAACCTCCTCCGGACCA
AAGCTCGCCCTCGACCTATCGCTCACCGTCACCATTGCGT---CCACC------GCCACCACAACCTCCGAGTGGAGCAC
AACTGTCGATAAC---AGTGGCGCGAAGGCCGCACGCGAGCCGACACGAGTGTTCATGTGCAACTACTTCCGCAGGAAGT
TCTTCAGCTCGCAGGTGCTGGGCGGGCACCAGAAT--------GTGCACTGGCAGGAGCGCACGCTGGCCCG-ACGTGCG
GTGCACCAGCTCGAGGCAAACCCCTATGGCTAAGCCGACGTGTCCTCCCT--------TCCGCCCTATGTCTCGCCCGA-
CTGTACCCCATCGGCATCCAGGCGCACGC---------------------------------------------------
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>chr5D_903
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--------------------------------------------------------------------AAGAACACATGC
ACTTGCTTACATGACTTGGCTTGTTCTCTGGATGCATGCATGCATGCATGTGAGAGATAGATAAAAGAT----CAAAGTG
CAGCGA----AAGAAGACAGAGAGAGATTGTTCAGAGATGAAGAGCAACAGCG---TCCAACAAGCGTGTGAGGATCAGC
TGTCCGACATCAGCAGCCAGGCGGC---------------G------------------TCCAACACCTCCTCCCGCCCC
AAGCTCGCTCTCGACCAGTTGCTCACCATCACCGCCG---CCGCCGCCGC------CACCACGACCGCCGAGTTGAGCAC
CACCAAAAGCAAC---GGCGACGCGCAGGCCGCGCGCGAGCCAACGCGGGTGTTCACGTGCAACTACTGCTAGACGAAGT
TCTTCAGCTCGCAGGCGCTGGGTGGGCAGCAGAACACAGTAACGCACACCGG----------CGGTGCCCCG-GCGCGCC
GTGCACCGGCTCGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTCTACGGCTCCCCCGAG
CTGTACCCCATCGGTATCCAGGCGCACGCGTCGGTGCACCCAGGCACGGCGGCG--------------------------
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>chr3A_988
AGAGAGAGAGAG--------------------------------------------------------------------
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----------------AGAGAGAGAGATTGTTCAGAGACGAAGAACAGTAGCG---T--AAGAGGTGTGAGAGGATCAGC
TGTCCGACATCAGCAGCCAGGCGGC---------------GTCT---AACAACGAGGCATCCAACACCTCCTCCCGCCCC
AAGCTCGCCCTCGACTTGTCGCTCACCGTCACCGCTG---CCGA------------CACCACGACCGCGAAGTCGAGCAC
CACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAACTACTGCCAGGGGAAGT
TCTTCAGCTCGCACGCGCTGGGCGGGCACCAGAAC--------GCGCACCAGCGGGAGCGCATGCTGGCCCG-GCATGCG
GTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTCTATGGCTCGCCCGTG
CTGTACCCCATCGGCATCAAGGTGCACGCACCGGTGCACCC---C------GCGGCGGCGCAGGCGGAGCGTCAGCAACA
---------------GGAAGCCGCCTCCCTCGCTG---CGCCG--GCGCGCGCGGG--CGTTGCTGGGCCCGATGCCGTT
CGTCATGGGCGACGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTCAGGCCACCACCGCCGGGCGCCGGCGTGCTCC
CTCTCCTCCACTCCGGCCACAAC---------------------------------------------------------
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>chr2D_993
A-----AGAGAG--------------------------------------------------------------------
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----------------AGAGAGAGAGATTGTTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGTGCGAGGATCAGC
TGTCCGACATTAGCAGCCAGGCAGC---------------GTCT---AACAACGAGGCATCCAACACCTCCTCCCGCCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCG---CCGA------------CACCACCACCGCAAAGTCGAGCAC
CACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAACTACTGCCAGGGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCTGGAGCGCACGCTGGCCCG-GCGTGCG
GTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTCTATGGCTTGCCCGTG
CTGTACCCCATCGGCATCAAGGCGCACGCGCCGGTGCACCC---C------GCGGCGGCGCAGGCGGAGCGGCAGCAACA
---------------GGAAGCCGCCTCCCTCGCCG---CGCCG--GCGCGCGCGGGGGCTTTGCTGGGCCCGATGCCGTT
CCTCATGGGCGGCGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTCAGGCCACCACCGCCGGGCGCCAGTGTGCTCC
CTCTCCTCCACTCCGGCCACAAC---------------------------------------------------------
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>chr7B_993
A-----AGAGAG--------------------------------------------------------------------
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----------------AGAGAGAGAGATTGTTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGTGTGAGGATCAGC
TGTCCGACATCAGCAGCCAGGCGAC---------------GTCT---AACAACGAGGCATCCAACACCTCCTCCCGCCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCG---CCGA------------CACCACGACCGCAAAGTCGAGCAC
CACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAACTACTGCCAGGGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACGCTGG-CCCTGCGTGCG
GTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCACGGTCCCACCAGCTCTATGGCTCACCCGTG
CTATACCCCATCGGCATCAAAGCGCACGCGCCGGTGCACCC---C------GCGGCGGTGCAGGTGGAGCGGCAGTAACA
---------------GTAAGCCGCCTCCCTCGCTG---CGCCG--GCGCGCGCGCGGGCATAGCTGGTCCCGATGTCGTT
CCTCATGGGCGGCGACGAGGAG-TCAGCTTCCGGTGCCCCGACGGCTTCAGGCAACCACCGCCGGGCGCCGGCGTGCTCC
CTCTCCTCCACTCCGGCCACAAC---------------------------------------------------------
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>chr4B_994
------AGAGAG--------------------------------------------------------------------
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----------------AGAGAGAGAGATTGTTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGTGCGAGGATCAGC
TGTCCGACATCAGCAGCCAGGCGGC---------------GTCT---AACAACGAGGCATCCAACACCTTCTCCCGCCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACTGCCA---CCGA------------CACCACGACCGCAAAGTCGAGCAC
CACTAACAGGACC---GGCG-------------------------GCGGGTGTTCACGAGCAACTACTGCCAGGGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACTAGAAC--------GCGCACCGGCGAGAGCGCACGCTGGCCCG-GCGTGCG
GTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTCTATGGCTCACCCGTG
TTGTACCCCATTGGCATCAAGGCGCACGCGCCGGTGCACCC---C------GCGGCGGCGCAGGCAGAGCGGCAGCAACA
---------------GGAAGCCGCCTCCCTCGCTG---TGCTGGCGCGCGCGCGGG--CGTTGCTAGGCCCGATGCTGTT
CCTCATGGGCGGGGACGAGGAGGTCAGCTTCGGGTGCCTCGACAGCTTCAGGGCACCACCGCCGGGCGCCGGCGTGCTCC
CTCTCCTCCACTCCGGCCACAAC---------------------------------------------------------
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>chr4D_1013
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------------------------------TTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGCGTGAGGATCAAC
TGTCCGACATCAGCAGCCAGGCGGC---------------GTCT---AACAACGAGGCATCCAACACCTCCTCCCGCCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCG---CCGA------------CACCACAACCGCAAAATCGAGCAC
CACCGATAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAACTACTGCCAGGGGAAGT
TCTTCAGCTCGCAGGCGCCGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACGCTGG-CCG-GCGTGCG
GTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGCCCTCCCT--------CCAGCTCTATGGCTCGCTCGTG
CTGTACCCCATCGGCATCAAGGCGCACGCGCCGGTGCACCC---C------GCGGCGGCGCAGGCGGAGCGGCAGCAA--
---------------GGAAGCCGCCTCCCTTGCTG---CGCC------------GG--CGTTGCTGGCCCCGATGCCGTT
CCTCATGGGTGGCGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTCAGGCCACCA----------CCGGCGTGCTCC
CTCTCCTCCACTCCGGCCACAACCTGGGGCTTGGGCAGCAGCGGCA----------------------------------
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>chr1D_1013
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------------------------------TTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGCGTGAGGATCAAC
TGTCCGACATCAGCGGCCAGGCGGC---------------GTCT---AACAACGAGGCATCCAACACCTCCTCCCGCCCC
AAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCG---CCGA------------CACCACAACCGCAAAATCGAGCAC
CACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAACTACTGCCAGGGGAAGT
TCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACGCTGG-CCG-GCGTGCG
GTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTCTATGGCTCGCTCGTG
CTGTATCCCATCGGCATCAAGGCGCACGCGCTGGTGCACCC---T------GCGGCGGCGCAGGCGGAGCGGCAGCAA--
---------------GGAAGCCGCCTCCCTTGCTG---CGC---------CGCGGG--CGTTGCTGGGCCCGATGCCGTT
CCTCATGGGTGGCGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTTAGGCCACCA----------CCGGCGTGCTCC
CTCTCCTCCACTCCGGCCACAAC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>SNPs
------S------------S------------------------------------------------------------
---------S----------S--------------------------------------S--------------------
-----------------------------------------------------------S--SSSSSSSSS---------
-----------------S---------------------------------------S----------------------
--------------------------------------------S-----------------------------------
-----------------S---------------------------------------S---------S------------
---------------------------------------------------------------S----------------
-----------------------S--------------------------------------------------------
--------------------S-----------------SS-S--------------------------------------
---------------------------S------S-----S-----------------------------SSSSSSSSSS
SSSSSSSSSS----------------------------------------------------------------------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------SSSS------S-------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S------S---------------
------------------------------------------------------S-------------------------
------------S------------------------SSSS---------------------------------------
---------------------------------------------------------------------------SS---
--------------------------------------------------------------------------S-----
-----------------------------------------------------------S---SSSSSSS----------
--------S---------------------------------------------S----------S--------------
----SS----------------------------------------------------------------S---------
-----S-----------------------------------------S-----------------S--------------
-----------------S------S---S----------------S----S--S-S-SSSSS---------------S--
--------------------------------------------------S---S-------------------------
--------------------------------------------------------------------------------
-------S---------------------------------------SSS------------------------------
---------------------------S-------------------S-------------------S--S--------S
--------------------------S-----SS---------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-S---
------------------------------S-------------------------------------------------
------------
>forward_229
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATTCGTGCTCCCATCTGACG-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------
>reverse_1853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CAGACTCTAGCCGCCATCC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_258
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CT
CCAGAAACACCACAGGGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------
>reverse_2368
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ACAGGATCAGGGCGAACAAC-------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
