>input_sequence_64014
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---------------------------------------------------------------------------ATGGA
GGGGAGCAGCAGCGGCAAG---CACTTCATGCTCGTCCACGGCCTCGGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTCCGCGCCGCGGGGCACCGGGTCACCGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCGCGCATGGACGAG
GTGCCGTCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCCGCGGCACCGGCCGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACATCGCGCTCGCCATGGAGAGGTTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTGG
CCGCGTGCATGCCGTGCGTCGGCAGGCACATGGGCGTCACCACGGAGGAGGTGGGTAATTACTCCGTGCTA---------
----------------------GTAAATTTTACACAC-------------------------------------------
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-----------------------------------------------CTCAGAAGTCAGAGGAGCTGCGATCG-------
--------ATCATGACGACGACTCTGATTT-CCATCGATTCTCG---CTAGATCATGAGACGGATCAAGCCCGATTTCTT
CATGGACATGAAGAGGATGGTTCTGAACACGAGCCAGGGCCCTCGACCTGCACTCGTGTTTGGCCCAAAATTACTGGCAG
CAAAACTGTACGATCGAAGCTCAGCTGAGGTAATAGCAGGAGTCCATTCTTTCCCGTCAC-AAATGTTATT---------
------------------------------TACGATGCTGACAGTGCTTTTACGTACG----GCATGCAGGATCAGACGC
TGGCTACGATGCTGGTGAGACCGGGCTGCCAGTTCTTGGATGACCCGACGATGAAGGACGAGGCTATGCTCACCGACGCC
AACTACGGGTCGGTGAACAAGGTGTACGTGGTGGCGATGGCTGACGCTTCAAACTCCGAGGAGATGCAGCGCTGGATGGT
CGACC---TGAGCCCCGGCACGGTGGCCGAAGAGATCGCCGGAGCCGACCACATGGCCATGTGCTCCAAACCCAGGGAGC
TCTGTGGTGTCCTGCTCCGGATCGCCGACAA------GTATGAATGA---------------------------------
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-------
>chr3D_1_TraesCS3D01G449200
CTATGAAAAACTTGTATTACTGATGTAAATCGTAGTTAGAATAAGGCTAGTGATTGTCTGACTAGTTTTA-TAGAACTGA
AGGCAGAACCATAGCGTGGATCGGTTCAGGCCCTTCTATGGTCATCTACTTGGTGATTGAGGATTGTAAGGA-CATTGTG
AGTAAGCAATACAATTTTTTCACCCGCAAAAGAAAAGTTTGTGTTTATGTGTTTGAGGATTGTAAACACCGGACTTCGAG
CCCCCTCCTCTTGTGTCGGTCATGGATGTCACTGAGTTGAGCCACTGTGACATAATAAGGCGGTGACTTAAAACTGTCAT
CTTCCTGAGAAGTGGGAGGGCGGTGACTCCTACTCGTGGCTAGAATTTCCTCCTTTTAATACGTCCATATATATACATGT
TAAATTGTTAATGTCAATAATCTCACGCTTGCAATGAATCAGTATATAATTGCATATATCATGAATAGTCTAGAGGTTTG
GAGGGGTTCTAGAATAATCTGTTTCCTCGGAGAAAAGGAGAAACCTCTAGACTATTCGTGTTTTGGAGGTTGGTTGGGCA
CAATAAGTCTCAATCTCAATCTCAACCTTATATTCCAAATCGGATAGTATATATAGCTCGAAGGCAGACACACCATCATC
ACCAACTCGTATTTTTATAGGAGTAAAGAAAACACCTCGAATTCTGAAACTCACGCATTCATTTAGCATAAAGTTTCAAA
ATATTCTCAAGCAAAAGATCGTAAAAAGGCCACCACAA------CATCATCACGTGACAATCTATAAACAAAGTGGAG--
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--------------TATTTTTTGAAGGAAATGC--GGAGAGAATTGTAAGGTGGACTGATGACTCCATCGGCTGCCGTAT
CCAAATCTGCTTTCGC-TTTGACTGAAACTGATTGCCATGTG--CCC----ATGCCCATGCTGGTGAGATACCC-CGACA
AACATATCTGCAAGCCGCTC-GCCGCTCACCGGCGGCGGCATAGCCAGTCGAACTCTTGCCTGAGGTGAAATCGGATGGA
GGGGAGCAGCAGCGGCAAG---CACTTCATGCTCGTCCACGGCCTCGGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTCCGCGCCGCGGGGCACCGGGTCACCGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCGCGCATGGACGAG
GTGCCGTCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCCGCGGCACCGGCCGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACATCGCGCTCGCCATGGAGAGGTTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTGG
CCGCGTGCATGCCGTGCGTCGGCAGGCACATGGGCGTCACCACGGAGGAGGTGGGTAATTACTCCGTGCTA---------
----------------------GTAAATTTTACACAC-------------------------------------------
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-----------------------------------------------CTCAGAAGTCAGAGGAGCTGCGATCG-------
--------ATCATGACGACGACTCTGATTT-CCATCGATTCTCG---CTAGATCATGAGACGGATCAAGCCCGATTTCTT
CATGGACATGAAGAGGATGGTTCTGAACACGAGCCAGGGCCCTCGACCTGCACTCGTGTTTGGCCCAAAATTACTGGCAG
CAAAACTGTACGATCGAAGCTCAGCTGAGGTAATAGCAGGAGTCCATTCTTTCCCGTCAC-AAATGTTATT---------
------------------------------TACGATGCTGACAGTGCTTTTACGTACG----GCATGCAGGATCAGACGC
TGGCTACGATGCTGGTGAGACCGGGCTGCCAGTTCTTGGATGACCCGACGATGAAGGACGAGGCTATGCTCACCGACGCC
AACTACGGGTCGGTGAACAAGGTGTACGTGGTGGCGATGGCTGACGCTTCAAACTCCGAGGAGATGCAGCGCTGGATGGT
CGACC---TGAGCCCCGGCACGGTGGCCGAAGAGATCGCCGGAGCCGACCACATGGCCATGTGCTCCAAACCCAGGGAGC
TCTGTGGTGTCCTGCTCCGGATCGCCGACAA------GTATGAATGAATTGATTGTCCACACCGTTGAGACTTGTACAAC
GTAATATCTTCCCATGAATTTCTCGTTCGCTGAGAGTTGAGTTCGTTGTCACCGTTTAAGAAAAACTTTCCTGTTTGTTC
CTACTCGGTCCCATAATTTAAGATATTTTTTGACTCTATCCTAATATCAAAAAAACGTCTTATAATATGGAATGGAGGGA
GCACTTCTTTTGTTAGTAGGCGTTGCATTGTGGTTGTGCACTTCCGGCCGCAAGGTTTGCGTAAACAGCCATTCGCCGTG
CTTTATCTATAAAGGCCTGCGTTACAGAACCGGATCCTCTAACATTGAGAAGGAATCTACAGTATCCTAACTTTTCTTCT
TTCTATTCATATGATTATGGCTAAAATGATATCAATTAATTTGCAAATTGATGATCTACCGTGTATATTTATAGTAATTA
CATGCAAACAAATTGATGGTAAAATAAAATTAAATTTAAATTATTTATATCTATAGTAAATACCAACACTAAACAACCTA
TTAACTATCTACTAACATCCCTAACTTTCCTTCTTCATTTTACACTAGGCTAACACTGTAGCACCGTGACATTCCTTCTC
AATGTTAGAGGATCCGGTTCCCTGCGTTATATGCAGACCGGATTCAAAAGCTGTGTCGACAGAGAACATTTCTTCATCTC
TGTTGGATTTCTGCCAGTCGATCCCCTGTCGCGATCCTTGCAAGGCTCGGTTTCATCCTACACATCTTAACGGGTCAGCA
ATTTGTTTCCAACACATGCAAAAAGAAATGGAATTTGAAAAGGGCAGGGGCTTTGTCTCGCTTATGGCGAGATGATAGAA
CCCCTTGACATAGGAGGGAGGGCTTGGTCCTAGCGCACGTTTTTGGGTTTATTACTTTTATTTTTATTTCTGAAATGGAT
ACGTAATTTATTTAAATCTTAAAAAGGTTAACTACTCATTTATAAAATGTCCATGCAATGTAAAAAAATGTCCATAGCAT
TAGAAAA
>chr3A_8
-------AAACTTGTATTACTCATATAAATCATAATCAGAATAAGGCTAGTGATTGTTTGGCTAGTTTTGGTAGAACTGA
AGGCAAAACCATGACGTGGATCGGTTCAGGCCCTTCTATGGTCATTGACTTGGTGATTGAGGATTGTAAGGACCATTGTG
AGTAAGCAATCCATTTTTTTACACGC--AAAAAAATGTTTGTGTTTATGTGGTTGTGTCAGTGATTCAATCTTGATTCAA
CGGACTAAGACAAATCGTTTGCTTCCATTTTGAGAA--------------------------------------------
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------------------------------------------------------------------------GATCGGCA
AAGGAAGTCCCACTTTCATATTTGTTGCACTTGGATT-------------------------------------------
---------------------------GAAAACACCTCGAATTCTGAA-CTCACGTGTTCGCTTAGCATAAAGTTTCAAA
ATATTCTCAAGCAAAAGATCGTAAAAAGGCCACCACAA------CATCATCATGTGCCAATCTATAAACAAAGTGGAGTA
TTTTCTTTACAAAAAAATTTCTGATCTATTCATCTTCAATCATGACAGTACAACGAACATTAGAAATAATAAAAATTACA
TCCAGTTCCGTAGACCGCCTAGCGACGACTGTAAGCACTGAAGTGAGCCGAAGACGCGCCGCCGTCATCGCCCCTCCATC
ACCCGAGTCGGGCACAACTTGTTGTAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGACCAGCGCACCAGAACAACAATTG
TTGTCGATGAAGAATAACATAGATCGAAAGGATCCAAATCGAAGACACATGAATGTAGACGAACAACGACGAGATCCGAG
CAAATTCACCAAGGACAAATCCGCCAGACATACACCTTCACACGTTCACCAACAATGCTAGACGCACCATAAGAACGGGG
CTAGGCAAGCAGAGTATTTTTTGAAGGAAATGC--GGACAGAATTGTAAGGTGGACTGATGACTCCATCAGCTGCCGTAT
CCAAATCTGCTTTCGCTTTTGACTGAAACTGATTGCCATGTG--CCC----AT------GCTGGTGAGATACCCTCGGCA
AAGATATCTGCAAG--------CCGCTCGCCGGCGGCGGCATAGCCAGTCGAACTCTTGCCGGAGGTGAAACCCGATGGA
GGGGAGCAGCAGCGGCAAG---CACTTCATGCTCGTCCACGGCCTCTGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTCCGCGCCGCCGGGCACCGGGTCACCGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCCCGCATGGACGAG
GTGGCGTCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCCGCGGCGCCGGCCGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACATCGCGCTCGCCATGGAGAGGTTCCCGTGCAAGGTCGCCGCGGCCGTGTTCCTGG
CCGCGTGCATGCCGTGCGTCGGCAGTCACATGGGTGTCACCACGGAGGAGGTGAGTAATTACTCCGTGCTA---------
----------------------GTAAATTTTACACAC-------------------------------------------
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-----------------------------------------------CTCAGAAGTCAGAGGAGCTGCGATCG-------
--------ACCATGGTGACCATGCTGATTT-CCTGCGATTCTCG---CTAGATCATGAGACGGATCAAGCCGGATTTCTT
CATGGACATGAAGAGGATGGCTCTGAACACGAGCCAGGGCCCTCGACCTGCACTCGTGTTTGGCCCGAAATTATTGGCAG
CAAAACTGTACGACAAGAGCTCAGCTGAGGTAATAGCAGGAATCCATTCCTTCCCGTCAC-AAATGTTATT---------
------------------------------TACGACGCTGACAATGGTTTTACGTACG----GCATGCAGGATCAGACGC
TGGCTACGATGCTGGTGAGACCGGGGTGCCAGTTCCTAGATGACCCCACGATGAAGGACGAGGCGCTGCTCACCGACGCC
AACTACGGGTCGGTGAAGAAGGTGTACGTGGTGGCCATGGCCGACGCCTCAAACTCCGAGGCGATGCAGCGCTGGATGGT
CGACGACTTGAACCCCGGCACGGAGGCCGAGGAGATCGCCGGAGCTCTGTGGTGTCC----TGCTCCGAACCCAGGGAGC
TCTGTGGTGCCCTGCTCCGGATCGCCGACAA------GTATGAATGAATCGATTGTCCACACAGTTGAGACTTGTACAAC
GTAATATCTTC---------------------------------------------------------------------
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>chr3B_666
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---------------------------GAAAGCACTTCGAATTCTGAAAATCGCATGTGCACTTAGCATAAAGTTTCAAA
ATAATCTTCAGCAAAAGATCGTAAAAAGGCCACCACATCAACACCATCATCATGTGTCAATCTGTAAACAAAATAT----
TTCT----------------------------------------------------------------------------
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--------------------TTAAAGGAAATATAAGGACAGAATTGTAAGGTGGACTTATGACTCCAAC-GCTGCCGTAT
CCAACTCTGCTTTCGCTTTTACTGAAAACTTATTGCCATGTGCGCCC----AT------GCTGGCGAGGTACCCTCGGCA
AAGATATCTGCAAGAGCAGGAGCCGCTCGCCGCCGGTAGCATAGCCAGTCGATCTCTTGCCGGAGGTGAAATCCGATGGA
GGGGAGCAGCAGCGGCAAG---CACTTCATCCTCATCCACGGCCTCTGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTCCGCGCCGCGGGGCACCGCGTCACCGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCGCGCATGGACGAG
GTGCCGTCCTTCGAGGACTACTCTTGGCCGCTGCTCGACGCGGTGGCCGCGGCACCGGCGGGCGAGAGGCTAGTCCTGGT
CGGGCACAGCCTCGGGGGGCTCAACATCGCGCTCGCCATGGAGAGGTTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTGG
CCGCGTGCATGCCGTGCGTCGGCAGGCACATGGGCGCCACCACGGAGGAGGTGAGTAATTGTCCCGCGTTA---------
----------------------GCAAATTTTACACAG-------------------------------------------
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-----------------------------------------------CTCAGAAGTCAGAGGAGGTTCATCGTAATCGAC
CGATCATCATCATGGTGACCACGCTGATTT-CCCGCGATTCTCG---CTAGATCATGAGACGGATCAAGCCGGATTTCTT
CATGGACATGAAGAGGATGGTTCTGAACACGAGCCAGGGCCCTCGACCTGCACTCGTGTTTGGTCCAAAAATATTGGCAG
CAAAGCTGTACGATCGAAGCTCAGGTGAGGTAATAGCAAGAGTGCATTCTTTCCCGTCACAAAATGTTAAT---------
------------------------------TACGACGCTGACAGTGGTTTTACGTACG----GCATGCAGGATCAGACGC
TGGCTACGATGCTGGTGAGACCGGGCTGCCAGTTCTTGGATGACCCTACCATGAAGGACGAGGCTCTGCTCACCGAAGCC
AAGTACGGGTCGGTGAAGAAGGTGTACGTGGTGGCCATGGCCGACGCATCAAACTCCGAGGAGATGCAGCGTTGGATGGT
CGACA---TGAGCCCCGGCACGGAGGCCGAGGAGATCGCCGGAGCGGATCACATGGCCATGTGCTCCAAACCCAGGGAGC
TCTGTGATGTCCTGCTCCGGATAGCCGACAA------GTATGAATGAATTGATTGTCCACACAGTT-AGACTTGTACTCC
GTAATATCTTCCCATGAATTTCTCGTTCGCTGAGAGTTAAGTTTGTTGTTACCTTTTTTAAAAAAACTTT----------
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>chr3B_666
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---------------------------GAAAACACCTCGAATTCTGAAACTCGCGTGTTCATTTAGCATAAAGTTTCAAA
ATATTCTCAAGCAAAAGATCGTAAAAAGGCCACCACAA------CATCATCACGTGCCAATCTATAAACTAAGTGGAGTA
TTTT----------------------------------------------------------------------------
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--------------------TTGAAGGAAATGC--GGACAGAATTGTAAGGTGGACTGATGACTCCATCGGCTTCCGTAT
CCAAATCTGCTTTCGCTTTGACTGAAAACTGATTGCCATGTGCATGGGCTGAT------GCTGGTTAGATACCCTCGGCA
AAGATATCTGCC--------AGCCGCTCGCCGCCGGCGGCATAGCCAGTTGAACTCTTGCCTGAGGTGAAACCCGATGGA
GGGGAGCAGCAGCGGCAAG---CACTTCATCCTCGTCCACGGCCTCTGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTCCGCGCCGCCGGGCACCGCGTCACCGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCGCGCATGGACGAG
GTGCCATCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCCGCGGCACCGGCCGGCGAGAGGCTCGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACATCGCGCTCGCCATGGAGACGTTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTGG
CCGCGTGCATGCCGTGCGTCGGCAGGCACATGGGCGCCACCA--------------------------------------
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-------------------------------------------------------------------AAATTGTTGGCAG
CAAAGCTGTACGATCGAAGCTCAGCTGAGGTAATAGCAGGAACCCATTCTTTCCCGTCACAAAATGTTATT---------
------------------------------TACGATGCTGACAATGGTTTTACGTACG----GCATGCAGGATCATACGC
TGGCTACGATGCTGGTGAGACCGGGCTGCCAGTTCTTGGATGACCCGACGATGAAGGACGAGGTTCTGCTCACTGACGCC
AACTACGGGTCGGTGAACAAGGTGTACGTGGTGGCCATGGCTGACGCTTCAAACTCCGAGGAGATGCAGCACTGGATGGT
CGACC---TGAACCCCGGCACGGAGGCCGAGGAGATCGCCGGAGCCGACCACATGGCCATGTGCTCCAAACCCAGGGAGC
TCTGTGGTGTCCTGCTCCGGATCGCCGACACCGACACGTATGAATGAATTGATTGCCCACACCGTTGAGACTTGTACAAC
GTAATATCTTCCCATGATTTTCTCGTTCGCTGAGAGTTAAGTTCGTTGTTACCTTTTAAGAAAAACTTTGTTGTT-----
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>chr3D_986
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------------------------------------------------------------CTGAGGTGAGATCCGATGGA
GGGGAGCGGCGGCGGCAAG---CACTTCATCCTCGTCCACGGCCTCTGCCACGGCGCGTGGTGCTGGTACAAGCTGGCGC
CGATGCTCCGCGCCGCGGGGCACCGGGTCACCGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCGCGCATGGACGAG
GTGCCGTCCTTCGAGGACTACTCGCAGCCGCTGCTCGACGCCCTGGCCGCGGCACCGCCCGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACCTCGCGCTCGCCATGGAGAGATTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTCG
CCGCGTGCATGGCGTGCGCCGGCAGGCACATGGGCGTCACCATCGAGGAGGTAGGCAGACCCTCCCAG-AATCAAGCTTA
AGGCCCTCGATGAGCTCACATGGCCATTTTTCCAGAG-------------------------------------------
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-----------------------------------------------CTCAGATGTGAACAATCA---------------
--------------------TGGCTAATTT-CTCGTGACTGTTGTGC-TAGTTCTCCAGAAGAACCCGATCTGATTTTTT
CATGGATAGCAAGAGCATGGTTCTGAACGCTGATCAAGGTGCTCGGCCTGCAGTCGCGCTTGGCCCCAAATTGTTGGCAG
CGAAATTGTACGATCGAAGCTCAGTCGAGGTA---TAC-CAACATAACAAAGAAAATCTCATCTCTGC--TTTTGATG-T
GAACTAACCAACAAACGTTTCTAGTAGTACTATCATACTCACAACATGG---------------ACGCAGGACCTGATGC
TGGCTACGTTGCTGGTGAGACCAGGCTGCCAGTTCGTGGACGACCCGACGATGAGGGACGAGGCTCTGCTCACCGACGCC
AACTACGGGTCGGTGAAGAAGGTGTACGTGGTGCTCAAGGACGATGCTTCCACCTCCGAGGAGATGCAGCGCTGGATGGT
CGACC---TGAGCCCTGGCACAGAAGCCGAGGAGCTCGCCGGAGCCGACCACATGGCCATGTGCTCAAAGCCCAGGGAAC
TCTGCGATGTTCTTCTCAGGATTGCCGACAA------GTATGACTGAGAA------------------------------
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------------------------------TGGTTGTGCACA--------------------------------------
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>chr3B_986
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------------------------------------------------------------CTGAGGTGAGATCCTATGGA
GGGGAGCGGCGGCGGCAAG---CACTTCATCCTCGTCCACGGCCTCTGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTCCGCGCCGCCGGGCACCGTGTTACGGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCGCGCATGGACGAG
GTGGCGTCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCCGCGGCACCGGCTGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACCTCGCGCTCGCCATGGAGGGATTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTCG
CCGCGTGCATGGCGTGCGCCGGCAGGCACATGGGCGTCACCATCGAGGAGGTAGGCAGACCCTCCCAG-AATCAAGCTTA
AGGCCCTCGATGAGCTCACATGGCCATTTTTCCAGAG-------------------------------------------
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-----------------------------------------------CTCAGATGTGAACAATCA---------------
--------------------TGGCTAATTTTCTCGCGACTGTTG---ATAGTTCTGCAGAAGAACCCCAGCCGATTTTTT
CATGGACAGCAAGAGCATGGTTCTGAACACAGACCAAGGCCCTCGGCCTGCAGTCGCGCTTGGCCCCAAATTGTTGGCAG
CGAAATTGTACGATCGAAGCTCAGTCGAGGTAA---CATCAACATAACAAAGAAAATAATTGCTTTTGAGTTTTGATG-T
CAACCAACCAACAGCCTTAC----TAGTACTATCATACTCGCAACATGG---------------ACGCAGGACCTGACGC
TGGCTATGTTGCTGGTGAGACCGGGCTGCCAGTTCGTGGACGACCCGACGATGAGGGACGAGGCTCTACTCACAGACGCC
AACTACGGGTCGGTGAAGAAGGTGTACGTGGTGCTCAAGGACGATGCTTCCACCTCCGAGGAGATGCAGCGCTGGATGGT
CGACC---TGAGCCCCGGCACAGAAGCCGAGGAGCTCGCCGGAGCCGACCACATGGCCATGTGCTCAAAGCCCAGGGAAC
TCGGCGATGTTCTTCTCAGGATTGCCGACAA------GTATGACTGAGAA------------------------------
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------------------------------TGGTTGTGCACA--------------------------------------
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>chr3B_986
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------------------------------------------------------------CTGAGGTGAGATCCGATGGA
GGGGAGCGGCGGCGGCAAG---CACTTCATCCTCGTCCACGGCCTCTGCCACGGCGCGTGGTGCTGGTAGAAGCTGGCGC
CGATGCT--GCGCCGCGGGGCACCGGGTCACGGCGCTCGACATGGCCGCGTCCGGCGCGCACCCGGCATGGATGGACGAG
GTGCCGTCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCGGCGGCACCCGCCGGCGACAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACCTCGCGCTCGCCATGGAGAGGTTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTCG
CCGCGTGCATGGCTTGCGTCGGCAGGTACATGGGCGTCACCATCGAGGAGGTAGGCAGACCCTCCCAG-AATCAAGCTTA
AGGCCCTCGATGAGCTCACATGGCCATTTTTCCGGAGCTCAGATGTTTTTTTTTCTTTTTTCCGAAAAGGGGTTTTACCC
CATCCTCTGCATCAGAAAGATTCATACGGCTCATATTATTAAAAATAATCCAGTAATAAAGTCTCCAAGTCTCAAAGTAA
GAAATAAAACAAAACGCTCAAAAGAGCCAGATCGAAAGCCACAACCGGCTGGCAAATAAAATAGAAGCACTACATGCCTA
TCCTATTACATGACCGCCATCCAAATCGGTTAAAAATAACCCGAGCTATCATCTCCCATCGAGTAGACGCAGTAGCCAAA
CGCCCCCTGGCCTCCGTCGGAGTGAGTAGCAACCACATACGGATCAATGTTGTGGCCCTGAAGATAACCTGCAAAAAGTG
AATGTTCGATGTTCTGTTAAAAACCAAATCATTTCTGCAGTTCCATACTGCCCATAATAATGCACAAACTCCAACACGAA
TGTGCCTCGCTATATCCGAGTCAACCCCATCAAGCCACTTTCCAAATAACATGTTGATGGAGGAAGGCGGAGTAATATTA
AAAGCAATATGAATCAAACGCCAAAGAATCTTAGCCAGCGGACAATCCAGAAAGAGGTGTCTGATAGTTTTGTTATGATC
ACAAAAACTACACCTAGCAGAACCCACCCAATTGCGTTTTGCCAGATTATTCTTTGTCAAGATGACTTATTTATGTACGA
ACCACGTAAACACTTTGATTCGTAAATGCACCTTTACTTTCCAGATATGCTTCGAAGAGGTAATGACACTAGAGTTTATG
ACATCTAGGTACATAGATTTGACTGAAAACACACCGTCCTTAGTCAGTTTCCAATACAACCTATCTGGCTGTTGAGACAA
CTGGACATCCATCAACCTTCTTACAGATGAAGCCAAGCCTCCCAATGATCACCAACTAGTGTCCTCCGAAAACTAATATT
GAGGGGCGTGGACTGTAAAACGTTTGCAACGTAAGCCTCTCGTCGTTGAACAACGTTGTACAGAGTAGGATATTGAAGTG
CGAGGGACGTCTTCCCAAGCCACGTATCCTCCCAGAACCTCGTATTAGCTCCATTGCCTACTAAGAACCTTGCCGTGTTG
AAAAAGAGTGTCTTGAATCTCATCAACCCTTTTCAAAATGGCGAGTCAGTCGGTCGCAAAGTCACCTGTGCCAATGTTTT
GGACTGAAGATACTTATTGCGCAAAATCTGAGCCCAAGTAGCCACAGACTCGGACAAAAGTTTAAATAGCCACTTGCTGA
GGAGACATCTATTCTTGACATCTAGATTTTCAATGCCTAGACCCCCTTGGTCCTTCGCCTACAGATGATGTCCCATTTTG
CAAGCCTATACTTTCGTTTAAGCTCATCAATCTACTAAAAGAATCGAGATCGATAAAAGTCTAATCTCTCCCTGACCCCC
ACCGGGACCTCAAAAAAGGATAGAAGAAACATACGCATACTGGTAAGGACCGAATTAATCAGAATTAAACGCCCTCCATA
TGACATGAGCTTCCCTTTCCAACAGCTCAGTTTCTTTTCAAAATGATCTTCAATGCACTTCCACTCCTTGTTAGTCAGCT
TATGATGATGAATGGGTATACCTAAGTACGTGAACGGTAACGAACCCAACTCACATCCGAACAATTGCTTATACGCCTCC
TGGTCATCATTAGCTCTTCCAAAGCAGAACAATTCGCTCTTATGGAAGTTAATTTTGAGTCCGGACAATTGTTCAAATAA
GCATAACACAAGCTTCATGTTTCTCGCTTTCGCCAAGTCATGCTCCGTAAAGATGATAGTATCATCAGCATACTGTAGTA
TGGAAATACCGCCATCAACTAGGTGCGGAACCAAGCCACTTATCTGCCTCGCATCCTTAGCCCGTCCTATTAAGATAGAT
AGCATATCAACCACTATGTTGAATAGAATCGGAGACATGGGATCTCCTTGCCTTAATCCTTTGTGTGTCTAGAAATAGTG
ACCTATATCATCATTCACTTTAATCCCTACACTCCCTTTTTGCATAAAGGACTCGATCTGGTCTCGTCAGGCCGTGTCAA
AACCTTTCATACGCAAAGCTTGTTGAAGGAAAAGTCATTTAACTTTATCGTATGCTTTTTCGAAATTCACTTTAAAAACC
ACACCATCTAGTTTTTTTGAGTGGATCTCATGGAGCGTTTCATGCAAGACGACCACCCCTTCAAGGATATTTCTATCTGG
CATGAAAGCAGTCTGGGACGGTTGCACAACTGAATGCGCAATCTGCATAAGTCTGTTCGTCCCAACCTTGGTGAAGATTT
TGAAACTGACATTAAGCAGACAAATGGACCTAAACTGCTCAATGCGAATAGCCTCTGTCTTCTTCTTAGGAAAAAGAGTT
ATCGTTCCAAAATTGAGCTTGAACAACTGAAGCTGCCCAATGAAAAACTCAGATGTGAACAATCA---------------
--------------------TGGCTAATTT-CTCGCGACTGTTG---ATAGTTCTCAAGAAGAACCACATCCGGTTTTTT
CATGGACAGCAAGATCATGGTTCTCAACACAGATCAAGGCCCTCGGCCTGCAGTCGCGCTTGGCCCCAAATTGTTGGCAG
CGAAATTGTACGATCGAAGCTCAGTCGAGGTAA---CATCAACATAACAAAGAAAATAACTGCTTTTGAGTTTTGATG-T
CAACCAACCAACAACCTTTC----TAGTACTATCATGCTCGCAACATGG---------------ACGCAGGACCTGACAC
TGGCTATGTTGTTGGTGAGACCGGGCTGCCAGTTCGTGGACGACCCGATGATGAGGGACGAGGCTCTGCTCATCGACGCC
AACTACGGGTCGGTGAAGAAGGTGTACGTTGTGCTCACGGACGACGTTTCCACCTCCGAGGAGATGCAGTGCTGGATGGT
CGACC---TGAGCCCGGGCACGGAGGCCGAGGTGCTCGCCGGAGCCGACCACATGGCCATGTGCTCCAAGCCCAGGGAAC
TCTGTGATGCTCTGCTCAGGATCGCCAACAG------GTATGACTGAGAA------------------------------
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------------------------------TGGTTGTGCACA--------------------------------------
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>chr3A_986
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------------------------------------------------------------CTGAGGTGAAATCCGATGGA
GGGGAGCGGCGGCGGCAGG---CACTTCATCCTCGTCCACGGCCTCTGCCACGGCGCGTGGTGCTGGTAAAAGCTGGTGC
CGATGCTACGCGCCGCGGGGTACCGCGTCACCGCGCTCGACATGGCCGCGTCCGGCGCGCACCCAGCCCGCATGGACGAG
GTGGCGTCCTTCGAGGACTACACGCGGCCGTTGCTCGAAGCCGTGGCCGCGGCACCGGCTGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACCTCGCGCTCGCCATGGAGAGATTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTCG
CCGCGTGCATGGCCTGCACCGGCAGGCACATGGGCGTCACCATCGAGGAGGTAGGCAAACACCTCTTAAAATCAAGCTTA
AGGCCCTCGATGAGCTCACATGGCCATTTTTTCAGAG-------------------------------------------
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-----------------------------------------------CTCAGATCTGAACAATCA---------------
--------------------TGGCTAATTT-CTCGCGACTGTTG---ATAGTTCTCCAGAAGAACCACATCCGATTTTTT
CATGGACAGCAAGAGCATGATTCTGGACACAGATCAAGGCCCTCGGCCTGCAGTCGCGCTTGGCCCCAAATTGTTGGCAG
CGAAATTGTACGATCAAAGCTCAGTCGAGGTAATATAC-CAACATAACAAAGAAAATCTTTGCTATTGATGTGAACTATT
GAACCAACAAACAACCATTC----TAGTACCATCATACTCAAAACATGG---------------ACGCAGGACCTGACGC
TGGCTAAGTTGCTGGTGAGACCGGGCTGCCAGTTCGTGGACGACCCGGTGATGAGGGACGAGGCTCTGCTCACCGACGCA
AACTACGGGTCGGTGAAGAAGGTGTACGTGGCACTCAAGGACGATGCTTCCACCTCCGAGGAGATGCAGCGCTGGATGGT
CGAAC---TGAGCCCTGGCACAGAAGCCGAGGAGCTCGCCGGAGCCGACCACATGGCTATGTGCTCCAAGCCCAGGGAAC
TCTGTGATCTTCTGCTCAGGATCGCCAACAA------GTACGACTGAGAA------------------------------
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------------------------------TGGTTGTGCACA--------------------------------------
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>chr3B_988
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--------------------------------------------------------------GAGGTGAGATCCGATGGA
GGGGAGCGGCGGCGAC------CACTTCATCCTCGTCCACGGCCTCGGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTGCGCGCCGCGGGGCACCGCGTCACCGCGCTGGACATGGCGGCGTCGGGCGTGCACCCGGCGCGCATGGACGAG
GTGCCGTCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCCGCGGCGCCGGCCGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACATCGCGCTCGCCATGGAGAGGCTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTCG
ACGCGTGCATGCCGTGCGTCGGCCGGCACATGGGCGTCACCATGGAGGAGGTAAGCAAACCTCAAG--------------
--------------------------TTTTTTCATGGACAG---------------------------------------
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---------CAATCGATACCTGGCTAATCT-CTGGTGACTCCTCTTCCCAGTTCTCCAGAAGAACCACGCCGGATTTTTT
CATGGACAGCGAGAGGATGGTTCTGGAGACGAGCGAGGGCCCTCGAGCTGCACTCGTGTTTGGCCCCAAATTGTTGGCAG
CAAAACTGTACGGTCGAAGCCCAGTTGAGGTAA---CAAGAAGACAACCCTTTTTGTCCA-AGATGTTCAAGC-------
-------------------C----TTGTACTACGATGCTGACACTGGTTTTCTGGCCGGCACGCACGCAGGACCTGACGC
TGGCCACGATGCTGGTGAGGCCCGGCCGCCAGTTCGGGGACGACGCGATGGTGAAGGACGAGACGCTGCTCACCGACGCC
AACTACGGGTCGGTGAAGAAGGTGTACGTGGTGGCCATGGAGGACGTTGCTTTCTCCGAGGACATGCAGCGCTGGATGGT
CGACC---TGAGCCCCGGCACGGAGGCCGTGGAGATCGCCGGAGCCGACCACATGGCCATGTTCTCCAAGCCCAGGGAGC
TCTGCGATGTTCTGCTCGGGATCGCCAGCAA------GCATGACTGA---------------------------------
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>chr3A_988
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--------------------------------------------------------------GAGGTGAAATCCGATGGA
GGGGAGCGGCGGCGGCGGCGATCACTTCATCCTCGTCCACGGCCTAGGCCACGGCGCGTGGTGCTGGTACAAGCTGGTGC
CGATGCTGCGCGCCGCGGGGCACCGTGTCACCGCGCTGGACATGGCGGCGTCGGGCGTGCACCCGGCGGGCATGGACGAG
GTGGCGTCCTTCGAGGACTACTCGCGGCCGCTGCTCGACGCCGTGGCCGCGGCGCCCGCCGGCGAGAGGCTGGTCCTGGT
CGGGCACAGCCTCGGCGGGCTCAACATCGCGCTCGCCATGGAGAGGCTCCCGCGCAAGGTCGCCGCGGCCGTGTTCCTCG
ACGCGTGCATGCCGTGCGTCGGCAGGCACATGGGCGTCACCATGGAAGAGGTAAGCAAACCTCAAG--------------
--------------------------TTTTC-CATTGACAC---------------------------------------
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---------CGATCGATACTTGGCTAATTT-CTGGTGACTCTTG---CCAGTTCTCCAGAAGAACCACGCCGGAATTTTT
CATGGACAGCGAGAGGATGGTTCTGGAGACGAGTCAGGGCCCTCGACCTGCTCTCGTGTTCGGCCCCAAATTATTGGCAG
CAAAACTGTACGATCGAAGCCCAGCTGAGGTAA---CAAGAACTCAATCTTTTTCGTCCC-AGATGTTCTAGTCCTCGAT
GCTGACATGGGTTTTACCTACGGCATACAA---GATGCTGACATTGGTTTTGTGGCCG----GCACGCAGGATCTGACGC
TGGCTACGATGCTGGTGAGACCCGGCCGCCTGTTCGTGGACGACGCGATGGTAAAGGACGAGACGCTGCTCACGGACGCC
AACTACGCGTCGGTGAAGAAGGTGTACGTGGTGGCCATGGAGGACGCTTCCTTCTCCGAGGAGATGCAGCGCTGGATGGT
GGACC---TCAGCCCCGGCACGGAGGCCGAGGAGATCGCCGGAGCCGACCACATGGCCATGTTCTCCAAGACCAGGGAGC
TCTGCGATGTTCTGCTCAGGATCGCCGGCAAA-----GCATGACTGA---------------------------------
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>SNPs
SSSSSSS--------------S--S------S--S-S--------------------S--S--------S----------
-----S------SS-------------------------------SS---------------------------------
----------S--S------SSS-SSSS---S---S---------------S---S-SSSSSS-SS--SSSSSSS-SS-S
-SSS--SSSSSSSSSSSSS-SS-SSSSS-SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S-S----
S-SS-----S--S-S---SSS-SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------SS-----------------------
--------------------------------------------------------S-----------------------
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--------------------------------------S-----------------------------------------
-----------------------------------------------------SSSSSS------------------S--
--S-----------SSSSSS--------S--------------------------------------------S------
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--------------SS---S--S----------SS---------------------------------------------
-------------------------------------------------------------------------S------
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----------------------------------------------S---------------------------------
-----------------------------------------------------------------S--------------
-----------------------------------S--------------------------------------------
-----------------------S------S-------------------------------------------------
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--------------------------------------S----------S---S---------------SS----SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS
>forward_636
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--------------------------------------------------------CTCGAAGGCAGACACACCAT----
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>reverse_5488
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-----------------------------------------------GGCTAACACTGTAGCACCGT-------------
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-------
