>input_sequence_64000
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----------------------------------AACTACGCTTCTTCTACCTGCGGTGAAGGAGAACCAACTACCAGCT
GATCA--AAGCCATGGCCATGAGGGCGCTCGCGCTGTCCCCGGCCCAGAGCTCCTCGTTTGGGCTCCACCAGAGCATGCC
CTCCTTCAAGCCAGGCAGCGCCAGTCCTGCTAGATCAGTTAGGGCCTATGCGAAAGCAGATGAGCAGGAGGAGGAGAAGA
AGAAGGTGCCCAAGCAGTCCTTGTTTGGGAACATCACCGAGGCGCTGGACTTCTCGCAGGTCCGGTCGGAGAAGGACGCG
GAGCTGCTGTATGAGGCCAGGGATTCCATCAAAGATGAAGGAAGGATGACAAGGGAACAGGTACATATAATCGATCACAA
AATGCAC-------AA-CAATTTTGAACAATTTTTATAGTGAAACCTGCAAGTTTTCCTTATGCTGATGAACTTCTGGTT
GGTGTTTC-AATTCAGTATGCAGCCCTTCGGAGGAAGATTGGTGGCACCTACAAGGATTTCTTCAAGTCATATGTTGAAG
GTACCCTGTCCATACCCTCAGTCACAGATACAGAGATAACCTCATGTTTTGTCTACTCTTGATTTCTCAGGTAGTGCAAT
ATTTGTACACCACTGCTAGGCATAATAAACTGCCAGGATTAATATGACCTCATGTTGTATAAGAATATTTTGTCTCACAC
GATTTC--TTCTACCCGTCCTTCCTCTGAGCAAACAACATACAATAAATCATGTTACTGAATGCTGACCAAATAATTTGT
TTCTGAAAATACAGTTGACGGCGAATACGTGGAGGAAGGTTGGGTGGACAAGACCTGCAAAGTTTGCAAGAAAGACACAA
GAGGGGAGCCAAGGCAAGTTGACAATCTAGGAAGATATATGCATGTGGCGTGCGCAGAGAACTCGAAACCAACAAACTTC
TTTTCCAAACTCTTCGGCAGATGAACTTCTTTTGTACCATCAGACCC--------ACTCATGGTTAGATAAA--------
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>chr3A_1_TraesCS3A01G345200
GCAACATATGACCCATGTTGTCCCTTTGCAACACTATCATCGGTGTAGTCGTCGTTGTGCAAAACCAATTCCGAGCACGG
CGACGCCTTTGCGACACCAGGTCAT-------------------------------------------------------
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--------------------------------------------------------------GGCTACTCGCACCTTGTC
CTTGCGGCGACCATGGATGCGTTAGGCGCGAGCCCTACACTACCGGTGGGTTGGGTAGCCCGCACTTCGAGTGGCCCGAC
GCCCTGCCCGCATCATCTCGACCGACGCGTGATCATAGCTGATGGTGCACAACCCATCGCCTACTTGTAGCCGTAGCAAC
GGCGATGATGGCGTGCTTGAAGCCGCGGCCCCCCAGTTTGTGGTAAGCGGCACAACATCCCCATGGGAAAGGAGCGAGGG
GGAAGGAGGGATGTTAGAGAGATAGGAGACCAGAGGATAGGGAGATCGGGGGAGAGTCACAACGTTCCAGCAAACGATAA
GGTGCACCACATACGGGCCAACGGGGCCATGTGGCAGATGCCCGAGGCGGTTGAAACGAGCGTGTAATCAGTCGATAGAA
CAAAAGCGTCTCCATGAGACTAATGCTTTCAATAATTCTCAGCAACATATTCAAAAGGGAAGTTCTTTAAAAACCCCAAA
AGCCAATTCTCAAATTTAACAATAAGATTTGTTTTCG-------------------------------------------
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------------------------------------------------------------------TCAAAAAAAAAATA
GCACACGAATAAAAGAAGCTGACATATGTTCTCACTTA------------------------------------------
--------------------------------------ACAGTGGCCTGAGTTTTAATTATTTTTCCTGAGTTTTAGTTT
CGTTCCAGGAGAAAATCCCTCCAC------AAATA-TTCCTGTCTATACAGTCATCAGCTAAACCAGCCACGCTGCCGCA
ACTCTTCCTGTCCAGTAGACACAGCGCGCAACGCCGTCCTCTCATCTGAAAACTCTGCTCTCGTTGCATCAGGCCTGGCT
TGCACCACGCAGCCCTGTTAACCGCCACAGAACTG-CCATGGCGTGCCCTTGATTCGCTTGTGTGCACACCAAATGCTTC
CACATATATAAGCAGTGGATGCGGATCACTCACCAACTACGCTTCTTCTACCTGCGGTGAAGGAGAACCAACTACCAGCT
GATCA--AAGCCATGGCCATGAGGGCGCTCGCGCTGTCCCCGGCCCAGAGCTCCTCGTTTGGGCTCCACCAGAGCATGCC
CTCCTTCAAGCCAGGCAGCGCCAGTCCTGCTAGATCAGTTAGGGCCTATGCGAAAGCAGATGAGCAGGAGGAGGAGAAGA
AGAAGGTGCCCAAGCAGTCCTTGTTTGGGAACATCACCGAGGCGCTGGACTTCTCGCAGGTCCGGTCGGAGAAGGACGCG
GAGCTGCTGTATGAGGCCAGGGATTCCATCAAAGATGAAGGAAGGATGACAAGGGAACAGGTACATATAATCGATCACAA
AATGCAC-------AA-CAATTTTGAACAATTTTTATAGTGAAACCTGCAAGTTTTCCTTATGCTGATGAACTTCTGGTT
GGTGTTTC-AATTCAGTATGCAGCCCTTCGGAGGAAGATTGGTGGCACCTACAAGGATTTCTTCAAGTCATATGTTGAAG
GTACCCTGTCCATACCCTCAGTCACAGATACAGAGATAACCTCATGTTTTGTCTACTCTTGATTTCTCAGGTAGTGCAAT
ATTTGTACACCACTGCTAGGCATAATAAACTGCCAGGATTAATATGACCTCATGTTGTATAAGAATATTTTGTCTCACAC
GATTTC--TTCTACCCGTCCTTCCTCTGAGCAAACAACATACAATAAATCATGTTACTGAATGCTGACCAAATAATTTGT
TTCTGAAAATACAGTTGACGGCGAATACGTGGAGGAAGGTTGGGTGGACAAGACCTGCAAAGTTTGCAAGAAAGACACAA
GAGGGGAGCCAAGGCAAGTTGACAATCTAGGAAGATATATGCATGTGGCGTGCGCAGAGAACTCGAAACCAACAAACTTC
TTTTCCAAACTCTTCGGCAGATGAACTTCTTTTGTACCATCAGACCC--------ACTCATGGTTAGATAAATAGATGGA
TGCTATAACATCAAGGGATTAGGACAGTAATGTGTAC------TGTGTTGTTCATGTGAAATGGTTTTTGATGAGCATTT
ATACACATTCCATTATCCAGTTTCGTTGGTATCTCAAATAGCACACGAACAGAGGCCTGATTTATGGAGAAATAGATGAA
CCACTGAAAACTATACATAATACTAGCACAATATTCTACTACAAGTTAACATTATGAGGTATTATCTACTAGATAGTGCT
CCTCAACTCCTAGGCTGAATACAGGAGAAGCTTAACAGAAACTTTGGCTGACAGACTTACTATATAGCTATTTGATTCTG
CTTACCTAATGGCTGCAATATGATGTGTTCAGAAGTCCATTGCGTTAAGCTTACACAAATAAACAATGCATCTGATGACA
GTGCACCCAATCTTAAACCCCGGCATGACCGTAAACCCAACACTGAACTTCTCCTCTTCTCCGATAACCTTGGCTGGCGT
ACTTTCCATGTGCTCCTTCCGAAACTGAACACCAGTCTTGACATAAAACATTTCAGCTCTTGGATTCAGAGCACGAGCAA
CTGCGAGTAGTGCCCATGTATACCTTGCCATCCTCACAAATTTCTGGTAAAATGGCGTCCTTGGATGGCTGCCGCCCTCG
ACAAATGCTCTGTGATCCAAGTTTCCAAAGAAGGAATCCTCCATGCTCTGGGGCACAGCCACTAGATACTTTGCTCTGCA
ATATCTCCCGAAACTAGAATCTGGATCAGTCATGAGAGCGTCAAATGGATCTTTGAAGCTCATGATACAGTCAACTGAAT
CCAGGGGTGTATGGTCATCTCTGTCTGCCATAAGCATCACGCAAGCAAAATAGGCCTCAACAGCATACTTCTTGTCAGCC
CTTCTCTCATATGCAACTTGACTGTCGATTGCAAATGTGGATAGGCCGAGGTTCCATCCGGAAACTTTTGTCCAATCAAA
GATGAATTTTGCAAAATCATGGATGCACTTCGACGAAC
>chr3D_1
GCAACATATGACCCATGTTGTCCCTTTACAACACTGTCATCGGTCCAGTTGCCATTGTGCAAAACCAATTCCGAGCACGG
CGACGCCTTTGCGACATGCTACTTCTTGAGCTTGCATTGATTTTTTCCTTGAAGAGGAAAGGATGATGCAACAAAGTAGA
GATAAGTATTTTCCTCAGTTAAGAACCAAGGTATCAACCCAGTAGGAGGCACAAGCAAGTCTTCAATATATGCACCTGCA
CAAACTAACAAACACTTGCACACAGCGTGAAATGGGGGTTGTCAATCCCTTCACGGTCACAAACAAGAGTGAGATCTAAT
AGAGATAGGTATAAAATATAAATAAAAGAGCAAACTAAAGTAAATATAAATAAATTACAACAAGGTATTTTTGGGTTTTT
TGGTTTATAGATCTGAAAATATATGATGGAAAATAGACCCAGGGGCCATAGGTTTCACTAGAGGCTTCTCTCTTGAAGAA
AACATACGGTGGGTAAACAAATTACTATTGAACAATTTATAGAAAAGCGCATAATTATGAAGACATCTAAGACAATGATC
ATGAATATAGGCATCACGTCCGTGACAAGTAGACCGAAACGATTCTGCTTCTAGTACTATTACTCCACACATTAACTGAC
TCCTGCCTGCATCTAGAGTATTAAGTTCATAAGAACGGAGCAACGCTTTAAGTAAGATGACATGATGTAGAGGGATAAAC
TCAAGCAATATGACATAAACCCCATCTTTTTATCCTTGATGGCAATAATACAATACGTGCCTCGCTACCCCTTCTGTCAC
TGGGTGAGGACACCACAAGATTGAACCCAAAACTAAGCACCTCTCCCATTGCAAGAAAAACCAATCTAGTTGGCCAAACC
AAACCGATAGTTCGAAGAGAAATACAAAGATATCTTAATCATCCATAAAAGAGTTCAGAGAAGACTCAAATAATATTCAT
AGATAATCTGATCATAAATCCACAATTCATCGGATCTCAACAAACGCACCACAAAATAAGATTACATCGAATAGATCTCC
AAGAACATCGAGAACATTGTATTGAAAATCAAAGAGAGAGAAGAAGTCATCTAGCTACTAGCTATGGACCCGTAGGTCTG
TGGTAAACTACTCACACATCATCGGTAGGGCAATAGGGTTGATGTAGAAGCCCTCCGTGATCGAATCCCCTACGGCAGAT
CGTCGGATAAGGCCCCAAGATGGGATCTCACGAGAACAGAAGCTTGCGGCGGCCGAAAAGTATGTTGATGGACGCTTCTG
TTGGTTTGGGAATATTTGGGAATTTATAGAGCAAAAATTAGGGTTGGAGGACTCCTGGGCCCCCCACAAAGCCAGGGGCT
CTTCTGACCCCCTCGGGACTCTTCTGACCCCCTCTCCAAGCTCCGTGGATGTCTTCTGGTCCAAGACAAATCATCACGAA
AGTTTTATTCCGTTTGGACTCCGTCTGATATTTCTTTTCTGTAAAAATAAAAAATAAGGAAAAAACAGAAATTGGCACCG
GGCTCTATGTTAATAGGTTAGTCCCAAAAATAATATAAGATAGCATATTAATGCATATAAAACATTCAAAACAAATAATA
TAATAGCATGAAACAATAAAAAATTATAGATACGTTGGAGACGTATCACGACACCGGCTCACGGCTACTGGCACCTTGTC
CTTGCGGCGACCATGGATGCGTTAGGCGCGAGCCCTACACCACCGGTGGGTTGGGTAGCCCGCGCTACGAGTGGCCCGAC
ACCCTGCCTGCAACATCTCAACCGGCGCGTGATCGTAGCTGACGGTGCACAACCCATCGCCTACTTGTAGCCGTAGCAAC
GGCGATGGTGGCGTGCTTGAAGTCGCGGT-CCCCAGTTTGTGGTGAGCGGCACAACATCCCCATGGGAAAGGAGCGAGGG
GGAAGGAGGGAGGTTAGAGAGATAGGAGACGAGAGGATAGGGAGATCGAGGGAGAGTCATGACGTTCCAGCAAGCGATAA
GGTGCACTACATACGGGCCAAAGGGGCCACATGGCAGATGCCCGAGGCAGTTGAAATGAGCGTGTAATCAGTCGGTAGAA
CGAAAGCGTCTCCACGAGACTAATGCTTTCAATCATTTTCAGCAACGTATTAAAAAAT-AAGTTCTTTAAAACCCCCAAA
AGCCAATTCCCGAATTTAACAATAAGATTTGTCGTTTCTCTCTTGGGAGCATCGTTTGTGGAGCAGTGCTAGAAGTCAAA
GGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGATCGACAGGTGCTACGCT
TGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGACTTCAAGCTGTGTCGGCTGGTGGTACTTGGCA
GCATGGCGCTGAGGTGTATCAGTGGCGACCGCGACGTGTTCAGCTGTTTGCGCGCAGGGAGGAGGTGCCGTTGGGCGCCA
TGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGGCAGTTGGCGG
CGGCGGCCTCTGAGAGCACGCCGGACCAGTGTGTGTCCCAGACCCGGCAAGTGGCTAGGTTGGGGTCTCGGGTCTTAGAT
GTTAGGCTTGGCTGCGATGTCTCGGGTCTTAGATGTTAGGCTTGGCTGCGATGTCTCGGGTCTTAGATGTTAGGCTTGGC
TGCGATGTCTCGGGTCTTAGATGTTAGGCTTGGCTGCGATGTCTCTTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCA
TCAACTGGATAGGTGTAGCGACAGTTTGTTGCTTAGACGGCGGCTTTAGTCTTACTGTTGTATGACTTTGTAAGGTCTTG
TGAGAATAATTAATAAAGTTGCCGTATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAAATA
GCATACGAATAAAAAAAGCTGACATACGTACCCACTTAGGGGCTGCATGCATCACTCTGATGTAGAGGCCGGAGGTAGTC
CTCTTTTTCTAAAAATAAAAAAATATATGCACTCACTTACAATGGCCTGAGTTTTAATTATTTTTCCTGACTTTTAATTT
CGTTCGTGGAGAAAATCCCTCCAC------AAATATTTCCTGTCTATACAGTCATCAACTAAACCAGCCACGCTGCCGCA
ACTCTTCCTGTCCAGTAGACAGAGCGCGCAACGCCGTCCTCTCATCCGAAAACTCTGCTCTCGTTGCATCAGGCCTGGCT
TGCACCACGCAGCCCTGTTAACCGCCACAGAACTGGCCATGGCGTGCCCTTGCTTCGCTTGTGTGCACACCAAATGTTTC
CACATATATAAGCAGTGGATGCGGATCACTCGCCACTTAAGCTCCTTCTACCTGCGGTGAAGGAGAACTCAAAAAACCCA
GCCGATCAAGCCATGGCCATGAGGGCTCTCGCGCTTTCCCCGTCCCAGAGCTCCTCATTTGGGCTCCACCAGAGTATGCC
CTCCTTCAAGCCAAGCAGCACCAGTCCTGCTAGATCAGTCAGGGCCTATGCGAAAGCGGATGAGCAGGAGGAG---AAGA
AGAAGGTGCCCAAGCAGTCCTTGTTTGGGAACATCACCGAGGCGCTGGACTTCTCGCAGGTCCGGTCGGAGAAGGATGCG
GAGCTGCTGTATGAGGCCAGGGATTCCATCAAAGATGAAGGAAGGATGACAAGGGAACAGGTATACATACATACACTGAA
CCGCCAATGGAAAAAAACAGTTTTGAACAAATGTTTATTGAAAT-CTGCAAGTTTTCCTTATGCTGATGAATTTCTGGTT
GGTATTTC-AATTCAGTATGCAGCCCTTCGGAGGAAGATTGGTGGCACCTACAAGGATTTCTTCAAGTCATATGTTGAAG
GTGCCCTGTCCATACCCTCAGTCACAGATACAGAGATAACCTCATGTTTTGTCTACTCTTGATTTCTCAGGCAGTACAAT
ATTTGTATACTAATGCTAGGCAGAATAAACTGTTAGGATTAATATGACCTCATATTGTATAAGAATATTTTGTCTCACAC
CATTTTTTTTCTACCCATCCTTCCTCTGAGCAAACAACATGCAATAAATCATGTTACTGAATGCTGACCAAATAATTTGT
TTCTGAAAATACAGTTGACGGTGAATACGTGGAGGAAGGTTGGGTGGACAAGACCTGCAAAGTTTGCAAGAAAGACACAA
GAGGGGAGCCAAGGCAAGTTGACAATCTAGGAAGATATATGCATGTGGCGTGCGCAGAGAACTCGAAACCAACAAACTTC
TTTTCCAAGCTCTTCGGCAGATGAACTTCTTTTGTACCATCAAACCCGTTGTTCGACTCATGGTTAGATAAATAGATGGA
TGCTATAACACCAAGGGATTAGGACAGTAATGTGTAC------TGTGTTGTTCATGTGAAATGGTTTTTGATGAGCATAT
ATACACATTCCATTATCCAATTTCGTTGGTATATCAAGTAGCACATGAACAGAGGCCTGATTTATGGAGAAATAGATGAA
CCACTGATAACTATACATAATACTAGCACAATATTCGACTACAAGTTAACATTATGGGGTATTATCTACTAGCAAGTGCT
CCTCAACTCCTAGGCTGAATACAGGAGAAGCTTAACAGAAACTTTGGCCGACAGACTTACCATAGATCTAATTGATTCTG
CTTACCTAATGGCTGTAATATGATGTGTTCAGAAGTCCATTGCGTTAAGCTTACCCAGATAAACCCTGCATCTGATGACA
GTGCACCCAATCTTAAACCCCGGCATGACTGTAAACCCAACACTGAACTTCTCTTCTCT---GATGATCTTGGCTGGAGT
ACTTTCCATGTGTTCCTTCCGAAACTGGACGCCACTCTTGACATAAAACATTTCAGCTTTGGGATTCAGAGAATGAGCAA
CTGCGAGTAGTGCCCATGTGTATCTTGCCATCCTCACAAATTTCTGGTAAAATGGCGTCCTTGGATGACCACCGCTCTCC
ACAAATGCTCTGTGATCCAAGTTTCCAAAGAAGGAATCCTCCATGCTCTGGGGCACAGCCACTAGATACTTTGCTCTGCA
ATATCTTCCGAAACTAGAATCTGGATCAGTCATGAGAGCATCAAAAGGATCTTTGAAGCTCATGATACAGTCAACTGAAT
CCAGGGATGTATGGTCATCTCTGTCTGCCATAAGCATCACGCAAGCAAAATAGGCCTCAACAGCATACTTCTTGTCGGCC
CTTCTCTCATATGCAACATGACTGTCGATTGGGGTTGTCGATAGGCCGAGGTTCCACCCGGAAACTTTCGTCCAATCAAA
GATGAACTTTGCAAAATCATGGATGCACTTCGACGAAC
>chr3B_740
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-----CAGGAGAAAATCCCTCCACTCCACAAAATA-TTCATGTCTATACAGTCATCAACCGAACCAGCCACGCCGCCGCA
ACTCTTCCTGTCCAGTAGACAGAGCGCGCAACGCCGTCCTCTCATCCGAAAACCCTGCTCTAGTTGCGTCAGGCCTGGCT
TGCACCACGCAGCCCTGTTAACCGCCACAGAACTG-CCATGGCGTCCCGTTGCT-------TGTGCACGCCAAATGCCTC
TACATATATAAGCACTGGATGCGGATCACTCACCAACTACGCTTCTTCTACCTACGGTGAAGGAGAACCAACAACCAGCT
GATCA--AAGCCATGGCCATGAGGGCGCTCGCGCTGTCCCCGTCCCAGAGCTCCTCATTTGGGCTCCACCAGAGCATGCC
CTCCTTCAAGCCAAGCAGCGCCAGCCCTGCTAGACCAGTCAGGGCCTATGCGAAAGCAGATGAGCAGGAGGAGGAGAAGA
AGAAGGTGCCCAAGCAGTCCTTGTTTGGGAACATCACCGAGGCGCTGGACTTCTCGCAGGTCCGGTCGGAGAAGGACGCG
GAGCTGCTGTATGAGGCCAGGGATTCCATCAAAGATGAAGGAAGGATGACAAGGGAGCAGGTATGCATACATACACTGAA
CCGCCAATGGAAAAAA-CAATTTTGAACAAATGTTCAGCGAAAT-CTGCAAGTTTTTCTTATGCTGATGAATTTCTGGTT
GGTATTTCAAATTCAGTATGCAGCCCTTCGGAGGAAGATTGGTGGCACCTACAAGGATTTCTTCAAGTCATATGTTGAAG
GTACCCTGCCTATACCC----TCACAGATACAGAGATGACCTCATGTTTTATCTA---TTGATTTCTCAGGCAGTACAAT
ATTTGTATACTACT-----GCAGCATAAACTGTTGGGATTAATATGACCTCACATTGTATAAGAATATTTTGTCTCACAC
GA--TTTTTTCTACCCGACCTTCCTCTGAGCAAACAACATACAATAAATCATGTTACTGAATGCTGACCAAATAATTTGT
TTCTGAAAATACAGTTGACGGAGAATACGTGGAGGAAGGTTGGGTGGACAAGACCTGCAAAGTTTGCAAGAAAGACACAA
GAGGGGAGCCAAGGCAAGTTGACAATCTCGGAAGATATATGCATGTGGCGTGCGCAGAGAACTCGAAACCAACAAACTTC
TTTTCCAAGCTCTTCAGCAGATGAACTTCTTTTGTACCAACAAACCCGTTGTTCGGCTCATGGTTAGATAAAT-GATGGA
TGCTATAACATCAAGGGATTAGGACAGTGATGTGATGTGTGCTTGTGTTGTTCATGCAAAATGGTTTTTGATGAGCATGC
C--CACATTCCATTATCCAATTTCGTTGGTATATCAAGTAGCACATGAACAGAGGCCTGATTTATGGAGAAATAGATGAA
CCACTGAAAACTATACATAATACTAGCACAATATTCTACTACAAGTTAACATTATGAGGTATTATCTACTAGGTAGTGCT
CCTCAACTCCTAGGCTGAATACAGGAGAAGCTTAACAGAAACTTTGTCCGACAGACTTACTATAAGCTAATTGCT---TG
CTTACCTAATGGTTGTCATATGATGTGTTCAGAAGTCCATGGCATTAAGCTTACTCAAGTAAACCCTGCATTTGATGACG
GTGCACCCGATCTTAAACCCCGGCATGACTGTAAACCCAACATTGAACTTCTCTTCTCT---GATAATCTTGGCTGGAGT
ACTTTCCATGTGTTCCTTCCGAAACTGAACACCACTCTTGACATAAAACATTTCAGCTCTGGGATTCAGAGAACGAGCAA
CTGCGAGTAGTGCCCATGTATATCTTGCCATCCTCACAAATTTCTGGTAAAATGGCGTCCTTGGATGACCGCCGCTCTCT
ACAAATGCTCTGTGATCCAAGTTCCCGAAGAAGGAATCCTCCATGCTCTGGGGCACAGCCACTAGATACTTTGCTCTGCA
ATATCTCCCGAAACTGGAATCTGGATCAGTCATGAGAGCGTCAAATGGATCTTTGAAGCTCATGATACAGTCAACTGAAT
CCAGGGATGTATGGTCATCTCTGTCTGCCATAAGCATCACACAAGCAAAATAGGCCTCAACAGCATACTTCTTGTCAGCC
CTTCTCTCACATGCAACTTGACTGTCGATTGCAAATGTGGATAGGCCGAGGTTCCATCCGGAAACTTTTGTCCAATCAAA
GATGAATTTTGCAAAATCATGGATGCACTTTGACGAAC
>SNPs
---------------------------S-------S--------SS---S-S-S--------------------------
----------------SSSSSSSSS-------------------------------------------------------
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---------------------------------------------------------------------S----------
----------------------------------------S----------------------S--S-------------
S-------S---S------S----S---------S-------S-------------------------------------
-------S--------------S-----SS--------------S-----------------------------------
-----------S------------------S-----------------S----------SS------------S------
-------S-------------S-------SS-----------------S-------S-----------------S-----
-S------------S------------------S---S--------S----S----SSS-------------S-------
---------S-S--------------------SS-SS-------------------------------------------
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--------------------------------------------------------------------S-----------
---S----------S-----------S--S-S------------------------------------------------
-----------------------------------------S----------------------------S-----S---
---------------------------------------------------------S----------------------
---------------------S------------------------S---------------------------------
----------------------------------------------------S---------------------------
------------------------------------------------------------------------S-------
------------------------------------------S-------------S-----------------------
-------------S-------------------------S----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S-S---SSSSSS-SS--
SSSS--S-----------------------S-S--SSSSSS--SS--------------------------S--------
---S----------------------------------------------------------------------------
-----------------------------------------------------------------------S---S----
-------S--S-----------S---------SS-------------------S--------------------------
-----S--------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------S---------------------------------S-------------------------------------
------------------------------------------------------------------------------S-
-------------------S------------S----S-------S----------------------------------
------------------------------------------------------------------------S-------
------------------------------------------------S---------------S-S-------------
---------------S--------------------------------------S---------SS--------------
-----------------------------S-----------------------S---SSSSS-----S---------S--
------------S---------------------S-------------------------S----------S--------
----------------------S--------------------------------------------S-S-----S---S
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------S-------------------------------------------------------------------------
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>forward_1863
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---GATGATGGCGTGCTTGAAGC---------------------------------------------------------
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>reverse_3560
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---------------------------------------TAGGGCCTATGCGAAAGCAG---------------------
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>forward_3433
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-----------------------------------------------------GCGGTGAAGGAGAACCAACT-------
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>reverse_4518
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-------------------------------------ATAGCACACGAACAGAGGCC-----------------------
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