>input_sequence_63994
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------------------ATGGAGATGCTGGCGGGCGTGCAAGACGGCCTGAACATAGAGCAAGAGTATGTCAATGCGAT
GCGCACGCAGTCTAACATGCGCTTCTTATCAAACAAGGAAGAGATGGAAGCCCTTCTTCAGCCTCAGCAAGATCTCATCC
TTCCAATGCTTCACAACATGAGGCGGAGAAAATCTGCTGAAATTGAGCTCGCAATGACTGGTTACTTTGATGCCAGTGCC
GAGGCCTCAGAGATCTGCAAGCAGCTACTGAGGAACATCAAGAACACTGAAAGCAACTACCAATCAATGGACAGCTTCCT
TGCAAGCATAGGCTGTACTACTGCCACTAGTAGTACCTCCCTTGCACTGGAAACAATCCCGGGTAGAAGCAACCCTTTCA
GCACCACCACAAGGAGCAATTTCAGACAGATTCATGACAGGTACTCCTCCGTGCTCCAGACCATCAAATCAAGTCACAGG
AAAGTGGCAAAGAAGCTCAAGATAGTGAAAATCATCAAGAAGCTCTCAAGGACTTGCCTCGTCATTGCCGGTGGTGCGGT
TGCCATCGGGATTGCAGCACACCTGCTGGTCTTTAGCCTTCTGGTTGGATCTGCGCTCATGGGGCTCTGCCCTATTGCGC
TCAAGAGAAGGGTCACAAGGCTGAAACGTTCCAAGACAAAGTCTTTGCAGCAGTTGCAGGAGCAACTCGATACTGCCGCA
AAGGGCACATATGTTCTTGGCAGGGACTTCGATACGGTGAGCCAACTTGCCGTGCGCCTCTCTGACGGTATTGAGCGGGA
GAATGCAATGGCAACATATTGCATGGAGATGGTGGATGAGAAGTATCCGGTGCAGGAGATGGTGGTGGAGCTGAGGAGGA
GTTGTTCTAGCTCTAGGAGATTGGCCATGGAGCTAGAAGAGCACGTGGGCCTGTGCCTTGCTACAATCCATAGAGCTAGA
CTTTTGGTGATCGAAGAGATCTCCAAGCAAGCTTGA--------------------------------------------
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>chr7D_1_TraesCS7D01G405100
TGCAAGCAAGAGGCAAGAGCAGTGCATTTCTGTGGCAAAGTGCCAACCGTACTATAGGGATAAATTGAAAATACAGAGAT
TGTCCTCCCATTTTTGTTAAGTCACTGTTCCTTTTTGTCCAGTAGTTTAAGCAAGCTGTTACCAATTGATCTGTTTAAAT
TGATCTGGT--------------GGCTTGCATCCATTTGATCTGTTAATATGTTCTGAACATCTAAACCACCAGTTTGTT
TCTTTGCACAAGTGCATGTTCTAAAATGTGACGGCATGCCCACAATGCACTCAATTGTTTAGTTTTTACTTCATGGCAGA
CTGTTGAAGATGTTGGATACACATTTCAAAGAAAATGATGTGTCTTGGCGCAGGCAAGTAGCCATAAGAAAGGAAGCTAC
TTCAGGCAACTTGAGCACCTGAAGCATAC-----------CTAGTGTCTCTACGGCTTTTTAGAGCAGCAACCACCAGGA
ATTCTTGCACACAATCTAAACGCCCCAGCATGTATGGCGGCTGGTAAAGGACACA-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GA
TGATGAAGATGTACACTGTTGGGGGCTGCTACAGTGATGTGGAGTGCACGAGTTGGCCAGAAAAGAATACACCGTGGAAC
TGCCACAGCCTCAGGATCAGGAGATATCCAGGAGGGTCGGGGAGTGCCAAACTTAAGCCTTAAGCCGCACAAGCTCTTGG
GGCGCAATACAAGACAGAGCACGAGATCTTTATCGCCTCAGGCGCGTGCTTGTATATGAAGCCTGAGGAGAGGAACATTT
AAAGCCAAGGCAGGCGCTAGTGCAGTTGCCAATTGGTGCGCCTGGATAAGAGGAAAACAGTCT--GTCTCAGAAGGATCA
AGAACTTGAAGGAGCTTGGGGGGCCTTGAAGAATCAACGCGTGCATCCACAGGTAAG-ATCGAGCTTCTCTACATGTGCT
TGTTTTCTGTTTTCTCTTCCCAAAACAATTTCGATGGCATGCAGTTCTGTTGAA-TTTAGAGTTTGCAAGCTGAAATTCT
GCGTATT------CAGGTATGGAGATGCTGGCGGGCGTGCAAGACGGCCTGAACATAGAGCAAGAGTATGTCAATGCGAT
GCGCACGCAGTCTAACATGCGCTTCTTATCAAACAAGGAAGAGATGGAAGCCCTTCTTCAGCCTCAGCAAGATCTCATCC
TTCCAATGCTTCACAACATGAGGCGGAGAAAATCTGCTGAAATTGAGCTCGCAATGACTGGTTACTTTGATGCCAGTGCC
GAGGCCTCAGAGATCTGCAAGCAGCTACTGAGGAACATCAAGAACACTGAAAGCAACTACCAATCAATGGACAGCTTCCT
TGCAAGCATAGGCTGTACTACTGCCACTAGTAGTACCTCCCTTGCACTGGAAACAATCCCGGGTAGAAGCAACCCTTTCA
GCACCACCACAAGGAGCAATTTCAGACAGATTCATGACAGGTACTCCTCCGTGCTCCAGACCATCAAATCAAGTCACAGG
AAAGTGGCAAAGAAGCTCAAGATAGTGAAAATCATCAAGAAGCTCTCAAGGACTTGCCTCGTCATTGCCGGTGGTGCGGT
TGCCATCGGGATTGCAGCACACCTGCTGGTCTTTAGCCTTCTGGTTGGATCTGCGCTCATGGGGCTCTGCCCTATTGCGC
TCAAGAGAAGGGTCACAAGGCTGAAACGTTCCAAGACAAAGTCTTTGCAGCAGTTGCAGGAGCAACTCGATACTGCCGCA
AAGGGCACATATGTTCTTGGCAGGGACTTCGATACGGTGAGCCAACTTGCCGTGCGCCTCTCTGACGGTATTGAGCGGGA
GAATGCAATGGCAACATATTGCATGGAGATGGTGGATGAGAAGTATCCGGTGCAGGAGATGGTGGTGGAGCTGAGGAGGA
GTTGTTCTAGCTCTAGGAGATTGGCCATGGAGCTAGAAGAGCACGTGGGCCTGTGCCTTGCTACAATCCATAGAGCTAGA
CTTTTGGTGATCGAAGAGATCTCCAAGCAAGCTTGAATACAGTTGCCTGTTTAGTTAGTGTGGACATTATGTTTAGGAGT
A---CTTCAGAAATGTTTATAC-TTTTTGTTAGACCGTGGAGGGAATTTGCACTTCAATACATTAGGATAGAAAATTAGG
GCGATTTAGCTTCATCCAAAGAAGGAAAAGGAAGAAAAAACAAAAATAACGGACTA-TTTGTGAGAGTTTGAGCAAAACT
AGAAATATCAACTGCAATTTCTTGCAGGGAAATTGATGCTTTCTTGTACAATCAGTGTATATATGAAAACATTCTGAGAT
TATTTCTGAAATAGTACAAGCAAGTAAAAAAC---TTCAACCTATCCTCAAA--TATTCTGTTTCTAAACAGTTGTTAGC
AATTTATGTTCAATGTCTGTTCATGATTGAAGTTCAATATGATGGCTACTATTCGAAGGTAACATGCTTGAGGCAAACCA
AACAGCATTAATATTGACAGAAAATG-GTCAAGAGACTATGCAATATGATATTTTGTTTACACATGAGGCTTCAGGCTTC
CTCAGAACGGAGAAAACTGCTGTATTTTAGACACATAAAATTAATATTAGGATGTGTATTTAGGTCATACCTGATAGTGT
GCATTGTATGCCATCCATGAAGTTAGAAGTGGCGAGAATTGGCATCATTATGGATACATACTTTACTATCTCTTCTTCAT
TGCTGTACAAATAACCCCACACATCTCGTACAGAAACTGTGATGATAACTACAAGAAGGCCTTCTGCTAGGCACATGATT
CCTGAAATAAGAACTGATAGACGTGCTGCTTGTGGATTCCCGGCGCCTAATTCATTGGACACTCTAATACTGCGTACAAA
CATAAATCATGAATTCAAACTGGTTAAGTACAAGTTTGAGATGTTAATTCTTACAAAATGAAAGGAACAGAGTGGAATTC
TGAATTTGTGTTCCTCTGACCTTATTGCACTGCTGAGGCCGCTTGGAATTGTATAAACCATCCACATTGTGTTTAGGCTA
GAAAAAT
>chr7A_1
TGCAAGCAAGAGGCAAGAGCAGTGCATTTCTGTGGCAAAGTGCCAACCGTACTACAGGAATAAATTGAAAATACAGAGAT
TGTCCTCTCATTTTTGTCAAGTCACTGTTCAATTTTGTTCAGCAGTTTAAGCAAGTTGTTACCAATTGATCT--------
------GGT--------------GGCTTGCATCCGTTTGATCTGTTAATATGTTCTGAACACCCAAACCACCAGTTTGTT
TCTTTGCACAAGTGCATGTTCTAAAATGTGATGGCATGCCCATAATGCACTCAATTCTTTATTTTTTACTTCATGGCAGA
CTGTTGAAGATGTTGGATACACATTTCAAAGAAAATGATGTGTCTTGGCGCGGGCAAGTAGCCATAAGAAAGGAAGCTAC
TTCAGGCAACTTGAGCACCTGAAGCATAC-----------CTAGTGTCTCTACGGCTTATTAGAGCAGCAACCACCAGGA
AATCTTGCACACAATCTAAACGCCCCAGCATGTACGGCGGCTGGTAAAGGACACA-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GA
TGATGAAGATGTACACTGCTGGA--CTGCTACAGTGATGTGGAGTGCACGAGTTGGTCAGAAAAGAATACACCGTGGAAC
TGCCACAGCCTCAGGATCAGGAGATATCCAGGAGGGTCAGGGAGTGCCAAACTTAAGCCTTAAGCCGCACAAGCTCTTGG
GGCGCAATACAAGACAAAGCACGAGATTTTTATCGGCTCAG----GTGCTTGTATATAAAGCCTGAGGAGAGATACATTT
AAAGCCAAGGAAGGCGCTAGTGCAGTTGCCAATTGGTGCACCAAGATAAGAGGCATACAGTGACCGTCTCAGAAGGATCA
AGAACTTGAAGGAGCTTGGGGGGCCTTGAAGAATCAACGCGTGAATTCACAGGTAAG-ATCGAGCTTCTCTACATGTGCT
TGTTTTCTGTTTTCTCTTCCCAAAACAATTTCGATGGCATGCAGTTCTGTTGAA-TTTAGAGTTTGCAAGCTGAAATTCT
GCGTGTTCTGCAGCAGGTATGGAGATGCTGGCGGGCGTGCAAGATGGCCTGAACATAGAGCAAGAGTATATCAACGCGAT
GCGCACGCAGTCTAACGTGCGCTTCTTATCAAACAAGGAAGAGATGGAAGCCCTTCTTCAGCCTCAGCAAGATCTCATCC
TTCCGATGCTTCACAAAATGGGGCAGAAAAAATCTGCTGAAATCAAGCTCGCAATGTCCGGTTACTTTGATGCCAGTGCT
GAGGCCTCGGAGATCTGCAAGCAGCTACTGAGGAATATCAAGAACACCGAAAGCAACTACCAATCAATGGACAGCTTCCT
TGCAAGCATAGGCTGTACTACTGCCCCTAGTAGTACCTCCCTTGCACTGGAAACAATCCCGGGTAGAAGCAACCCTTTCA
GCACCACCACAAGGAGCAATTTCAGACAGATTCATGACAGGTACTCCTCCGTGCTCAAGACCATCAAATCAAGTCACAGG
AAAGTGGCAAAGAAGCTCAAGATAGTGAAAATCATCAAGAAGCTCTCAAGGACTTGCCTTGTCATTGCCGGTGGTGCGGT
TGCCATTGGGATTGCAGCACACCTGCTGGTCTTTAGCCTTCTGGTTGGATCTGCGCTCATGGGGCTCTGCCCTATTGCGG
TCAAGAGGAGGGTCACGAGGCTGAAACGTTCTAAGACAGAGTCTTTGCAGCAGCTGCAGGAGCAACTTGATACTGCCGCA
AAGGGCACATATGTTCTTGGCAGGGACTTCGACACGGTGAGCCAACTCGCCGTGCGCCTCTCTGATGGTATCGAGCGGGA
GAATGCAATGGCAACATATTGCATGGAGATGGTGGATGAGAAGTATCCGGTGCAGGAGATGGTGTTGGAGCTGAGGAGGA
GTTGTTCCAGCTCTAGGAGATTGGCCATAGAGCTAGAAGAGCACGTGGGCCTGTGCCTTGCTACAATCCATAGAGCTAGA
GTTTTGGTGATCGAAGAGATCTCCAAGCAAGCATGAATACAGTTGCCTGTTTAGTTAGTGTGGACATTATGTGTAGGAGT
ACTACTTCAGAGATGTATATA--TTTTTGTTAGATCGTGCAGGGAATTTGCACTTCAATACATTAGGATGGAAAATTAGG
ACAATTTAGCTTCAGCCAAAGAAAGAAAAGGAAGAAAAAACAAAAATAAACGGACGGTTTGTGAGAGTTTGAGCAAAACT
AGAAATATCAACTGCAATTTCTTGCAGGGAAATTGATGCTTTGTTGTACAGTCAGTGTATATATGAAAACATTCTGAGAT
TATTTCTGAAATAGCACATGCAAGTAAAAAAAAAATTCCACCCATCCTCCAAATTATCCTGTTTCTAAACATTTGTTAGC
AATTTATGTTCAATATCTGTTAATGATTTAAGTTCAATCTGATGGCTACTATTCGAAGGTAACATGCTTGAGGCAAACCA
AACAGCATTAATATTGGCAGAAAATGAGTCAGGGGACTATGCAACATGA-ATTCTGTTTACACATA-------AGGCTTC
CTCAGAAGGGAGAAAATTACTGTATTCTAGACATATAAAATTAATATTAAGATGTGTATTTAGGCCATACCTGATAGCGT
GCATTGTATTCCATCCATGAAGTTAGAAGTGGCGAGAATTGGCATCATTATTGATACATACTTTACTATCTCTTCTTCAT
TGCTGTACAAATAACCCCACACATCTCGTACAGAAACTGTGATGATAACTACAAGGAGGCCTTCTACTAGGCACATAATT
CCTGAAATAAGAACTGATAGACGTGCTGCCTGTGGATTCCCGGCGCCTAATTCATTGGACACTCTAATACTGCGTACAAA
CATTAATCATGAATTCAAACTGGTTAAGTACAATTTTGAGATGTTAAATCTCATAAAATGAAAGGAACGGAGTGGAATTC
TGATATTGTGCTCCCCTGACCTTATTGCACTGCTGAGGCCACTTGGAATTGTATAAACCATCCACATTGTGTTTAGGCTA
GATAAAT
>chr7B_13
------------GCAAGAGCAGTGCATTTCTGTGGCAAAGTGCCAACCGATATACAGGAATAAATTGAAAATACAGAGAT
TGTTCTCTCATTTTTGTTAAGTCACTGTTCATTTTGGTCCAGTAGTTTAAGCAAGCTGTTACCAATTGATCT--------
------GTTTAAATTGATCTGGGGGCTTGCATCCATTTGATCTGTTAATATGTTCTGAGCATCTAAACCACCAGTTTGTT
TCTTTGCACAACTGCATGTTCTAAAATGTGATGGCATGCCCACAATGCACTCAATTGTTTAGTTTTTACTTCATGGCAGA
CTGTTGAAGATGTTGGATACACATATCAAAGAAAATGACGTGTCTTGGTGCAGGCAAGTAGCCATAAGAAAGGAAGCTAC
TTCAGGCAACTTGAGCACCTGAAGCATACCTAAGTAGCCGCTAGTGTCTCTACGGCTTATTAGAGCAGCAACCACCAGGA
AATCTTGCACACAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
TGATGAAGATGTACACCGTTGGA--CTGCTACAGTGATGTGGAGTGCACGAGTTGGTCATAAAAGAATACAGCGTGGAAC
TGCCACAGCCTCAGGATCAGGAGATATCCAAGGGAGCCAGGGAGTGGCAAACTTAAGCCTTAAGCCGCACAAGCTCTTGG
GGCGCAATACAAGACAAAGCACGAGATTTTTATTGGCTCAG----GAGCTTGTATATAAAGCCTGAGGAGAGATACATTC
AAAGCCAAGGAAGGCGCTAGTGCAGTTGCCAATTGGTGCACCAGGATAAGAGGCAAACAGTGACTGTCTCA-AAGGATCA
AGAACTTGAAGGAGCTTGGGGGGCCTTGAAGAATCAACGCGTGCATCCACAGGTGAACATCGAGCTTCTCTACATGTGCT
TGTTTTCTGTTTTCTCTTCCCAAAACAATTCCGATGGCATGCAGTTCTGTTGAAATTTAGAGTTTGCGAGCTGAAATTCT
GCGTGTTCTGTAGCAGGCATGGAGATGCTGGCGGGCGTGCAAGACGGCCTGAACATAGAGCAAGAGTATGCCAACGCGAT
GCGCACGCAGTCTAACATGCGCTTCTTATCAAACAAGGAAGAGATGGAAGCCCTTCTTCAGCCTCAGCAAGATCTCATCC
TTCCAATGCTTCACAGCACGAGGCGGAGAAAATCTTCTGAAATTCAGCTCGCAATGTCCGGTTACTTTGATGCCAGTGCT
GAGGCCTCGGAGATCTGCAAGCAGCTACTGAGGAACATCAAGAACACCGAAAGCAACTACCAATCAATGGACAGCTTCCT
TGCAAGCATAGGCTGTACTACTGCCACTAGTAGTACCTCCCTTGCACTGGAAACAATCCCTGTTAGAAGCAACCCTTTCA
GCACCACCACAAGAAGCAATTTCAGACAGATTCATGACAGGTACTCCTCCGTGCTCCAGACCATCAAATCAAGTCACAGG
AAAGTGGCAAAGAAGCTCAAGATAGTGAAAATCATCAAGAAGCTCTCAAGGACTTGCCTCGTCATTGCAGGTGGTGCGGT
TGCCATCGGGATTGCAGCACACCTGCTGGTCTTTAGCCTTCTGGTTGGATCTGCGCTCATGGGGCTCTGCCCTATTGCGT
TCAAGAGGAGGGTCACGAGGCTGAAACGTTCTAAGACAGAGTCTTTGCAGCAGCTGCAGGAGCAACTTGATACTGCCGCA
AAGGGCACGTATGTTCTTGGCAGGGACTTCGACACGGTGAGCCACCTTGCAGTGCGCCTCTCGGACGGTATTGAGCGGGA
GAATGCAATGGCAACATATTGCATGGAGATGGTGGATGAGAAGTATCCCGTGCAGGAGATGGTGATGGAGCTGAGGAGGA
GTTGTTCTAGCTCTAGGAGATTGGCCATGGAGCTAGAAGAGCACGTGGGTCTGTGCCTTGCTACAATCCATAGAGCTAGA
GTTTTGGTGATCGAAGAGATCTCCAAGCAAGCTTGA-TACAGTTGCCTGTTTAGTTAGTGTGGACATTATGTTTAGGAGT
A---CTTCAGAGATGTTTATATTTTTTTGTTAGACCATGCAGGGAATTTGCACTTCAATACATTAGGATAGAAAATTAGG
GCGATTTAGCTTCATCGAAAGAAGGAAAAGGAAGACAAAACAAAAATAAACAGATGGTTTGTGAGAGTTTGAGCAAAACT
AGAAATATCAACTGCAATTTCTCGTGGGGAAATTGATGCTTTCTTGTACAGTCAGTGTATATATGAAAACATTCTGAGAT
TATTTCTGAAATAGCACATGCAAGTA---AAAAAAATTCACCCATCCTACAAATTATCCTGTTTCTAAACATTTGTTAGC
AATTTATGTTCAATATCTGTTAATGATTGAAGTTCAATCTGATGGCTGCTATTCAAAGGTAACATGCTTGGGGCAAACCA
AACAGCATTAATATTGGCAGAAAATGAGTCAGGGGACTATGCAACATGACATTCTGTTTACACATA-------AGGCTTC
CTCAGAAGGGAGAAAATTACTGTATTCTAGACACATAAAATTAATATTAAGACGTATATTTAGACCATACCTGATAGCGT
GCATTGTATGCCATCCATGAAGTTAGAAGTGGCGAGAATTGGCATCATTATGGATACATACTTTACTATCTCTTCTTCAT
TGCTGTACAAATAACCCCACACATCTCGTACAGAAACTGTGATGATAACTACAAGAAGGCCTTCTACTAGGCACATAATT
CCTGAAATAAGAACTGATAGACGTGCTGCCTGTGGATTCCCGGCGCCTAATTCATTGGACACTCTAATACTGCGTACAAA
CATTAATCATGAATTCAAACTGGTTAAGTACAATTTTGAGATGTTAAATCTCATAAAATGAAAGGAACGGAGTGGAATTC
TGATATTGTGCTCCCCTGACCTTATTGCACTGCTGAGGCCACTTGGAATTGTATAAACCATCCACATTGTGTTTAAGCTA
GATAAAT
>SNPs
------------------------------------------------------S---S---------------------
-------S----------------------S-----------------------------------------SSSSSSSS
SSSSSS--------------------------------------------------------------------------
-------------------------------S------------------------------------------------
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----------------------------------------------------------S---------------------
-S--------------------------------S---------------------------------------------
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----------------------SSS-------------------------------S-----------------------
--------------------------------------S-----------------------------------------
----------------S----------S-------S-----SSSS------------S--------------SS------
----------S----------------------------S--S----------S-------SS-----------------
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----S---------------------------------------------------------------------S-----
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--------------------------------------------S-----------S-S--------------------S
--------S--------------------------------------S--------------------------------
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-------------------------------------------------------------------------------S
-------S--------S--------------S------S--------------S-------------S------------
--------------------------------S-----------------------------------------------
----------------------------------------------------------------S---------------
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S-------------------------------------------------------------------------------
-----------S---------S-----------------S----------------------------------------
-------------------------------------------------SS-SS-S------------------------
--------------------------------------------------S-----------------------------
--------------S---S------------S------S---S------S-------S-------------S--------
--------------S------S----------------S-----------------------------------------
----------------S--------------S-S----------S----S---S-----------SSSSSSSS-------
-------S--------S-S-------S----------------------S--------------S------------S--
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-----------------------------------------------------------------S----------S---
-----------------------------S--------------------------------------------------
---S-----------------------------S-------------S---S-S--------------S-----------
---SS-----S---S-------------------------S---------------------------------------
--S----
>forward_938
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--------------------------------------CAGGCGCGTGCTTGTATATG----------------------
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>reverse_2706
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-----------------------------------------------------------------GAGGCTTCAGGCTTC
CTCAG---------------------------------------------------------------------------
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