>input_sequence_63822
--------------------------------------------------------------------------------
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----------------------------------------------------------ATGGTTCGCAGACCCTATGACA
CCTATCTTTATGTTGACAACTTCATGTTTAGTCGTCGAACCGAGAAGCAACAAGTTATCAATTTCTTGTTACAGCATAAT
TCTCTTGGTTCTCCACCCGTGCTTCCAATCGTTGGTGGAAGCCTAGTTGGGAAGAAAACTCTGGTAACACATGTATGGAA
TGATGAGAAGGTGTGTAGTTACTTCTCTTCTGTTCTGTACCTCAATGGAGCCAACTTCACTAAAATAGACACTGAAAGGT
GCACATCAGGGAGAATATTGGTTGCTGTCACACTTGTTTCAGATGTAGATGATGAGGATTGGAAATCTTTCTACCGAACG
GTGACATCCATAAGAGTAGAAAGTAAGGTTATAATCATAAGTAGGATGGAAAGTTTGACAAGATATGGTACCGTGAAGGC
AATTTACCTAAGTAAATTACAAGATGAGGAGTACAGCTACTTCTTCAAGACACTAGCATTTGGCAGTGCACACACAAAGG
ACCACCCAAATCTAACACTGTTGATAGGAGAGTTCATCAAGTTATTGGGTGGGTCATTTGTGGGAGCATATTCAATTGCC
AATATATTGAGGAGGGACCTGAGCCTTCAATTCTGGCTTTGCATATTGAACAGATACAAGAATATGACGAAGGCCAACTT
ATCGATGTTTGGTGAGCACTTGTCGGTCCGTGTTAGAATACGATATCCGGTAGATTTCACCAACTTTCTACCTGCG-CCA
GCTGCTCCGCTACTCCTTATGCCTCCTCGAACTGAAGCCGAGGCTTTCGAAAGGAAACTACCCAAGATAAGGATTGGAGA
CCTCGTTGTGGATCCTACCCTTCGTCCCAAGGGTGAGTTCGATTTAGTGACATGGGAATCACAGATACCCCCTTATACTG
AGTTCATTTACCACGTCCCTTCTTGTGCTCAAAGGCAGCCTA---CAACCTTACGGAGGAAGCGTGATGCATATGTTTGT
CTCTAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3B_1_TraesCS3B01G033300
GAGTCGTACACATATTGCTTTGCTAATCTAATCACACAGCAATATTTAGACAGAAGTACTACCTCCGTCTCAAAGAATAT
ATGATATTTTTAGGCTAATTATATTTTGAGACGGAGGTTGTACTAACTAATGTACTATCTGGGACTCGGACTAGGCAAGA
TTATGTGTGCATCAATTGATGCAGAGGCCGGAGGTTCAGCCTCCCTTATCGGAAAAAGAAACAGGTCTGTCACTAAAAGC
ACACCAAAAGTGAACGATGTGCTCATAATTCCACAATGTATTGGTGCTGTGTGAACTACTTCCACCTTAATTATGCTTGT
CATT-AGTTCAACAA-GACGTGGACAGGTCACCAAGAACGCACTCAGTTGCTCTTTCACGCTACAGGCAAAATAGCATGG
CATCCATATAAAG-AAGACCATAGCTCAGAACCTGATCTGTACAAGGTGAAAGCCAAAATAGTTTCCTC-TA--CAAGGT
GAAAACCAAAACAATTTCCTTGTTCATCCCCATCAATCTCAACCTAGCTGGAGTTTTCCGGATGGAAGCAGTTCTGTCTG
CGGCTGCAGGTGATCTTGTTAGCAGATTTTTCTCCTTTTTGGTAAACATGTATCGGGATCCTGCACGCTTGGAGGAGAAG
C------ATATGGAGAGGCTGCAGCAACTCCTACTAAGAGCTCACACAGTTGTCGAGGAGGCGGACGGGCGGTACATCAC
AAACTCTGGTATGCTTATACAACTTAAGATGCTAGCTAGGGCTATGTACCAGGGTTATCATGTGCTAGATACCTTCAAGT
GCAACCAAGTAGTCA---AAGAGAGCACTGAGGAAGTGATGGA---TAGATCATTGGTATCATATATTGGCACTCCGTTG
AAGCGCTTTCGTGCCAACGCTGGTATATGGAATCACAGAGTTGACAGCAGTTGTGACCTACAAGGTGCCTTGTTAAATTT
GGAAAGTGCCATTTCTAATATCACTGAGTTTGTTATACTTTTGAGCGGATGCGAATGAATGGTTCGCAGACCCTATGACA
CCTATCTTTATGTTGACAACTTCATGTTTAGTCGTCGAACCGAGAAGCAACAAGTTATCAATTTCTTGTTACAGCATAAT
TCTCTTGGTTCTCCACCCGTGCTTCCAATCGTTGGTGGAAGCCTAGTTGGGAAGAAAACTCTGGTAACACATGTATGGAA
TGATGAGAAGGTGTGTAGTTACTTCTCTTCTGTTCTGTACCTCAATGGAGCCAACTTCACTAAAATAGACACTGAAAGGT
GCACATCAGGGAGAATATTGGTTGCTGTCACACTTGTTTCAGATGTAGATGATGAGGATTGGAAATCTTTCTACCGAACG
GTGACATCCATAAGAGTAGAAAGTAAGGTTATAATCATAAGTAGGATGGAAAGTTTGACAAGATATGGTACCGTGAAGGC
AATTTACCTAAGTAAATTACAAGATGAGGAGTACAGCTACTTCTTCAAGACACTAGCATTTGGCAGTGCACACACAAAGG
ACCACCCAAATCTAACACTGTTGATAGGAGAGTTCATCAAGTTATTGGGTGGGTCATTTGTGGGAGCATATTCAATTGCC
AATATATTGAGGAGGGACCTGAGCCTTCAATTCTGGCTTTGCATATTGAACAGATACAAGAATATGACGAAGGCCAACTT
ATCGATGTTTGGTGAGCACTTGTCGGTCCGTGTTAGAATACGATATCCGGTAGATTTCACCAACTTTCTACCTGCG-CCA
GCTGCTCCGCTACTCCTTATGCCTCCTCGAACTGAAGCCGAGGCTTTCGAAAGGAAACTACCCAAGATAAGGATTGGAGA
CCTCGTTGTGGATCCTACCCTTCGTCCCAAGGGTGAGTTCGATTTAGTGACATGGGAATCACAGATACCCCCTTATACTG
AGTTCATTTACCACGTCCCTTCTTGTGCTCAAAGGCAGCCTA---CAACCTTACGGAGGAAGCGTGATGCATATGTTTGT
CTCTAGTTTTTTTCTTTGTA----ACATGAGCTTGTCAATATTGAACAATTTGTTTTTATGTTTCACTCCGAAACAAGAA
TTACTCGTTATACATATCCATAAGTACCCATTACAATTGTCAGATTAATGATTTTTGTAATGACTGCATGTTTGTAATTC
TTTAGGAAGAAATTACCTGATTCCTTTACTTTCGGTAAGGGACATAATTTTGAAAAAAAAATATACACGTTTAACATTTT
TCAAATACATGATTAACATTTTTCTATTCTATGTTTTGATGTCTA-TTTTTCATACACACTGTACATTTTTCGTATATAT
CTAAAATATTTTTATGTGCCTTTAACATTTTTTAAATACAAGATTAACATTTTTCAAATATATTTTTTGAAAGTAAATCA
AATATGTTTTGATGTTAAGCAATGAAACATTTTTTGTGAATGAACGCAAA-TTTTTTGTAAACTATGTGAACATTTGTTT
TACATTATATAAACATTTTTAATGTCACAAACATATTTTTGGAAAACATGAATACTTTTTAAC--ATGTAAGCTGCATTT
GTTGTAATTAGGCGAACATTTTTTTATACATTGCATAACATTTTTTTAACTGTCACATATTTTC-AATGCGTGAACATTT
TCAAAATGTTACATCTTAACTAAAACATTTTATCTAATATATGTACTTAC---TTTTTTCCAAAACATAAGTAAGAAAAT
GATAGTGCCATAGTGTGGCAGCATACTGGTTAGGCAGTGACATGAACATTTATATCGAAATGCCACATCTTAACTAAATT
ATTTCTTTGTATTGTATGTACTTAGTTATATCCAAAACATAAAAATAAAAGAAAAAATATTGCCTGACATCAGCATGGTG
ATACACATGGTTAATGGGACGACTCACAACCAGCTCACTGTAAGCGACGCGATCTTGGATCGTGCAGCAAGCGAGACATA
GACTCGCCCCCAATCAGTGCTATGCCGATGCTGTCTTTTCACCTTCAGAGGTTCTGCA
>chr3D_276
ATGCATCGGTC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GTGTGAACTACTTCCACCTTAATTATGCTTGC
CAGGAAGTTCCACATTGATGTGGACTGGTCACCAAGAACGCACTCAGTTGGTCTTTCACGCTACACGGC-AATGCCATGG
CGTCCATATAAAG-AAGACCATAGCTCATAACCTGATCTCTACAAGGTGAAAGCCAAAACAGTTTCCTCTTA--CAAGGC
GAAAACCAAAACAATTTCCTTGTTCATCCCCTTCAATCTCAACCTAGCTAGAGTTTTCGGGATGGATGCGGTTCTGTCTG
CGGCTGCAGGTGATCTTGTTAGCAGATTTTTCTCCTTTTTGGTAAACATGTATTGGGACCCTGCACGCCTGGAGGAGCAG
C------ATATGGAGAGGCTGCAGCAACTCCTGCTAAGAGCTCACACAGTTGTCGAGGAGGCGGATGGGCGGTACATCAC
CAACTCTGATATGCTTATACAACTTAAGATGCTAGCTAGGGCTATGTACCAGGGTTATCACGTGCTAGACACCTTCAAGT
GCAACCAACTAGTCA---AAGAGAGCTCTGAGGAAGTGATGGA---TGGATCATTAGTGTCATATATTGGCACTCCGCTG
AAGCGCTTTCGTGCCAACGCTGGTGTATCGAATCACAAAGTTGACAGCAGTCGTGACCTACAAGGTGCCTTGTTAAATTT
AGAAACCGCCGTTTCTAATATCACTGAGTTTGTTATACTTTTGAGCGGATGCGAGCGAATGGTTCGCAGACCCTATGACA
CCTATCTTTATGTTGACAACTTCATGTTTAGCCGTCGAACTGAGAAGCAACAAGTTATCAATTTCTTGTTACAGCATAAC
CCTCTTGGTTCTCCACCGGTGCTTCCAATTATTGGTGGAAGCCTAGTTGGGAAGAAAACTCTGGTAACACATATATGGAA
TGATGAGAAGGTGCGTAGTTACTTCTCTTCTGTTCTGTACCTCAATGGAGCCAACTTCACTAAAATAGACACTGAAAGGT
GCACATCAGGGAGAAGATTGGTTGTTGTCACATTTGTTTCAGATGTAGATGATGAGGATTGGAAATCTTTCTACCAAGCG
ATGACATCCATAAGAGTAGAAAGTAAGGTTATAATCATAAGTAGGATGGAAAGTTTGACAAGATATGGTACTGTCAAGCC
AATTCACCTAAGTAAATTACAACATGAGGAATACAGCTACTTCTTCAAGACACTAGCATTTGGCAGTGCACAAACAAAGG
ACCACCCAAATCTAACACTGCTGATAGGAGAGTTCAACAAGTTATTGGGTGGGTCATTTGTGGGAGCATATTCAATTGCC
AATATATTGAGGAGGGATCTGAGCCTTCAATTCTGGCTTTGCATATTGAACAGATACAAGAATGTGACAAAGACCAACTT
ATCAATGTTTGGTGAGCATCTGTCGCTCCGTGTTAGAATCCGATATCCAGTGGACTTCACCAACTTTCTACCTGCG-CCC
GCTGCTCCGCTACTCCTTATGCCTCCTCGAACTGAAGCCGAGGTTTTCGAAAAGAAACTACCCAAGCTAAGGATTGGAGA
CCTCGTTGTGGATCCTACCCTTCGTCCAAAGGGTGAGTTCGATTTAGTGACATGGGAATCACAGATACCCCCTTATACTG
AGTTCATTTACCATGTCCCATATTGTGCTCAAAAGCAGCCTAAAACAACCTTACGGAGGAAGCGTGATGCAACTATTTGT
CTCTAGTGTTCTTCTTTGTATATTACATGAGCTTGTCAATATTGGAGAATTTGTTTTTATGTTTTAGTCCGAAACAATAA
TTACTCCTTGTACATATCCGTAAGTACCCATTACAATTGCCCGTTTTTTTTCTTTGGCAATGACTACATGTTCGTAATTC
TTTGGGAAGAAATTACCTAATTCCTTTGCTTTGGGCAAGGAACATAATGTTGATAAAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3B_289
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GTGTGAACTACTTCCACCTTAATTATGCTTGC
CAGGAAGTTCCACATTGACGTGGACTGGTCACCAAGAACGCACTCAGTTGGTCGTTCACGCTACACGGC-AATGCCATGG
CGTCCATATAAAG-AAGACCATAGCTCAGAACCTAATCTCTACAAGGTGAAAGCCAAAACTGTCTCCTCTTATACAAGGC
GAAAACCAAAACAATTTCCTTGTTCATCCCCTTCAATCTCAACCTAGCTAGCATTATCGGGATGGAAGCGGTTCTGTCTG
CGGCTGCAGGTGATCTTGTTAGCAGATTTTTCTCCTTTTTGGTAAATATGTATTGGGTCCCTGCACGCTTGGAGGAGCAG
C------ATATGGAGAGGCTGCAGCAACTCCTGCTGAGAGCTCACACAGTTGTCGAGGAGGCGAATGGGCGGTACATCAC
CAACTCTGGTATGCTTATACAACTTAAGATGCTAGCTAGGGCTATGTACCAGGGTTATCACGTGGTAGACACCTTCAAGT
GCAAACAACTAGTCA---AAGAGAGGTCTGAGGAAGTGATGGA---TAGATCATTAGTGTCATATATTGGCACTCTGCTG
AAGCGCTTTCGTGCCAACGCTGGTGTATCGAATCACAAAGTTGACAGCAGTTGTGATCTACAAGGTGCCTTGTTAAATTT
AGAAACTGCCATTTCTAATGTCACTGAGTTTGTTATACTTTTGAGCGGATGCGAACGAATGGTTCGCAGACCCTATGACA
CCTATCTTTATGTTGACAACTTCATGTTTAGTCGTCGAACGGAGAAGCAACAAGTTATCAATTTCTTGTTACAGCATAAC
TCTCTTGGTTCTCCACCCGTGCTTCCAATCGTTGGTGGAAGCCTAGTTGGGAAGAAAACTCTGGTAACAGATGTATGGAA
TGATGAGAAGGTGCGTAGTTACTTCTCTTCTGTTCTGTACCTCAGTGGAGCCAACTTCACTAAAATAGACACTGAAAGGT
GCACATCAGGGAGAATATTGGTTGTTGTCACACTTGTTTCAGATGTAGATGATGAGGATTGGAAATCTTTCTACCGAGCG
GTGACATCCATAAGAGTAGAAAGTAAGGTTATAATCATAAGTAGGATGGAAAGTTTGACAAGATATGGTACCGTGAAGGC
AATTTACCTAAGTAAATTACAAGATGAGGAGTACAACTACTTCTTCAAGACACTAGCATTTGGCAGTGCACACGCAAAGG
ACCACCCAAACCTAACACTGTTGATAGGAGAGTTCATCAAGTTATTGGGTGGGTCATTTGTGGGAGCATATTCAATTGCC
AATATATTGAGGAGGGATCTAAGCCTTCAATTCTGGCTTTGCATATTGAACAGATACAAGAATGTGACAAAGGCCAACTT
ATCGATGTTTGGTGAGCATTTGTCGGTCCGTGTTAGAATACGATATCCAGTAGATTTCACCAACTTTCTACCTGCG-CCA
GCTGCTCCGCTACTCCTTATGCCTCCTCGAACTGAAGCCGAGGCTTTCGAAAGGAAACTACCGAAGATAAGGATTGGAGA
CCTCGTTGTAGATCCTACCCTTCGTCCCAAGGGTGAGTTCGATTTAGTGACATGGGAATCACAGATACCCCCTTATACTG
AGTTCATTTACCATGTCCCTTCTTGTGCTCAAAGGCAGCCTAAAACAACCTTACGGAGGAAGCGTGATGCATATGTTTGT
CTCTAGTTTTTTCCTTTGTA----ACATGAGCTTGTCAATATTGAACAATTTGTTTTTATGTTTCACCCCGAAACAAGAA
TTACTCGTTATACATATCCATAAGTACCCATTACAATTGTCAGATTAATGTTTTTTGTAATGACTACATGTTTGTAATTT
TTT-GGAAGAAATTACCTGATTCCTTTGCTTTCGGTAAGGGGCATAATTTTGAAGAAAAAAAATACACGTTTAACATTTT
TCAAATACATGATTAACATTTTTCTAATTTATGTTTTGATGTCTATTTTTTCATACACACTGTACATTTTTCATATATCT
CTAAAATATTTTTATGTGCGTTTAACATTTTTTAAATACATGATTAACATTTTTCAAATATATTTTTTGAAAATAAATCA
AATAC------ATGTTAAGCAATGAAACATTTTTTGTGAACGGTCGCAATTTTTTTTGTAAACTATGTGAACATTT-TTT
TACATTATATAAACATTTTTAATGTCACAAACATAATTTTGGAAAACATGAAGACTTTTTTTAATATGTAAGCTGCATTT
GTTTTAATTAGATGAACATCTTTTT-TACATTGCATAACATTTTTTTAACTGTCGCATATTTTCTAACGCGTGAAAATTT
TCAAAATATCACATCTTAACTAAAACATTTTATCTAATATATGTACTTAGTTTTTTTTTCCAAAACATAAATAAGAAAAG
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3D_289
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GTGAGAACTGCCTCTACATTAATTATGCTTGT
GATT-AGTTCCACCTTGACGTGGATTGATCACCAAGACCGCACCCAATTGGTATTTCACGCTACACGGC-AATACCATGT
CATCCATTTAAAGGAAGACAATAGCTCAGAACCTGATCTCTACAAGCTGAAAACCAAAACAATTTCCTCTACAAGC---T
CAGAACCAAAATACTTTCTTGGTTCATCCCCTTTAGTCTCAAC----CTAGAGTTTTTGAGATGGAAGCGGTTCTTTCTG
CGGTTACAGGTGACCTCGTTAGCAGATTTTTCTCCTTTCTGATAAGCAAATACTCGGCTCTCACATGCTCAGGGGAGACG
CATGTGGATGTGGAGAGGTTGCAACAACTCTTGTTAAGAGCTCAAATGGTTGTTGAGGAGGCAGATGCGCGGTATATCAC
CAACTCTGGTATGCTTCTACAACTGAAGATGCTAGCTAGGGCTATGTACCACGGTTATTATGCGCTAGACACTTTCAAGT
GCAACCAACTCATAAACAAAGAGGGCTCCAAGGAAGTGATGGATACTGGCTCATTTGGATCATATCTTGGCACTGCCCTG
AAGCGCTTCCGCACAAACACTGATGTATCAAGTCACAAAGTTTATAACAAGTGCGACCTAGAAGATGCCTTGTTGAATTT
AGAGATTGCCGTTTCTAATATCACAGAGTTTGTTATACTTTTGGGTGGGTGCCAACCCATGTTTCGCAGACCCTATGATA
CATACCTTTACATCAACAACTTCATGTTCGGTCGCTGGACCGAGAAGCAACAAGTTATAAACTTCTTGTTACAATGCTTC
CATCTTGGTTCTCCGCCTGTGCTTGCCATCATCGGCGGCTTTCAAGTCGGGAAGAAAACTCTCGTCGCTCATGTATGCAA
TGATGAGAACGTCCGTAGA-ACTTCTCTTCAATTTTGCACTTTAATGAAGACAATTTCTGTAGGATAGACAATGAAAGGT
GCACATCAGGAAGAACACTGGTTATTGTCGAATTTCATTCAGATGTTGATGATGAGAAGTGGAAACCCTTTTACCAGGCA
ATGACATCCATGAGCATAGGAAGTAAGGTTATAATCATAAGTAGGATGGAAAGCTTGAAGAGATATGGTACTGTGAAGCC
AATCCACCTAAGTAGATTACCAGATGAGGAGTACATTTACCTCTTCAAGACACTAGCATTTGGAAGTTCACGGAGTGAGG
ACCACCCAAAGTTGATGCTGTTGGCAGGAGAGTTCATCAAACTGTTGGACGGGTCATTTGTGGCAGCATATTCAGTCACC
AATGGGTTGAGGACGAATCTAAGCCCTCAATACTGGATTTGTATGTTTAACAGATACAAGAATGTGATGAAGAACAACTT
GTTCATGTTTGGTGAGCATATCTCAAACCGTTTCGAAAGACATTATCCAGTCGACTTCACCAGCTTT-TTCCTTCT-CCC
GCTGCTCCGCTATATGTTATGCCTCCTCTGACTGAAGCTGAGGTTTCCGAAAGGAGACTACCCAAGATTAGGATTAGAGA
CATCATTGATGATCCCTCGATTCTTCCCAAGGGTGACTTTGTATTAGTGATATGGGAATCAAGGATACCCCCTTATACCA
AGTTCAGTTACCATGTTCCGTCTTGTGCTCAACCGCAACCTAAAACAACATTGAGGAGGAAGCGTGAAGCGACTATTTCT
CTGTAGTGTCTTTCT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3D_473
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
GAAAGCAAAAACAGTTTCCTTGTTCAACACCACA-----CAAC----CTAAAGTTCTCGGGATGGAAGCAATTCTGTCTG
CGGCTACAGGTGACCTTGTTAGCAGATTTTTCTCCTTTCTGATAAGCAGATATTCGGGACTCGTATGCTCAGAGGGGAAG
CATGTGGATGTGGAGAGGTTGCAGCAACTCCTGCTAAGAGCTCAGATGGTTGTCGAGGAAGCAGATGGGCGGTACATCAC
CAACTCTGGTATGCTTCTACAACTCAAGATGCTAGCTAGGGCTATGTACCATGGTTATCATGCTCTAGACACTTTCAAGT
GCAACCAACTAATCAACAAAGAGGGCTCTACGGAAGTGATGAGTACTGGCTCATTTATGTCATATCTTGGCACTCCCCTC
AAGCGCTTCCGTACACACGCTGGTATATCGGATCACAAAGTTTGTAACAAGCAGGACCTACAAGGTGCCTTACTGAATTT
AGAGACGGTCATCTCTAATATTACAGAGTTTGTTATACTTTTGGGCGGGTGCAAACCCATGTTTCGCAGACCCTATGACA
CATACCTTTACGTCAACAACTTCATGTTCGGTCGTTTGACAGAGAAGCAACAAGCCATCAACTTCTTGTTAGAACGCAAC
CATCTTGGTTCTCCATCTGTGCTTGCCATTATCGGTGGCTACCGAGTCGGGAAGAAAACTTTGGTCGCACATGTATGCAA
TGATGAGAACGTTCGTAGTCACTTCTCTTCAATTTTGCAGCTTAGTGCAGACAACTTCTCTAGGATAGACAATGAAAGGG
GCACATCAGGGAGAGCATTGGTTATTGTTGAATTTCTTTCAGATGTTGATGATGGGGAGTGGGAACCTTTTTACCGGGCA
GTGACATCCACAAGCATAGAAAGTAAGGTTATAATCATAAGTAGGATGGAAAGCTTGACGAGATATGGTACTGTGAAGCC
AATCCACCTAAGTAAATTATCAGATGAGGAGTACATCTACCTCTTCAAGACACTAGCATTTGGAAGTGCACACAGTGAGG
ACTATCCAAAGCTGACACTGTTGGCAGGAGAATTCATCAAATTGTTGGATGGGTCATTTGTGGCAGCATATTCAGTTGCC
AATGGGTTGAGGACGAATCTAAGCCTTCGATACTGGATTTGTATGTTTAAGAGATACAAGAATGTGACAAAGAAAAACTT
GTCCATGTTTGGTGAGCATATTGCAGACCGTTTCAAAAGAAATTGTCCAGTCGACTTCACCAACTTTCTTCCTTCT-CCC
GCTGCTCCGCTATACCTTATGCCTCCTCAGACTGAAGCTGAGGTTCCCGAAAGGAGACTGCCCAAGATTAAGATTAGAGA
CATCATTGATAATCCCTCTGTTCGTCCCAAGGGTGACTTTGTATTAGTGACATGGGAATCTAGGATACCCCCATATAATG
AGTACAGTTACTATGTCCCATCTTGTGCTCAGTCGCAACCTAAAACAACCATGAGGAGGAAGCGTGAAGCAACTATTTCT
CTCTAGTGTTCTTT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3B_526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGTTCTCAGAATGGAAGTTGTTCTGTCTG
CGGCTGCAGGTGACCTTGTTAGCAGATTCTTCTCCTTTTTGATCGGGAGGTATTCAGAAGCACCATGCTCGGAGGAGAAG
C------ATGCCGAGAGGTTGCAGCGACTCCTGCTAAGAGCTCAGATGGTTGTCGAGGAGGCGGATGGGAGGTACATCAC
CAACTCCGGTATGCTTCTGCAACTGAAGATGCTAGCTACGGCTATGTACCATGGTTATCATGCACTAGACACCTTCAAAT
GCAACCAACTAATCA---GAGAGGGCACTAAGGAAGTAATGAGTTCTGGCTCATTTTCCTCATATCTTGCCACTCCCTTG
AAGCGCTTCCGTGCAAATGCTGGTGTATCGAATCACCAAGTTGATAACAACTGTGACCTTCAAGATGCCTTGTTAAATTT
AGAGACCGTTGTTTCTAATATCACAGAGTTTGTCATACTTTTGGGTGGGTGTGAACCCATGTTTCGCAGACCCTATGACA
CATATCTTTATGTCAACAACTGTATGTTCGGTCGTTGGACTGAGAAGCAACAAGTTATCAACTTCTTGTTGCAGCGCAAC
CCTCGTGCTTCTCCATCTGTACTTCCAATCATCGGTGGCTATCTAGTCGGGAAGAAAACTCTGGTAGCACATGTATGCAA
TGATGAAAAGGTCCGTAGTTACTTCTCTTCAATTTTGCACTTCAATGGAGACAACTTCCATATGGTAGAAACAGAAAGGT
GCA---CAGGGAGGGCATTGGTCGTTGTTAAATTTGTTTCAGAGGTCAATGATGAGGACTGGAAATCATTTTACCGGGCA
GTGACATCCATAAGCACAGAAAGTAAGGTTATAATCATTAGTAGGATGGAAAGTTTGACTAGATATGGTACTGTGAAGCC
AATTCACCTAAGTAGATTACCAGATGAGGAGTACAGCTACCTCTTTAAGGCACTAGCATTTGGAAGTGCCCACAGTGAGG
ACCACCCAAAGCTGACACTGTTAGCAGGAGAGTTCATCAAATTGTTGGACGGGTCATTTGTGGCAGCATATTCACTTACC
AATGGGTTGAGGACAAATCTAAGCCTTCAGTTCTGGCTCTCCATGTTGAAGAGATACAAGAATGTGACAAAGAACAACTT
GTCAATGTTTGGTGAGCATCCATCAGACCGTTTCAAAAAACGATGTGCAGTAGACTTCACCAACTTTCTTCCCTCT-CCT
GCTGCTCCACTACACCTTATGCCTCCTCGAACTGAAGCC------------AGGAAACTACCTAAGATAAGGATTGGAGA
GATCATTGAGAATTCCTCCCTTCGTCCTAAGGGTGACTTTGTATTAGTGACATGGGAATCACAGATACCTCCTTATACCG
AGTTCAGTTACCATGTCCCGTATTGTGCTCAACAGCAGCCTAAAACAACCTTGCGGAGGAAGCGTGAAGCTATTATTTCT
CTCTAGTGTTCTTTTCTTT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3A_536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGGAAGTTGTTCTGTCTG
CGGCTGCAGGTGACCTTGTTAGCAGATTCTTCTCCTTTTTGATCGGGAGGTATTCAGAAGCGCCATGCTCGGAGGAGAAA
C------ATGCCGAGAGGTTGCAGCAACTCCTGCTAAGAGCTCAGATGGTTGTCGAGGAGGCGGATGGGAGGTACATCAC
CAACTCTGGTATGCTTCTGCAACTGAAGATGGTAGCTAGGGCTATGTACCATGGTTATCATGCACTAGACACCTTCAAGT
GCAACCAACTAATCA---GAGAGGGCACTAAGGAAGTGATGAGTTCTGGCTCATTTGCCTCATATCTTGCCACTCCCTTG
AAGCGCTCCCGTGCAAATGCTGGTGTATCGAATCACCAAGTTGATAACAACTGTGACCTACAAGATGCCTTGTTAAATTT
AGAGACCGTTGTTTCTAATATCACAGAGTTTGTCATACTTTTGGGTGGGTGTGAACCCATGTTTCGCAGACCCTATGACA
CATATCTTTATGTTGACAACTGTATGTTCGGTCGTTGGACTGAGAAGCAACAAGTTATCAACTTCTTGTTGCAGCACAAC
CCTCGTGCTTCTCCATCTGTACTTCCAATCATCGGTGGCTATCTAGTCGGGAAGAAAACTCTGGTAGCACATGTATGCAA
TGATGAAAAGGTCCGTAGTTACTTCTCTTCAATTTTGCACTTCAATGGAGACAACTTTCATATGGTAGAAACAGAAAGGT
GCA---CAGGGAGGGCATTGGTCGTTGTTAAATTAGTTTCAGAGGTCAATGATGAGGACTGGAAATCATTTTACTGGGCA
GTGACATCCATAAGCACAGAAAGTAAGGTTATAATCATTAGTAGGATGGAAAGTTTGACTAGATATGGTACTGTGAAGCC
AATTCACCTAAGTAGATTACCAGATGAGGAGTACAGCTACCTCTTTAAGGCACTAGCATTTGGAAGTGCCCACAGTGAGG
ACCACCCAAAGCTGACACTGTTAGCAGGAGAGTTCATCAAATTGTTAGACGGGTCATTTGTGGCAGCATATTCACTTACC
AATGGGTTGAGGACAAATCTAAGCCTTCAGTTCTGGCTCTCCATGTTGAAGAGATACAAGAATGTGACAAAGAACAACTT
GTCAATGTTTGGTGAGCATCCATCAGACCGTTTCAAAAAACGATGTGCAGTAGACTTCACCAACTTTCTTCCCTTCCCCC
GCTGCTCCACTACACCTTATGCCTCCTCGAACTGAAGCC------------AGGAAACTACCCAAGATAAGGATTGGAGA
GATCATTGAGAATCCCTCCCTTCATCCTAAGGGTGACTTTGTATTAGTGACATGGGAATCACAGATACCTCCTTATACCG
AGTTCAGTTACCATGTCCCGTATTGTGCTCAACAGCAGCCTAAAACAACCTTGCGGAGGAAAAGTGAAGCTACTATTTCT
CTCTAGTGTTCTTTTCTTT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>SNPs
SS-SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
----------S---S----------S------------------------S--------------S-SSS----S-----
---------------------------------------S-------------------S--------------------
-------------------------------------------------S--------S---------------------
-----------------------------------------------------S--------------------------
--------------------------------S--------------------------------S--------------
S--------------------------------------------------------------------S----------
--------S----------------------------------------------S------------------------
----------------------------S--------S------------------------------------------
S----S-------------------------------------------------S------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
------------------------S----------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------------------------------------S----------------
------------------S-----------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S--------------S--------------
---S-----------------------S---------------------------------S------------------
--------------------------S-S-------------------------------------------S-----S-
-------------------S--------------------S-------------------------------S-------
----SSSSSSS-----------------------------S-SS-----S--------------------------S---
-----------------------------------S----------------S-------SSS-----------------
---S-------SS------S-----S----------------------------S------------S-------S----
-------S-S---------------------------------------S--------------------S--------S
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_371
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CCAAGAACGCACTCAGTTGC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_1618
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CCTGAGCCTTCAATTCTGGC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_909
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CGTGCCAACGCTGGTATATG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_2898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GACGACTCACAACCAGCTCA-------------------------------------------
----------------------------------------------------------
