>input_sequence_63729
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----------------------------------ATGCGTCCACATGCATGTTCTTTGCTCGAGGTTCTCTTCCTCCATG
GGGGGTCTTGCTTTAGAATCCTTCCCGGGAACGCGTTTCTCTCTTTTATTTACTCTGCACC-------------------
--------------TGCATCCAAATGTCTTCCTCTGCTTCAGACTGTAAACTAACTCTGGCTTGCCGATGCTGGCGTGTT
-TGCTCTGCTGCAGAAGATCGTGGTGAAGCTGGAGCTCCATGACAACAAGGACAAGCAGAAGGCCATGAAGGCCGTCTCC
GTGCTCGTCGGTACGCACGCCGCACCCATCTCGTCCGCAGTCCGCACTGCTCTGCCTTTTTTCCCATGATGAATCCATTA
GTCAAAGACCACCAATCCACTGACTGACTGACGCCGACGGCTCTGCTTTCCTCTGTTCCGCGTTG-TTTATTTCGCCAGG
CATCGACGCCATATCCATGGACCTGGCGTCGCGCAAGATGACGGTGATCGGCACGGTGGACCCGGTGGACGTGGTGAGCA
AGCTGCGCAAGGGCTGGGCGGCCTACATCGAGTCCGTCGGCCCGGCCAAGGAGCCCGAGAAGAAAGAGGAGAAGAAGGAG
GAGGCCAAGAAGGAAGGCGGCGACGGGGCCAAGAAGGAAGGCGGCGACGGCGGCGACGCCAAGAAGGAAGGCGACGGCAA
GAAGGACGGCGACGGGAAGAAGGACGGCGATGGCAAGAAGGAGGAGGGCGACGGCAAGAAGGACGGCGACGGGAAGAAGG
ACGGCGACAAGAAGGAGGAGGGCGACGGCAAGAAGGACGACCAGAAGAAGCCCGCCGCCGTGGCCCCGCTGCCGTACCCG
CACCACATGCCGCTGCCGCACCACATGCCGCCGCCCTACATGTTCAACGCCGACTACATGATGAACCAGTACCGGCCGGC
GCCGCCGGCCTACCCGCCGCCGTACGTGCCGCCGCAGCACTACTACGTGCGGAACATGAGCATGGAGGAGAACCCAAACT
CGTGCGTCATCTGCTAA---------------------------------------------------------------
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>chr5A_1_TraesCS5A01G492100
CAGCTCGAATCATACGTTGGAATCACCTCGGAATCCGCAAAAACGAGACGGCCCGAATCGTCCCGTCCCGCTAGCATCCA
GCCGGA------------GCGCGCGCGCACGGCAGACACGAACCGGCCGGCCGGCCGGCGCGCACAGCGCCCGGAATCGA
CCTCTCGGGGGAGATAAAGCGAGCGTGACCGGTCACCGGTCGGTCACGCACAGCCCACGACGCACGCGCGC---------
--------GACAAGTCGAGTTGGTTTCGTCTCGGAGGACTTCATCCGGGAATCAGAATC----AGAGGCCGTACACCGGA
CCGGAGGCAGCGGCAGCCGAGGAGGGAAGCTAGCCAGCCAGCGCGCGGTGATGGGGCAAACCAGAGAGGAACTGGAATGA
TCGGGGGGCACGGCCGCGGGCT-------------------------------------------------------GCC
AGATCGCCTCGACTCGCCCTGTACTGTGCGCGCTGTGGGCGCGCGCGCAGTCGCGCA------------CGGCTGGCCGG
TGGCCGCACACCAAACCAAAAGGCGGGGAGACGTGCGAGGGCCGCCGGTGAGGAG----GAGGGACACATCCACATCAGA
TAGATATAGGTAGATAGATAGACGTACGCACTGGTCTGCGCTTCGCACCAACGCTACCTAGGCTAGCTAGCCACCAAAGC
T-----------GCCCGCCGATCGCACCTCCTCTCCTCTCCTCTCCTCGCCGCTAGTCTCTATTTAGGACCGCCCGCGAT
CACCAATTCCCTTTGCCTCTTGTGTGCCATCGCTGCAGTTGCGTGACACGCTCGCCTAACCTCCGCACCC----------
------CCTCCACCCTCCGCTGCC-GTGGCCGGCGGTACCGCACCA------------TTCCCACACACCCTCACTAGCT
TAGCTACT-CCGTTGTTCTCACCTATCCCATTTG-----ATCTTCTGACCGCCTACCCGCTCACCTTCTCC----CTGCG
AGAGACGGTGTGCAACCCAGGCCGGAGGCATGTCGGCCAAGGTGAGTGAGCAAGCGCGCTTCTTCTTCCCGTAATGTTCA
TGGATTGATTCTGAAATCCCTATCCTGATTCCATATGCGTCCACATGCATGTTCTTTGCTCGAGGTTCTCTTCCTCCATG
GGGGGTCTTGCTTTAGAATCCTTCCCGGGAACGCGTTTCTCTCTTTTATTTACTCTGCACC-------------------
--------------TGCATCCAAATGTCTTCCTCTGCTTCAGACTGTAAACTAACTCTGGCTTGCCGATGCTGGCGTGTT
-TGCTCTGCTGCAGAAGATCGTGGTGAAGCTGGAGCTCCATGACAACAAGGACAAGCAGAAGGCCATGAAGGCCGTCTCC
GTGCTCGTCGGTACGCACGCCGCACCCATCTCGTCCGCAGTCCGCACTGCTCTGCCTTTTTTCCCATGATGAATCCATTA
GTCAAAGACCACCAATCCACTGACTGACTGACGCCGACGGCTCTGCTTTCCTCTGTTCCGCGTTG-TTTATTTCGCCAGG
CATCGACGCCATATCCATGGACCTGGCGTCGCGCAAGATGACGGTGATCGGCACGGTGGACCCGGTGGACGTGGTGAGCA
AGCTGCGCAAGGGCTGGGCGGCCTACATCGAGTCCGTCGGCCCGGCCAAGGAGCCCGAGAAGAAAGAGGAGAAGAAGGAG
GAGGCCAAGAAGGAAGGCGGCGACGGGGCCAAGAAGGAAGGCGGCGACGGCGGCGACGCCAAGAAGGAAGGCGACGGCAA
GAAGGACGGCGACGGGAAGAAGGACGGCGATGGCAAGAAGGAGGAGGGCGACGGCAAGAAGGACGGCGACGGGAAGAAGG
ACGGCGACAAGAAGGAGGAGGGCGACGGCAAGAAGGACGACCAGAAGAAGCCCGCCGCCGTGGCCCCGCTGCCGTACCCG
CACCACATGCCGCTGCCGCACCACATGCCGCCGCCCTACATGTTCAACGCCGACTACATGATGAACCAGTACCGGCCGGC
GCCGCCGGCCTACCCGCCGCCGTACGTGCCGCCGCAGCACTACTACGTGCGGAACATGAGCATGGAGGAGAACCCAAACT
CGTGCGTCATCTGCTAAGTCAAAGTCTATCCCTCGATCGCTCGCGTACGTC----CCGTGGGGCGACCATGCATGCATCT
GTGTATAGTAGTATTTTCTCGATCGTTTTTACGAGACCAGCAAAGTTTGCAAGATGAAACTGTACACCTAGTAGTCGTCT
ACTATAGCACCACGCGTACGTACGTACATACGTACATTTGTAATGTGAAAATTGCGAGGCTACGTA----CCGCCTTCCC
TAGTACAT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
------CCACAGCTACATCATCTTTCCTTTCAACAACAGAGAACAAAACTAGAGAGAG-AAGAGTGGTTTACAGAGAGAG
AGAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGAGAGAGAGAGAGAGAG
AGAGAGAGAGCAGAGCAGTGTGCGGTGCATGATGGGCGGTGATGCAGCATGTGGCTGCAGTTCAAACTTTGCTTTCTAGA
AAAAGGGGAAAAGAGGCGCAATAATACGGTTATTTTTGGCATTTTGTCATGCAATTGTAGCCAGGCGCATCTTGCATGTG
CAACGCCATTGTACAGAATACTGTATATATATGGACCATGAGAATCAGCAGCCGTTGGAACGATCTCCCGCCCGTACAGT
TCCAGTTGGTGAGAATCGGAATTATGCTCACCCTGACCTGACCTGACCCAGCTAGCTGGATGCATCGCACTTATTTTTGT
TCTCTGTTTGTTCTTTGATCAACCA---------------------------GCATGCATGCATACGATTCACGTGCTGT
TTGAATTCAAAGGGGGACAAGAGTCCGTTGCACGTCAGAATAATGGAAGATCCATTTAGTCAGTGTGCTACAATTTCATC
ACTGGATTAATGAGAGAACGTCTTGAGGAAACTAAAACTGCACATGAGCATCTTCCCGCGAAAAAAGGAAGTGCACATGA
ACATCTTCCCGCCAGAAAAAGAACTGCACACCAGCATCTAACCCTAACTGGCTCGTTTCTACGAAAAAAATGGG-----T
GTAGCCATCAAGTGCGATGCACGCAGCCATCTTAATTATAATCAGTTCTCGCAAGGAAACAATTTGATTAGAA
>chr4D_1
CAGCTCGAATCATACGTTGGAATCACCTCGGAATCCGCAAAAACGAGACGGCCCGAATCGTCCCGTCCCGCTAGCTTCCA
GCCGGAGGAGGAGCGCGCGCGCGCGCACAAGGCAGACACGAACCGGCCGGCCGGCGC--GCACAGCA--CCGGGAATCGA
CCTCTCAGGGGAGATAAAGCGAGCGTGACGGGTCACCGGTCGGTCACGCACAGCCCACGACGCACGCGCGCGCGCGCACT
CGACGCGTGACAAGTCGAGTTGGTTTCGTCTCGGAGGAATTCATCCGCGAATCAGAATCAATCAGAGG----ACGCCGGA
CCGGCGGCGGCAACGGAGGAGGCAAGCT-------AGCCAGCGCGCGGTGATGGGGGAAACCAGATCGGAACGGGCGG--
TCGGGGCACACGGCCGCGTGGGGCGGACGCGGGCTGCCAGATCGGAGCGGGCAGCACAGCGGCAGCGCGGCATTCCCGCC
CGATCGCCTCGACCCACCGTGTACTGTGCGCACTGT----------------GCGCG------------CGGCTGGCCAG
TGGCCGCACACCAAACCAAAAGGCGGGGAGACGTACGAGGGCCGCCGGTGAGGAAGAGAGAGAGACACATCCACGTCAGA
CAGATATAGATAGATACAGTAGAGG--GCACTGGGCTGCGCTTCGCACCAACGCTACCTCGGCTAGCTAGCCACCAAAGC
TCCCGCCCGCCCG---------------------CCTCTCCTCTCCTCGCCGCTAGTCTCTATTTAGGACCACCCGCGAT
CGCCAATTCCCTTTGCCTCTTGTGTGCTGCCGCTGCAGTTGCGTGACACGCTCGCCTAACCTCCGCACCCCGTCGGGCCT
CTTTCCCATCCGTCCTCCGCTGCC-GTGGC----TGTACCGCACTGCCGCGCTCGCCGTTCCCACACACCCTCACTAGCC
A-----CTCCCATTATTCCCACCTGTCCCAGTTG-----ATCTTCCGATCGCCTGCCCGTTCACCTTCTCT----CTGCG
A----------GCAGCCCAGGCCGGAGGCATGTCGGCCAAGGTGAGCAAGAAA---CGCTCCTTCTGCTTGTAATGTTCA
TGGATTGATTCTGAAATTCCGATCCTGATTCCATATGCGTCCACATGCATGTTCTTTGCTCGAGGTTCTCTT-CTCCATG
GGGGATCTTGCTTTAGAATCCTTCCCGGGAACGCTTTTCTCT-TT----TTACTCTGCACCTGCACTTTGTTCTGGCGTC
GGTCATACAGTGCCTGCATCCAAACGCCTTCCTCTGCTTCGGACTGTAAACTAACTGTGGCTTGCCGATGCTGGCGTGTT
-TGCTCTGCTGCAGAAGATCGTGGTGAAGCTGGAGCTGCATGACAACAAGGACAAGCAGAAGGCCATGAAGGCCGTCTCC
GTGCTCGTCGGTACGTACCCCGCACCGCTCTGCTCTCTTCTGTTCTGCTAG---------------------ATCCATCA
GTCAAAGACCACCGATCGAATGACTGACTGACGCCGACGGCTCTGCTCTGCTCTGTTCTACATCGTTTTATTTCGCTAGG
CATCGACGCCATATCCATGGACCTGGCGTCGCGCAAGATGACGGTGATCGGCACGGTGGACCCGGTGGACGTGGTGAGCA
AGCTGCGCAAGGGTTGGGCGGCCTACATCGAGTCCGTCGGCCCGGCCAAGGAGCCCGAGAAGAAGGAGGAGAAGAAGGAG
GAGGCCAAGAAGGAGGGCGGCGACG---CCAAGAAGGAAGGCGGCGACGGCGGCGACGGCAAGAAGGACGGCGATGGGAA
GAAGGACGGCGACGGGAAGAAGGACGGCGA---GAAGAAGGAGGAGGGCGACGGCAAGAAGGACGGCGACGGGAAGAAGG
ACGGCGACAAGAAAGAGGAGGGCGACGGCAAGAAGGACGACCAGAAGAAGCCCGCCGCCGTGGCCCCGCTGCCGTTCCCG
CACCACATGCCGCTGCCGCACCACATGCCGCCGCCCTACATGTTCAACGCCGACTACATGATGAACCAGTACCGGCCGGC
GCCGCCGGCCTACCCGCCGCCGTACGTGCCGCCGCAGCACTACTACGTGCGGAACATGAGCATGGAGGAGAACCCAAACT
CGTGCGTCATCTGCTAAGTCAAAGTCGATCCCTCGATCGCTCGCGTACGTACGTTCCGTGGGGCGACCATGCATGCATCT
GTGTATAGTAGTATTTTCTCGATCGTTTTTACGAGACCAGCAAAGTTTGCAAGATGAAACTGTACAACTAGTAGTAGTCT
ACTATAGCAC------TACGTACGTACATACGTACATTTGTAATGTGGAAATTGCGATGCTACGTACTGCCGGCCTGCCC
TAGTACAT------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
TACATACCACAGCTACATCATCTTTCCTTTCAACAACAGAGAACAAAAGTAGAGAGAG-GAAAGAGTGGGTTT-------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------AGAGAGAG
AGAGAGAGAGCAG-----TGTGCGGTGCATGATGGGTGGTGATGCAGCATGTGGCTGCTGTTCAAACTTTGCTTTCTAGA
AAAAGGGAAATTGAGGCGCAATAATACGGCTATTTTTGGCATTTTCTCTTGCAATTGTAGCCAGGCGCATCTTGCATGTG
CAACGCCGTTGTACAGAATACTGTGTATATATGGACCAGGAGAATCAGCAGCCGTTGGAACGATCTCCCGCCCGTACAGT
TCCAGTTGGTGAGAATCGGAATTATGCTCACCCTGACCAGACCCCC-------AGCTGGACGCATCGCACTTATTTT-GG
TCTGTGTTCGTTGTTTGATCAACGCATGCATGCATATCTCACAAAAAAAAACGCATGCATGCATAAGATTCACGTGCTGT
TTGAATTCAAAGGGGGACAAGAGTCCATTGCACGTCAGAATAATC----------------AGTGTGCTATAATT---TC
ACTGGATCAATGGGCAAACGTCTTGACGAAACTAAAACTGCACATGAGAATCTTCCCGCGAAAGAAGGGAGTGCACATGA
ACATCTTCCCGCCAAAAAAAGAACTGCACACCAGCATCTAACCCTAACTGGCTCGTTTTTACGAAAAAA--GGG-----T
GTAGCCATCAAGTGCGATGCACGCAGCCATCT-AATTATAATCAGTTCTCGCAAGGAAACAATTTGATTAGAA
>chr4B_1
CAGCTCGAATCATACGTTGGAATCACCTCGGAATCCGCAAAAACGAGACGGCCCGAATCGTCCCGTCCCGCTAGCATCCA
GCCGGAA------------------CACAAGGCAGACACGAACCGGCGGTCCGGCGT--GCACACAGCGCCGGGAATCGA
CCTCTCACGAAAGATAAAGCGAGCGTGACCCGTCACCGGTCGGTCACGCACAGCCCACAACGCACGCGCGCGCACACACT
CGACGCGTGACAAGTCGAGTTGGTTTCGTCTCGGAGGAATTCATCCGGGAATCAGAATC----AGAGG----ACACCGGA
CCGGAGGCAGCGGCAACACAAACAGAGGAGGAGGAT----GGGCGCGATGGCGGGAGAAACCGGAGAGGAGCTCGAATGA
TCGGGGGGCACGGCCGTGTGGGGCGGACACGGGCCGCCAGATCGGAGCAGGCAGCAGAGCGGCAGCGCGGCATTCCCGCC
TGATCGCCTCGACTCACCCTGTACTGTGCGCACTGT----------------GAGCGCGCAGTCGCACACGGCTGGCCAG
TGGCCGCACACCAAACCAAAAGGCGGGGA--CGTACGAGGGCCGCCGGTGAGGAAGAGAGA----CACATCCACGTCAGA
CAGATATAGATCGATATAGAGGGCACCG----GGGCTGTGCTTCGCACCAACGCTACCTAGGCTAGCTAGCCACCAAAGC
GCCCGCCCGCCCGCCCGCCGATCGCCCCTCCTCTCCTCTCCTCTCCTCGCCGCTAG----TATTTAGGACCACCCGCGAT
CACCAATTCCCTTTGCCTCTTATGTGCCATTGCTGCAGTTGCGTGACACGCTCGCCTAACTCCCGCACGCAC--------
----CCCCTCCACCCTCCGCTGCCCGTGGCCGGCTGTACCGCACCA------------TTCCCACACACCCTCACTTAGC
TAGCTGCTCCCATTATTCTCACCTGTCCCCATTTGATCCATCTTCTGATCGTCTACCCGCTCGCCTTCTCTTTCCCTGCG
A----------GCAGCCCAGGCCGGAGGCATGTCGGCCAAGGTGAGCAAGAAA---CGCTTCTTCTCCCTGTAATGTTCA
TG----GATTCTGAAATTCCGATCCTGATTCCATA--------CATGCACGCTCTTTGCTG------------------G
GGGGATCTTGCTTTAGAATCCATCCCGGGAACGCTTTTCTCTCTT----TTACTCTGCACCTGCACTTTGTTCTGGTGTC
GGTCATACACTGCCTGCATCCAAACGTCTTCCTCTGCTTCGGACTGTAAACTAA-----------CGATGCTGGCGTGTT
TTGCTCTGCTGCAGAAGATCGTGGTGAAGCTGGAGCTCCATGACAACAAGGACAAGCAGAAGGCCATGAAGGCCGTCTCC
GTCCTCGTCGGTACGTACCCCGCAACGCTCTGCTCTTTTCTGTTCTGCTAG---------------------ATCCATTA
GACAAAGACCACCGATCGAATGACTGACTGACGCAGACGGCTCTGCTCTGCTCTGTTCCATGCCGTTTTACTTCGCCAGG
CATCGATGCCATATCCATGGACCTGGCGTCGCGCAAGATGACGGTGATCGGCACGGTGGACCCGGTGCACGTGGTGAGCA
AGCTGCGCAAGGGCTGGGCGGCCTACATCGAGTCCGTCGGCCCGGCCAAGGAGCCCGAGAAGAAAGAGGAGAAGAAGGAG
GAGGCCAAGAAGGAGGGAGACGGGG---CCAAGAAGGAAGGCGGCGACGGCGGCGACGCCAAGAAGGAGGGCGACGGGAA
GAAGGAGGGCGACGGGAAGAAGGACGGCGA---CAAGAAGGAGGAGGGTGACGGCAAGAAGGACGGCGACGGGAAGAAGG
ACGGCGACAAGAAGGAGGAGGGCGATGGCAAGAAGGACGACCAGAAGAAGCCCGCCGCCGTGGCCCCGCTGCCGTTCCCG
CACCACATGCCGCTGCCGCACCACATGCCGCCGCCCTACATGTACAACGCGGACTACATGATGAACCAGTACCGGCCGGC
GCCGCCGGCCTACCCGCCGCCGTACGTGCCGCCGCAGCACTACTACGTGCGGAACATGAGCATGGAGGAGAACCCAAACT
CGTGCGTCATCTGCTAAGTCAAAGTCGATCCCTCGATCGCGCGCGTACGTC----CCGAGAGGCGACCATGCATGCATCT
GTGTATAGTAGTATTTTCTCGACCGTTTTTACGAGACCAGCAAAGTTTGCAAGATGAAACTGTACAAC---TAGTAGTCT
ACTATAGCAC------TACGTACGTACATACGTACATTTGTAATGTGGAAATTGCGATGCTACGTACTGCCTGCCTGCCC
TAGTACATACCACAGCCACCCAACATTCGGTTACATCCAGGGTGCTAGCTTGTTTAGCACAAATGTGAGCCGAAACATTA
GCTGATCTCCCTACATGCTAAACTACAAAAGACTGAAAATAAATGACATGCTCCCTAATCTCGGCCAAGATAGACGCCAC
ACCCGCACGAACATTGGGACGCGTATTCCAGAGATTCACAATCTCCAAATTATCAGACTCGAAAACCACCTCAGAATAGC
CTCGTAGATGAGCAAAGAGAACACCATCGTGTAGAGCGAGTGCCTCGGCTATAAGAGGATCAGTGATTCCCGGGTCTTCT
TGTAACCAGTCTCTCAGCTGATTCAGCTGGAGCTGTTAGTGTTGAATAAAGAGCTCCCAAATTTCCCTGCAAAAAAAAAG
TACATACCACAGCCACATCATCTTTCCTTTCAACAATAGAGAACAAAACTAGAGAGAGAGAAAGAGTGGGTTTGGAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAGAGAGAGAGAG
AGAGAGAGAGCAG-----TGCGCGATGCATGATGGGTGGTGATGCAGCATGTGGCTGCTGTTCAAACTATGCTTTCTAGA
AAAAGGGAAATTGAGGCGCAATAATACGGTCATTTTTGGCATTTTCTCTTGCAATTGTAGCCAGGCGCATCTTGCATGTG
CAGCGCCATTGTACAGAATACTGTGTATATATGGACCATGAGAATCAGCAGCCGTTGGAACGATCTCCCGCCCGTACAGT
TCCAGTTGGTGGGAATCGGAATTATGCTCACCCTGACCAGACCCCC-------AGCTGGACGCATCGCACTTATTTT-GG
TCTGTGTTCGTTGTTTGATCAACGCATGCATGCATA-----------------------------CGATTCACGTGCAGT
TTGAATTCAAAGGGGGACAAGAGTCCGTTGCACGTCAGAATAATCGA------------TCAGTGTGCTGTAATT---TC
ACTGGATCAATGGGCAAACGTCTTGACGAAACTAAAACTGCACATGAGAATCTTCCCGCGAAAGAAGGGAGTGCACATGA
ACATCTTCCCGCCAAAAAAAGAAGTGCACACCAGCGTCTAACCCTAACTGGCTCGTTTTGACGAAAAAGGGGTGCATGAT
GTAGCCATCAGGCGAGATGCACACAGCCATCT-CATTATAATTAGT---------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------S--S-------------------------SSSS--S---------S--------
------S-------------------------------------------------------------------------
--------------------------------------S-----------------------------SSSS--------
-----------------S----SS--SSSSS--SS---------------------S-----------------------
------------------S-SS----------------------------------------------------------
S--------------S---------------S----SSSSSSSSSSSSSSSS----S---------------------S-
----------------------------------S-------------------S-------S-----------S-----
S--------S------S-S--SS-SS--------S---------------------------------------------
-------------------------S---------------------------------------------S--------
--------------------------------------------------------------------------------
----------------------------------S--------------------------------------------S
-----S-----S--S---------S-----S-----------------S---------------------S---------
-SSSSSSSSSS---S-------------------------------SS--S--SSS----------S--S----------
-----------------S--S---------------------------------------------------S-------
----S-----------------------------S----------SSSS-------------------------------
------------------------S---------------S---------------S-----------------------
--------------------------------------------------------------------------------
---------------S--S-------SS---SS--SSSSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSS--------
-------------S---S-S---------------------------S-S---------S---S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S----------SSS----------------------------------------S--------S--
------------------------------SSS-----------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
------------------------------------------------------------------S--------S----
----------SSSSSS-------------------------------S---------S-------------S----S---
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-----------------------------------------------------------S-S--S-SSSSSSS-SSSSSS
SSSS----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------SSSSS------------------S---------------------S---------------------
-------S--SS---------------------------------S--S-------------------------------
------------------------S-------------------------------------------------------
--------------------------------------S----SSSSSSSSSS-------S----------------S-S
---S----S---S----------SS-------------------------------------------------------
--------------------------------------------S--SSSSSSSSSSSS-----------S----SSS--
-------S----S-SS----------S---------------------S--------------S----S-----------
--------------S-------------------------------------------S----------SS---------
--------------------------------S----------------------------------------
>forward_279
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-------------------TTGGTTTCGTCTCGGAGGAC-----------------------------------------
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>reverse_1568
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-----------------------------------------------TTCCTCTGTTCCGCGTTGTT-------------
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>forward_1043
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---------------------------------------------------------------CTCACCTTCTCCCTGCG
AGA-----------------------------------------------------------------------------
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>reverse_3413
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----------------------------------------------------TAGCTGGATGCATCGCACTT--------
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