>input_sequence_63696
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TCCACGAGACACAATT-CCGAGC
TCTTCCGACTGACTGAA-----TCCATCTCCCATCTCCTCCATCGTTCCGCGGATCGCACAG---------ACACACCAG
CTCTCGTCGAGC-AGCCCATACCGGACTA------GCTAGCTGCCTGGCTAGCCCCGTGCCGATGGTTTCCTCGATGAAG
CACTGCAGAGATCAGGCCCAGGAGG------AGCCCTTGTCCCTCTCGCTCTCCCTCGGCGCCATGGCCGACCGCACCAA
GAAGCAGCGCCGCGGCGTCGCTGCCGGCGAGTTCGTGTGCAAGACGTGCAGCCGCGCCTTCCCGTCGTTCCAGGCGCTGG
GCGGCCACCGGACCAGCCACCTGCGCGGCCACAACGGGCTCGCGCTTGGCCTCGCTGCCGGGTCTGATCAGCCGG---GG
ACCAAGAAGACCACGGACCAGAAGCAGGCGCACCAGTGCCACGTCTGCGGGCTGGAGTTCGAGATGGGCCAGGCGCTCGG
CGGCCACATGCGCCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCAGGCGCCGCCCGTTCTGCTCCAGCTCTTCGTCT
AGCAC-TGCATCACCGATTTCTCTCAAGTTCA------A-----TAGCGAGGCATATCTAGTTCAAGTCCAGATTTACAG
GATCACCTATGTGCACGATTTGGTTTGTACATTTGCTGCACAATA---------GCTGGTCT-------------GCTCG
CTCATGTTATTACGTATATATGT--GTACATATTTT----AGGACTCATTCATTCGTTCATT-ACTGTTTACTGGTATTA
TCTATACT----TTATTGATTCATACATTTATTTTGTTCTACTTG----AATCGACTACGAGTTGAGTTAAT----CC--
ATGACGATCTCCCTCACACGGATTTTTTTTTCTTTGAAAAGGAGGCAGGCCGGG-TCTCG-------------TTGACAC
ACACAATTATTTTTAGTATAATAAAACTCTAGGTCATATGTAAAAAGCAGAAAAAAGAATTGTTGGCAAAGAGAAAAGGG
AGCATAAAATAGACAGCAGTTGTGTCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5A_1_TraesCS5A01G477600
CCCAACTCTGCCGCCGGCCGATTTTACCCAAAATCACCTCCGCTATCGCCCGCCTGTCCCCCTTTGCCTGCCTCGCCGGA
GTAGGGACGGCTGTCCCCGCAGCAGCCGATTCAATTTCGGCCGCCGCTTCGAATCAAAGCTTCTCCGGAGGTCGGGTTAC
TGTAATGGCTTCCATGGCGTGGTCGTGGACAGGCTACGCTTGTTCCTAGCCAAGACCCATCGACGGAGGTAGGAGATGCA
TGCCACGCCGCCCATCCGCCTGCCCGCCTCCGCCGTTCTTCCCGCCGTGCGAAGCCGGTTGCCCGCAACGCTGAGCTCCT
GCCGCCCCTCCGACGCTCCTCCGCCTCCCATACGCTGCTCCTCCTCTTCTCTCCGCCTCGAAACGTTGCTCCTTTGCCGC
TACCGCCGCCCCGATTCGCGTTGCCGTCGTCCCAATTCACCACCCCCGCAGCCCCTATGACGCTCCTCCGTGCCCCCCCA
CGCGCCGCCGCCGCTGACCTGACGCCGCCGCCCCGAATCGCGTCGTGCTGCCGCCGTCCCGATTCGGCCGCCGCCCACTA
ACAAAAGATATCAAAAATGAAAAAGTAAGAAGCATTTTTTAATGATGTAATTTTTGATGTCTTCTGTTTTACATCTATAA
TTTTACATCTTTTGTTGGATATGCTCTAAGCTTCCG-----TCCCCTTTCGCGGGCCCTTCCGTACGTCCAACCGCGTGT
GCG-------CTGCCTGGGGAGCAAGCTAA-CAATTGCTCTCAACTGAAGCACGAGAAGAGAAGAGAAAGTTCGTCCTTC
AAAAAAAAAAAAGAAGAGAAAGTTCGGCCTTTTCAAACACGCACTTTAGCCGGGTGGACGCCGATCGCGACTGGCTCCAC
GTCCGAAACCCCCCAGATGTCAACAACGACGTGGTGTACACGTGAGAACGCGCTTGGCTGCTACCACCTGCGAGTACGAG
TACTCCATCCCT----CTAGTATAAAAGGCCAACAATCCACGGAACACAACCACACATCCACGAGACACAATT-CCGAGC
TCTTCCGACTGACTGAA-----TCCATCTCCCATCTCCTCCATCGTTCCGCGGATCGCACAG---------ACACACCAG
CTCTCGTCGAGC-AGCCCATACCGGACTA------GCTAGCTGCCTGGCTAGCCCCGTGCCGATGGTTTCCTCGATGAAG
CACTGCAGAGATCAGGCCCAGGAGG------AGCCCTTGTCCCTCTCGCTCTCCCTCGGCGCCATGGCCGACCGCACCAA
GAAGCAGCGCCGCGGCGTCGCTGCCGGCGAGTTCGTGTGCAAGACGTGCAGCCGCGCCTTCCCGTCGTTCCAGGCGCTGG
GCGGCCACCGGACCAGCCACCTGCGCGGCCACAACGGGCTCGCGCTTGGCCTCGCTGCCGGGTCTGATCAGCCGG---GG
ACCAAGAAGACCACGGACCAGAAGCAGGCGCACCAGTGCCACGTCTGCGGGCTGGAGTTCGAGATGGGCCAGGCGCTCGG
CGGCCACATGCGCCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCAGGCGCCGCCCGTTCTGCTCCAGCTCTTCGTCT
AGCAC-TGCATCACCGATTTCTCTCAAGTTCA------A-----TAGCGAGGCATATCTAGTTCAAGTCCAGATTTACAG
GATCACCTATGTGCACGATTTGGTTTGTACATTTGCTGCACAATA---------GCTGGTCT-------------GCTCG
CTCATGTTATTACGTATATATGT--GTACATATTTT----AGGACTCATTCATTCGTTCATT-ACTGTTTACTGGTATTA
TCTATACT----TTATTGATTCATACATTTATTTTGTTCTACTTG----AATCGACTACGAGTTGAGTTAAT----CC--
ATGACGATCTCCCTCACACGGATTTTTTTTTCTTTGAAAAGGAGGCAGGCCGGG-TCTCG-------------TTGACAC
ACACAATTATTTTTAGTATAATAAAACTCTAGGTCATATGTAAAAAGCAGAAAAAAGAATTGTTGGCAAAGAGAAAAGGG
AGCATAAAATAGACAGCAGTTGTGTCGCAGGGCGGAAGTGATCATACATCAAGATGGTTTTCGGCCATGGTTATCTCGAT
GGTTACGTGTCTATGAATCTCCCCTGCAAAAAATATGTATGTACAAACCTAAAAAAGTTGTATGGAGCGGTGAGTTTGTT
GCGAGAAATGAGAGTTGTGGGCCGATTATCACGTTGTAGATCC---------GGAATGTGGTGATTATGTGTAGGGAGAG
CTCTGTGTTTCGAGCACCCAATATTTGGATCATCAGTATTCATGTCGAGAGGCATAGTACGTGGTATGTAGAGATAACGT
AGCAAGGAAGCATTTG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGATATATGT
TTGGGAGA----GCATGATTTTGATTTAAAAGCGTGCTTAGGTCTAACGAGGCAAGTAAGGAAATGAGTTGAATCACTGA
CTTACTTGTGGGCGCCAACATTTGTTTGAGAGAGGATGGATGAGACGCGATCACCAACTCCCATTTGGAGGTACTACAAG
GTCAATTTGCTGGCC-CACTTGTCGGCGCCATCATTTGCTTGAGAGAGGATGGACTCCCCTTTGAGGTACTAGGGGGTGA
ATTCGTTGGGCCACTTGTCGGGGCCTTCATCTATTCGAGGGAAGTAGAGAGACAAGGTACAGTTAATCAATCAACAACTC
CTCTTTTATCGCAACAAACATCGACAATTGTGGGCAAGGGCTTTTCGCCGAGCTTCCTCTCCTTCTTCAATTCTTCGAAT
TTTTGAAGGCATTTGTTAGCTTTTATTATTGCTCTAACTTCAGCCACTGCAGCAGAGTGTTGTTGTACTTTTGTTCCTAT
AAGCTTGAAAATCAATAAAGTAAACATAAAATCAGGATAAATCCCCTATGGTTTTCCTAAAAGAACATCGACAATGAAAA
TTGAGGCTGGTTCGATACGTTTTTATTTCTCTCTCACAAATACTCCAATAAGATGAACTTATGTAGCTCGAAAATTATAG
CATGAAAGCCTCTTTCGAGAGAAGAGAGCCAAGATCATACCATATGTCATGA
>chr5B_667
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TAAGCTTCCGTCCCATCCCATTTCGCGGGCCCTTCCGTACGTCCAACCGCGTAC
AGGT------CTACATGGGGAGCAAGCTAAGCAATTGCTCTCAACTGACGCACCAGAG-----GAGAA------------
---------------GAGAAGGTTCGGCCTTTTCAAACACGCACTTTAGCCGGGTCGACGCCGATCGCGACTGGCTCCAA
---------CCTCCAGACGTCAACAACGACGTGGTGTACACGTGACGACGCGCCTGGCTGCTACCACCTGCGAGTACTAG
TACTCCGTCCGT----CTAGTATAAAAGGCCAACAATCCACGGAACCCAACCACATCCACAGC-----CAATT-CCGAGC
TCTTCCGAGTCCCTGAA-----TCCATCTCTCATCTCCTCCATCGTTCC---------ACAG---------ACGCACGAG
CTCTCGTCGAGC-AGGCCATACCGGACTG------GCTA------------GCCGAGCTCCGATGGTTTCCTCAATGAAG
CAGTGCAGAGATGAGGCCCAGGAGG------TGCCCCTGTCCCTCTCGCTCTCCCTCGGCGTCATGGCCGACCGCAGCAA
GAAGCAGCGCCGCGGCGGCGCAGATGGCGAGTTCGTCTGCAAGACGTGCAGCCGCGCCTTCCCGTCGTTCCAGGCGCTGG
GCGGGCACCGGACTAGCCACCTCCGCGGCCGCCACGGGCTAGCGCTCGGCCTCACTTCAGGGTCCGATCAGCCGG---GG
ACCAAGAAGACGACGGACCAGAAGCAGGCGCACCAGTGCCACGTCTGCGGGCTGGAGTTCGAGATGGGGCAGGCGATGGG
CGGCCACATGCGCCGACACCGCGAGCAGGAGGCCGCCACCACGGCGCAGGCGCCGCCCGTTCTGCTCCAGCTCTTCGTCT
AGCAC-CG---CACTGATTTCTCTCAAGTTAC------A-----TAGCTAGGCATTTCTGGTTCTAGTAGAGATTTACAG
GTTGGCCTATGTGCGCGGTTTGGTTTGTACATTTGCTGCACACTACTGTAGCTCGTTGGTCT-------------GTTCG
CTCTTGTTAGG-----TATATAT--GCACATATTTT----AGGACTCATTCATTCGTTCATTTACTGTTTACTGATATTA
TCTACACT----TTATTGATTCGTACATATATTT-GTTCTACTCAACTAG------TACGAGTTGAGTTAAC----CATA
ATGACGATCTCCCTAACACGGATTTTCTTTTCTT-GAGAAGGAGGCAGGCCGGG-TCTCGGCATACGCATTGTTTGACAC
ACACAATTATTTTTAGTATAATAAAAATCTAGGTCGTATCTAAAAAGCGAAAAAAAA---TGTTGACAGAGAGAAAGGGA
AGCATAAAATAGACAGCAGTCGCATCACAGGGTGAAAGTGATCATACATGAAGATGGCTTTCGGCCATGGTTATCTGGAT
GGTTATGTTTGTATGCATCTCCCCTGCAAAAAATATGGATGTAAGAATCTAAAAA-GTTGTAT---GCTGTGAGTTTGTT
GCGAGAGATGGAACTTGTCGGCTGACCGTAACGTCGTAGATCT---------GGAATGTGGTGCTTATGTGCAGCGAGAG
CTCTGTGGTTTGGACACCCAATATTTGGGGCATCGATATTCATGTTGAGAGCCAAAGCACATGGTACGTAGAGATAACGT
AGCAAGCAAGATTTTATGTTGAGACTGCATCTCATGGCGTGGGCATCCTAGGTGTTATGTAAGTCCTCACCGGTGCTTCT
CCCACGGGTTCCGTCTTCGGCCCGGCCGGGTCTTGCCGCCCACTAGGCACTAGCTGACCTCTTGGCGCTTTCGGTGGGAG
TACATTGATCATGTCAAGTTTGGAGTTGCGCCCGTTCGGATGTGGTGCCTTGTGTCAGTCGTGACGCGGCGTGGGTATTC
TTAGCCCCGAGTCTCTTTGCCTTATGTGGCCGGAGGCCGGGCTAAGTGGATTTAGTTGTGTGTGTCCTCTACTTGGGTTG
AGCATCCCTCTTCCCCCGCTTCGGGTACCATTCTCGCGTCTCCTTACATCCATATAGTGTGTTGTACCATCTCTTGTACT
TTCTCTATTCTCTTTTATCATTGAAATGATATGCAAGCTTTGTGTATTCGCGAAAAGAAAGAATTTATGTTGAGATATGT
TTGGGAGA----GCATGATTTTGATTTAGTAGCGTGCTTAGGTCTAACGAGACAAGCAGGGAAAAGAGTTGAGTCACTGG
CTTACTTGTTGGTGCCAACATTTGTTTGAGAGAGGATGGACGGCCTGCAATCACCAACTCCCA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5D_667
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TAAGCTTCCG-----TCCCATTTCGCGGGCCCTTCCGTACGTCCAACCGCGTAC
ACAGCCTTGCCTACCTGGGGAGCAAGCTAAGCAATTGCTC-CAGCTGACGCACGACAAGAGGAGAGAA------------
---------------GAGAAGGTTCGGCCTTTTCAAACACGCACTTTAGCCAGGTC------------------------
---------------GACGTCAAGAGAGACGTGGTGTACACGTGACGACGCGCCCGGCTGCTACCACCTGCGAGTACTAG
TACCCCATCCCT----CTAGTACAAAAGGCCAACAATCCACAGAACCCAACCACATCCACAGC-----CAATT-CCGAGC
TCTTCCGAGTCCCAGAA-----GCCACCTCCCATCTCCTCCATCGTTTC---------GCAGTTCGCACAGACCTACGTA
GTACCATCG----AGCTCGTACCGGACCAGGACCAGCTA------------GCCGCGCGCCGATGGTTTCGTCGATGAAG
CACTGCAGAGATCAGGCACCGGAGG------TGCCTCTGTCCCTCTCGCTCTCCCTCGGCGCCATGGCCGACCGCTCCAA
GAAGCAGCGCC---GCGGCGCAGACGGCGAGTTCGTCTGCAAGACATGCAGCCGCGCCTTCCCGTCGTTCCAGGCGCTGG
GCGGCCACCGGACCAGCCACCTGCGCGCCCGCCATGGGCTCGCGCTAGGCCTCACTGGCGGGTCCGATCAGCCGG---CG
ACCAACAAGGCGACGGACCAGAAGCAGGCCCACCAGTGCCACGTCTGCGGGCTAGAGTTCGAGATGGGGCAGGCGCTGGG
CGGCCACATGCGCCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCAGGCACCGCCCGTTCTGCTCCAGCTCTTCGTCT
AGAAC-CG---CACAGATTTCTCTCAAGTTCA------A-----TAGCTAGGCATATC------------AGATTTACAG
GTCGACCTATGTGCGCGATTTGGTTTGTACATTTGCTGCGCACTA---------GTTGGTCTTGATCCTTGGCCCGTTCG
CTCATTTTATTAGGTATATATATACGTACATATTTTAGGGAGGACTCATTCATTCGTTCATTCATCACTG---------A
TCTATACT----TTATTGATTCGTACATTTATTTTGTTCTACTTGATTGAATCGACTACGAGTTGAGTTAAT----CTGA
ATGAAGTTGTCCCTAACACGAATTTTCTCTTCTT-GAAAAGGAGGCAAGCCGGG-TCTCGGCATATGCATTGATTGACAC
ACACAACTAGTTTTAGAATAATAAATATCTAGGTCATATGTAAAA-GCACAAAAGAAAATTGTGGGCAAAGAGAAAAG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5A_878
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CCTCAGACGTCAAGAGCGACGTGGTGTACACGTGACGCACCT------TGCTGCTATCTGCCAGTAGTAG
TACTCCATCCA------TAGAATAAAAGGCCAAAAATCCACGGAACCGAGCCACATCCACAGC-----CAATTCCCGAGC
TCTTCCGAGTGACTGAATCCATTCCACATCTCATCACGCCCATCGTTTC---------ACAATTCGCACAGACGCGCCAA
CTCTCGTTGAGCCAGCCCATATCGCATTT------GCCT----------------CGCGCCCATGGTCTCGTCAATGAAG
CACTGCAGATATCAGGCC---GAGG------TGCCATTGTCCCTCTCGCTCTCCCTCGGCGCCGTGACTGGACGGAACAA
GAAGACACGCC---GCAGTGCAGACGGCGAGTTCGTGTGCAAGACGTGCAGCCGCTCCTTCCCGTCGTTCCAGGCGTTGG
GCGGACACCGGACAAGCCACCTGCGCGGCCGCCACGGGCTCGCGCTCGGACTCGCCGCCGGGACCGATCTGCCGG---CG
ACCAAGAAGGCCACGGAGCAGAAGCAGGCGCACCAGTGCCACGTCTGCGGGCTCGAGTTCGAGATGGGGCAGGCGCTGGG
CCGCCACATGCGTCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCATGCGCCTCCCGTTCTGCTACAGCTCTTCGTCT
AGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>chr5A_923
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GGCTGCTATCACCTGCGACC---AG
TACCCCATCATCATCACTAGTATAAAAGGCCAACAATCCACGGAACCCAACAACATCCACAAC-----CAA---------
--TTCCGAGTCCCAGAA-----TCCACATCTCATCTCCTCCATCAGTTCCGCAGAT----------------CGCACGAA
CTCTCGTTGAGC-AGCTCATACCGGACTA------GCTAGCT--------AGCCGCGCGCTCATGGTTTTGTCTATGAAG
CACTGCAGAGATCAGGCCCAGGAGG------TGCCCTTGTCCCTCTCGCTCTCCCTCGGCGCCATGGCCGACCGCACCAA
GAAGCAGCGCCGCGGCGTCGCTGCCGGCGAGTTCGTGTGCAAGACGTGCAGCCGCGCCTTCCCGTCGTTCCAGGCGCTGG
GCGGGCACCGGACAAGTCACCTGCGCGGCCGCCACGGGCTCGCGCTCGGCCTTGCCGCCGGGATCAATGAGCCGTCGTCG
ACCAAGAAGACGGTGGACCAGAAGCAGGCGCACCAGTGCCACGTCTGCGGGCTTGAGTTCGAGATGGGCCAGGCGCTCGG
CGGCCACATGCGCCGGCACCGCGAGCAGGAGTCCGCCACCACGGCGCAGGCACCGCCCGTTCTGCTCCAGCTCTTCGTCT
AGCAC-CGCACTC---ATTTCTCTCAAGTTCA------ATACACTAGCTAGGCATATCTAGTTCTAGTCCAGATTTACAG
GTTGATCTATGTGCGCGGTTTGGTTTGTACATTTGCTGCACACTA---------GTTGGCCTTGATCGTTGT-CCGATCG
CTCATTTTATTAGGGA---------GTACATATTTT----AGGACTCATGCATTCGTTCATT-ACTC-------ATATTA
TCTATTGGTGCCTTCTTGATTCGTACATTTATTTTGTTCTACTTG----AATCGACTACGAGTTTGAGTTAATCGACCTA
ATGAAGACCTCCCTAACACGGATTTTCTTTTCTT-GAAAAGGAGCCAAGCCGTGATCTCGGCATATGCATCAATTGACAC
ACACAACTATTTCAGAAGT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GAATCTAAAAA-GTTATATGGAGAGGTGAGTTTGTG
GTGAGAGGTGGAACTGGCGGGCCGATTGTCACATCGTAGATTTGGAGTGTAGATGATGCGGTGATTATGTGTAGCGAGAG
CTCTGTGGTGGGGACACCTGATATTTGGAGCATTGGTATTCATGTTGAGAGGCATAGTACGTGGTATGTACACATAACGA
AGCAAGCAAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AATTTATGTTCAGATATGC
TTGGGAGAGCATGCATGATGTCGATTTCATAGCGTGCTTAGGTCTAACGAGC--------GAAAGGAGTTGAATCACTGG
CTCACTTGTCGGCGCCAACATTTGTATGAGAGAGGATGGATGAGACGCGATCACCAACTCCCATTTGAAGGTACTGCAGG
GTCAATTCGCTGGGCACATTTGTCGGCGCCATCATTTGTTTGAGAGAGGATGGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5B_1130
CTAGCCGCAGCAGAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGTTTCGTCGATGCGG
CAGTACACGGATCAGGCA---GAGGCGCCCTTGTCCCTCTCCCTCTCGCTGTCCCTCGGCGCCATCGCCGACCGCAGCAA
GAAGATGCGCC---GCGGCGCAGATGGCGAGTTCGTGTGCAAGACGTGCAGTCGCTCGTTCCCGTCGTTCCAGGCGCTGG
GCGGACACCGGACCAGCCACCTACGCGGCCGCAACGGGCTCGCGCTCGGCCTCGCTGCCGGATACGATCAGCCGG---GG
AGCAAGAAGATCACGGAGCAGAAGCAGGCGCACCAGTGCCACGTCTGCGGGCTCGAGTTCGAGACGGGGCAGGCGCTTGG
CGGCCACATGCGGCGGCACCGTGACGACGCGGTCGCCACCACGGCGCAGGCACCGCTCGTGCTGCTCCAGCTCTTCCTCT
AGCTGGTGTTCCATTGGTTTCTCTCCAGTTGGTTCAATA-----TAGGTAGGCA--------TCGAGTGCAGATTCACCG
GTTAACCTGTGTGCGCGATTGGATTTGTACATTTGCTACACA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5A_1140
GCC----------AT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGTTTCATCAATGAAG
CAGTACAGAGATCAGGCC---GATGCGCCCTCGCCCCTCTCCCTCTCTCTGTCCCTGGGAGTCGTCTCCGACAGCAGCAA
GAAGATGCACCGCGGCGGCGCGGACGGTGAGTTCGTGTGCAAGACGTGCAGCCGCTCCTTCCCGTCGTTCCAGGCTCTGG
GAGGACACCGGACCAGCCACCTCCGTGGCCGCCACTGCCTCGCGCTCGGCCTCGCTGCGGGGTCCGATCAGCCGG---GG
ACCAAGAAGACGGTGGACCAGAAGCAGGCGCACCGGTGCCACGTCTGCGGGATCGGGTTCGAGATGGGGCAGGCGCTTGG
CGGCCACATGCGCCGCCACCGCGAGCAGGAGGCCGCCACCACGGCGCAGGCGCCGCCCGTTCTGCTCCAGCTCTTCCTCT
AGCAC-TGCACCATCGATTTCTCTCAAGTTCA------A-----TAGCGAGGCATATCTAGTTCTAGTCCAGATTTACAG
GATCACCTATGTGCACGATTTGGTTTGCACATTTGCTGCACAATA---------GTTGGTCT-------------GCTCG
CTCATGTTATTAGGTATATATAT--GTACATATTTT----AGGACTCATTCATTCGTTCATT-ACTGTTTACTGATATTA
TCTATACT----TTATTGATTCATACATTTATTTTGTTCTACTTG----AATCGACTACGAATTGCGTTAAT----CCTA
ATGACGATCTCCGTAACACAGATTTTTTTTCCTT-GAAAAGGAGGCAGGCCGGG-TCACG-------------TTGACAT
ACACAATTATTTTTAGTATAATAAAACTCT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5A_1916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GTCATATGTAAAAAGTGGAAAAAAGAATTGTTGGCAAAGAGAAAAGGG
AGCATAAAATAGACGGCAGTTGTGTCACAGGGTGGAAGTGATCATGCATCATGATGGTTTTCGGCCATGGTTATCTGGAT
GGTTATGTGTGTATCAATCTCCCCTTCAAAAAATATGCATGTACGAACCTAAAAA-GTCGTATGGAGCGGTGAGTTTGTT
GCGGGAGATGGAACTTGTGGGCCGATTATCACGTCATAGATCT---------ATAATGTGGTGATTATGTGCAGGGAGAG
CTCTATGGTTCGAGCACCCAATATTTGGAGCA--AGTATTCATGTCGAGAAGCATAGTACATGGTATGTAGAGATAACAT
AGCAAGGAAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CATTTATGTTGCTATATGT
TTGGGAGA----GCATGATTTTGATGTAAAAGCGTGCTTAGGTCTAACGAAGCAAGTAAGGAAATGAGTTGAATCACTGG
CTTACTTGTCTGTGCCAACATTTGTTTGAGAGAGGATGGACGGCGTACAATCACCAACTCCCCTTTGGAGGCACGATAAG
GTGAATTCGCTGG-C-CATTTGTTGGCGCCATCATTTGTTTGAGAGAGGATGGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>SNPs
---SS-S-S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S--------------------------------SS
S-----------S-----------------------------------S------------S------SSSSSSSSSSSS
SSSSSSSSSSSSSSS-----S----------------------------------S-----------------------S
SSSSSSSSS--------S---------------------------SS------S-----------------------S--
----------------------------------------------S--------SSSS--SSSSSSS------------
--------S----------------------------------------SSSSSSSSS---------------S------
------------------------------------------SSSSSSSS----S--S----------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------------S-----------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------------------------------------------------S---------------
-------------------------------------------------------S------------------------
------------S--------S----------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------S-------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----S-------------------------------------------S---
-----S----S--------------------------S------S----------S------------------------
------S---SS-S--------------------S-------S-------------------------------------
-------S---------------------S--------------------------------------------------
----------SS---S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
---------S----------------------------------------------------------------------
-------S-----S----S-------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_223
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TCCTAGCCAAGACCCATCGA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_2107
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCAGGGCGGAAGTGATCATA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
