>input_sequence_63685
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CGCGAGAAAAA
A---ATAGTCCTCCATCGATTCGCCCGGCGGGTTCTCAG------ATGAAGACTACTGCCTTAGATGGCAGCTGCAGGTA
CATAAAAACGAGGGTTGTTTATTTGTGCTTTTATAAATAAAAAATTGAGCTGTTCATGCATGTATATTCCAGTACGCCTT
TTTCTTGCCT----ATTTACTACTGGCTCGTAGGGGTC-----TTCTTTGAGAGATCATTGGAT--GTTAATTTAGAATG
TTCATGTC--ATACACAGGACCAAATGCCAACCGAAGAATTCGACGAAGATGTTCTTATTTGTTTTCAAGCAGAAGGTTG
GGTCTCTAGTTTTTGGAAAAGATCACAAGGTTAGCAGACCAAAGAAGATGTTCAGGCTATGTATTCGTGACGAGTATGGC
ATGAGGGCGTTGGCTAAACCTACAGTTGTACTTAAGTCAACGGCACTGTACCACGAAATACAGCTTCGTGAGGGCAGATG
GAGGCTTGTCACGTTCATTGACGACCACATGATCCATACATGGCCGATTTATAGGGAAAAATACGGACCAATTGGAAAAG
CATCCTGCACAATAAACAATGCGCTTAGAAAATACAGCGAGCGTCGACTTGAAGCTGGTTTGTTTTATTTGGTCAGGGAC
AAGAAACGTTACTTGTCATTTACAACTAGGAGTCACCTGTACGGTGACGA---ATTCTTGAAGGGTCTATGGAGAAAGAA
AAG-ACTGG-AGCGAACCATGCAAAAACATAATCAAGAGTTATTAACGTGTTCTGCAAGTGTCTCCGAAACCAATATACC
TGAAGACAGAAACCTTTTCTCCATACTCATCACGACATTGAGAGTGTGCGGCATGAGACATGTGTTTTACATGTTGCTTG
TTATCTCCTTAGCTTTGGCGATTGTATATCT--GTGAAAGATCATTCATTGTATCTTGGTTGACTTAGTACTATATATGC
ATAAGGTGTGAATCGTATTTT--TCTCTCATGGGTTCGCTAACGAATAAT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr2D_1_TraesCS2D01G353800
TCGTATCCATCCTGTTTTCCACGTGTCACAGCTGAAGCCCTTCACACCAGATTACTCGCCGGTTTTCTCGGAGCTGCCC-
GCACACCGGACCTCACCGCGGGTCCACTCCAACCTGTCGCCATCTTGGATCGCCGCATGGTCAAGAAAGGAAACAACCCC
GTGGTCCAGGTACGCGTTCAGTGGTCCTCGCTCTCTACGGAGTCTGCAACCTGGGAAGATTACAATGTGTTGGGCCATCG
CTACCCGACGGCACCATGCTGGACCGACGACGCTGCAGCTCATGGAGGGGCAACTGTCACACCTGATACAAGTGTATCGG
TGGACACATGAGAGATGAGGAGAGCAACCTAGGTGTAGGTAATTTGGGCCGAGGCCTCTGGGGTTTATTGGGCCGCCTGT
GGCCTGTGTGTGTGAGCTACATAAACCAGTCTGTAATCCCTGGATCGATATGGAATAAGATAACTCTGGTTTCCCTTCTC
CCCTTGTCTTCGTCTATCTCTCTCTGCTCTCCTCACCTAACCCGATTACCCTTCTCCCCCTGTGCGATCGATCCCTCTAG
AGTTCATCGGTCGTCACAGCCCCACGCAACCTCGCGTGAGCTCCCAGTCGCTGCGCCGCTGACGAACAGCCGCAGCAGCA
CGAACGGAACGGCCATGGCTCTGCGTGTACGCGTGTGCTGTTCTGGTCTCTTGTGTTGGATGCGCCACGGCCCCACGGGC
GTGCGTGTGTACGTTGGTTTTCTATAGTTTCAGTTTTCCTGTTCGTACACGTCCTATGATTCTCCTATCACGCGCAGGCT
TCG--------------------------GTACAAAAAGAGAACTAACCTATCACGCGCAGGCTTCCGTACCAGATCATT
GATGTGCTTCTAATCCGACTCGTCTGATTGAAAGTAGGGGGTCAATAGTCTGATTCGGGCGTATGTGCCCTTCCTTAAAT
ATTAGAGAGGCAAGAACAAAACGTGTTATTATAACA--AAAGGGCTTCTTAATTAGTCCTCCGTTCTCCCGCGAGAAAAA
A---ATAGTCCTCCATCGATTCGCCCGGCGGGTTCTCAG------ATGAAGACTACTGCCTTAGATGGCAGCTGCAGGTA
CATAAAAACGAGGGTTGTTTATTTGTGCTTTTATAAATAAAAAATTGAGCTGTTCATGCATGTATATTCCAGTACGCCTT
TTTCTTGCCT----ATTTACTACTGGCTCGTAGGGGTC-----TTCTTTGAGAGATCATTGGAT--GTTAATTTAGAATG
TTCATGTC--ATACACAGGACCAAATGCCAACCGAAGAATTCGACGAAGATGTTCTTATTTGTTTTCAAGCAGAAGGTTG
GGTCTCTAGTTTTTGGAAAAGATCACAAGGTTAGCAGACCAAAGAAGATGTTCAGGCTATGTATTCGTGACGAGTATGGC
ATGAGGGCGTTGGCTAAACCTACAGTTGTACTTAAGTCAACGGCACTGTACCACGAAATACAGCTTCGTGAGGGCAGATG
GAGGCTTGTCACGTTCATTGACGACCACATGATCCATACATGGCCGATTTATAGGGAAAAATACGGACCAATTGGAAAAG
CATCCTGCACAATAAACAATGCGCTTAGAAAATACAGCGAGCGTCGACTTGAAGCTGGTTTGTTTTATTTGGTCAGGGAC
AAGAAACGTTACTTGTCATTTACAACTAGGAGTCACCTGTACGGTGACGA---ATTCTTGAAGGGTCTATGGAGAAAGAA
AAG-ACTGG-AGCGAACCATGCAAAAACATAATCAAGAGTTATTAACGTGTTCTGCAAGTGTCTCCGAAACCAATATACC
TGAAGACAGAAACCTTTTCTCCATACTCATCACGACATTGAGAGTGTGCGGCATGAGACATGTGTTTTACATGTTGCTTG
TTATCTCCTTAGCTTTGGCGATTGTATATCT--GTGAAAGATCATTCATTGTATCTTGGTTGACTTAGTACTATATATGC
ATAAGGTGTGAATCGTATTTT--TCTCTCATGGGTTCGCTAACGAATAATCGTGAAGTCATTGTGTAGTGATGTTATGAT
GTACTTGTACTACAGTCTGAGAATATATTTGGTGCTACCATGCTCTATACAATGATGGCACAACAAAACATTTGCCCAAA
ATTTCAAAAGAAGAGAGTGTGGTTGGTACAAGCCATGTACTACATCAGTAAAGCCTCTATTTCTCATATAGATAGATTTT
GCTTGTTTTGGGTAGTTTAGGCTTCCGGGGAATTTTTTAGGAGGCACTAATGCAATGGCCACAATTATCGAGTTTCCAGT
GTACTCGGCAAAGCACAGAAAAAACCCGGCATTTCGTTTGCTAAGTTCTGTTCTTGGCAAACAGGACTCGGCTGGACACA
CATCGACAATCATTTACTCCGCCGAGTTATTATCAGGCACTCGACAAACACTTAAATAGTACTCCCTCCGTTTCAAAATA
TAAATCTTTGTAGAAATTTCAATACGTGACTACATACGGAGCAAAATGAATGAATCTACACTCTAAAATATGTCTACATA
CATCCGTATGTTGTATACCATTTGAAATGTCTAAAAAAACTTATATTTTGGAATGAAGGAAGTAATTGCCAAGTTTTGGC
AAATGAGAACACGGCAAACCATCATGTTAGATGGAATGACCGTTTAATGGGCATTCATGTGGCCAGACCTTTGTCGAG--
---TCCTCGTCCTCGTCCGACCAAACTCG-G--CAACCCATCAACGAGTAGGGGCTCAACACGTGGCACGTCCGTTTGTT
GAGTTGTTGTTTGTTGAAACTTGGCATAGCTTTGACGAGTGTGGTATTCCGCAGAGCTTTGACGAGCAACTTCTCAACGT
ATGCACAAGCTTATGCCAAGTTTTGGTCCGATGAAACTCTCCAATACGAGTAGATGCTAGATTTGTTAATATTACTTGTT
ATCTTGTTGTTTTTATTTATTCAAATTTAAAATATATTTCTACCATTCATATTATACATATCACTATAGGAATCAGGAAC
TTTTCCGTCCGCCACGGC
>chr2B_1
TCGTATCCATCCTGTCTTCCACGTGTCACAACTGAAGCCTTTCACACCAGATTACTCGCCGGTGTTCTCCGAGCTGCCCC
GCACACCGGACCTCACCGCGGCTCCACTCCAACCTGTCGCCATCTTGGATCGCCGCATGGTCAAGAAAGGAAACAACCCC
GTGGTCCAGGTACGTGTCCAGTGGTCATCGCTCTCTACGGAGTCTGCAACCTGGGAAGATTACAGTGTGTTGCGCCATCG
CTACCCGACGGCGCCATGCTGGACCGACGACGCCGCAACTCATGGAGGGGCAACTGTCACACCTGATACAAGTGTATCGG
TGGACACAGGAGAGGTGAGGAGAGCAGCCTAAGTGTAAGTG--TTGGGCCGAGGCCTGTGCGGGTTATTGGGCCGCCTGT
GGCCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GTATG-GGTGTACTAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ATAAACCAGTC----------------------------------------------------------
-----------------------------------------------TGT---AATCCTGGATCGGGTATGAAATGAGAT
AAC-ACTGG-AG--------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCTCTCTCTCTCGTTCCCCTTCGTCCACCTTCCTCCCTGCTCTCCTCACCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACCTCTATTCCC--
---CCCCT------GTGCGATCGATCCCC-TCCCTAGGGTTCATCGGTCGTCACA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr2A_1
TCGTATCCATCTTGTCTTCCATGTGTCACAGCTGAAGCCTTTCACACCAGATTACTCGCCGGTGTTCTCCGAGCTGCCCC
GCACACCGGACCTCACCGCGGCTCCACTCCAACCTGTCGCCATCTTGGATCGCCGCATGGTTAAGAAATGAAACAGCCCC
GTGGTCCAGATACGCGTCCAGTGGTCATCGCTCTCTACGGAGTCTGCAACCTGGGAAGATTACAATGTGCTGCGCCATCG
CTACCCAGCGGCACCATGCTGGACCGACGACGCTGCAGCTCATGAAGAGGCAACTGTCACACTTGATACAAGTGTATCGA
TGAACACATGAGAGGTGAGGAGAGCAGCCTAAGTGTAAGTG--CTGGGCCGAGGCCTGAGTGGGCTATTGGGCCGCCTGT
GGCCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GTGTGTGGTGTGCTAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ATAAACCAGTC----------------------------------------------------------
-----------------------------------------------TGT---AATTCTGGATCGGTTATGAAATGAGAT
AAC-ACTGGAAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCTCTCTCTCTCGTTCCCCTTCGTCTATCTCCCTCCCTGCTCTCCTCACCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------A-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr7D_1
TCGTATCCATCCTGTCTTCCATGTGTCACAGCTGAAGCCGTTCACGCCAGATTACTCACCAGTTTTGTCTGAGCTGCCCC
GCACACCTGACCTCACCGTGGCTCCACTCCAACCTGTCGCCATCTTGGATCGCTACATGGTCAAGAAGGGAAACAACCCC
GTGGTACAGGTACGCGTTAAGTGGTCATCGCTCTCTATGGAGTCTGCAACCTGGGAAGATTACAATGTGATGCGCCATCG
CTACCCAGCGGCACCATGCTGGACCGAAGACACTGTAGCTCATGGAGGGGCAACTGTCACACCTGATACAAGTGTATCGG
TGGACACATGAGAGGTGAGGAGAGCAGTCTAGGTGTAGGTAAAATGGGCCGAGGCCCGTGGGGTTTATTGGGCCGCTTGT
GGCCTGTGTGAGAGCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACAATAAACCAGTG----------------------------------------------------------
-----------------------------------------------TGT---AATCCTAGTTTTGATATGGAATGAGAT
A---ACTCT-AG--------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTTCCCCTTCTCCCCTGTCTTTGTCCATCT--CTCTGTGCTCTCCTCACCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACCCCAATTCCCCT
TCTCCCCT------GTGCGATCGATCCCC-T--CTAGGGTTCATCGGTCGGCACAG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr1A_1
TCGTATCCATCCTGTCTTCCATGTGTCACAACTGAAGCCTTTCACACCAGATTACTCGCCGGTGTTCTTCGAGCTGCCCC
GCACACCGGACCTCACCGCGGCTCCACTCCAACCTGTCGCCATCTTGGATCGCCGCATGGTCAAGAAAGGAAACAACCCC
GTGGTCCAGGTACGCGTCTAGTGGTCATCGCTCTCTATGGAGTCTGCAACCTGGGAAGATTACAATGTGTTGCGCCATCG
CTACCCGGCGGCACCATGCTGGACCGACGATGCTGCAGCTCATGGAGGGGCAACTGTCACACCTGATACAAGTGTATCGG
TGGACACATGAGAGGTGAGGAGAGCAGCCTAAGTGTAAGTG--CCGGGCCGAGGCCTGGGTGGGCTATTGGGCCGCCTGT
GGCCAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TGTGTGGTGTGCTAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ATAAACCAGTC----------------------------------------------------------
-----------------------------------------------TGT---AATTCTGGATCGGGTATGAAATGAGAT
AAC-ACTAGAAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCTCTCTCTT--GTTCCCCTTTGTCTACCTTCCTCCCTGCTCTCCTCACCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACCTCTATTCTT--
-----CCC------GTGAGATCGATCCCC-TTCCTAGGGTTCATCGGTCGTCACA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr1B_1
TCGCATCCACCCAGTTTTCCATGTGTCACAGCTGAAGCCTTTCACACCGGACTACTCGCCGGTCTTCTCCGAGCTGCCTC
GTGCGGCAGACCTCACCGCGGCTCCCCTCCAACTCGTGGCCATCCTGGATCGACGGATGGTCAAGAAAGGCAACAGCTCG
GTGGTTCAGGTGCGCGTTCAGTGGTCATCTCTTTCTCCAGCATCCGCAACATGGGAGGACTACAACGTGATGCGCCTTCG
CTATCCTACGACACCTTGATGGAAGGACGACGCTGCCGCTCAAGGCGGGGCATCTGTCACACCTGATACAAGTGTATCGG
TGGACATGTAATAGGTGAGGAGAGTAATTGGGCCAGAAGC-AAGTGGGCTGGAGCCCGTGGATGTAAT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GGGACGCGTGTGGC
CTGGAGTGGGGTACTTAACCTAGCGT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GT---ATCACTGGACTGGTTATGCAATGAGAG
AAT-ACTAGACG--------------------------------------------------------------------
--------------------------------------------------------------------------------
-ACTCTGTTCTCA--TCTCCTTCGTCTTCCTCCCT-CCTGCTCTCCTCACCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACCCCCCTTTTCCC
TT-----C------GTGCGATCGATCCCTTTCCCTAGGGTTCATCGGTCGTC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr2A_578
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GCCCCACGCAACCTCGCGTGAGCTCCCGGTCGCTGCGCCGCTGACGAACAGCCGCAGCAGCA
CGAACGGAACGGCCATGGCTCTGCGTGTACGCGTGTGCTGTTCTGGTCTCTTGTGTTGGATGCGCCACGGTCCCACGTGT
GTG--------CGTTGGTTTTC--TAGTTTCAGTTTTCCTGTTCGTACACGTCCTATGATTCTCCTATCACGCGCAGGCT
TCC--------------------------GTACAAAAAGAGAACTAACATATCACGCGCAGGCTTCTGTACCAGATCCTT
GATGTGCTTCTAATCCGACTCATCTGATTGAAAGTAACGGATCAATAGTCTGATTCGGGCGTATGTGCCCTTCCTTAAAT
ATTAGAGAGGCAAGAACAAAACGTGTTATTATAACACAAAAGGGCTTCTTAATTAGTCCTCCGTTCTCCCCCGAGAAAAA
A---ATAGTCCTCCATCGATTCGCCGGCCGGGTTCTCAG------ATGAAGACTACTGCCTTCGTTGGCAGCTGCAGGTA
CATAAAAACAAGGGTTGTTTATTTGTGCTTTTATATTTTT----TTGAGCTGTTCATGCATGTATATTCCAGTACGCCTT
TTTCTTGCCT----ATTTACTACTGGCTCGTAGGGGTC-----TTCTTTGAGAGATCATTGAAT--GTTAATTTAGAATG
TTCATGTC--ATACACAGGACCAAACGCCAACCGAAGAATTCGACGAAGATGTTCTTATTTGTTTTCAAGCAGAAGGTTG
GGTCTCTAGTTTTAGGAAAAGATCACAAGGTTAGCAGACCAAAGAAGATGTTCAGGCTATGTATTCGTGACGAGTATGGC
ATGAGGGCGTTGGCTAAACCTACAGTTGTACTTAAGTCAACGGCACTGTACCACGAAAGACAGCTTCATGAGGGCAGATG
GAGGCTTGTCACGTTCATTGACGACCACATGATCCATACATGGCCGATTTATAGGGAAAAATACGGACCAATTGAAAAAG
CATCCTGCACAATAAACAATGCGCTTAGAAAATACAGCGAGCGCCGACTTGAAGCTGGTTTGTTTTATTTGGTCAGTGAC
AAGAAACGTTACTTGTCATTTACAACTAGGAGTCGCCTCCATGGTGATGA---ATTCTTGAAGGATCTATGGAGAAAGAA
AAG-ACTGG-AGCGCACCATGCAAAAACATAATCAAGAGTTATTAACGTGTTCTGCAAGTGTCTCCGAAACCTACATACC
GGAAGACAGAAACCTTTTCTCCATACTCATCAGGACATTGAGATTGTGTGGCACGAGACATGTGTTTTACTTGTTGCTTG
TTATTTCCTTAGCTTTGGTGATTGTATATCT--GTCAAAGATCATTCATTGTATATTGGTTGACTT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr2B_581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CCACGCAACCTCGCGTGAGCTCCCAGTCGCTGCGCCGCTGACGAACAGCCGCAGCAGCA
CGAACGGAACGGCCATGGCTCTGCGTGTACGCGTGTGCTGTTCTGGTCTCTTGTGTTGGATGCGCCACGGCCCAACGGGC
GTGCGTGTGTACGTTGGTTTTC--TAGTTTCAGTTTTCCTGTTCGTACACGTCCTATGATTCTCCTATCACGCGCAGGCT
TCC--------------------------GTACAAAAAGAGAACTAACCTATCACGCGCAGGCTTCCGTACCAGATCATT
GATGTGCTTCTAATCAGACTCGTCTGATTGAAAGTAGGGGATCAATAGTCTGATTCGGGCGTATGTGCCCTTCCTTAAAT
ATTAGAGAGGCAAGAACAAAACGTGTTATTATAACA--AACGGGCTTCTTAATTAGTCCTCCGTTCTCCCGCGAGAAAAA
AAAAATAGTCCTCCATCGATTCGCCGGCCGGGTTCTCAG------ATGAAGACTACTGCCTTCGATGGCAGCTGCAGGTA
CATAAAAACGAGGGTTGTTTATTTGTGCTTTTATAAATAAAAAATTGAGCTGTTCATGCATGTATATTCCAGTACGCCTT
TTTCTTGCCT----ATTTACTACTGGCTCGTAGGGGTC-----TTCTTTGAGAGATCATTGGAT--GTTAATTTAGAATG
TTCATGTC--ATACACAGGACCAAACGCCAACCGAAGAATTCGACGAAGATGTTCTTATTTGTTTTCAAGCAGAAGGTTG
GGTCTCTAGTTTTTGGAAAAGATCACAAGGTTAGCATACCAAAGAAGATGTTCAGGTTATGTATTCGTGACGAGTATGGC
ATGAGGGCGTTGGCTAAACCTACAGTTGTACTTAAGTCAACGGCACTGTACCACGAAATACAGCTTCGTGAGGGCAGATG
GAGGCTTGTCGCGTTCATTGACGACCACATGATCCATACATGGCCGATTTATAGGGAAAAATACGGACCAATTGGAAAAG
CATCCTGCACAATAAACAATGCGCTTAGAAAATACAGCGAGCGTCGACTTGAAGCTGGTTTGTTTTATTTGGTCAGGGAC
AAGAAACGTTACTTGTCATTTACAACTAGGAGTCACCTCTACGGTGATGA---ATTCTTGAAGGACCTATGGAGAAAGAA
AAG-ACTGG-AGCGAACCATGCAAAAACATAATCAAGAGTTATTAACGTGTTCTGCAAGTGTCTCCGAAACCAACATACC
TGAAGACAGAAACCTTTTCTCCATACTCATCAGGACATTGAGATTGTGTGGCATGAGACATGTGTTTTACTTGTTGCTTG
TTATCTCCGTAGCTTTGGCGATTGTATATCT--GTGAAAGATCATTCATTGTATCTTGGTTGACTTTGTACTATATATGC
ATAAGGTGTGAATCGTATTTCTCTCTCTCATGGGTTCGCTAACGAATAATCGTGAAGTCATTGTGTAGTGATGTTATGAT
GTACTTGTACTACAGTCTGAGAATATATTTGGTGCTACCATGCTCTATACAATGATGGCACAACAAAACATTTGCCCAAA
ATTTCAAAAGAAGAGAGTGTAGTTGGTACAAGCCATG---TACATCAGTAAAGCCTCTATTTCTCGTACAGATAGATTTT
GCTTGTTTTGGGAAGTTTAGGCCTCCGGGGAATTTTTTAGGAGGCACTAATGCAATGGCCGCGATTATCGAGTTTCCAGT
GTACTCGACAAAGCACAGAAAAAACTCGGCATTTCGTTTGCTAAGTTATGTTGTTGGCAAACAGGACTCGGCTGGACACA
CATCGACAATCATTTACTCCGCCGAGTTATTATCAGGCGCTCGACAAACACTTAAAT-----------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AGTAATTGCCAAGTTTTGGC
AAATGAGAACACGGCAAACCATCATGTTAGATGGAATGACTGTTTAATGGGCATTCATATGGCCAGACCTTTGTCGAG--
---TCCTT------GTCCGACCAAACTCC-G--CAACCTATCAACGAGTAGGGGCTCAACACGTGGCACGTCCTTTTGTT
GAGTTGTCGTTTGTTGAAACTTGGCATAGCTTTGACGAGTGTGGTATTTCGCAGACCTTTGACGAGCAACTTCTCGACGC
ATGCACAAGCTTATGCCAAGTTTTGGTCCGATGAAACTCTGCAATATGAGTAGATGCTAGCTTT----------------
--------------------------------------------------------------------------------
------------------
>chr2D_712
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CCACGGGC
GTGCGTGTGTACGTTGGTTTTC----------------CTGTGCGTACACGTCCAATGAAACTAACCTCCCCTAAAAAGA
AAAACAAAGAAACTAACCTACCCTAAAAAGAAAAACAAAGAAACTAACCTACCACGCGTAGGAG----------------
--------------------------------------------------------------------------------
--------------------------TATTAGTAGA--CGAGGGCTTCCTAGT---------------------------
-----TAGTCCTCCATCGATTCGCCGGGTTCTTTGCATGATGCATATGAAGACTACTACCGTCGATGGCAGCTGCAGGTA
CATACGAACGAGGGCTGTTTATATGTGTTTCTATT------------AGCTGTTCGTGCATGCATACTCTAGTACACTTT
TTTTTCTTACTTGCATATACTACTAGCTCCTAAGGGTTTTGTTTTCTTTGAGAAATCATGTGATGCATTAATTTAGGATG
CTCATGTC--ATACCCAGGATCAAACGCCAACCGAAGATTTTGACCAAGACGTTCTTATTTATTTTGAAACAGAAGGTCG
GATCTCTAGTTTTTGGAAAAGACCACAAGGTTATCAGGCCAAAGAAGACGTTCAGGCTATGTGTTCGTGACGAGTATGGC
ATGAGGGCATTGGCTAAACCTGCAGCTGTACTTAAATCAACGGCACTGCGCCACGAATTGGAGCTATGTAACGAGAGATG
GGGGATTTTTGCGTGGATTCACGTGTGGTCGATCAATTCATGGCCGGTTTATATAGAAAATTACGGAATCATTGGAAAAC
TGTCATGCACAATAAAGAGGGCAATTGCAAAGTACAGAGAGCGCCGCTTTGAAACCGGATTATTTTATTTTGTCCCGGAC
AAAAAAC---ATTTGACATTCACAGTTAGCAGTTACCTCTACGGAGATGATGAGTTCTTAAAAGATCTGTGGAGGAAAAA
GAG-ACTAG-AGCGCAGCATGAGAGAGAAAAATCAGGAGTTACACAAGTGTTCCACATGTTTTCAAATCTTCCGTATCA-
-GAGTATAGAAATATTTCTTTCATAGCTGTCAGAACATTGAGATTGTGTGGCATGGGATATTTGTTTTACTTGGTGCTTG
TGATCTCCTTAGCTTTGGCGATTGTATATCT--ATGAAAGATCG----TTGTTTCCTTGTTGACTTGTAGTATATTTGCC
ATAAGGTGTGAACCATATTTT--T--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr2D_1197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTCTTTGAGAAATCATGGGAT--ATTAATTTACGATG
CTCATGTCATATACCCAGGATCATACGCCAACCGAAGATTCCGACGAAGACGTTCTTATTTATTTTCAAGCAGAAGGTTG
GGTCTCTACTTTTTGGAAAAGATCACAAGATCATCAGACCAAAGAAGATGTTCAGGCTATGTATTCGTGACGAGTATGGC
ACGAGGGCATTGGCTAAACCTGCAGCTGTACTTAAGTCAACGGCACTACGCCACGAAATCGAGCTTTGTACGGGAAGATG
GCGGCTTATAACGATGGTTAAGTTGGGCAAGATCAACTCATGGCCGGTTAATATGGAAAGTGGTGAAATCATTAAAAATC
TGTCATGCACCATAGACGGTACGATTATAAAGTATAGAGAGCGCCGCTTTGAAGCCGGATTGTTTTATTTGGTCTCA---
AACAAAT---ATTTGACACTCACAGTTAGAAGTTACCTCTATGGTGATAGCGAATTCTTAAGGGACCTGTGGAGAAAAAA
AAGCACTAG-AGCGTACCATG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>SNPs
---------------------------------------S-----------------------------S----------
---------------------S----------------------------------------------------------
--------------------------S---------------------------------------------S-------
--------------------------------------------------------------------------------
--------------S---------------------------S--------------S----------------------
----------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SS--------------------------------------------------------
--S-----------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------S----------S----S---------------------S---------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S----------------SSS-------------------------S--S-----------
------------S---------S-------------------------------------S-S-----------------
-------S-----------------S---------------------S----S---------------------------
--------------------------------------S------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
----------------------------------------S-----------------S---------------------
--------SSSSSS--------------S---------S----------------------------------S------
-------S----------------------------------------S------S-------------------S---S
----------------------------------------S-----S-------------S---SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_484
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TCTGGTTTCCCTTCTC
CCCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2346
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CCGGCATTTCGTTTGCTAAGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
