>input_sequence_63641
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----------------------------------------------------------------------ATGGCCAAAA
TGATAGCCGCTGTCATTGTCTGCGTGTTGGTTTTAGCCCTGGATATCACTGCTGGCATACTAGGACTTCAGGCACAGGCT
GCACAAAACAAGGTACTGTTGCACTCAGATTTTCTTCATGAGATGTACTATTTTGAAATAAGGGTTTGATTAAACTGATG
TTTTCGGCTGTTTCAGCTATATCTTCGTGGACGGTTGTTACTGTAGAGTAGTTAAAGGTGCTTCAAACGATAGCTCTATC
TGACGTCTGCTCTCATTTGATCTTCTTGGCAGACTAAAAAGGTGACAGTGCTCTTCATCCAATGTGAGAAACCGGTGTAT
AAAGCATACCAGCTAGGGCTCGCGGCAGCAGTGTTCCTGGTAGTTGCTCATGCAGTGGCCAACTTTCTCGGCGGCTGTGC
CTGCATCTGCTCTCAGCTGGAGTTTATCCGGGCATCCATCAACAGGAAACTTGCAGCAACTCTTATAATTCTCTCATGGT
AACTTCGCTCTCACCTTAAAACATTATTTTGCAAATCTATAAACGACTT---GAAAAAGTGTGGGAAAGTGTCGCTTCAT
TTGTGGAAGTAGAATCATGATAAGATATGAGATGCACCTTTTT--TCTTCTCGAGAACACACAAAAGGGTCGCATGCCAT
TTCATTAAGCCAGAGAAGACAATTCTAACAGGATAGTTATACACTTAGTCAGACAAAAAAA--CACCTGAGACTATGGTC
TTGGAATTGCTACAGCTCTGTCGGTAATAATATTCTGGTCTTAAAAGTTTACGGGTAATAACCATTGTTGGATGTTCTCG
TAGGATCGCTCTCATCGTCGGCTTCTCGTTGCTGCTTGCTGGGGCCATGTCCAATTCCAAGTCGAAGACATCATGCGGGT
TCGTGCACGGCAAGACCCTGGGCCTGGGAGGGATCATGTGCTTCGTCCATGCGGGGATCACAGTCGCCTACTATGTCACC
GCCACCGCAGCGGCACACGAAATTCATTAG--------------------------------------------------
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>chr7D_1_TraesCS7D01G304300
CAAAGCAATTTATGATTAATCAGTATATTCACTTTCTGAAGTATTGAATGTGAAATCTGAACCAGAGTTGTTGCAATTGA
CCTGCAAGTTATTTCCTAGATGTTCTTTCTG-TAGCCCCCCAAGTGTGAATGTGTGATACTCAAAACATGGCATATGACT
GCTGGCATTGTTCTTTCATTGACTCATTGTTCGTTAATCAAAGCATATTTTCCGGTTTCATGAGGTTTCCTTATATCTTT
GCCTTGTCATGTCTGCTCTTGACTAAATA---TAGCAAAAATACTGCTAAATAAAATTTGCCGATGGCCAACGGTTCGGA
GGTTCTGAAGCCAACTCTGGACTGGGAAAACTTGGAAAAGTAAATTAGTAATATTTGAAGGTTCTGAAGCTAAACAAAAT
TAGTCAGCATACAAGGCTTGGTAAGCTTATAAGTTCTAAATCCATTTCAGATTTTGGAAAGGTAAATTACAAGTTTGAGT
CTCATTAATATGCATGTTTGCTGTGTCTTTCCTTGTTATTTCACTGGAGTCAAAACTTGTTTGCATGTCTTGGTAAATAC
CGTCTTATCACTCTTAACCTTTATGGGGTGCTAAGAAGAAAAGTATTTTCTTTGAGTACATCAGATCGATACTTTTCCCT
TCGTTTTCCGTTTTCCACTGGCTTTACAAACCTTGTGTGAAAGAAGAATCTGCAAAAGCGGCCTGAATATGTGATGG---
----------------------GGTGGCTTTCGTACTGGAGATGCCAATATTTACTTGTGTCCTGCAAGGAAGGAATAAA
GCTCAGATGCAACAAAGGATCGAAGGAAAGTATAACACTTTGAGCATCTTTTGACAGCTTGTTTCTAACAGCGTCATAGA
TGGAGAAAATTCTCCTGTTGCACTTTTGCCCTGGTCTCTTTATTCAGCTCTTAGCAATATAAAGGGCCACAACTCCCTTC
ATTGTAAACAGGCAATCTTTCCTCCC-CCACTTCTGAGCTGATAGAAGTTTGAGAATACAGCTATACAAGATGGCCAAAA
TGATAGCCGCTGTCATTGTCTGCGTGTTGGTTTTAGCCCTGGATATCACTGCTGGCATACTAGGACTTCAGGCACAGGCT
GCACAAAACAAGGTACTGTTGCACTCAGATTTTCTTCATGAGATGTACTATTTTGAAATAAGGGTTTGATTAAACTGATG
TTTTCGGCTGTTTCAGCTATATCTTCGTGGACGGTTGTTACTGTAGAGTAGTTAAAGGTGCTTCAAACGATAGCTCTATC
TGACGTCTGCTCTCATTTGATCTTCTTGGCAGACTAAAAAGGTGACAGTGCTCTTCATCCAATGTGAGAAACCGGTGTAT
AAAGCATACCAGCTAGGGCTCGCGGCAGCAGTGTTCCTGGTAGTTGCTCATGCAGTGGCCAACTTTCTCGGCGGCTGTGC
CTGCATCTGCTCTCAGCTGGAGTTTATCCGGGCATCCATCAACAGGAAACTTGCAGCAACTCTTATAATTCTCTCATGGT
AACTTCGCTCTCACCTTAAAACATTATTTTGCAAATCTATAAACGACTT---GAAAAAGTGTGGGAAAGTGTCGCTTCAT
TTGTGGAAGTAGAATCATGATAAGATATGAGATGCACCTTTTT--TCTTCTCGAGAACACACAAAAGGGTCGCATGCCAT
TTCATTAAGCCAGAGAAGACAATTCTAACAGGATAGTTATACACTTAGTCAGACAAAAAAA--CACCTGAGACTATGGTC
TTGGAATTGCTACAGCTCTGTCGGTAATAATATTCTGGTCTTAAAAGTTTACGGGTAATAACCATTGTTGGATGTTCTCG
TAGGATCGCTCTCATCGTCGGCTTCTCGTTGCTGCTTGCTGGGGCCATGTCCAATTCCAAGTCGAAGACATCATGCGGGT
TCGTGCACGGCAAGACCCTGGGCCTGGGAGGGATCATGTGCTTCGTCCATGCGGGGATCACAGTCGCCTACTATGTCACC
GCCACCGCAGCGGCACACGAAATTCATTAGGCCAGTAGGCATCATGCGTGCCATGCTTTTGGCCAGGAGAC-TATACGGT
CTGATACTTTCTCCCAGGAGATAACCATTCTTTCCTTGATTGCTTTTGTTGTTCCGTATCTTTCAGTTTGTTGTTCGGTC
TTTTACCTTTATATATACAACTCATGGAAGCATCAGGCTCCGACTTGTATCAAAGTTGCGCAAAAAGGAATATGATTGTG
GTTTGATTGATTCATCACTGTTTTGTTGTGAATGCTTGCCAAACAAACAATGCTGATGATCTTTCAGCAAATTCATATGT
AATTTCTAAATTCTGTCAAGTGGTATCAAATAGCTCAAAGTAGTCTGAACTCCGAACGAATTTTGTCTGATAGTTATGAT
ATGTTAAAAGCACCGAATCAAAATTATAAACATCGTATTTCCATTTTCGCTATGCAGAAACTGGCCAGTGAGGCTCACTG
ATCTGTGATTCAACCTTCTTCACCAAACAGAAGATCTTTACTTTTCCTAGGCAAGGCAGTTGTATGAAAGGACTAAACCA
GCACATCATCTAGTGCAACATATAGACCAGATGATTGTAACAATCAGCTTCTATTTATCAAGTAGTTACAGTGCAGGTCT
ATACAACACAGTTACTATTGACAGCCCTCGACACCAGTCAGCACTCACCACCATACACAAAACTGCTCAAAACTTCACCT
TCCTATCCACTAGTTCCATGCTTGATCAGGTACTTTTCGTATCAACAAAACAAAAGAATTGCACAAATCGAAAGAAGACA
GGCCAGGAACAACAGTAGGGGGAAATTTTGGTTAGTTTCCATCAGACGTCTGGAAGTTCAGAGACACTGCCAACTGATTC
CTGTCTCTGATGACCAGAGGCAGATGACTGATCCTCTGATGCCTCAAGGTCAACAGATTCGTCATCTGTCCTGCCCGGTG
GAAGCCTCCTGCCATGATGATTCCTGCTGCTGTGGCTGTGTTTCGCCACCCGGATCAGTGCCTGGACAACA
>chr7A_1
CAAAGCAATTTATGATTAATCATTATATTCACTTTCTGAAGTATCGAATGTGAAATCTACACCAGAGTTGTTGCACTTGA
CCTGCAAGTTATTTCCTAGATGTTCTTTCTGGTTGCCCCCCAA--------GTGTGATACTCAAAACATGGCATATGACT
GCTGGCATTGTTCTTTCATTGACTCATTGTTCGTTAATCAAAGCATATTTTCCGGTTTTATGAGGTTTCCTTAAATCTTT
GCCTTGTCATGTCTGCTCGTGACTAAATATA---GCAAAAATACTGCTAAACAAAATTTGCCGATGGCCGATGGTTCGGA
GGTTCTGAAGCCAACTCTGGACTGGGAAAACTTGGAAAAGTAAATTAGTAATGTTTGAAGGTTCTGAAGCTAAACAAAAT
TAGTCAGCATACAAGGCTTGGTAAGCTTATAAGTTCTAAATCCATTTCAGATTTTGGAAAGGTAAATTACAAGTTTGATT
CTCATTGATATGCATGTCTGCTGTGTCTTTCCTTGTTATTTCACTGGCGTCAAAACTTGTTTGCATGTCTTGGTAAATAC
CGTCTTATCACTCTTAACCTTTATGGCGTGCTAAGAAGAAAAGTATTTTCTTTGAGTACATCAGATCGATACTTTTCCCT
GCGTTTTCGGTTTTCCACTGGCTTTACAAACCTTGTGTGAAAGAAGAATCT-------------------------G---
----------------------GGTGGCTTTCGTACTGGAGATGCCAATATTTACTTGTGTCCTGCAAGGAAGGAATAAA
GCTCAGGTGCAACAAAGGATCGAAGGAAAGTATAACACTTTGAGCATCTTTTGACAGCTTGTTTCTAACAGCGTCATAGA
TGGAGAAAATTCTCCTGTTGCACTTTTGCCCTGGTCTCTTTATTCAGCTCTTAGCAATATAAAGGGCCACAACTCCCTTC
ATTGTAAGCAGGCAATCTTTCCTCCCACCACTTCTGAGCTGATAGAAGTTTGAGAATACAGCTATACAAGATGGCCAAGA
TGATAGCTGCTGTCATTGTCTGCGTGTTAGTTTTAGCCCTGGATATCACTGCTGGCATACTAGGACTTCAGGCCCAGGCT
GCACAAAACAAGGTACTGTTGCACTCAGATTTTCTTCATGAGATGTACTATTTTGAAATAAGGGTTTGATTAAACTGATG
TTTTCGGCTGTTTCAGCTATTTCTTCATGGACAGTTGTTACTATAGAGTAGTTAAATGTGCTTCAAACGATAGTTCTTTC
TGATGCCTGCTCTCATTTGATCTTCTTGGCAGACTAAAAAGGTGACAGTGCTCTTCATCCAATGCGAGAAACCTGTGTAT
AAAGCATACCAGCTAGGGCTCGCGGCAGCAGTGTTCCTGGTAGTTGCTCATGCAGTGGCCAACTTTCTCGGTGGCTGTGC
CTGTATCTGCTCTCAGCTGGAGTTCATCCGGGCATCCATCAACAGGAAACTCGCAGCAACTCTTATAATTCTCTCATGGT
AACTTCGCTCTCACCTTAAAACATTATTTTGCAAATCTATAAGCGACTT---GAAAAAATGTGGGAAAGTGTCACTTCAT
TTGTGGAAGTAGAATCATGATAAGATATGAGATGCACCTTTTT--TCTTCTCGAGAACACACAAAAGGGTTGCACGCCAT
TTCATTAAGCCAGAGAAGACAATTCTAACAGGATAGTTATACACTTAGTCAGACAAAAAAAAACACCTGAGACTATGGTC
TTGGAATTGCTACAGCTCTGTCGGTAATAATATTCTGGTCTTAAAAGTTTACGGGTAATAACCATTGTTGGATGTTCTGA
TAGGATTGCTCTCATCGTCGGCTTCTCGTTACTGCTTGCTGGGGCCATGTCCAATTCCAAGTCGAAGACATCATGCGGGT
TCGTGCACGGCAAGACCCTGGGCCTGGGAGGGATCATGTGCTTCGTCCATGCGGGGATCACAGTCGCCTACTATGTCACC
GCCACCGCAGCGGCACACGAAATTCATTAGGCCAGTAGGCATCGTGCGTGCCATGCTTTTGGCCAGGAGAC---TACGGT
CTGATACTTTCTCCCAGGAGATAACCATTCTTTCCTTGATTGCTTTTGTTGTTCCGTATCTTTCAGTTTGTGGTTCGGCC
CTTTACCTTTATATATACAACTCATGGAAGCATCAGGCTCCGGCTTGTATCAAAGTTGCGCAAAAAGGAATATGATTGTG
GTTTGATTGATGCATCACTGTTTTGTTGTGAATGCTTGCCAAACAAACAATGCTGATGATCTTTCAGCAAATTCATATGT
AATTTCTAAATTCTGTCGAGTGGTATCAAATAGCTCAAAGTAGTCCGAATTCCGAACGAATTTTGTCTGATAGTTATGAT
ATGTT-AAAGCACCGAATCAAAATTATAAACATTGCATTTCCATTTTCGCTATGCAGAAACTGGCCCGTGAGGCTCACTG
ATCTGTGATTCAACCTTCTTTGCCAAACAGAAGATCTTTGCTTTTCCTAGGCAAGGCAGTTGTATGAAAGGAGTAAACCA
GCACATCATCTAGTGCAACATATAGACCAGATGATGGTAACAATCAGCTTCTATTTATCAAGTAGTTACAGTGCAGGTCT
ATACAACACAGTTACTATTGACAGCCCTCGACACCAGTCAGCACTCACCACCATACACAAAACTGCTCAAAACTTCACCT
TCCTATCCACTAGTTCCATGCTTGATCAGGTACATTTCGTATCAACAAAACAAAAGAATTGCACAAATCGAAAGAAGACA
AGCCAGGAACAACAGTAGGGGGGAATTTTGGTTAGTTTCCATCAGACGTCTGGAAGTTCAGAGACACTGCCAACTGATTC
CTGTCTCTGATGACCAGAGGCAGATGACTGATCTTCTGATGCCTCAAGGTCAACAGATTCGTCATCTGTCCTGCCCGGTG
GAAGTCTCCTGCCATGATGATTCCTGCTGCTGTGGCTGTGTTTCACCACCCGGATCAGTGCCTGGACAACA
>chr7B_1
CAAAGCAATTTATTATTAATCAGTATATTCACTTTCTGAAGTATCGAATGTGAAATCTACACCAGAGTTGTTGCAATTGA
CCTGCAAGTTATTTCCTAGATGTTCTTTCTG-TTGCCCCCCAA--------GTGTGATACTCAAAACATGGCATATGACT
GCGGGCATTGTTCTTTCATTGACTAATTGTTCGTTAATCAAAGCATATTTTCCGGTTTCATGAGGTTTCCTTATATCCTT
GCCTTGTCATGTCTGCTCTTGACTAAATATACTAGCAAAAATACTGCTAAATAAAATTTGCCGATGGCCGATGGTCGG--
----------------------------------------------------------AGATTCTGAAGCTAAACAAAAT
TAGTCAGCATACAAGGCTTGGTAAGCTTATAAGTTTGTTATCCATTTCAGATTTTGGAAAGGTAAAT-ACAAGTTTGATT
CTCATTGATATGCATGCTTGCTGCGTCTTTCCTTGTTATTTCACTGGCGTCAAAACTTGTTTGCGTGTCTTGGTAAATAC
CGTCTTATCACTCTTAACCTTTATGGCGTGCTAAGAAGAAAAGTATTTTCTTTGAGTACATCAGATCGATACTTTTCCCT
GCGTTTTCGGTTTTCCACTGGCTTTACAAACCTTGTGTGAAAGAAGAATCT-------------------------GCAA
AAGTAGCCTGAATATGTGATAGGGTGGCTTTCGTACTGGAGATGCCAATATTTACTTGTGTCCTGCAAGGAAGGAATAAA
GCTCAGGTGCAACAAAGGATCGAAGGAAAGTATAACACTTTGAGCATCTTTTGACAGCTTGTTTCTAACAGCGTCATAGA
TGGAGAAAATTCTCCTGTTGCACTTTTGCCCTGGTCTCTTTATTCAGCTCTTAGCAATATAAAGGGCCACAACTCCCTTC
ATTGTAAGCAGGCAATCTTTCCTCCCACCACTTCTGAGCTGATAGAAGTTTGAGAATACAGCTATACAAGATGGCCAAAA
TGATAGCCGCTGTCATTGTCTGCGTGTTGGTTTTAGCCCTGGATATCACTGCTGGCATACTAGGACTTCAGGCACAGGCT
GCACAAAATAAGGTACTGTTGCACTCAGATTTTCTTCACGAGATGTACTATTTTGAAATAAGGGTTCGATTAAACTGATG
TTTTCGGCTGTTTCAGCTATATCTTCATGCACGGTTGTTACTGTAGAGTAGTTAAAGGTGCTTCAAACGATAGTTCTATC
TGACGTCTGCTCTCATTTGATCTTCTTGGCAGACTAAAAAGGTGACAGTGCTCTTCATCCAATGTGAGAAACCGGTGTAT
AAAGCATACCAGCTAGGGCTCGCGGCAGCAGTGTTCCTGGTAGTTGCTCATGCAGTGGCCAACTTTCTCGGCGGCTGTGC
CTGCATCTGCTCTCAGCTGGAGTTTATCCGGGCATCCATCAACAGGAAACTCGCAGCAACTCTTATAATTCTCTCATGGT
AACTTCACTCTCACCTTAAAACATTATTTTGCAAATCCATAAGTGACTTAAAGAAAAATTGTGGGAAAGCGGCACTTCAT
TTGTGGAAGT----------TAAGATATGAGATGCACCTTTTTCTTCTTCTTGAGAACACACAAAAGGGTTGCATGACAT
TTCATTAAGCCAGAGAAGACAATTCTAACATGATAGTTATACACTCAGTCAGACAAATAAC--CACCTGAGACCATGGTC
TTGGAATTGCTACAGCTCTGTCGGTAAAAATATTCTGGTCTTAATAGTTTACAGTTAATAACTATTGTTGAATGCTCTAA
TAGGATCGCTCTCATCGTTGGGTTCTCGTTGCTGCTTGCTGGGGCCATGTCCAATTCCAAGTCGAAGACATCGTGCGGGT
TCGTGCACGGCAAGACCCTGGGCCTCGGAGGGATCATGTGCTTTGTCCATGCGGGGATCACAATCGCCTACTACGTCACC
GCCACAGCAGCGGCACACGAAATTCGTTAGGCCAGTAGGCATTGTGC--GCCATGCTTTTGGCCAGTGAAATTATACAGT
CTGATACTTTCTCCCAGGAGATGACCATTCTTTTCTTGCTTGCTTTTCTTGTTCCGTATCTTTCAGTTTGTGGTTCGTCC
TTTCACCTT--TATATACAACTCATGGAAGCATCAGGCTCCGACTTGTATCAAAGTTGCACAAAAAGGAATATGATTATC
GTTTGATTGATTCATCACTGTTTTGTTGTGAATGCTTGCCAAACAAACAATGCTGATGATCTTTCAGCAAATTCATATGT
TAATTCTAAATTCTGTCAAGTGGTGTCAAATAGCATAAAGTAGTCCGAACT-----------------------------
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>SNPs
--------------------------------------------S-------------SS--------------------
---------------------------------S---------SSSSSSSS-----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-S--------
----------------------------------------------------S---------------------------
------------------------------------------------------------------------------S-
------S----------------------------------------S--------------------------------
--------------------------S-----------------------------------------------------
S-------S------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSS----
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------S----------------------------------------------S------
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---------------------------------------------------S----------------------------
------------------------------------------S---------------S--------------S------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------SS
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-------------------------------------------S------------------------------------
-----------------------------------------------------------------------S------S-
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---------------------------------------------S----------------------------------
-----S---------------------------S-S------------------------------S-------------
--------------------SS-----------------S--------------------------------S-------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
S---------------------S---------------------------------------------------------
---------------------------------S----------------------------------------------
----S---------------------------------------S--------------------------
>forward_703
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-------------------------------------------AAGAATCTGCAAAAGCGGCC-----------------
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>reverse_1579
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----------------------------------------------------------GTGTGGGAAAGTGTCGCTTC--
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>forward_705
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---------------------------------------------GAATCTGCAAAAGCGGCCTG---------------
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>reverse_1839
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------------------------------------------------------------------------------CG
TAGGATCGCTCTCATCGT--------------------------------------------------------------
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>forward_709
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-------------------------------------------------CTGCAAAAGCGGCCTGAATA-----------
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>reverse_2044
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-------------------------------------------ATGCGTGCCATGCTTTTGG------------------
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