>input_sequence_63637
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---------------------------------------------ATGGTAGAGTACTAGCCATATGTATCTAT------
----AGGACTTTTCTTCCCTATGTTGTTACCTTTTTTACTTGTTCTTCCTTGGTGCACTATCACATATATAGTTTTACTG
ACAATTCTCTTGTTGTAGGCAGAGGCATCGAATAAGAGCAAG---------AAGAAAGCAGTGGTGGAGGAGAAGAAAGA
ACCGACGAACAAGGTTAACAAACTGAATGATATTGCAGGCACCCAGGATCTCATCAAGG-----AAAGGACCAAGAAGAA
AACCACAAAGA-----------------------CAAAGGCATCACATACCCAAAGTTCGAAGGCCGCACAAGACTCTGT
GACAGAGGACAATGGAGATCT------GACTATCCAAGAGCTGGAGGACAAGATGAACGCACTCGATGTGAACATTAAAC
ACTCCAATGATAGCATCGGGAGAATGACCAAGGAGAAACTTAAGTTTGGAGGGGATATCACAACGAAGCAGAATAAGATA
ACAGAGATGGGAACAGAGATTGAGAAGCTGGACTCGGAGAAAGGAGGGCTAGTGGAGAAGAGAGGAAATCTGGACTCGCG
GAAAGAAGAAGTGGTGAAGGCGGAAAGAGAGCTGGCAGAGGATATTAAAAAGTTGGACTCGAAGAAGATAAAACTGGCGG
GGGAGAAAAGAAATCTGAGAGAGGATATGAAAGAGCTGAAGAAGAAGGATGAAAAAAAGGGAACAGATATTGCAGATCTG
GAAAAGGCAAAAAATGCGCTGGTGGAGAAGAAAGGAAAGTTGGCGACGGAGCTCGATGAGAAAAAAAAGATGAGGATTGA
TTATCTGGAGAAGAGGAACGAGGTGCTGGTGGAGGGCAAAAGGAAGCTGGCCAAGCACAACGAGGAACTGAAGAAGGACA
ACAAGGAATTGAAGAAGGAGAACGAGGAACTGGAAAAGACGAGAGTGAAGAAAGAGAAACTGGAAAGCCTGTACGAAGAG
CTGCAGGAGAAGTACGATGGGAGATGCTGCAGTTGCTGCACAATTTGTTAA-----------------------------
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>chr7B_1_TraesCS7B01G449400
AAATTTATATTCACGCGCGCCCTAA--ACCTTTCACTGAAGTAGCTACCATTCGTCACTTTGAAAACCTACACCAGGAAT
GCCAGTGGGCGGATGGACGGGCTGCCCATTTGAATGCAGTAAATAGCAGGCCCTTCCCGTCTTCTCATTGCTCCGACATT
CAACAGGCGGGAGAGCGGGACGCAAAGCGGGCGGC--TCTCGGCCTTCGCTCATGTTCAATGTCGGAGCGATGTGAGAGG
TCGTGTCCACTTTAGGTCAGCATGGATACGGCGGTAAAGCTCCTGG----------------------ACTTCAGGTGGG
AAAGGGCGCGGAGTGAGGGAGGGGGTTTTGGGTGGGTCTAGATTATCAGACGCGTCCAAGGCAGCGGTCCGGATGACCGC
AAAGCCCCT-GCTTCCGATTTGCGGACCGGTCCGTGGACAGGTAAGGGAAAGTGTTGGTTCAAACGAGCTGGTCCGGACA
GACAAGAGTGGTTTGACGGTCAGCGTTGAAGATGCCCTAATGACCATATGCTCGTAGCCGAGACACGTGCTTGCTTCCTC
GCGTGCGGAAGGCGACAGAGGC-ATTCAGGTCTCCTCCGCATGCATGCACTTATGCAGCCTCTGCTTTCGTTCTCTCTCC
GACTCCCCATCACCACTTGCTA---CTACTTTTCTAGCAAGCTCGTGAAAAAAGTGTTTTCCGCTC-------TGTAGTA
CTAAATTCCTGACATT---GAACCTTTAATTACATCGTAGTATGTACTA-ATTCATACAT--TACATATCCACCAATTTG
CGCGTGTTGACGAACTTGCCTAGTC--------G-TCATCTAGTATGACCAGCAAAAGGAAGTGGAGC------------
------------ATGGCGGCGAGCCTTTTGATTTAAGAAAATAGTAGTGGGCGTAGCTAGGAAACCGCAGCGAATAGTAC
AA----AGAAGGAACATTGAGCTACAGATTGCAGCTATATAAGTGATGGCCCGCCAGGCTTCATTGATCAAAGCAGGAAG
CAAAGGTTCAAGG----ACACAGACACACATCACAAATATACACAATGGTAGAGTACTAGCCATATGTATCTAT------
----AGGACTTTTCTTCCCTATGTTGTTACCTTTTTTACTTGTTCTTCCTTGGTGCACTATCACATATATAGTTTTACTG
ACAATTCTCTTGTTGTAGGCAGAGGCATCGAATAAGAGCAAG---------AAGAAAGCAGTGGTGGAGGAGAAGAAAGA
ACCGACGAACAAGGTTAACAAACTGAATGATATTGCAGGCACCCAGGATCTCATCAAGG-----AAAGGACCAAGAAGAA
AACCACAAAGA-----------------------CAAAGGCATCACATACCCAAAGTTCGAAGGCCGCACAAGACTCTGT
GACAGAGGACAATGGAGATCT------GACTATCCAAGAGCTGGAGGACAAGATGAACGCACTCGATGTGAACATTAAAC
ACTCCAATGATAGCATCGGGAGAATGACCAAGGAGAAACTTAAGTTTGGAGGGGATATCACAACGAAGCAGAATAAGATA
ACAGAGATGGGAACAGAGATTGAGAAGCTGGACTCGGAGAAAGGAGGGCTAGTGGAGAAGAGAGGAAATCTGGACTCGCG
GAAAGAAGAAGTGGTGAAGGCGGAAAGAGAGCTGGCAGAGGATATTAAAAAGTTGGACTCGAAGAAGATAAAACTGGCGG
GGGAGAAAAGAAATCTGAGAGAGGATATGAAAGAGCTGAAGAAGAAGGATGAAAAAAAGGGAACAGATATTGCAGATCTG
GAAAAGGCAAAAAATGCGCTGGTGGAGAAGAAAGGAAAGTTGGCGACGGAGCTCGATGAGAAAAAAAAGATGAGGATTGA
TTATCTGGAGAAGAGGAACGAGGTGCTGGTGGAGGGCAAAAGGAAGCTGGCCAAGCACAACGAGGAACTGAAGAAGGACA
ACAAGGAATTGAAGAAGGAGAACGAGGAACTGGAAAAGACGAGAGTGAAGAAAGAGAAACTGGAAAGCCTGTACGAAGAG
CTGCAGGAGAAGTACGATGGGAGATGCTGCAGTTGCTGCACAATTTGTTAACACTCTGAGTACGGGCTATTAGCATATTA
CTACGTGATTTCGACATATGTAGTGATATTGCTGTGTACGCAACATGGGTAATTGTCTCTTTTACTTTAATTTTCGTCTA
TGCATGTCTATGTGTTTCTTTCCGAGTGTTGTAAGCTCTTTCAAAAATATATGTCCTTTTACAAATTTCAGTTGAGACTG
CATACGAAGCAACATGAGTGAATGTACACTCTAAAATATGTCGATGTACATCCGTATGAAGTTATTATTGAAATCTCTAA
AAAAAACTCATATTTAGGAACCGAGGAAATAGAACTTAATTTATAGATCCTTTTTAATGTTACTTTCTGTGTAGTAATAC
CATGTGCTTTCATTAGTAAGACAAATGGGCTCAAATGAGCTGATGGATTCCTACATACATAACTGAACTCCAAATCGGCT
GTACTGCATTTATCATCTGAAGCATTTAGTTGCATCGTGCTTGCGGCTTGCCGGATTCGGCTCTTTTGCTGAGCAGCGCC
CATCCAACACGCCCAATAATGCTACACGTACAGGAGATTACGGGCGTTTTACAGGCTGACTAGGAGTCCGTCCGACGTGG
CTGCGAGGGTGCGAGCGCGCGCTGAACTGAAAAGGAAAAGATAAAATAAAAAAAAAAATCCCGGCGGTTTCCTTTCTCTC
CCAAGCGACGACCGGCTCGCCCAGATCGGCCAAGCTATCTGCTCCAGTTCCCCTCATGGCTGTGTGGATGCGATCTCTTT
CGACGCGTCAGGATGTGCTACCTTCAGGCGGCGAGGCGACTTCCTCCTCGTTGGATGCCCCATGGCTGCCTCCTCCGATG
CGTCGAGGCGATCCCCTGCTTGTCGGCAGTGTCAGGACCGGTTCCTCCAGGGCGACCAGGCGATCCCCTGCTCGTCGGCA
GCGTGACGGCCGGCTCCTTCAGAGAGGCGAGGCGGCCTCGTCGTATAGACGCTGGAAGCGCCGTGGGCGAGCCCCGTGGA
GCCCTGGGCGG
>chr7D_1
AAATTTCTATTTACGCACGCCATTTCTACCTATCACTGAAATAGCTATCGTTCGTCACTTTGAGAACGTACGACA-GAAT
GCCAGCAGGCGGACGGACCGGCTGCCCGTTTGAATGCAGTAGATATCAGTCCCTTCTCGTCCTCTCCTTGCTCCG-CATT
GAACAGGCAGGAGACCGGAACGTGAAGCCGCCGGCATTCTCGGCCGTTGCTCATGTTCAATGCCGGAGCGACGTGAAAGA
TCGCGTCCACTCTAGG-CCGCGTGAATGCGGCATTAATGCTTTTGGGCGGCATGAATAAGCGGCAACTACTTCAGACGGG
AAAGGGCACGGGGTGAGAGAGAGGCTTTAGAGTGGGATTGG-----CAGACGCGTGCAAGGCAGCGGTCCCGATGACTGC
AAAGCCCACCGCTTCTAATTTGCGGACCGGTCCGGGGACGAATACGGAGAAGTGTTGGTTCAAACGGGCTAGTCCGGGTG
GACAGGAGTGGTTTGAGGGTCAGTGTTGAAGATGCCCTAATGGCCATATGTGCGTAGCCGAGGCAAGTGTTTGCTTCCTC
GCGTGCCGAAGGCGACAGAGGGTATTCAGGTCTCCTCCACATGCACGCACGCATGCAGCCTCCGCTTTCGTTCTCACTCC
GACACCCCATCACCACTTGGTAGTACTATTTTTCTAGCAACGCTGGTGAAAAAGTGTTTTCGGTGC-------TGTAGTA
CTAAATTCCTGACATC---GAACCTTTAATCATGTCGTAGTACGTACTAAATTCATACAT--TACAAATCCATCAATTTA
CGCGTGTTGACGAACTTGCCTAGTC--------G-TCATCTAATATGACCTGCAAAAGGAAATGGAGC------------
------------ATGGCAACGAGCCTTTTGATCTAAGAAAATAGGAGTGGGCGTAGCTGGGAAACCGCAGGGAATATTAC
AA----AGACGGGACATTGAGCTACAGATCGCGGCTATATAAGGGATGGCCGGCCAGGATTCATTGATCAAACCAGGAAG
CAAAGGTTCAAGG----ACACAGACACACATCACAAATACACACAATGGTAGAGTAGTAGAC------ATATAT------
----AGGACTTTTGTTTCCTATGTTGTTACCTTTTGTACTTGTTCTTCCTTGGTGCACTATCACATAGTTG----TACTG
ACAACTCTCTTGTTGCAGGCAGAGGCATCGAATGGGCGAACTTCAAAGGTCAAGAAAGCAGTGGTGGAGGAGAAGCTAGA
ACCCAAGAACAAGGTAAACAAACTGAATGATATTGCAGGCAGCCAGGTTCTCATCGGGGAAATTAAAGGACCAAGAAGAA
AACCA---------------------------------------------------------------------------
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>chr7A_375
AAAGCC--------------------------------------------------------------------------
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-----CCCT-GCTTCCGATTTGCGGACCGGTCCGGGGACGAATACGGGAAAGTGTTGATTCAAACTGACTGGCCCGGACG
GACACTAGTGGTTTGACGGTGAG-------GATGCTCTAATGGCTATATGCGCGTAGCCGAGACACGTGTTTGCTTCCT-
GCGTGCGGAAGGCGACAGAGAC-ATTCATGTCTCTTCCACATGCATGCACGCATGCAGCCTCCACTTTCGTTCTCTCTCG
GACTCCCCATCACCACTTGGTA---CTACTTTTCTAGGAACGCGCGTGAAAAAGTGTTTTCGGTTCTGTAGTGTGTAGTA
CTAAATTCCTGACATTATTGAACCTTTAATCATGTCATAGTACGTACTAAATTCATACATTATACATATCCACCATTTTG
CATGTATTGACGAACTTGCCTAGTTATTGCTTTG-TCATCTAATATGACCTGCAAAAGGAAGTGGAGCTGCT---TTCTT
ATGAAATGGAACATGACGACGAGCCTTTTGATCTAGAAAAATAGTAGTGGGCGTAGCTAGGAAACCGCAGCGAATATTAC
AA----AGACGGGACATTGACCTACAGATTGCGGCTATATAAGTGATGGCC-GCCAGGCTTCATTGATCAAAGCAGGAAG
CAAAGGTTCAAGGACACACACACACACACATCACAAATACACACAATGGTAGAGT-------------------------
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>chr1A_635
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-------------------------CTATTTTTCTAGCAACGCCCGTGAAGAAGTAGTGCTTTCGGT----TGCGTTGTA
CTAAATTCCTGACATC---GAACCTTTAATCATGTTGTAGTACGTACTAAATGCATACGTTATACATATCCACTAATTTG
CGCGTGTTGACGAACTTGCCTAGTTATTGCTTTGGTCATCTAA-ATGACTTGCAAAAGGAAGTGGAGCTGCTTTCTTCTT
ATGAAATGGAACATGACGATGAGCCTTTTGATCTAAGAAAATAGTAGTGGGCGTAGCTAGGAAACCGCAGCGAATATTAC
ACACATAGACGGGGCGTTGACCTACAGATTGCGGCTATATAAGTG-TGGCCGGCCAGGCTTCATTGATCAAAGCAGGAAT
CAAAGGTTCAAGG----GCACGGACACACACCACAAATACACACAATGGTAGAGTAGTGGACCTTTTGTTATATATATAG
AGAGAGAACTTTTGTTCATTATCTTGTTACCTTTCGTACTTGTTCTTCCTTGGTGCACTATCACATAGTTG----TACTG
ACAATTCTCTTGTTGCAGGCAGAGGCACCGAATAAGAGCAAG---------AAGAAAGCAGTGGTGGAGGAGAAGAAAGA
ACCGAAGAACAAGGTTAACAAACTGAATGATATTACAGGCACCG-----------------------------AGAAGAA
AACTACAAAGGACTTACTATACTCTTGTTGCAGGCAAAGGGATCGAATGCCCAAAGCTCGAAGGGCAAGGAAGTGGAG--
----GAGGACAACAGAGATCTAAAGAGGACTATCCAAGACCTGGAGGACAAGATTAGCGCACAGAATGTTAAAATTAAAG
ACAACCAGACTCGCATAGGGAAAGTGGCCATGGAGAAAGATAATGTGGAAGAGGATATCACAGAGCAGAAGAATAAGGAA
ACAGAGACGGGAAGAAAGATTGATAGGCTGGACATGAGGAAAGGAAAGCTGGTGGAGAAGATAGGGAATCTGGACTTGCA
GAAAGAAGAAGTGGTGAAGG------------------------------------------------------------
---AGAAAACAAAGCTGGGAAAGGGTAT----------------------------------------------------
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>SNPs
------S----S----S----S-SS------S--------S------S-S-------------S---S---SS--S----
-----SS------S----S--------S-------------S---S---S------S----S----S--------S----
S-------S-----S---S---SS----S-S--------------S-S--------------S--------S----S--S
---S-------S----S-S--S--S--S----SS---S---SS--------------------------------SS---
-------S---S-----S---S--S---S-S-----SS-S-SSSSS---------S--------------S------S--
----------------------------------S----SSS--S---------------------S------------S
----S------------------S------------------S--------S-----------------S----------
--------------------------------------S-----------SS----------S-----------------
-------------------S--------------------SSS--SSS-------------S------------------
------------------------------S-SS--------S-------------------------------------
------------------------------------------S-------S-----------------------------
------------------S-------------S-------------------------------------------S---
---------S--S-------------------S------------------S----------------------------
---------------------------------------S----------------S---S-S-S-SS--S---------
-------------S---------------------S-------------------------------SS-SSSSS-----
---------------S----------------------------------------------------------------
-----S-----------------------------------------S-------SS-----------------------
----------S-----------------------------S---SS--S-------S-------S-SSSS---SSSSSSS
SSSS--------SS-------------------------S--------------S-S-----SSS----S--S------S
--SS-S-SSS-S----S----S-S--S---S-------SS---SS-S-S--S----------SS-S--S--------SS-
-------S-----S-S-------S-S-------SS-SS-------SS---S----------S---S----------S--S
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS------S---S---S--S---S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS
>forward_175
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CAACAGGCGGGAGAG-----------------------------------------------------------------
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>reverse_1852
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-----------AAATGCGCTGGTGGAGAAGA-------------------------------------------------
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>forward_1704
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----GAAGAAGTGGTGAAGGCGGA--------------------------------------------------------
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>reverse_2823
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----------------------AGATCGGCCAAGCTATCTGC--------------------------------------
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