>input_sequence_63595
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--------------------------------------------ATGCCCACCGGCGCGGACGAGCGCGTCTACTGCCCG
GACTGCCGCCGCGCGACGGAGGTGGTGCTGGACCACAGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGCTCCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGCGCCTCCGGGGACCCCTTCCTCAACGCCAAGCTCTCCACCGTCATCGCCTACGACAAGAAGCCCGGCAAGTCCTCC
GGCGA---------GGCCAACGCCCTGCCGCGGACGTCCGTGCCCGGCGACGGCGCCGGCGCGGCCTCCGACAAGACCCT
CGTCGACGGCTTCCGCGGCATCGGCGACATGGCCGACCGGCTCGGCCTCGTCGCCACCATCCGGGACCACGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCGTCCCGCGCGGCCGGAACCGCGACTCGGTCTACGCCGCCTGCATCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACCTACAAGGAGCTCGCCTCCGTCACGGCCGCCGGCCCGGCCGCCAAGAAGGA
CATCGGCAAGATGTCGACGCACATCAAGAAGCTCCTCGGCGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCTCGGACTACCTGCGCCGCTTCTGCTCGCGCCTCGGGCTGGGCAACCAGGAGGTGCGGGACGCGCAGGAGGCCGTGCGC
AGGCTCGAGGAGCGCCTCGACGTGCGCCGCAACCCCGAGTCCATCGCCGCCGCCGTCATCTACATGGTCGTCCAGCGCGC
CGGCGCCACCAACT---------CCAACTCCGCCATCAAGGACGTCTCCGTCGCCACCGGCGTCGCCGAGGGGACCATCA
AGGAGGCGCACAAGGACCTCACCCCGCACGCCCACATGCTCTTCGCCCCGCCTGTCACCGCCCACGACATTATTAACCCT
TTATTACAAGCTTGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G368400
ACCAATGAGTTCGTATTCAAAAGAAGTTTTCAATTATATATTTTTTGCTCCCACCACAATTGATTTCGTTGGTTAAATTT
ATGGTCAAAGTTGAATCTTGAGAAGCATGGACACACTAGGGCCTCTTTGATTCGCGGGATTGCAAAAACACAGGAATAGG
AAAAACGTAGGATTGAAATGACATGCCCATTGGATTCCTATAGGATTTGAGTTTATTTGATTGTATCACAGGAAAAATAA
AGAATTTCTTCCAAGAGGTTGGAGTGGATGCTACAATTCCTATGAAATGTAGTTTAAATGAATCCATAGGAAAATATCCT
ATGGGATTCAATCCTGCGAATCAAACGATCAACGCAGAAAAAATTCCGAAGGATTCTTATCCTTCAAAAATCCTATGAAA
ATCCTTTGAATCAAAAAGGCCCTATATTTTGGAACGGAGGAAGTATAGTATATTAGTATGACTAACTATTATACAAGCCG
GCTATTAGGTTGGCTTATACAATAATAAAATTTAAATGTGTAGTACTTTATTAATAGCTGGTCCATCATACATTCTCACA
AAATAATTTTGGTCCTTATAGCCGGCTCTTATTCTACAGCTCACTTTTCTTCTCTCTCCTCTCCCCTCTTCTCCAACTAA
ATAAGAATATTTTAGTTTTTATAGTCTGTTTATGCCATCATATTGTATTTGCTCTAACCATGCTTTCCCTAATCGGACGA
TTGATGAGGCGGCCAAT--GCATCAACGATCACTTA-GGTTCCCAAGCGTTTGTATATCCTTATTAAAAAAATCACACGG
TGAATTTAAAGCGTGCCGCGTCCGTGCACAAAACGAGTCGAAGTCGCTTCCGGGTCCGTGGCGCGCCCGCCCACTCCCCG
CACCGACCTATCAGCCTTTAAATACCAGCCGCCCCAGCTTCCCAAACCCTTTCCCC-AGCACTTTCCCCGAGCCGCCGCC
GCCGCCGCCGCCGCAACCAAGCACCGATAGTTTCTCGCGCCACGATGCCCACCGGCGCGGACGAGCGCGTCTACTGCCCG
GACTGCCGCCGCGCGACGGAGGTGGTGCTGGACCACAGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGCTCCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGCGCCTCCGGGGACCCCTTCCTCAACGCCAAGCTCTCCACCGTCATCGCCTACGACAAGAAGCCCGGCAAGTCCTCC
GGCGA---------GGCCAACGCCCTGCCGCGGACGTCCGTGCCCGGCGACGGCGCCGGCGCGGCCTCCGACAAGACCCT
CGTCGACGGCTTCCGCGGCATCGGCGACATGGCCGACCGGCTCGGCCTCGTCGCCACCATCCGGGACCACGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCGTCCCGCGCGGCCGGAACCGCGACTCGGTCTACGCCGCCTGCATCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACCTACAAGGAGCTCGCCTCCGTCACGGCCGCCGGCCCGGCCGCCAAGAAGGA
CATCGGCAAGATGTCGACGCACATCAAGAAGCTCCTCGGCGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCTCGGACTACCTGCGCCGCTTCTGCTCGCGCCTCGGGCTGGGCAACCAGGAGGTGCGGGACGCGCAGGAGGCCGTGCGC
AGGCTCGAGGAGCGCCTCGACGTGCGCCGCAACCCCGAGTCCATCGCCGCCGCCGTCATCTACATGGTCGTCCAGCGCGC
CGGCGCCACCAACT---------CCAACTCCGCCATCAAGGACGTCTCCGTCGCCACCGGCGTCGCCGAGGGGACCATCA
AGGAGGCGCACAAGGACCTCACCCCGCACGCCCACATGCTCTTCGCCCCGCCTGTCACCGCCCACGACATTATTAACCCT
TTATTACAAGCTTGATTCTGTCTGTGGCAGCTCCAATTCCAACCGTGTGTGTGTGTGTCTTCTTCTTGGCCAACTATATA
TCTTAAGCTTGGACATGCCAAGTTTGTGTTGGCCTCATCCGTTTCTAAGTACTGAAGAACC-------------------
------------------------------------------------------------------------ATTCGTGC
TTGATCCGTTTGTTCCAGTTATTAAACT-----CATGAACTGTGGCCTGAGACCTAATCCAGTTTGCTAA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CAAAATTCAAAATCTGGTTGAATTTCA-------------------------------
--------------------------------------------------------------------------------
---------TTAGAAAATTGGCATGCTAATGTGTTGCGTTCTGTCAGGCGA---------GACAAATTCATGTAGAAAGA
AAGAATCGCCTCGTGTTAATAACCATTAACCAATCGAAGGAATCTGACATGGGTTGCTGAGGTGATGTTAGTCACACATG
TTATTTGCCAGCCTATAATGAATTGGACATTCAGGGTGGGGAGATCATTACATCTTCTTGTTGAATAGGCGCATACTTGA
GGCTGGTCATAATGTGAGTAACTCAGCAAGTAACAAAGCGCATTTCAAGACAAGTTTGCTTATGTGACATATAATTAATA
AGAAGAGAGGTGTTTGGAGTAACATAATATGTTACTGTAACATAACGCAACCCAAAGCAAAATGAGTCTATAATATAATA
AATGCCACCATCTATGATACTAATTGTATGTCACTTTGCACTATGTAAGTAGTAACAAAGACTAGTATCATATGCATGAC
ACTAATTTAAGTTACTCCCCACTATGACTAGCCTGAGAACATATAAGATCAGGATTTTATCTGGACGGGCGACATATGTC
TTTTTTAACTAATATCACTGGATATTCAGTTTGGTGCTAAAACTCATAAAATACGGATTTGCGGTCATATAACTAGTTGA
TTGGTGCAAATACGGTGCATTCTACTGTATCCAGGCATACAATCCTGCCTATCTATATGACGACTTATCAATTTTTTTCT
TACATTATTCAATGACGGGTTAGCCTCACCTGAGCTTTTTTTGCGCAATTAAAAAAATTCAGGGAGTTATCT
>chr1B_709
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------CTAATCGGACGA
TTGCTGAGGCAGCCAATGCGCATCAACGATCAATTAGGGTTCCCAAGCGTTTTTCCTTGAA----AAAAAAATCATACGG
TGAATTTAAAGCGTGCCGCGTCCGTGCACAAAACGAGTCGAAGTCGCTTCCGGGTCCGTGGCGCGCACGCCCACTGCCCG
CACCGACCTATCAGCCTTTAAATACCAGCCGCCCCAGCTTCCCAAACCCTTTCCCCCAGCACTTTCCCCGAGCCGCCGCC
GCCGCCGCCGCCGCAACCAAGCCCCGAGAGTTTCTCGCGCCACGATGCCCACCGGCGCCGACGAGCGCGTCTACTGCCCG
GACTGCCGCCGCGCGACGGAGGTGGTGCTGGACCACGGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGCTCCGAGTGGCGCAGCTTCGCCGCCGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGCGCCTCCGGGGACCCCTTCCTCAACACCAAGCTCTCCACCGTCATCGCCTACGACAAGAAGCCCGGCAAGTCCTCC
GGCGA---------GGCCAACGCCCTGCCGCGGACGTCCGTGCCCGGCGACGGCGCCGGCGCGGT---------GACCCT
CGTCGACGGCTTCCGCGGCATCGGGGACATGGCCGACCGGCTCGGCCTCGTCGCCACCATCCGGGACCACGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCGTCCCGCGCGGCCGGAACCGCGACTCGGTCTACGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACCTACAAGGAGCTCGCCTCCGTCACGGCCGCGGGGCCGGCCGCCAAGAAGGA
CATCGGCAAGATGTCGACGCACATCAAGAAGCTGCTCGGCGAGGAGGACGGCCAGGTGATGGACATCGGCGTGGTGAGCG
CCTCCGACTACCTGCGCCGCTTCTGCTCGCGGCTCGGGCTGGGCAACCAGGAGGTGCGCGACGCGCAGGAGGCCGTGCGC
AGGCTCGAGGAGCGCCTCGACGTCCGCCGCAACCCCGAGTCCATCGCCGCCGCCGTCATCTACATGGTCGTGCAGCGCGC
CGGCGCCACCAACT---------CCG---------TCAAGGACGTGTCCGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGCGCACAAGGACCTCACCCCGCACGCCCACATGCTCTTCGCC---CCTGTCACCGCCCACGACATTATTAACCCC
G---TTCAAGCTTGAT----TCTGTGGCAGCTCCAATTCCAACCGCGTGTGTGTG----TTCTTCTTGGCCAAC----TA
TCTTAAGCTTGGACATGCGAAGTTTGTGTTGGAC---TCAGTTTCTAAGTATCCCTCCGTAAACTCCCTCCGTAAACTAA
TATAAAAGCATTTAGATCACTATTTTAGTTATCTAAACGCTTTTATATTAGTTTACAGAGAACTTATGCATGATTCGTGC
TTGATTCGTTTGTTCCAGTTA---AAACTCATGCATGAACTCTAGTCTGAAACATACTCCCTCCATTTGGAATTACTTGT
CACAAAAATGGATGTATCTATAACTAAAATACATCTAGATACATTCATTTTTTGGACGAGTAATTCCGAATGAAGGGAGT
AGTTGCTAAGTACACTACACTTAGAATGATCGATCTCATGAACGTGAGGGTAATTTTGCTGACTTTTTGTCTCAAGGCGG
CGACACTTTGATACCATCTAGGCAAAATTCAAAATTTGGTTGAATTTCGTTGAAACTGGAACCAGATTCAACGAAATTCA
ACCAAATTTTGAAAACTGAAATAGTAGTTAATTTCACCGTAATTTGACGAAAAACTAAATCAGAAATCCACAATGTGAAT
GCCCTCGAGTTAGAAAATTGGCATGGTAATGTGTTGCGTTCTTGTCAGGTGAGGTCGTCTGACAAATTCATGTAGAAAGA
AAGAATCGCCTC--------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1D_778
TTATAAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AAAAATCATACGG
TGAATTTAAAGCGTGCCGCGTCCGTGCACAAAACGAGTCGAAGTCGCTTCCGGGTCCGTGGCGCGCACGCCCACTCGCCG
CACCGACCTATGAGGCTTTAAATACCAGCCGCCCCAGCTTCCCAAACCCTTTTCCCCAGCACTTTCCCCGAGCCGCCGCC
GCCGCCGCCGC---AACCAAGTCCCGAGAGTTTCTCGCGCCACGATGCCCACCGGCGCCGACGAGCGCGTCTACTGCCCG
GACTGCCGCCGCGCGACGGAGGTGGTGCTGGACCACGGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGCTTCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGCGCCTCCGGGGACCCCTTCCTCAACGCCAAGCTCTCCACCGTCATCGCCTACGACAAGAAGCCCGGCAAGTCCTCC
GGCGA---------GGCCGGCGCCCTGCCGCGGACGTCCGTGTCCGGCGACGGCGCCGGCGCGGCCTCCGACAAGACCCT
CGTCGACGGCTTCCGCGGCATCGGCGACATGGCCGACCGGCTCGGCCTCGTCGCCACCATCCGGGACCACGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCGTCCCGCGCGGCCGGAACCGCGACTCGGTCTACGCTGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACCTACAAGGAGCTCGCCTCCGTCACGGCCGCCGGCCCGGCCGCCAAGAAGGA
CATCGGCAAGATGTCGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCTCCGACTACCTGCGCCGCTTCTGCTCGCGGCTCGGGCTGGGCAACCAGGAGGTGCGCGACGCGCAGGAGGCCGTGCGC
AGGCTCGAGGAGCGCCTCGACGTGCGCCGCAACCCCGAGTCCATCGCCGCCGCCGTCATCTACATGGTCGTGCAGCGCGC
CGGCGCCACCAACCCCAACTCCGCCG---------TCAAGGACGTCTCCGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGCGCACAAGGACCTCACCCCGCACGCCCAGATGCTCTTCGCCTGACCGCCCGCCC--------------------
--------------AT----TCTTTGGCAGGTCCAGTTCGGAAC----GTGTGTG----TTCTTCTTGGGCAAC----TA
TCTTAAGCTCGGACATGTGAAGTTTGTGTTGGAC---TCCGTTTCTAAGTACTGAAGAACC-------------------
------------------------------------------------------------------------ATTCGTGC
TTGATTCGTTTGTTCCAGTTA---AACT-----CATCAACTGTGGTCTGAGACATAATCCAGTTTGCTAAC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1A_1009
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCCGACGAGCGCGTGTACTGCCCG
GAGTGCCGCCGCGCGACGGAGGTTGTCCTGGACCACGGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGACGACCGCGACCCCAGCCGCG
TCGGCACCTCCGGCGACCCCTTCCTCGCCGCCAAGCTCTCCACCGTCATCGACTACACCAACAAGACCAAGAAGTCCTCC
GCCACCGGCGTGGCGACAAAGGCCCCGCCGAGGATGTCGGTGCCGGACGCGGGG------GTGGCCTCCGAAAACACCCT
CGTCGACGGCTTCCGCGGCATCGCCGACATGGCCGACCGGCTCGGCCTCGTGGCCACCATCCGGGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCTGCCCGCGCGGCCGGAAGCGGGACTCCGTCTACGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGGAGCTCGCGTCCGTCACCGCCGGGGGCGTGGCCGCCAAGAAGGA
CGTCGGCAAGATGACGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCACTGACTACCTGCGCCGCTTCTGCTCCCGGCTCGGCCTGGGCAACCAGGAGGTGCGCGACGCACAGGAGGCCGTGCGG
AGGGTCGAGCAAGGGCTCGACGTGCGCCGCAACCCGGAGTCGGTCGCCGCCGCCATCAGCTTCATGGTCGTGCAGCGCGC
CGGCGCCGGCAGGT---------CCG---------TCAAGGAAGTGTCCGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGTGCACAAGGACCTCACCCCGCACGCCCAGATGCTCTTCGGCTGAGCCTGAG-CGCCCACGACATTA--------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1A_1009
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------GCCGACGAGCGCGTGTACTGCCCG
GAGTGCCGCCGCGCGACGGAGGTTGTCCTGGACCACGGCACAGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGACGACCGCGACCCCAGCCGCG
TCGGCACCTCTGGCGACCCCTTCCTCAACA-CAAGCTCTCCACCGTCATCGACTACACCAACAAGACCAAGAAGTCCTCC
GCCACCGGCGTGGCGACAAAGGCCCCGCCGAGGATGTCGGTGCCGGACGCGGGG------GTGGCCTCCGAAAACACCCT
CGTCGACGGCTTCCGCGGCATCGCCGACATGGCCGACCGGCTCGGCCTCGTGGCCACCATCCGGGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCTGCCCGCGCGGCCGGAAGCGGGACTCCGTCTACGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGGAGCTCGCGTCCGTCACCGCCGGGGGCGTGGCCGCCAAGAAGGA
CGTCGGCAAGATGACGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCACTGACTACCTGCGCCGCTTCTGCTCCCGGCTCGGCCTGGGCAACCAGGAGGTGCGCGACGCACAGGAGGCCGTGCGG
AGGGTCGAGCAAGGGCTCGACGTGCGCCGCAACCCGGAGTCGGTCGCCGCCGCCATCAGCTTCATGGTCGTGCAGCGCGC
CGGCGCCGGCAGGT---------CCG---------TCAAGGAAGTGTCCGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGTGCACAAGGACCTCACCCCGCACGCCCAGATGCTCTTCGGCTGAGCCTGAG-CGCCCACGACATTA--------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1B_1009
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------GCCGACGAGCGCATGTACTGCCCG
GAGTGCCGCCGCGCGACGGAGGTTGTCCTGGACCACGGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCCGAGTGGCGTAACTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGAGCCTCCGGCGACCCCTTCCTCGCCGCCAAGCTCTCCACCGCCATCGACTACACCAACAGGCCCAAGAAGTCCTCC
ACCACCGGCGTGGCGGCCAACGCCCCTCCGAGGATGTCGGTGCCGGACGCGGAG------GCGGCCTCCGACAAGACCCT
CGTCGACGGTTTCCGCGGCATCTCCGACATGGCCGACCGACTCGGCCTCGTGGCCACCATCCGCGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGGTGCCCGCGCGGCCGGAAGCGGGACTCCGTCTACGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGGAGCTCGCCTCCGTCACCGCCGGGGGCGTCGCTGCCAAGAAGGA
CGTCGGCAAGATGACGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTGAGCG
CCTCCGACTACCTGCGCCGCTTCTGCTCCCGGCTCGGCCTGGGCAACCAGGAGGTGCGCGACGCGCAGGAGGCCGTGCGG
AGGGTCGAGGAAGGCCTCGACGTGCGCCGCAACCCGGAGTCGGTTGCCGCCGCCATTATCTACATGGTCGTGCAGCGTGC
GGGCGCCGGCAGGT---------CCG---------TCAAGGATGTGTCCGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGCGCAGAAGGACCTCACCCCGCACGCCCAGATGCTCTTCGGCTGAGCCGGAG-CGCCCACGACATTA--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1D_1009
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCCGACGAGCGCATGTACTGCCCG
GAGTGCCGCCGCGCGACGGAGGTTGTCCTGGACCACGGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAACCGCG
TCGGCGCCTCCGGCGACCCCTTCCTCGCCGCCAAGCTCTCCACCGTCATCGACTACACCAACAAGCCCAAGAAGTCCTCC
GCCACCGGCGTGGCGACAAAGGCCCCGCCCAGGATGTCGGTGCCGGACGCGGGG------GCGGCCTCCGAAAACACCCT
CGTCGACGGCTTCCGCGGAATCTCTGACATGGCCGACCGGCTCGGCCTCGTGGCCACCATCCGGGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCTGCCCGCGCGGCCGGAAGCGGGACTCCGTCTACGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGGAGCTCGCCTCCGTCACCGCCGGGGGCGTGGCTGCCAAGAAGGA
CGTCGGCAAGATGACGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCTCCGACTACCTGCGCCGCTTCTGCTCCCGGCTTGGCCTGGGCAACCAGGAGGTGCGCGACGCGCAGGAGGCCGTGCGG
AGGGTCGAGGAAGGGCTCGACGTGCGCCGCAACCCGGAGTCCGTCGCCGCCGCCATCATCTACATGGTCGTGCAGCGTGC
CGGCGCCAGCAGGT---------CCG---------CCAAGGACGTGTCCGTCGCCACCGGCGTGGCCGAGGGCACCATCA
AGGAGGTGCACAAGGACCTCGCCCCACACGCACAGATGCTCTTCGGCTGAGCCTGAG-CGCCCACGACATTA--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1A_1013
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCGGACGAGCGCGTGTACTGCCCG
GAGTGCCGCCCCGCGACGGAGGTTGTCCTGGACCACGGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGACGACCGCGACCCCAGCCGCG
TCGGCACCTCTGGCGACCCCTTCCTCAACACCAAGCTCTCCACCGTCATCGACTACACCAACAAGACCAGGAAGTCCTCC
GCCACCGGCGTGGCGACAAAGGCTCCGCCGAGGATGTCGGTGCCGGACGCGGGG------GTGGCCTCCGAAAACACCCT
CGTCGACGGCTTCCGCGGCATCCCCGACATGGCCGACCGGCTCGGCCTCGTGGCCACCATCCGGGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCTGCCCGCGCGGCCGGAAGCGGGACTCCGTCTACGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGGAGCTCGCGTCCGTCACCGCCGGGGGCGTGGCCGCCAAGAAGGA
CGTCGGCAAGATGACGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCACTGACTACCTGCGCCGCTTCTGCTCCCGGCTCGGCCTGGGCAACCAGGAGGTGCGCGACGCACAGGAGGCCGTGCGG
AGGGTCGAGCAAGGGCTCGACGTGCGCCGCAACCCGGAGTCGGTCGCCGCCGCCATCAGCTTCATGGTCGTGCAGCGCGC
CGGCGCCGGCAGGT---------CCG---------TCAAGGAAGTGTCCGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGTGCACAAGGACCTCACCCCGCACGCCCAGATGCTCTTCGGCTGAGCCTGAG-CGCCCACGACATTA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1B_1013
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCGGACGAGCGCGTGTACTGCCCG
GAGTGCCGCCGCGCGACGGAGGTTGTCCTGGACCACGGCACCGGCGACACCATCTGCACAGAGTGTGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCCGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGCGCCTCCGGCGACCCCTTCCTCGCCGCCAAGCTCTCCACCGTCATCGACTCCTACTACAAGCCCAAAAAGTCCTCC
GCCACCGGCGTGGCGGCCAACGCCCCTCCGAGGATGTCGGTGCCGGACGCGGAG------GCGGCCTCCGATAAGACCCT
CGTCGACGGCTTCCGCGGCATCGCCGACATGGCCGACCGGCTCGGCCTCGTGGCCACCATCCGGGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCTGCCCGCGCGGCCGGAAGCGGGACTCCGTCTACGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGGAGCTCGCCTCCGTCACCGCCGGCGGCGTGGCTGCCAAGAAGGA
CGTCGGCAAGATGGCGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTGAGCG
CCTCCGACTACCTGCGCCGCTTCTGCTCCCGGCTCGGCCTGGGCAACCAGGAGGTGCGCGACGCGCAGGAGGCCGTGCGG
AGGGTCGAGGAAGGGCTCGACGTGCGCCGCAACCCGGAGTCGGTCGCCGCCGCCATCATCTACATGGTCGTGCAGCGTGC
CGGCGCCAGCAGGT---------CCG---------CCAAGGACGTGTCCGTCGCCACCGGCGTTGCCGAGGGCACCATCA
AGGAGGCGCACAAGGACCTCGCCCCGCACGCCCAGATGCTCTTCGGCTGAGCCTGAA-CGCCCACGACATTAACGCTT--
---TTTCTAGCTTGAT----T-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1B_1013
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCGGACGAGCGCATCTACTGCCCG
GAGCGCCACCGCGCGACGGAGGTTGTCCTCGACCACGCCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCAGAGTGGCGCAACTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGCACCTCCGGCGACCCCTTCCTCGCCGCCAAGCTCTCCACCGTCATCGACTCCTACAACAAGCCCAAAAAGTCCTCC
GCCACCGGCGTGGCGGCCAACGCCCCTCCAAGGATGTCGGTGCCGGACGCGGAG------GCGGCCTCAGACAAGACCCT
CGTCGACGGCTTCCGCGGCATCGCCGACATGGCCGACCGGCTCGGCCTCGTGGCCACCATCCGCGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCTGCCCGCGCGGCCGGAAGCGGGACTCCGTCTACGC---------------C
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGCAGCTCGCCTCCGTCACCGCCGGGGGCGTGGCTGCCAAGAAGGA
CGTCGGCAAGATGGCGACGCACATCAAGAAGCTCCTCGGGGAGGAAGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CCTCCGACTACCTGCGCCGCTTCTGCTCCCGGCTCGGCCTGGGCAACCAGGAGGTGCGTAACGCGCAGGACGCCGTGCGG
AGGGTCGAGGAAGGCCTCGACGTGCGCCGCAACCCGGACTCTGTCGCCGCCGCCATCATCTACATGGTCGTGCAGCGTGC
CGGCGCAGGCAGGT---------CCG---------CCAAGGACGTGTCTGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGTGCACAAGGACCTCACCCCGCACGCCCAGATGCTCTTCGGCTGAGCCTGAG-CGCCCACGACATTA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1D_1016
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GACGAGCGCGTGTACTGCCCG
GACTGCCGCCGCGCGACGGAGGTTGTCCTGGACCACGGCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGA
CGCGCACTACATCGACGAGGGTTCCGAGTGGCGCAGCTTCGCCGACGACGGCGGCGGCGAGGACCGCGACCCCAGCCGCG
TCGGCGCCTCCGGCGACCCCTTCCTCGCCGCCAAGCTCGCCACCGTCATCGACTACACCAACAAGCCCAAGAAGTCCTCC
GCCACCGGCGTGGCGACAAAGGCCCCGCCCAGGATGTCGGTGCCGGACGCGGGG------TCGGCCTCCGAAAACACCCT
CGTCGACGGCTTCCGCGGCATCTCCGACATGGCCGACCGGCTCGGCCTCGTGGCCACCATCCGGGACCTGGCCAAGGAGA
CGTTCAAGAAGCTGGACGAGGCCAAGGGCTGCCCGCGCGGCCGGAAGCGGAACTCCGTCTATGCCGCCTGCCTCTACATC
GCCTGCCGCAACCTCGGCATGCCGCGCACGTACAAGGAGCTCGCCTCCGTCACCGCCGGGGGCGTGGCTGCCAAGAAGGA
CGTCGGCAAGATGACGACGCACATCAAGAAGCTCCTCGGGGAGGAGGACGGCCAGGTGATGGACATCGGCGTCGTCAGCG
CATCCGACTACCTGCGCCGCTTCTGCTCCCGGCTCGGCCTGGGCAACCAGGAGGTGCGCGACGCGCAGGAGGCCGTGCGG
AGGGTCGAGGAAGGGCTCGACGTGCGCCGCAACCCGGAGTCCGTCGCCGCCGCCATCATCTACATGGTCGTGCAGCGCGC
GGGCGCCGGTAGGT---------CCG---------TCAAGGACGTGTCCGTCGCCACCGGCGTCGCCGAGGGCACCATCA
AGGAGGCGCACAAGGACCTCACCCCGCACGCCCAGATGCTCTTCGGCTCAGCCTGAG-CGCCCACGACATTA--------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>SNPs
SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------
---S------S---------------------S-------------------S-SSS-SSSSSSS----------S----
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
----------------------S----S----------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------S--------------------------S---------------------
-----------------------------------------------------------------------S--------
-------------------------SSSSSSSSSS-------------------------------------S-------
-----------------------------------------------S-S-----------------------------S
SSS--S----------SSSS-------------------------S---------SSSS---------------SSSS--
------------------S-------------S-SSS-------------------------------------------
--------------------------------------------------------------------------------
-----S---------------SSS---------------------S-------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S------------S-------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------SSSSS-SSS-----------------------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_122
--------------------------------------------------------------------------------
----------------------AAGCATGGACACACTAGGGC--------------------------------------
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------------------------------------------------------------------------
>reverse_1866
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------AACTCCGCCATCAAGGACG------------------------------------
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------------------------------------------------------------------------
>forward_126
--------------------------------------------------------------------------------
--------------------------ATGGACACACTAGGGCCTCT----------------------------------
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------------------------------------------------------------------------
>reverse_1868
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------CTCCGCCATCAAGGACGTC----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGGTCCTTATAGCCGGCTCT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_2766
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------GACATGGGTTGCTGAGGTGA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------
