>input_sequence_63578
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------------------------------------------------------------------------------AT
GGCGCCGGTGAAGGTGTTCGGGCCGGCCATGTCGACGAACGTGGCCCGGGTGCTGCTGTGCCTGGAGGAGGCCGGCGCCG
AGTACGAGGTGGTCAACATCGATTTCAAGGCCATGGAGCACAAGAGCCCCGAGCATCGCGTCAGAA----ACGTAAGATC
CACGACCACTCAAATCCTCTGGTTTCCCGTA------------------TCACATTGTTTTGGCGCTA------------
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ATGCAAGATGTTTTGGTTTCTTTCAGCCGTTCGGCCAAATCCCTGCTTTCCAGGATGGGGATCTGCTTCTCTTCGGTA--
-TGATCAATCACTTTGCCTTTGCTCTTTT-CAGT---TACTTTGTCCTTGTCAAAATAATTGTTAGTTAGTACCTGCTTG
GC-------CTCTGTTTCTCGGCATCTTAACGGGACCGGCTAGCAAAGTGAATGCTTCTTTTTTAAAGAAAGTAG-----
AGTAGTGAAGTGAATTATAGCCCTCAAATTTGTTTCCGATGGACGCTTGGTGT---------------------------
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-------------------CCAAATATCTTATCAAATTCTCAAAAAAAAA-TTGTTTTCTTGTGTTTTCAGAGTCACGCG
CAATTTCAAGGTACGTGCTTCGCAAATACAAGACGAACCAAGTCGACCTGCTGAGGGAGGGCAACCTAAAGGAGGCGGCC
ATGGTGGATGTATGGACGGAGGTCGACGCACACAGCTACAACCCAGCCATCTCGCCGATCGTGTACGAGTGCCTCATCAA
CCCGATCATGCTCGGCCTGCCGACCAACCAGAAGGTGGTGGGCGAGAGCCTGGAGAAGCTGAAGAATGTGCTGGAGGTCT
ACGAGGCACACCTCTCCAAGCACAAGTACCTGGCCGGGGACTTCGTCAGCTTCGCGGACCTCAACCATTTCCCATACACC
TTCTATTTCATGGCCACGCCTCACGCGGCCCTCTTCGACTCGTACCCGCACGTCAAGGCCTGGTGGGAGAGCCTCATGGC
GAGGCCGGCCGTCAAGAAGCTTGCCGCACAAATGGTTCCGAAGAAGCTGTGA----------------------------
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>chr1A_1_TraesCS1A01G078900
GCCAGTTCTTTTGGGCGATTCTAGCAGAATCGCCCCCCTCCCGAGCTTCTCCCAGAATCACTACTCCATATATTTTTTAC
AATCCTAGCTAATTAGACCTTAACTAGATAGGATTGTAAAAAAAATATGGAGTGACGATTCTGGGAGAAGCTGGGGTAGG
GGTAATTTTGGGAGAATCGCTGAAAAGAACTGGCCCTTAATGTCAGCTAAATAGACATGTACACATGTAACCTCAATAAT
TAAATAAAATCAATCATATTTATTTTTTAGTTTTACTTCTCATATTACCAAGCAAATAATCATGTTTTATAAAATCAAAT
CTCATCAAAATATATTGTGACCAATTCCCGCAGCAACGCATGGGGGATTACTAGTTAATGAAATGATACGCAACATGCGT
ATTTGTGGAAAAAAAATTGGGCTGAAAGAAGGAATGCCTGGGTAGCTCCGCCCGATGAATCGTGGCCGCTATTCCAGAAA
CATCACGAAAAGTAATACTCCCTCCATTCCAAAATATAGTGCGCCTGCACTTCCCAAGGTCCAACTTTGACCCTAAATTT
AACTAACGAGACCAACTGCGGCGGGAGAAAAAATTATATAATTGAAAACTTCTTTCGAATACGAATTCGCTGATATAATT
TTTGCTCCTGCCGCAATCGGTCTTGGTAGTTAAATTTACGGTCAAAGTTGAAGCACGTGGATAGAGGAAACACTACATTG
TGGAATGGAGGGAGTAGCACCGAACTCGCTGACCCAAGCCGTGATGCACTAATTGACCGGCCCCGT-ACCGCACACCTCA
CGACCTCC---T-CTTCACCCTTCCGGAGAGCTTACGTCCCAACCTCCCG----------------CCAACCACTACTC-
GGAAACGCAGACGCCGTATAAGAAGGGAAACGAGTTGGCGTCATGCTGCACACCGCTCGGACGCAGGTAG---TACACAA
ACACCAGAAACATACACACGCACACCCCGA--TCTCACTCTCTCGAGTGTACT--------AGCAACCAAG---GAAAAT
GGCGCCGGTGAAGGTGTTCGGGCCGGCCATGTCGACGAACGTGGCCCGGGTGCTGCTGTGCCTGGAGGAGGCCGGCGCCG
AGTACGAGGTGGTCAACATCGATTTCAAGGCCATGGAGCACAAGAGCCCCGAGCATCGCGTCAGAA----ACGTAAGATC
CACGACCACTCAAATCCTCTGGTTTCCCGTA------------------TCACATTGTTTTGGCGCTA------------
--------------------------------------------------------------------------------
ATGCAAGATGTTTTGGTTTCTTTCAGCCGTTCGGCCAAATCCCTGCTTTCCAGGATGGGGATCTGCTTCTCTTCGGTA--
-TGATCAATCACTTTGCCTTTGCTCTTTT-CAGT---TACTTTGTCCTTGTCAAAATAATTGTTAGTTAGTACCTGCTTG
GC-------CTCTGTTTCTCGGCATCTTAACGGGACCGGCTAGCAAAGTGAATGCTTCTTTTTTAAAGAAAGTAG-----
AGTAGTGAAGTGAATTATAGCCCTCAAATTTGTTTCCGATGGACGCTTGGTGT---------------------------
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-------------------CCAAATATCTTATCAAATTCTCAAAAAAAAA-TTGTTTTCTTGTGTTTTCAGAGTCACGCG
CAATTTCAAGGTACGTGCTTCGCAAATACAAGACGAACCAAGTCGACCTGCTGAGGGAGGGCAACCTAAAGGAGGCGGCC
ATGGTGGATGTATGGACGGAGGTCGACGCACACAGCTACAACCCAGCCATCTCGCCGATCGTGTACGAGTGCCTCATCAA
CCCGATCATGCTCGGCCTGCCGACCAACCAGAAGGTGGTGGGCGAGAGCCTGGAGAAGCTGAAGAATGTGCTGGAGGTCT
ACGAGGCACACCTCTCCAAGCACAAGTACCTGGCCGGGGACTTCGTCAGCTTCGCGGACCTCAACCATTTCCCATACACC
TTCTATTTCATGGCCACGCCTCACGCGGCCCTCTTCGACTCGTACCCGCACGTCAAGGCCTGGTGGGAGAGCCTCATGGC
GAGGCCGGCCGTCAAGAAGCTTGCCGCACAAATGGTTCCGAAGAAGCTGTGATTTGCTAGGCAGGGTTTTGCATCATGGG
ATCGGATC------TCTGATCTGTATGGCA-----TTTTCTTGTCGGTGTCGCTAATAAGGCAATAAGCT----------
---TGTGT--GTGGCTGGAATTGCACCAGCGTGCGGTTTTTGTGCTTTG----CGTGTGCGTGGTCGTGGAAACTC----
---------------------TTGAGATGGAACAATGTCTTC-ATAATGCG-----------------------------
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-------------------------------------------TTCAGATTTGTTGCTTGGCAAGCC-TTAAATAAGATG
TTTGTGT--------GTCTCTCTAGTCGATGATGTTTGCATGGTTTCTAACTCCCGTATTG-AAATATATTTGCCACCAC
TGAATATTTTGAAGAAAAAAA-TCAGTTTGCATTTCGGCAAAGCACCGAATGGAATTTTT--TTCACTTGATATCGATTA
AAATCTGGCTAAACTTAAAGATTTCAAAAATAATAATTGTATTTTTCACCTAAGAAGTCTGTAGCTTCCGATCTAAAAAT
ATGGTGGAAAAAAAACCCTTATATACTACCCCGTTTCAAAATATATATAAGGCTTTCAAAATATAAGGCTTTTTAGAGAT
TTTAATACAGACAATATACGGATGTATATAGATATATTTTAGTGTATAGATTAATTCATTTATGTATTTTAGTATGTAGT
CTATATTCAAATCTTTAAAATGACTTTTTTCGAGGAAGGTCATCATGGCTAGCTTCATTGATTATTAAGCAACATTACAT
CATCCACGAGCTTAAGTATAATCAGCTGGGGGAACATCGTCCCAATTACAAGATAATTTATTCAAAAAACTATGTCTAGC
TAGCTTATGAGCAACACTGCTGGCTTTTCTAGGACAATGAATAAAGTCTGACCTTCCCAATCATGAAAACCACGACAACG
CATTCTGCATAAATAGCTGCTGCTGGATCTCATCATTATGATTGTCCAGTGCAAAAATTAATGACTTCAGTTGAATCGGA
CTCAGCTGTAACTCTTTGAAACCTCATAAAGTTAGGCAATATCAGCCCCTCTTTCATAGCCGTTGCCTCCATT
>chr1A_737
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----------------GCACCCACCTCGCTGACCGGAGCCGTGATGAACTAATTGACTGCACCCGTCAGCCCACACCTCA
CGGTCTCC---C-CTTCAACCTTCTGGAGAGCTCACGTCCAACCATCCCACCATCCCACCAAGGCACCAGCCACCTACCC
GGACACTTTGATGCCGTATAAAATGGGGAG-GAGTTTGCGTCATGCTGCACACCGCTCAA-----CACAGCAACACACTA
ACAC-----------------A-A-CCCGATCTCTCACTCTCTCGCGTGTAG--------CAGCAACCAAGGGAAAAAAT
GGCGCCGGTGAAGGTGTTCGGGCCGGCCATGTCGACGAACGTGGCCCGGGTGCTGGTGTGCCTGGAGGAGGTCGGCGCCG
AGTACGAGGTGGTCGACATCGATTTCAAGGCCATGGAGCACAAGAGCCCCGAGCATCTCGTCAGAA----ACGTAAGCTC
CCCGACCACTCAAATCCTCTGGTTTCTCGTA------------------TCAGCTTGTTTT-------------------
-------------------------------------------------------------------------GGTTCTG
ATGCAAGATGTTTCGATTTCTTGCAGCCGTTCGGCCAAATCCCTGCTTTCCAGGATGGGGATCTGCTTCTCTTCGGTA--
-TGATTAGTT----------TGCCTTTTT-CAGT---TACTTTGTCCTTGTCAAAAGAAATGTTAC-------TTGCTTG
GC-------CTCTGTTTCGCGGCATCTTAATGGGACCGACTAGTAAAGCTAATGCTTCTTTTCAAGGGAAGTACTAGACT
ACTAGGAAAGTGAATTGTTTCCC---------------GTGGATGCTCGATGT---------------------------
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-------------------TCAAACATCCTCTCAAATTCTCTAAAACCTCGTTGTTTTGTTCTATTTTCAGAGTCACGCG
CAATTGCAAAGTACGTGCTTCGCAAGTACAAGAAGAACGAAGTCGACCTGCTGAGGGAAGGCAACCTCAAGGAGGCCGCC
ATGGTGGATGTATGGACGGAGGTCGACGCGCACACCTACAACCCGGCCATCTCGCCGATCGTGTACGAGTGCCTCATCAA
CCCGCTGATGCGCGGCCTGCCGACCAACCAGACGGTGGTGGACGAAAGCCTGGAGAAGCTGAAGAAGGTGCTGGAGGTCT
ACGAGGCGCGCCTGTCCCAGCACGAGTACCTCGCCGGGGACTTCGTCAGCTTCGCCGACCTCAACCACTTCCCCTACACC
TTCTACTTCATGGCCACGCCTCACGCGGCGCTCTTCGACTCGTACCCGCACGTCAAGGCTTGGTGGGAGAGGCTCATGGC
GAGGCCGGCCGTCAAGAAGCTCGCCGCACAAATGGTTCCCAAGAAGCCGTGATTTGCTAGGCGGGATTTCGCATCGTGGG
ATCCGATTCCGATCACTGATCTGCGTGGCG-----TTTTCTTGTTGGTGTCGCGAATAAGGCAATGAGCT----------
-----TGT--GTGGCTGGAATTGCACCAGCGTGCAGTTTTTGTGCTTGCGTATCGTATGTGTGGTTGTGAAAACTC----
---------------------TCGAGATGGAATAATGTCTT---------------------------------------
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------------------------------------ATAAGGCTTTCGATGTGTTGCTTGTCAAGCCTTTAAATCAGATG
GTTGTAT--------GTCTTCCTAGTCATAGATG----------------------------------------------
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-------------------------------------------------------------------------
>chr1B_737
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----------------GCACCCACCTCGCTGACCTGAGCCGTGATGCACTAATTGACTGCACCCGTCAGCCCACACCTCA
CGGTCCCC---CTCTTCACCCTTCTGGAGAGCTCACGTCTAACCATCCCAC--------CAAGGCACCAACCACCTACC-
GGAAACTTAGATGCCGTATAAAATGGGGAG-GAATTGGCGTCATGCTGCACACCGCTCAAACACAGATAG---CACACAA
ACAC-----------------ACA-CCCGATCTCTCACTCTCTCGCGTGTACTCCGCGAGTAGCAACCAAGGGAGAAAAT
GGCGCCGGTGAAGGTGTTCGGGCCGGCCATGTTGACCAACGTGGCCCGGGTGCTGGTGTGCCTGGAGGAGGTCGGCGCCG
AGTACGAGGTCGTCGACATCGATTTCAAGGCCATGGAGCACAAGAGCCCTGAGCATCTCGTCAGAA----ACGTAAGCTC
ACCGACCACTCAAATCCTCTGGTTTCTTGTA------------------TCAACTTGTTACGGTCCTGTGGAAACTGTCC
AGCTAGCTGCTGATGATTGTAATTCTATGAGTTGAGTAATACAAGTTATTCACCCGCAAAAGAAACTTGTTACGGTTCTG
ATGCAAGATGTTTTGGTTTCTTGCAGCCGTTCGGCCAAATCCCTGCCTTCCAGGATGGGGATCTGCTTCTCTTCGGTA--
-TGATTAATT----------TGCCTTTTTTTAGT---TACTTTGTTCTTGTCATAGTAAATGTTAA-------TCGCTTG
GC-------CTCTGTTTCTTGGCATCTGAATGGGACCGGCTAGTAAAGCGAATGCTTCCTTTTTGTTCCGGTG-------
-------------------------------------GATGGATGCTCGTTGT---------------------------
--------------------------------------------------------------------------------
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-------------------TCAAATATCCTCTCAAATTCTCAAAAGCATTCTGTTTTTGTTGTGTTTTCAGAGTCACGCG
CAATTGCAAAGTACGTGCTCCGCAAGTACAAGACGAACGGAGTCGACCTGCTGAGGGAAGGCGACCTGAAGGAGGCGGCA
ATGGTGGACGTATGGACGGAGGTGGACGCGCACACCTACAACCCGGCCATCTCGCCGATCGTGTACGAGTGCCTCATCAA
CCCGCTCATGCGCGGCCTGCCGACCAACCAGACGGTGGTGGACGAGAGCCTGGAGAAGCTCAAAAAGGTACTGGAGGTCT
ACGAGGCACGCCTCTCCCGGCACGAGTACCTGGCCGGGGACTTCGTCAGCTTCGCGGACCTCAACCACTTCCCCTACACC
TTCTACTTCATGGCCACGCCGCACGCGGCCCTCTTCGACTCGTACCCGCACGTCAAGGCATGGTGGGAGAGGCTCATGGC
GAGGCCGGCCGTCAAGAAGCTCGCCGCGCAAATGGTTCCCAAGAAGCCGTGATTTGCTAGGCGGGATTTCGCATCGTGGG
ATCAGATT------GCTGATCTGTATGACG-----TTTTCTTGTTGGTGTCGCGAATAAGGCAAATGAGCTCGTGTGTGT
GTGTGTGT--GCGGCTGGAATTGCACCAGCGTGCAGTTTTTGTGCTTTG----CGTGTGTGTGGTCCTGGAAACTCTTGA
GATATGTTCAAAAAAAAAAAATTGAGATGGAACAATGTCTTC-GTAATGCT-----------------------------
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-------------------------------------------TTCAGATTTGTTGCTTGTCAAGCC-TTAAATAAGATG
TTTGTGTCATTGTGTGTGTTTCTAGTCGATGATGTTTGCATGGTTTCTAATTCCCGTATTGAA-----------------
---------------ATTTATTT---------------------------------------------------------
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-------------------------------------------------------------------------
>chr1D_737
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----------------GCACCCACTTCGCTGACGCGAGCCGTGATGCACTAATTGACTGCACCCGTCACCCCACACCTCA
CGGTCTCC---C-CTTCAACCTTCTGGAGAGCTCACGTCCAACCATCCCAC--------CAAGGCACCAACCACCTACCC
GGAAACTTTGATGCCGTATAAAATGGGGAG-GAGTTTGCGTCATGCTACACACCGCTCAAACAAACACAGTCACACACAG
ACAC-----------------ACACCCCGATCCCTCACTCCCTCGCGTGTAC--------TAGCAACCAAGGGAAACAAT
GGCGCCGGTGAAGGTGTTCGGGCCGGCGATGTCGACCAACGTGGCCCGGGTGCTGGTGTGCCTGGAGGAGGTCGGCGCCG
AGTACGAGGTGGTCGACATCGATTTCAAGGCCATGGAGCACAAGAGCCCCGAGCATCTCGTCAGAA----ACGTAAGCTT
CCCGACCACTCAAATCCTCTGGCTTCTCGTA------------------TCAACTTGTGTTTG-----------------
-------------------------------------------------------------------------GGTTCTG
ATGTAACATGTTTTGGTTTCTTGCAGCCGTTCGGCCAAATCCCTGCCTTCCAGGATGGGGATCTGCTTCTCTTCGGTACT
ATGATTAATC----------TGCCTTTTT-CAGTTACTACTTTGTCCTTGTCAAAATAAATGTGAA-------CTGCTTG
GC-------CTCTGTTTCTCGGCATCTTAATGGGGCCAACTAGTAAAGCGAATCCTTCCTTTCTGTTCTGGTG-------
-------------------------------------GGTGGATGCTCCGTCT---------------------------
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-------------------CCAAACATCCTCTCAAATTCTCAAAAACATTGTGTTCTTGCTCCGTTTTCAGAGTCACGCG
CAATTGCGAGGTACGTGCTCCGCAAGTACAAGAAGAACGAAGTGGACCTGCTGAGGGAAGGCGACCTCAAGGAGGCGGCG
ATGGTGGACGTATGGACGGAGGTGGACGCGCACACCTACAACCCGGCCATCTCGCCGATCGTGTACGAGTGCCTCATCAA
CCCGCTCATGCGCGGCCTGCCGACCAACCAAACGGTGGTGGACGAGAGCCTGGAGAAGCTCAAGAAGGTGCTGGAGGTCT
ACGAGGCGCGCCTGTCCAAGCACGACTACCTCGCCGGGGACTTCGTCAGCTTCGCGGACCTCAACCACTTCCCCTACACC
TTCTACTTCATGGCCACGCCGCACGCGGCCCTCTTCGACTCGTACCCGCACGTCAAGGCCTGGTGGGAGAGGATCATGGC
GAGGCCGGCCGTGAAGAAGCTCGCCGCGCAGATGGTTCCCAAGAAGCCGTGATTTGCTAGGCGGGATCTCGCATCGTGGG
ATCCGATTCCGATCACTGATCTGTGTGGCGTTTTCTTTTCTTGTTGGTGTCGCGAATAAGGCAAATGAGCTCG------T
G--TGTGT--GTGGCTGGAATTGCACCAGCGTGCAGTTTTTGCGCTTTG----CGTGTGTGTGGTCGTGAAAACTC----
---------------------TTGAGATGGAACAATGTCTTC-GTAATGCT-----------------------------
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-------------------------------------------TTCAGATTTGTCGCTTGGCAAGCC-TTAAATAAGATG
TTTGTGT--------GTCTTTCTAGTCGATGATGTAAGCATGATTTCTAATTCCCGTATTG-AA----------------
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>chr1B_770
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-------------------------------------------------TAATTGACTGCACCCGTCACCCCACACCTCA
CGGTCCCCTGCT-CTTTCACCCTTTGGAGAGCTCACGTCCAACCATCCCAC--------CAAGGCACCAACCACCTA-CC
GGAAACTTAGATGCCGTATAAAATGGGGAG-GAGTTGGCGTCATGCTGCAGACCGCTCAAACACAGATAG---CGCACAA
ACAC-----------------ACA-CCCGATCTCTCACTCTCTCGCGTGTA-----------GCAACCAAGGGAGCAAAT
GGCGCCGGTGAAGGTGTTCGGGCCGGCGATGTCGACGAACGTGGCCCGGGTGCTGGTGTGCCTGGAGGAGGTCGGCGCCG
AGTACGAGGTGGTCGACATCGATTTCAAGGCCATGGAGCACAAGAGCCCCGAGCATCTCGTCAGAA----ACGTAAGCTA
CCCGACCTCTCAAATCCTCTGGTTTCTCGAA------------------TCAACTTGTTTT-------------------
-------------------------------------------------------------------------GGGTCTG
ATGCAAGATGTTTTGTTTTCTTGCAGCCCTTCGGCCAAATCCCTGCCTTCCAGGATGGGGATCTGCTTCTCTTCGGTA--
-TGGCC---T----------TGGCTCTTTTCAGT---TACTTTGTCCTTGTTAAAATACTCCCTCCGTCCG---------
--------------------------------------------AAAATGAATGCTTC-TTTTTAAGGAAAGTAG-----
AGTATTGAAGTGAATGATAGCCTTCAAATTTGTTTCCGATGGACGCTCGGTGT---------------------------
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-------------------CCAAATATCTTATCAGATTCTCAAAAACATTTA-GTTTTCTTGTGTTTTCAGAGTCACGCG
CAATTGCAAAGTACGTGCTCCGCAAGTACAAGAAGAACGAAGTGGACCTGCTGAGGGAAGGCAACCTGAAGGAAGCGGCA
ATGGTGGACGTATGGACGGAGGTGGACGCGCACACCTACAACCCGGCCATCTCGCCGATCGTGTACGAGTGCCTCATCAA
CCCGCTCATGCGCGGCCTGCCGACCAACCAGACGGTGGTGGACGAGAGCCTGGAGAAGCTCAAGAAGGTGCTGGATGTCT
ACGAGGTGCGGCTGTCCAAGCACGAGTACCTCGCTGGGGACTTCTTCAGCTTCGCGGACCTCAACCACTTCCCCTATACC
TTCTACTTCATGGCCACGCCGCACGCGGCCCTCTTCGACTCGTACCCGCACGTCAAGGCCTGGTGGGAGAGGATCATGGC
GAGGCCCGCCGTCAAGAAGCTCGCCGCACAAATGGTTCCCAAGAAGCCGTGATTTGCAAGGCGGGATTTCGCATCGTGGG
ATGAGATC------TCTGATCTGTGTGGCG-----TTTTCTTGTTGGTGTCGCGAATAAGGCAAATGAGCTCG------T
GTGTGTGT--GTGGCTGGAATTGCACCAGCGTGCAGTTTCTGGGCTTTG----CGTGTGTGTGGTTGTGGAAACTC----
---------------------TTGAGATGGAACAATGTCTTC-ATAATGCTTCCATATTTGTTGCCAAGTTATTTTTGTA
GGGATGAACAAAAATTCTGTTTGCCATGATTTTGTAGGGATAATCTTCCTAACTATATGATTTTGTACGGATGAACTTTC
TTTTGCCATGTTATTTTGAGAAGACATGATTACTTTGATTAGTATGCTTGAAGTGTTACTATTTTTTTCATCAATATAAA
CTTTTATTTTGAATCATTTGGATCTGAACATTCATGCCGCAATAAAGAAAATTACTTTGAGAATCATGCTAGGTAGCATT
TCACATCAAAAATTCTGTTTTTATCATTTACCTACTCGAGGACGAGCAGGAATTAAGCTTGGGGATGCTTGATACGTCTC
CAACGTATCTATAATTTTTTATTGTTTCATGCTATTATATTACCTGTTTTGAATGATTATGGACTTTATTATACACTTTT
ATATTACTTTTGGGACTAATCTATTAACCGGAGGCCCAGCCCATATTGCTGTTTTATTGCCTGTTTTAGTATTTCGAAGA
AAAAGAATATCAAACGGAGTCCAAACGGAATGAAACCTTCGGCAACGTGTTTTTTTTGAAAGATTATCATCCTGAAGGCT
TGGAGATCAAGTCGAAAGATCCTCGAGGAGCCCAGGAGATAGGGGGTGCCCCCCCTACAGGGCGCGACCCCCTATCTCGT
GGACCCCTCGAGCACCCCCCGACCGACTTCCTTCGCCTATATAACCCTACGTACCCTAAAACTATCATATATCAAGATAG
ATCGGTAGTTCTGCCATCGCAAGCCTCTATAGTCACCAAAAACCTCTCGGGAGTCCGTTCCGGCACCCTGCCGGAGGGGG
AATCCATCATCGGTGGCCATCTTCATCATCCCGGCGCTATCCATGACGAGGAGGAAGTAGTCCACCCACGGCTGGCAAGC
TTTAAATAAGATGTTTGTATGTGTTTCTAGTTGATGATGTTTGCATGGTTTCTAATCCCCGTATTGAATTTTTTTTGCCA
GCACTGAATATTTTGAAAAAGCAAATCCGTTTGTGTTCAGCAAAGCACTGAACGAAAAATAAAGTTCACGGTTAAACTTG
AGGAACTTTTAAAAGAATCACTTAAGAAGCTGGTAGCTTCCGATGTAAAAATATGGAGGTGTACTTACAAAGGGTAATTT
GGTGTAATCAATCAAATATATCCACTACTGCTTATAAAAGCACGAGTTTGATGAATGCAAATGATTCAAGCAAGTGTGAA
CCAATATGTGGTTGGATAGTTAGGAGAACGGTGGTATCTCAAGCCAGTTTTGAGTCCTAAATTTGACACTGCTGCTCGGC
AGATGGCTCGTCGGGGCCTTCGGCTTTAGATATTAGGCTTAGGTGAGAGGTATGGGTATGTGGCCCAGCTTGCATCCCTT
CATCATTTGGATAGCAGTAGCGGCAGATGCTGCTAAGTTGGCGGATTCAGGCATATTATTGTTATACTTTGTAAGGTCCT
CGAGAATAATCAATAAAATGGCCGTATGCATCTCCCAGATGCAGAGGCCGGGGTTCATCCTCTTTTTTGAAGAAAAAATA
TGTTTTTTTAATTTATTTCAGGCCTTTCTGTGATATGCGTTTAGTGTGAGGAGACGTTTCCATCGACAAAGAATGTGTTT
GTGACGACTTTGTCACTATCAAGATAATGTGTCATCTCAGACAATCAAAGATGCTCATATGGCTAGAGTGTGTGTTCATG
TGGCGATGAGCGTTTACGTCTGTACAGTGTTAAAGAAAACTCCAAGATAACATTGTTAAAAAAAAGTTCCAAGATTACTA
GCCTCCTGGCCATGTTGCTTCACGCCTCGAGTTTATTCAAATTATAGTTCTCTGGGCCTTGCATTTATTCCTTTTATTTT
TGTGACCCTCTCCATATTTAACTTGATTTACGATATTTTCTTAGAATTTTCCTGATAGTTTATATGTATTTTTTGATTTT
TTAATAATTTCCAAATATACATCAAAGCCTGTCTTGTGACGTGTCATTGCTTTTTTTTAAGGTAATGGCATGCCATTGCT
AAGCTCCTAATTGGCGTCTTATACATCAAAGCCCTTATAATGATTCAGATTTGTTGCTTGGCAAGCC-TTAAATAAGATG
TTTGTGT--------GTCTTTCTAGTCGAAGATGTTTGCATGGTTTATAATTCCCGTATTGGATTTTTTTTTGCCACCAC
TGAATATTTTGAAAAAGCAAA-TCAGTTTGTG-TTCGGCAAAGCACTGAACGAAAAATAAAATTCACTTGATAGTGATTA
AAACACGGCTAAACTT----------------------------------------------------------------
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>chr6D_992
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------------------------------------------------------------------CCAAG---GAAAAT
GGCGCCGGTGAAGGTGTTCGGGCCGGGCAAGTCGAGGAACGTGGCCCGGGTGCTGATGTGCTTGGTGGAGGTCGGCGTCG
AGTACGAGGTCGTCGACATGGATTTGAAGGCCCTGGAGCACAAGAGCCCCGAGCATCTCGCCAGAAACGTACGTAAGCTC
CCCGACGACTCAAATCCTCTGCTCCCTCTTCCTTGATTTCGGCCATTTTTCAACTGATGTTTTTTGCACG----------
--------------------------------------------------------------------------------
------GATGTTTTAATTTCTTGCAGCCGTTCGGGCAAACCCCTGCTTTCCAGGATGGGAATCTAATTCTCTTCGGTA--
-TGATCAATTTGCT--------------------------TTTGTCCTTGTCAAAATAAATGTGAC-------TTGGTGC
AGAGGCTTGCTCTGTTTCTCGGCATCTTAAAGGACC--------------------------------------G-----
AGTAGTAAAGTGAATGTTAGCCTTCAAATTTGTTTCCGCGTATGCTTTCTTTAAGTCATTTGCAGATCAGCAGAGCCTTA
GTAAACTATTCAAGGGTAAGTATCACATGAAAGACTATTGCTGCCTAAAGAATATTACAAATTTGGAGCATGGATTAGAC
AATTTTGGGGCATCAATACTGTTTAGGAGTCCAGGACAGCCTTTTCACACATTAATTGATGTGTTCCTGTTATCAACCAG
ATAGATCGGAGGGAGGTTAGCAAGAGCAGAGGCCAGGGTCTGATATTATTAGGCTACCAAACGTTTCATATTGATGCTAC
GCCATACACATTAGCTCACCCAAATATCCGCTAAATTTCTCAAACT-----TTGTATTTTTGTTCTCTCAGAGTCGCGCG
CAATTTCAAGGTACGTGCTTCGCAAATACAAGACGAACGAAGTCGACCTGCTGAGGGAAGGTAACCTGAAAGAAGCCGCG
TTGGTGGATGTATGGACCGAGGTCGATGCCCACGCCTACAACCCAGCCATCTCGCCTGTAGTGTACGAATGCCTCATAAA
CCCGCTCGTGCTCGGCATACCCACCAACCAGAAGGTGGTGGACGAAAGCATAGAGAAGCTGAAGAAGGTGCTGGAGGTCT
ACGAGGCGCATTTGTCCAAGCACAAGTACTTGGCGGGGGATTTCATCAGCTTTGCGGATATCAACCATTTCCCCCACACT
TGCTCCTTCATGGCGACGCCTCACGTGGTCCTCTTCGACTCGTATCCTAACGTGAAGGCATGGTGGGAGAGACTGATGGC
AAGGCCATCGATCAAGAAGCTCAGCGCAAGCTTGGCTCCACCAAAGGCATGC-TTTGTAGGGGATATTTGGCATTCTGGG
ATCACACC------ACTGATTTGTATGGTG-----CTCTCTTGCTGGTATCGCTAATAAGGCAATAAGCT----------
---TTGTGTCGTCGCTAGAATTGCACGAGTGTGCAGTTTTTGTGCTTGCGTATACGTTGTTGT------GAAGTTC----
---------------------TGTAAATGGAACCATGTATCTTATAATGCT-----------------------------
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-------------------------------------------TTCAGATTTGTTGCTTGTCAAGTC-ATAAATCAGAAG
TTAGTAT--------GTCTGTTCTGGAGCAAATGTAAGCATGGTTTCTAATCTTGGTTTCAAAAATATTTTAGACATAAC
TGACTTTTTAAAATCATTTATTTCAGCTTGTATTTCGGCAAAGCACCAAATGGAA-------------------------
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-------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-----S-S-----------S---------------------S-SS---------S---------
--SS--------------------S--------S------S-S-S----S------------------------SSSS--
------SS---S---------S-S---S-SS---------------------------SS--S---S------S------
----SSSSSSSSSSSSSSSSS------------------------S----------------------------------
-------------------------------------------------------S---------------S--------
--------------S------------------------------------------S-------------------S--
-S------------------------S-------------------------SS---------SS---------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
----------SSS-SSSSSS---SS----------------------------------------SS-SSSSS-------
------------------------------S------------S----------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-SS------------------------------
--------------------------------------S-------------------S--------S------------
-----------------------------S----S---------------------------------------------
----S------------------------------------S------------------------S-------------
-------------------------------------------------------------------------S------
-----S-----------------------------------------------------------------S--------
---------------------S-----------------S-------S--------------S--S---S-----S----
---S-------------------------S--------------S-----------------------------------
----------------------------------S------------------------S--------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------S-----------------S-----------
-------------S--SS------------S------------------------SS-SS-------------SS-----
---SSS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_164
--------------------------------------------------------------------------------
----------------------------------------------------------------GAGAAGCTGGGGTAGG
GGTA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_1510
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GTACCTGCTTG
GCCTCTGTT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_658
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
TTTGCTCCTGCCGCAATC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_5230
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TCGAGGAAGGTCATCATGGC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
