>input_sequence_63564
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------ATGGGGGAGAGGGTCAAGGGAACCGTGAAGT
GGTTCAACGTCACCAAGGGGTTCGGCTTCATCTCCCCGGACGACGGCGGCGAGGACCTTTTCGTCCACCAGTCCTCCATC
AAGTCCGACGGCTACCGCAGCCTCAACGAGAACGACGCCGTTGAGTTCGAGATCATCACCGGCGACGACGGACGCACCAA
GGCCAACGACGTCACCGCACCGGGAGGAGGGGCGCTCTCCGGCGGCTCCCGCCCTGTCGAAGGCGGTGGTGACCGCGGGG
GCCGTGGCGGCTACGGAGGCGGCGGCGGTGGCTACGGCGG------CGGCGGTGGCGGCTACGGAGG---CGGTGGTGGC
GGCTACGGCGGTGGCGGTGGCGGCTACGGTGGCGGTGGCTATGGAGGCGGCGGTGGCGGCGGCCGTGGGTGCTACAAGTG
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GCGAGGAGGGCCACA
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGAGGCGGCGGCGGCGGCGGCGGCCGTGAGTGC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCC
AGGGACTGCCCCCAGGGCGGC------GGCGGCGG---CGGTGGCTACGGAGGCGGTGGCGGCCGTGGTGGTGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCTGGCCACTTCTCCCGCGAGTGCCCCAACAAGGCCCACTAG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr1B_1_TraesCS1B01G273000
GCGTCATGGTGCTATTATCAAGGAAGTTCAGGCTCGATCAGAGGAGTTCGAAATCTGCAAGGTGAAATTTTGAAGCAG--
--------------------------------------------------------TAGAATAATCCGAGGCACGTAGTT
GATATACCGAGGACCAAACAATCATACGAGACATGACACCGAGA-------------TTCACCATCATGACTACATCTCA
GGGCTTGACTATAGGCACTCCTCCTCACCATACCGCTACAACATCGCACCTCGCCCTTCCGGGCGCCGACACACGCCGTC
GGCTCCCCCCTACGTGTCTTGCTATTATTTTGGCACATGTATATAAGATGCCTAGAATACAAATGGCTTGTTAGGACATG
ATGACTCAATATTATATCTACATACCATACGACTCAGAGTTCAATTGTAATCCATCTTTATACACAACATGCGACACAAG
TCTAACAACTTTCGCATCAACATGACATTGTAACAGTTCTTATGGACCTCGTTGATCAATGAAGCAACGTCGCT-CCCTA
ATAGATAAAAAAGACAAGTTAACATAGAGGTCTCGCGTCGCGCTACGCATGGAAAATGGAGCACCCGGACATGAACGACT
TGCAAGTGCCAAGCAGGCCTGCTCAGCTACGTGCCAAGTTCTTTGAGCAAGTGTACTGCTATTACCATCGTCCAAATTTA
CGTGTCTTAAAATTTATCTAATACTAAAATATGTCTAGATATTATCCGTATCTAGGCAAATCTAAAACAAATAATTCAGG
ACGGATGGAGTATTATACAGGCAAAGCCACTATGGTGATCTTTTATTTTTTTTGCTAAAAAAAA-----AGAAGGC-AAA
GCCACTCTGGGCAGTGAAGCCAGTAGGCCCAGTTTAACTGTGTGGTTGGGCCACTGTTTGCCCCCGCCCCCCTGCAAAGC
CACTGTACAAGCCCAACTAAGAGGCCTATTTATATCGA--------CCCCCACCTCCTCCCTCAGCATCCACACCGATCT
AGGGTTTCCTGCTAGGGTTTTGGTCCTTTGTTTT---CGGCGGCGCAAGATGGGGGAGAGGGTCAAGGGAACCGTGAAGT
GGTTCAACGTCACCAAGGGGTTCGGCTTCATCTCCCCGGACGACGGCGGCGAGGACCTTTTCGTCCACCAGTCCTCCATC
AAGTCCGACGGCTACCGCAGCCTCAACGAGAACGACGCCGTTGAGTTCGAGATCATCACCGGCGACGACGGACGCACCAA
GGCCAACGACGTCACCGCACCGGGAGGAGGGGCGCTCTCCGGCGGCTCCCGCCCTGTCGAAGGCGGTGGTGACCGCGGGG
GCCGTGGCGGCTACGGAGGCGGCGGCGGTGGCTACGGCGG------CGGCGGTGGCGGCTACGGAGG---CGGTGGTGGC
GGCTACGGCGGTGGCGGTGGCGGCTACGGTGGCGGTGGCTATGGAGGCGGCGGTGGCGGCGGCCGTGGGTGCTACAAGTG
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GCGAGGAGGGCCACA
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGAGGCGGCGGCGGCGGCGGCGGCCGTGAGTGC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCC
AGGGACTGCCCCCAGGGCGGC------GGCGGCGG---CGGTGGCTACGGAGGCGGTGGCGGCCGTGGTGGTGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCTGGCCACTTCTCCCGCGAGTGCCCCAACAAGGCCCACTAGGCGGCGCAGC
TCGTCAGATCTGAGTGCCCCGTTTCCTTTCGCTCCTTTACCTACCTCTTGATTCTGCAGCAAGTCATACCCTATACCTAT
CAGTACTAGTATTAGTCGCCGTAGCGTTTCCCCCTGCTGCT-----------------CGATGCGAGCTTGGTTTCAGAA
GAATTGCTGGTGGTGTGTTCGT---TAAGATCCAAGTTATTTTGTTGTCTC-TCTGTGATGAGGACACAGATCTATCTAT
GTGTTGG-------ATGGACTAAGTTATCGAAGTC-AAGTT-TGGTGTCTTAAGATTGATCTATGATCTTGCATGTCTAT
TGTTTATCTTGCATATCTGCCAGGCTTGAAAGTGTTGATTCTGATATTCTATTCTAGCTTA---GTGGTGGATTATTTTG
GAATCCTGTTCTCCCATTTCAATGTGATTCCATTGGCGTTTTGATAGTGGGTACGATTCGCAAGTTTGATGCTT----TT
CAACAGTTTCATGGTTCAAAATCTTTCTTAAATAAGGTCCATTCTTATATGTGCTTGTGCCACTGTAGACCTGCACTGCT
TGTCTGACTGCTACTACTAGTTTCTTCTCGTGCCACTTGCTTGCAAAATGTAACCTAGCTTAATATTTTTGCATCCGTGT
TAAGCAAGATTCGATGATTCCTTGCCATGATGGAAGGCAAATTCAATCAGTTCTGCTGTCAAA-----------------
---TTCATTATAAGCTTAATCTGAATTCAGCAGTCT----CTTAAGAAAGAAGGCACGTTAGCTTACTGATTAAGCCTAA
CGCTCCGTTGCAGCTTAGTGGAGAGAGTGTGCTTTGTCTTGGATGAACGGAATGGAATCATGTCGCTTTAGACTTACGTG
-TGCGAAGAATAACAGCCTAAATTTAGATCTCCTTAAACATATATGACT--GAACCCACGAACTATGATTACGATGACTT
ATTATCTGCGGCTTTTTAGCATAAATTTAATAGCTGTGAGCTTACGATGACTTGTTATCTGCGGCTTTTTAGCATTTTTC
ATAGGAAATTCAAT
>chr1D_1
GCGTCATGGTGCTATTATCAAGGAAGTTCACGCTCGATCAGAGGAGTTCAAAATCTGCAAGGTGAAATTTTGAAGCACAT
AGTTTATCTAAGTTCTTTTTAATCTCTTGATGTGGGCAAACATGTATAGTTTCTGTTAGAATAATCCGAGGTGCGTAGTT
GATCTATCGAGGGCCAAGCAATTATACGAGACATGACACCGAGATTTGTTAACAAGGTTCACCATCATGACTATATCCCC
AAGCTTAACTATAGACACTCCTCCTCACGACACCGCTACAACATCGCACCTCGCCCGTCCGGGCGCCGGCACATGCCACC
GGCTCCCCCCTACGTGTCTTGCTATTATTTTGGCACATGTATATAAGATGCCTAGAATACAAATTGCTTGTTAGGAT---
ATGAGTCCATATTCTATCTACATACCATACGACTCAGAGTCCAATTGTAATATATCTTTATACACAATATACGACACAAA
TCTAACAACTTTTGCATCAACATGACATTATAACAATTCTTATGGACCTTGTTGATCAATGAAGCAACGCCGTT-CCCTA
ATAGATGAAAAAGACAAGTTAACATAGAGGTCTCGCGTCGCACTACGCGTGGGAAATGGAGCACCCGGACATGAACGACT
TGCAAGTGCCAAGCAGGCCTGCTCAGCTACGTGCCAAGTTCTCTGAGCAAGTGTACTGCTATAACCTCCGTCCAAAATTA
CGTGTCTTAAAATTTATCTAACACTAAAATATGTCTAGATATTATCCATATATAGACAAATCAAAAAGAAATAATTCAGG
ACGGAGGGAGTATTATACAAGCAAAGCCACTACGGTGATCCGT--TTTTTTTGGCTAAAAAAAAGAAGGAGAAGGC-AAA
GCCACTATGGGCAGTGAAGCCAGTAGGCCCAGTTTAACTGTGTGGTTGGGCCACTGTTTGCCCCCGCCCCCCTGCAAAGC
CACTGTGCAAGCCCAACTAAGAGGCCTATTTATATCGA--------CCCCCACCTCCTCCCTCAGCATCCACACCGATCT
AGGGTTTCCTGCTAGGGTTTTGGTCCTTCGTTTT---CGGCGGCGCAAGATGGGGGAGAGGGTCAAGGGAACCGTGAAGT
GGTTCAACGTCACCAAGGGGTTCGGCTTCATCTCCCCGGACGACGGCGGCGAGGACCTTTTCGTCCACCAGTCCGCCATC
AAGTCCGACGGCTACCGCAGCCTCAACGAGAACGACGCCGTCGAGTTCGAGATAATCACCGGCGACGACGGACGCACCAA
GGCCTCCGACGTCACCGCACCAGGAGGAGGGGCGCTCTCCGGCGGCTCCCGCCCTGGCGAAGGCGGTGGTGACCGCGGGG
GCCGCGGCGGCTATGGAGGCGGCGGCGGTGGCTACGGCGGT------GGCGGTGGTGGCTACGGAGG---CGGTGGTGGC
GGCTACGGCGGCGGTGGTGGCGGCTACGGTGGCGGTGGCTATGGAGGCGGCGGTGGCGGCGGCCGTGGGTGCTACAAGTG
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GCGAAGATGGCCACA
TCTCCAGGGACTGCCCCCAGGGCGGCGGTGGCGGCGGCGGCTACGGCGGTGGTG------------GCTAC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGAGGTGGTGGCGGCGGCGGCCGTGAGTGC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCC
AGGGACTGCCCCCAGGGCGGC------GGCGGCGG---C---GGCTACGGAGGCGGTGGCGGCCGTGGCGGTGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCCCGCGAGTGCCCCAACAAGGCCCACTAGGCGGCACAGC
TCTTCAGATCTGAGTGCCCCGTTTACCCTTGCTCCTTTACCTACCTCCTGATTCTGCAGCAAGTCATACCCTATACCTAT
CAGTACTAGTATTAGTCGCCGTAGCGTTTCCCCCTGCTGCT-----------------CGATGCGAGCTTGGTTCCAGAA
GAATTGCTGGTGGTGTGTTCGT---TAAGATCCAAGTTATTTTGCTGTCTC-TCTGTGATGAGGACACAGATCTATCTAT
GTGTTGG-------ATGGACTAAGTTATCGAAGTC-AAGTT-TGGTGTCTTGAGATTGATCTATGATCTTGCATGTCTAT
TGTTTATCTTACATATCTGCCATGCTTGAAAGTGTTGATTCTGATATTCTATTCTAGGTTA---GTGGTGGATTATTTTG
GAATCCTGTTCTCCCATTTCTATGCGATTCCATTGGCGTTTTGATAGCGGTAT-GATTCGCAAGTTTGATGCTTCACGTT
CAACAGGTTCATGGTTCTAAATATTCAAC-----AGGTCCATTCTTATATGTACCTGTGCCACTGTGCTGT-T-------
--------------TAGTAGATTCTTCTCATGCCACTTGCTTGCAAAATGTAACCTAGCTTAATCTTTTTGCATCCGTGC
TAAGCAAGC------------------------------------------TCTGCTGTCAAGCCCTCCCATTATGCCCG
CATTTCATTATAAGCTTAATCTGAATTCAGCAGTCT----CTTAAGAAAGAAGGCACGGTAGCTTACTGATTAAGCCTAA
AGCTCCGTTGCAGCTTAGTGGAGT-AGTGTGCTTTGTCTTGGATGAACGGAATAGAATCATGTCGCTTCAGACTTA-GGG
ATGCGAAGAATAAAAGCCTAAATTTTGATCTCCTTCCAACATATGACTCTAGAACATATGATTGAATAAATCTT------
----------------------------------TGTGAGCTTACGACGACTTATCATCTGCGGCTTTTTAGCATTTTTC
ATAGGAAATTTAAT
>chr1A_3
--GTCATGGTGCTATTATCATGGAAGTTCAGGCTCGATCAGAGGAGTTCGAAATCTACAAGGTGAAATTCTGAAGCAGAT
AGTTTATCTAAGTTCCTTTTAATCTCTGGATGTGGGCAAACATGTATGGTTTTTGTTAGAATAATTTAAGGCGCGTAGTT
GATCTACCAAGGACCAAGCAATCATACGAGACACGACACCTAGATTTGTTAATGAGGTTCACCGTCATGGCTACATCCCC
GGGTTTGACTATGGACGCTCCCTCTCACGACACCGCTACCATGTCGCACCTCGCCCGTCCGGGTGTCGGCACACGCCGCT
GCCGCATATGTCTAACCCCT---------------CATATATATAAGAGGCCTAGAATACAAGTGTCTTGTTAGGAC---
ATGACTCCATATTCTATCTACAAACCATACAACTCGGAGTTCAATTGTAATCTATTTTTGTACACAATATTCGACACAAC
CCTAACAACTTTCGCATCAACATGACATTGTAACAATTCTTATGGACCTCGTTGATCAATAAAGCAACATCGTTCCCCTA
ATAGATGAAAAAGACAAGTTAACATAGAGGCCTCGCGTGGCGCTACGCGTGGGAAATGGAGCACCGGGACATGAACAACT
TGCAAGTGCCAAGCAGGCCTGTTAAGCTACGTGCCAAGTTCTCTCAGCAAGTGTACTGTTATTACCTCTGTTCCAAATTA
CGTGTCTTAAAAATTATCTAACATTAAAATATGTCTAGATATTATCCTTATATAGACAAATCAAAAACAAATAATTCAGG
ACGGAGGAAGTATTATACAAGCAAAGC--------TGATCTTT--TTTTTTTTGCTAAAAAAAAGAAGGAGAAGGCAAAA
GCCACTATGGGCAGTGAAGCCATTAGGCCCAGTTTAACTGTGTGGTTGGGCCACTGTTTGCCCCG--CCCCCCGCAAAGC
CGCTGTATAAGCCCACCTAAGAGGCCTATTTATATCGA--------CCCCCACCTCCTCCTTCAGCCTCCACACCGATCT
AGGGTTTCCTGCTAGGGTTTTGGTCCTTCGGTTT---CGGCGGCGCAAGATGGGGGAGAGGGTCAAGGGAACCGTGAAGT
GGTTCAACGTCACCAAGGGGTTCGGCTTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATC
AAGTCCGACGGCTACCGCAGCCTCAACGAGAACGACACCGTCGAGTTCGAGGTCATCACCGGCGACGACGGTCGCACCAA
GGCCTCCGACGTCACCGCACCAGGAGGAGGAGCGCTCTCCGGCGGCTCCCGCCCTGGCGATGGCGGTGGTGACCGTGGGG
GCCGCGGCGGCTACGGT------GGCGGTGGCTACGGCGGTGGCGGTGGCGGTGGCGGCTACGGAGG---CGGTGGTGGC
GGTTACGGCGGTGGCGGTGGCGGCTACGGTGGTGGC------------------GGCGGCGGCCGTGGATGCTACAAGTG
CGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCGAGGAGGGCCACA
TCTCCAGGGACTGCCCCCAGGGCGGCGGCGGTGGCGGCGGATACGGCGGTGGTG------------GCTAT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGAGGAGGCGGCGGCGGCGGCCGCGAGTGC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCC
AGGGACTGCCCCCAGGGCGGTGGTGGTGGCGGCGGCGGCGGCGGCTACGGAGGCGGTGGTGGCCGTGGCGGCGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCCCGCGAGTGCCCCAACAAGGCCCACTAGGCGGCACAGC
TCTTCAGATCTGAGTGCCCCGTTTACCCTCGCTCCTTTACCTACCTCCTGATTCTGCAGCAAGTCATACCCTATACCTAT
CAGTACTAGTATTAGTCGCCGTAGCGTTTCCCCCTGCTGCT-----------------CGATCCGAGCTTGGTTCCAGAA
GAATTGCTGGTGGTGTGTTCGTCGTTAAGATCCAAGTTATTTTGTTGTCTC-TCTGTGATGAGGACACAGATCTATCTAT
GTGTTGG-------ATGGACTAAGTTATCGAAGTC-AAGTT-TGGTTTCTTGAGATTGATCTATGATCTTGCATGCCTAG
TGTTTATCTTGCATGTCTGCCAGGCTTGAAAGCGTTGATTCTGATATTCTGTTCTAGGCTAGTGGTGGTGGATTATTTTG
GAATCCTGTTCTCCCATTTATGTGCGATTCCATTGGCGTTTTGATAGTGGTAT-GATTCGCAAGTTTGATGCTTCATGTT
CAACAGGTTCATGGTTCCAAATCTTCAAC-----AGGTCAATTCTTATATGTTCTTGTGCCACTGTCTGCTGT-------
--------------TAGTAGATTCTTCACATGCCACTAGCTTGCAAAATGCATCCTAG----ATCTTTTTGCATCCGTCC
TAAGCAAGACACGTTGATTCCTTGCTATGATAGAAGACAAATTCAATCAGCTCTGCTGTTCCCATTAC-------GCCCA
CATTTCATTATAAGCTTAATCTGAATTCAGCAGTCTCTTGCTTAAGAAAGAAGGCACCTTAGCTTACTGATTAAGCCTGA
AGCTCCGTTGCAGCTTAGTGGAGT-AGTGTGCTTTGTCTGGGATGAACAGAATGGAATCATGTCGCTTTAGACTTGGGGG
ATGCGAAGAATAACAGCCTAAATTTTTATCTCCTTCCAACAAATGACTCTAGAGCACATGAACTATGATT----------
--------------------------------------------------------------------------------
--------------
>chr1B_879
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------AAGC
TGCTGTACAAGCCCAACTAAACAGACTATTTATCCAGACCCCCCACCTCCTCCCTCAGTCCTCAGCCACCACACCGATCT
AGGGTTTCCTGCTAGGGTTTTAGTCCTTCGTTTCCGGCGGCGGCGCAAGATGGGTGAGAGACTGAAGGGTACCGTGAAGT
GGTTCAACGTGACCAAGGGGTTCGGCTTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATC
AAGGCCGACGGCTACCGCAGCCTCAACGAGAACGACGTCGTCGAGTTCGAGGTCATCACCGGCGACGACGGGCGCACCAA
GGCCACCGACGTCACCGCACCAGGAGGAGGTGCGCTCGCCGGCGGCTCCCGCCCTAGCGAAGGCGGTGGTGACCGCGGGG
GTCGCGGCGGC---------------------------GGTGGCTACGGTGGAGGCGGCTATGGCGG---TGGCGGCGGC
GGCTACGGAGGTGGCGGCGGTGGCTACGGAGGTGGC------------------GGCGGCAGCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CGGCGGCGGTGGCGGCTACGGAGGTGGTGGTGGCGGCGGCCGCTAC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGAGGAGGCAGCGGTGGCGGCCGTGAGTGC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCC
AGGGACTGCCCCCAGGGCGGC------GGTGGCGGTGGTGGTGGCTACGGAGGCGGTGGCGGCCGTGGCGGTGGTGGTGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCGCGCGAGTGCCCCAACAAGACCAACTAGGCGGCGCTGC
CCGTCAGATCTGAGTTCCCCGTTCCCCTTCGCTCCTTTTCCTACCGCCTGACTCTGCAGCAAGTCATACC-TATACCTAT
CAGTATTAGTATATGTCGCCGTAGTGTTCCC-GTGCTTCTCGTAGGAAGAAGAATCGACGATGCGAGCTTGGTTCCAGAA
GTATTGTTGGTGGATTA-TTGTTC----GTTCGAAGTTATCTTGTCGTGTCGTCTGATGTGGACAGACTGATCTATCTCT
ATGTATTGGATGGACCG----AAGTTATGCAAGTCTAAGTTATGCTGTCTGATTATTGATCTCGATGAAA----------
-------CTTGCATATCATT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr1A_927
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CCTCATTCCTCAGCCACCACACCGATCT
AGGGTTTCCTGCTAGGGTTTTAGTCCTTCGTTTCCAGCGGCGGCGCAAGATGGGTGAGAGAGTGAAGGGAACCGTGAAGT
GGTTCAACGTCACCAAGGGGTTCGGATTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATC
AAGGCCGACGGCTACCGCAGCCTCAACGAGAACGACGTCGTCGAGTTTGAGGTCATCACCGGCGACGACGGCCGAACCAA
GGCCGCCGACGTCACCGCACCAGGAGGGGGTGCGCTCGCCGGCGGCTCCCGCCCTGGCGACGGCGGTGGTGACCGCGGGG
GTCGCGGCGGG---------------------------GGTGGCTACGGTGGAGGCGGCTACGGCGGCGGCGGCGGCGGC
GGCTACGGTGGTGGTGGCGGCGGCTACGGCAGCGGT------------------GGCGGCAGCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CGGCGGCGGTGGCGGCTATGGAGGTGGTGGCGGCGGCGGCCGCTAC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGAGGAGGCGGCGGCGGCGGCCGTGAGTGC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCC
AGGGACTGCCCCCAGGGCGGC------GGCGGCGGTGGCGGTGGCTACGGAGGTGGTGGCGGCCGTGGCGGTGGTGGTGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCGCGCGAGTGCCCCAACAAGACCAACTAGACGGCTTTGC
CCGTCAGATCTGAGTGCCCCGTTCCCCTTCGCTCCTTTTCCTACCGCCTGACTCTGCAGCAAGTCATACC-TATACCTAT
CAGTATTAGTATATGTCGCCGTAGTGTTCCCCGTGCTTCTCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr1D_943
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CCACACCGATCT
AGGGTTTCCTGCTAGGGTTTTAGTCCTTCGTTTCCGGCGGCGGCGCAAGATGGGTGAGAGAGTGAAGGGAACCGTGAAGT
GGTTCAACGTCACCAAGGGGTTCGGCTTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATC
AAGGCCGACGGCTACCGCAGCCTCAACGAGAACGACGTCGTCGAGTTCGAGGTCATCACCGGCGACGACGGCCGCACCAA
GGCCGCCGACGTCACCGCACCAGGAGGAGGTGCGCTCGCCGGCGGCTCCCGCCCTGGCGACGGCGGTGGTGACCGCGGGG
GTCGCGGCGGG---------------------------GGTGGCTACGGTGGAGGCGGCTACGGCGG---CGGTGGCGGC
GGCTACGGCGGCGGTGGCGGCGGCTATGGCGGCGGT------------------GGCGGCAGCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGGCGGCGGTGGCGGCTACGGAGGTGGTGGTGGCGGCGGCCGCTAC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGCGGCGGCGGCGGCGGCGGCCGTGAGTGCTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAAGTGCGGCGAGGAGGGCCACATCTCC
AGGGACTGCCCCCAGGGCGGT------GGTGGCGGCGGCGGTGGCTACGGAGGTGGTGGCGGCCGTGGCGGTGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCTGGCCACTTCTCGCGCGAGTGCCCCAACAAGACCAACTAGGCGGCGCTGC
CCGTCAGATCTGAGTGCCCCGTTCCCCTTCGCTCCTTTTCCTACCGCCTGACTCTGCAGCAAGTCATACC-TATACCTAT
CAGTATTAGTATAAGTCGCCGTAGTGTTCCCCGTGCTTCTCGTAGGAAGAAGAATCGACGATGCGAGCCTGGTTCGAGAA
GTATTGTTGGTGGCGTGTTTGTTC----GTTCGAAGTTATCTTGTTGTGTCGTCTGATGGGGACAGACTGATCTATCTTT
ATGTATTGGATGAAATGGACTAAGTTATGCAAGTC-AAGTTATGCTATCTGGTTATTGATCTCGATGAAA----------
-------CTTGCATGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>SNPs
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
---S-------------S-----------------------------------------------------------S-S
--------------S-------------S-S-------------------------S-----------S---------S-
-----------------------------------------------------------------------------SSS
-------S-----S--------------------------------------S--------------S--S--------S
-----------------------------------S------------------------------------S-------
------S-----------------------------------------S---S---------------------------
------------------------------------------S-----------------------SS--------S---
---------------------S-------------------------S---S---S------S-----------------
-----S-------------S------------S----------SS-----------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------S-----
-----------------------------------------S--------------------------------------
-----S---------------S----------------------------------S-----------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------S--------------------S--------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------S---S-------------------------SSSS--------------------------
------S----------S-------SSSSSSSSS------------------S-------------SSS-SSSSSSSSSS
SSSSSSSSSSSSSS--S---S--------S----------------------------------S--------------S
---------SS--S-----------S-----S----S-------------S-----------S-----------------
--------------------------------------------------------------------------------
S----------------------SS---------------------------------------------------S-S-
-------------------------S---------SS-SSS-SSSSSSS------S--S-----------S-SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-----S-S------------------------
----------S---
>forward_271
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TAGGCACTCCTCCTCACCAT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------
>reverse_1195
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TCCATC
AAGTCCGACGGCTA------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>forward_683
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCAGCTACGTGCCAAGTTCTT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>reverse_3413
--------------------------------------------------------------------------------
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----------------------------------------------------GCTTGTGCCACTGTAGACCT--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
