>input_sequence_63542
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-------------------------------------------------------------------------ATGGCCG
TCGTTTGTGCCCAAGCCGTCGACTCTTGGCCCATCTGGAACCTTCAAGGCTACGGGGTCGAGGAGACGCCTATCTGGGAC
CACGTGGACTGCGAGGAGACGCCCATCTGGGACCTCGACGACTGCGTGGAGACGGCCGAGCTCGGCTCCGGGACCTTCGG
CACAGTCACCAAGGCGTGGTCCTACAAGACCGGCGAGAGCGTCGCCATCAAGACCCTCAGCTCGAGCAGCCATGACGCGG
TCTGGCGGGAGGCCGACCTCCTCAGGGCGTGCCATGGCCACCTCAACATCGTCCAGCTGCGGGCCATGTCCTTCGACCGC
AGCGCCGACAGGCTCTCCCTCGTGATGGAGTACGTCGGGCCAAGCCTCCACGACGTCCTCCACCGCGCCCGCCGCGGCTG
CCCGTTCCAGGAGGATGTGGTGCGCTACCTCATGCGGCAGCTTCTGAGCGGCGCCGACCACATGCACCGGCTGTGCCACG
TCGTCCACCGGGACATCAAGCCCGAGAACGTCCTCATCGGCGACGGCGTCAAGATATGCGACTTCGGGCTCGCCATGCAC
ATGTCCCAGTCCCCGCCGTACGGCCACCATGGCACGCGCAGCTACATGGCGCCGGAGATCCTCCTGGGGAAGCCCGACTA
CGACGCCACCGTGGACGCCTGGTCGCTGGGCTGCGTCATGGCCGAGCTCCTCCTAGGCGAGAGGCTCTTTGGCCGCGCGG
CGGACGACGCCGACCAGCTCCTCAGGATCTTCTACATACTTGGCGTGCCGGACCAGATCTCCTGGCCGTCCTACAACTCC
ATGCCGCTCGCCGGCGAGCTGGTGGCGCCGCCGAGCATCCCCCACCGCAACAGGCTGCGCGAGGTGTTTCCAGAGGACTG
CCTGTCCAGACAAGGCTTCCAAGTATTGAGCGGCCTCCTCTCCTGCGACGCAGGCAAGAGGCTGTCGGCGGCTGACGCCC
TCGAGCTTCCATGGTTCACCTCCAACTAG---------------------------------------------------
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>chr3B_1_TraesCS3B01G271700
TCGCCCAAAACTGTAAAACACAAAAAATTTGCAGGTTTGACCACTTATGTGGGGTCTGCTAGAGATGCTCTAACACCGCC
TTCCAGTATGAGAGTAATAACCATCCCAGCAGCCACCTCCTTCAATAAAGAAAGTTAGGGTTCGTGTCTCTCGTCGGCGC
CGGCGCAGGTCTGCCTCGTCTCCGGTGGCCCTAGGGCCATGGAGGCGCGGTGGATCCTGGCAATGGCCGGTGGAAGGGCT
CCGTTTTTA---G--TCTTTTTTCAATCTTGTTAGGGTTTGTGTTCTGCCCAAAAAGACGAGACGGCGGCGACTCCCTTA
AGATGGAATAATGGTCTGCCCGACCGCCTAGCCTCCCGTTCGACGGTATGTCTAGCATCGTTGGTGGGCGTGTGGAGGTG
TGTCTCCGGCGGATCTATTTTTGGTGGATTTGTTCAGA----GT------TCGTCTACA--TTCGTGTGTCTTCGGTTTG
GATCCTTCCGATCTACGTTATTCTTCATCG---ACGGTTGCTGTTCTGGGGTGCTGGTCCTATAGGGCCTTATCGCGACA
ACTTTCCGACTGTCTACTATAACAAGTTGTGCCCGACTCCGGCGATGGAGGAGCGATGACGG-CGGCGTGCCTTCGGCTC
GCTTCAGTGCTTGTAGTCGTTGTTATGTGGTCTACA------GATCTATTTTTTATTTTTGATATTTGTTGTATTGCTAT
GATCGAAAATGAATAGACCAGAATTTTTTTTTAAAAAAAACACCGCCTTCCAGTGCCGAAGCAACCGACACGCGCTATTA
CGTGTTCTTTCCTTAGACCGGGATGAGGAATCCGAGTGCCAACCTTGTACCCCGCCAGTCCGATAACAACTCCAA-CTTG
CCTCTTCAATACG--AGTAGTATACATGGGAAGTGCATGCGATGCGACCTTCTCCCCTCTCACGCCTCCCCAAGATCGAT
CGATCGATATACAGTTCCCTCCTCGGCTCGATCAACTCGTTCTCTGTCCA---TCTTCTCCCCTCCGTTCTCGATGGCCG
TCGTTTGTGCCCAAGCCGTCGACTCTTGGCCCATCTGGAACCTTCAAGGCTACGGGGTCGAGGAGACGCCTATCTGGGAC
CACGTGGACTGCGAGGAGACGCCCATCTGGGACCTCGACGACTGCGTGGAGACGGCCGAGCTCGGCTCCGGGACCTTCGG
CACAGTCACCAAGGCGTGGTCCTACAAGACCGGCGAGAGCGTCGCCATCAAGACCCTCAGCTCGAGCAGCCATGACGCGG
TCTGGCGGGAGGCCGACCTCCTCAGGGCGTGCCATGGCCACCTCAACATCGTCCAGCTGCGGGCCATGTCCTTCGACCGC
AGCGCCGACAGGCTCTCCCTCGTGATGGAGTACGTCGGGCCAAGCCTCCACGACGTCCTCCACCGCGCCCGCCGCGGCTG
CCCGTTCCAGGAGGATGTGGTGCGCTACCTCATGCGGCAGCTTCTGAGCGGCGCCGACCACATGCACCGGCTGTGCCACG
TCGTCCACCGGGACATCAAGCCCGAGAACGTCCTCATCGGCGACGGCGTCAAGATATGCGACTTCGGGCTCGCCATGCAC
ATGTCCCAGTCCCCGCCGTACGGCCACCATGGCACGCGCAGCTACATGGCGCCGGAGATCCTCCTGGGGAAGCCCGACTA
CGACGCCACCGTGGACGCCTGGTCGCTGGGCTGCGTCATGGCCGAGCTCCTCCTAGGCGAGAGGCTCTTTGGCCGCGCGG
CGGACGACGCCGACCAGCTCCTCAGGATCTTCTACATACTTGGCGTGCCGGACCAGATCTCCTGGCCGTCCTACAACTCC
ATGCCGCTCGCCGGCGAGCTGGTGGCGCCGCCGAGCATCCCCCACCGCAACAGGCTGCGCGAGGTGTTTCCAGAGGACTG
CCTGTCCAGACAAGGCTTCCAAGTATTGAGCGGCCTCCTCTCCTGCGACGCAGGCAAGAGGCTGTCGGCGGCTGACGCCC
TCGAGCTTCCATGGTTCACCTCCAACTAGATAGGGCGACGCTCCGGAAACTCTGATATGATAGCGTGCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATATCTGGGCCGGACCGCCCGAGTATACAAGATAGCATTACATATATAATTTT--TTTTTTACAAG
CAGGGAAGGAGGCAAGAGGGGCGGAGGGTGCAACACTAGGCGGCTAGGCACCGAATCCACACATCGGCAGCGTCCTTGAG
GGTAGTAGGGAGGCGGATGCG-----GCACGGCATCCTCTCTGCAAAGCTGCAGTAGC-CGGGGGAGTGAGGGTGGCATG
TTCTGGAAGACCACCGCGTTGCGGTGTTTCCAAAGTTGCCAGCAGCAAAGGAGCAGGAAAGCTGGCCCCGTCCGAGGAGG
GACCAATCCCGGAGGAGACATAAGGTGCAGCAGCTTGACTGTGGAGACTGTCGGGGTCGCCCCGACAGAGGCCCGGAACT
GCTGGGCAAAGGGGCAAGTGAAGATGAGGTGGTCGGCCGTCTTAAGCGGAGCCGAGCAGATGGGGCAGCCAGCCTCGGCC
ACCTCAACAATGTGCTTACGCAGAAGCACGTCTCTCGTATGAATCCGAGCCTGCACCAGGAGCCAGGCAAAGAAACGAAC
CCTGCTTGGAGCGTAGCTCGTCCAGATGAAGTTGGCGAAA-GGCGCTCCCACACCACCAAAGTGGCATAGCTGGTAAACC
CCGACAGAGGAGAGGTCGGTCCCTTTGGCACAGCCCGGGCGGAGAGCACGAGCGTCGGCCTCCTCGGACAGGACCAGC
>chr6D_113
--------------------------------------------------------------------------------
--------------------------------CCTCCTCCTCCAAGAAAGAAAGTTAGGGTTCGTGCCTCTCGCCGGCGC
CGTCGCAGGTCCGCCTCGTCTCCTGTGGCACTAGGGCCATGGAGGCACGGTGGATCCTGGCAATGGCCGGTGGGAGGGCT
CCATTTTTA---GTCGTTTTTTTCAATCTTGTTAGGGTTTGCATCCTACTCAGGAAGGCGAGACGACGGCGGCTCCCTAA
AGATGGAATAAAGGTCTC----CCCGCCTAGCCCCCGTTCCGGCGGTGCGTCTAGCATCGTTGGTGGGCGTGTGGAGGTG
TGTCTCCGGCATATCTATCTTCGGTGGATTTGCTCGGATCTCG----------TCTACG--TTCGTGTGTCTTCGGTTTG
AATCCTTCCAATCTACACTATTTTTCATCGGCGGCGGTTGCTGTTCTGGGGTGCTGGTCCTATGGGGCCTTAGCACGACG
ACTTCCCGACTGTCTACTACAATAAGTTGTGCCCGGCTCCGGCGATGGAGGGGCGATGAC-GGCGGCGCGCCTTCGGCTC
GCTTCGGTGCTTGTAGTCGTCGCTAGGTGGTCTACGGATCTGGATGTAATTTTTATTTCTGGTGTTCGTTGTACTGCCAT
GATTGAAGATGAGTAGATTAGAAGTTTTT---------------------------------------------------
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>chr6D_113
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--------------------------------CCTCCTCCTCCAAGAAAGAAAGTTAGGATTCGTGCCTCTCGCCGGCGC
CGGCGCAGGTCCGCCTCGTCTCCGGTGGCACTAGGGCCTTGGAGGTACGGTGGATCCTGGCAAGGGCCGGCGGGAGGGCT
CCGTTTTTA---GTCTTTTTTTTCAATCTTGTTAGGGTTTGCGTCCTACTCAGAAAGGCGAGACGACGGCGGCTTCCTGA
AGATGGAATAAAGGTCTC----CCCGCCTAGCCCCCGTTCCGGCGGTGTGTCTAGCATCGTTGGTGGGCGTGTGGAGGTA
TGTCTCCGGCATATCTATCTTCGGTGGATTTGCTCGGATCTCG----------TCTACG--TTCGTGTGTCTTCGGTTTG
AATCCTTCCAATCTACACTATTTTTCATCGGCGGCGGTTGCTGTTCTGGGGTGCTGGTCCTATGGGGCCTTAGCACGACG
ACTTCCCGACTGTCTACTACAACAAGTTGTGCCCGGCTCCGGCGATGGAGGGGCGATGAC-G-CGGCGTGCCTTCGGCTC
GCTTCGGTGCTTGTAGTCGTCGCTAGGTGGTCTACGGAGCTGGATGTAATTTTTATTTCTGGTGTTCGTTGTACTGCCAT
GATTGAAGATGAGTAGATTAGAAGTTTTT---------------------------------------------------
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>chr1D_113
--------------------------------------------------------------------------------
--------------------------------CCTCCTCCTCCAAGAAAGGAAGTTAGGGTTCGTGCCTCTCGCCGGCGT
CGGCGCAGGTCCGCCTCGTCTCCAGTGGTCCTAGGGCCATGGAGGCGCGGTGGATCCTGGCAAGGGCTGGCGGGAGGGCT
TCGTTTTTA---GTCGTTTTTTTCAATCTTGTTAGGGTTTATGTCCTATTCAGGAAGGCGAGACGGCGGCGGCTCCCTGA
AGATGGAATAAAGGTCTC----CCCACCTAGCCCCCGTTCCGGCGGTGCGTCTAGCATCGTTGGTGGGCGTGTGGAGGTG
TGTCTCCGGCAGATCTATCTTTGGTGGATTTGCTCGGATCTCGT-------CGTCTACG--TTCGTGTGTCTTCGGTTTG
GATCCTTCCGATCTACGTTATTTTTTATCGGTGGCGGTTGCTGTTCTGGGGTGCTGGTCCTATGGGGCCTTAGCACGACG
ACTTCCCGACTGTCTACTACAACAAGTTGTGCCCGGCTCCGGTGATGGAGGGGCGATGAC-GGCGGCGCGCCTTCGGCTC
GCTTCGGTGCTTGTAGTTGTCGCTAGGTAGTCTACAGATCTGGGTGTAATTTTTATTTCTGGTGTTCGTTGTACTGTCAT
GATTGAAGATGAATAGA---------------------------------------------------------------
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>chr2D_113
--------------------------------------------------------------------------------
--------------------------------CCTCCTCCTCCAAGAAAGAAAGTTAGGATTCGTGTTTCCCGCCGGCGC
CAGCACAGGTCTGCCTCATCTCCGGTGGCCCAAGGGCCATGGAGGCGCGGTGGATCCTGGCAAGGGCCGGCGGGAGGGCT
CCGTTTTTACTCG--TTTTTT--CAATCTTTCTAGGGTTTGTGTCCTGTTCAGGAAGGCGAGACGGCGGTGGCTCCCTGA
AGATGGAATAAAGGTCTC----CCCGTCTAGCCCCCGTTCCGATGGTGCGTCTAGCATCGTTGGTACGCGTGTGGAGGTG
TGTCTCCGGTAGATCTATCTTTGGTGTATTTACTCGGATCTCGT------TGTTGTTCG---TGGTGTGTCTTCGGTTTG
GATTCTTCCGATATATGTTATTTTTCATCGGCGGCGGTTGCTGTTCTGGGGTGCTGGTCCTATGGGGTCTTAGCACGACG
ACTTCCCGACTGTCTACTACAACAAGTTGTGCCCGACTCCGGCGATGGAGGGGCAATGAC-GGCGGCGCGCCTTCGGCTC
GCTTCAGTGCTTGTAGTCGTCGCTAGGTTGTCTACGGATCTGGATGTATTTTTT--TTCTGGTGTTCGTTGTACTGCCAT
GATTAAAGATGAATAGA---------------------------------------------------------------
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>chr7B_113
--------------------------------------------------------------------------------
--------------------------------CCTCCTCCTCCAAGAAAGAAAGCTAGGGTTTCTGCCTCTCGCCGGTGC
CGCCGCAGGTCCGCCTCGTCTCCGGTGGCCCTAGGGTCATGGGGACGCGGTGGATCCTGCCAAGGGCCGGCGGGAGGGCT
CCGTTTTCAGTCG--TTTTTTTCCTATTTTGTTAGGGTTTGTGTCATGCTCAGGAAGGCGAGACGGCGGCGGCTCCCTGA
AGATGGAATAAAGGTCTC----CCCGCCTAGCCCCCGTTCCGGCGGTGCATCTAGCATCGTTGGTGGGCGTGTGGAGGTG
TGTCTCCGGTGGATCTATCTTTAGTGGATTTGCTCGGATCTCGT------TCGTCTACG--TTCGTGTGTCTTCCGGTTG
AATCCTTCCAACCTACGTTATTCTTCATCGGCGGCGGTTGTTGTTCTGGTGCGCTGGTCCTATGGGGTCTTAGCACGAAG
ACTTCCCGACTGTCTACTACAACAAGTTGTGTCCGACTCCGGCGATGGAGGGGTGATGAC-GGCGGCGCGCCTTCGGCTC
GCTCAAGTGCTTGTAGTCGTCGCTAGGTGGTCTACGGATCTGGATGTAATTTTTATTTCTGGTGTCCGTTGTACTGCTAT
GATTGAAGATGAATAGATTGGAAGTTTTTCGGAAAAAAAA----------------------------------------
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>chr7B_113
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--------------------------------CCTCCTCCTCCAAGAAAGAAACTTAGGGTTCGTGCCTCTCGCCGGCGC
CGGCGCAGGTCCGCCTCGTCTCCGGTGGCCCTAGGGCCATGGAGGCGCGATGGATCCTGCCAAGGGCCGGCGGGAGGGCT
CCGTTTTTA---GTC-TTTTTTTCAATCTTGTTAGGGTTTGTGTCCTACTCAGGAAGGCGAGACGGCGGCGGCTCCCTGA
AGATGGAATAAATGTCTC----CCCGCCTAGCCCCCGTTCCGGCGGTGCGTCTAGCATTGTTGATGGGTGTGTGGAGGTT
TGTCTCCGGCAGATCTATCGTTGGTGGATTTCCTCGGATCTTGTCGTCGTTCATCTACG--TTCGTGTGTCTTCAGTTTG
AATCCTT-CGATCTACGTTATTTTTCATCGGCGGCGGTTGATGTTCTGAGGTGCTGGTCCTATGGGGCCTTAGCACGACG
ACTTCCCGACTGTCTACTACAACAAGTTGTGCCCGGCTCCGGCGATGGAGGAGCGATGAC-GGCGGCGCGCCTTCGGCTC
GCTTCGGTACTTGTAGTCGT------------------------------------------------------------
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>chr1B_116
--------------------------------------------------------------------------------
-----------------------------------CCTCCTCCAAGAAAGAAAGTTAGGGTTCGTGCCTCTCGCCGGCAC
CGGCGCATGTCCGCCTCGTCTCCGGTGGCCCTAGGGCCATGGAGACGCGGTGGATCCTGGCAAGGGCCGGCTGGAGGGCT
CCATTTTTA---GTTGTTTTTTTCAATCTTGTTAGGGTTTGTGTCCTACTCAGGAAGGCGAGACGGCGGCGGCTCCCTGA
AGATGGAATAAAGGTCTC----CCCGCCTAGCCCCTATACCGGCGGTGCGTCTAGCATCATTGGTGGGCATGTGAAGGTG
TGTCTCCGGCAGATCTATCTTTGGTGGATTTGCTCGGATCTCGTCGTTCTTCATCTACG--TTCGTGTGTCTTCGGTTTG
GATCCTTCCGATCTACGTTATTTTTCATCGGCGACGGTTGCTGTTCTGGGGTGCTGGTCCTATGGAGTCTTAGCACAACA
ACTTCCCGACTGTCTACTACAACAAGTTGTGCCCGGCTCCGGCGATGGAGGGGCAATGAC-GGCGGCGCGCCTTCGACTC
GCTTCGGTGCTTGTAGTCGTCGCTAGGTGGTTTACGAATCTGAATGTAATTTTTATTTTTGATATTCGTTGTACTGTCAT
GATTGAAGATGAATAGATTAGAAGTTTTT---------------------------------------------------
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>chr1B_116
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-----------------------------------CCTCCTCTAAGAAAGAAAGTTAGGGTTCGTGCCTCTCGCTGGCGC
CGGCGCAGATCCGCCTCGTCTCCGGTGGACCTAGGGCCATGGAGGAGCGGTGGATCCTGGCAAGGGCCGGCGGGAGGGCT
CCGCTTTTA---ATCGTTTTTTTCAATCTTGTTAGGGTTTGTGTCCTACTCAGGAAGACGAGACGGCGGCGGCTCCCTGA
AGATGGAATAAAGGTATC----ACTGCCTAGCCCCCATTCCGAAGGTGCGCCTAGCATCGTTGGTGGGCGTGTGGAGGTG
TGTCTCCTACAGATCTATCTTTGGTTGATTTGCTCGTATCTCATCGTT----------G--TTCGTCTGTCTTCGGTTTG
GATCCTTCCGATCTAAGTTATTTTTCATCGGCGATGGTTGCTGTTCTGGGGTGCTGGTCCTATGGGGCCTTAGCACGACG
ACTTCCCGACTATCTACTACAACAAGTTGTACCCGGCTCCGGCGATGGAGGGGCGATGAC-GGCGGCGCGCCTTCGGCTC
GCTTCGGTGCTTGTAGTCGTCGCTACGTGGTCTACGAATCTGGATGTAATTTTTATTTCTTGTATTCGTTGTAGTGCCAT
GATTGAAGATGAATAGATTGGAAGTTTTTCCTCAAAAAAA----------------------------------------
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>chr1A_116
--------------------------------------------------------------------------------
-----------------------------------CCTCCTCCAAAAAAGGAAGTTAGGGTTCATGCCTCTCGCCGGCGC
CGGCACAGGTCCGCCTCGTTTCCGGTGGTCCTAGGGCCATGGAGGCGTGGTAGATCCTGCCAAGGGCCGGCGGGAGGGCT
CCATTTTTA---GTT-TTTTTTTCAATCTTGTTAGGATTTGTGTCATACTTAGGAAGGCGAGACGGTGGCGGCTCCCTGA
AGATGGAATAAAGGTCTC----CTCGCCTAGCCCCCGTTTCGGAGGTGCGTCTAGCATCGTTGGTGGGCGTGTGGAGGTG
TGTCTCCGGCAGATATGTCTTTGGTGGATTTGCTCT-----CGTCGTTGTTCGTTATACGTTTCGAGTGTCTTCGGTTTG
GATCCTTCCGATCTACGTTATTTTTCATTAGCGACGGTTGCTGTTCTGGGGTGTTGGTCCTATGAGGCCTTAGCACGATG
ACTCCCCGACTGTCTACTACAACAAGTTGTGCCCGGCTCCGGTGATGGAGGGGCGATGAC-GACAGCGCGCCTTCGGCTC
GCTTCGGTGCTTGTAGTCATCGTTTGGTGGTCTACGGATATGGATGTAATTTTTATTTCTGAGGTTCGTTATACTGTCAT
GATTAAAAATGAATAGA---------------------------------------------------------------
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>chr3D_732
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--------------------------------------AACACCGCCTTCCAATGCCGAAGGAACCGACACGCGCGATTA
CGCGTTCTTTCCTTCTACC-GGACGAGGAATCCGAGTGCCAGCCTTGTACCCCGCCAGTCCGATAACGACTCCAAACTTG
CCTCTTCAATACTACAGTAGTATACATGGGAAGTGCATGGGAGGC---CTTCTCCCCTCTCACGCCTCCCCAAGA----T
CGATCGATATACAGTTCCCTCCTCGGCTCGATCAGCTCGTTCTCCGTCCATCTTCTTCTCCCCTCCGTTCTCGATGGCCA
TCGTTTGTGCCCAAGCCGTCGACTCTTGGCCCATCTGGAACCTCCAAGGCTGCGGGGTCGAGGAGATGCCCACCTGGGAC
CACGAGGACTGCGAGGAGACGCCCATCTGGGAACTCGACGACTGCGTGGAGACGGCCGAGCTCGGCTCCGGGAGCTTCGG
CACAGTCACCAAGGCGTGGTCCTACAAGACCGGCGAGAGCGTCGCCATCAAGACCCTCAGCTCGAGCAGCCATGAGGCGG
TCCGGCGGGAGGCCGGCCTCCTCAGGGCGTGCCATGGCCACCTCAACATCGTCCAGCTGCGGGCCATGTCCTTCGACCGC
AACGCCGACAGGCTCTCCCTCGTGATGGAGTACGTCGGGCCGAGCCTCCACGACGTCCTCCACCGCGCCCGCCGCGGCTG
CCCGTTCCAGGAGGACGTCGTGCGCTTCCTCATGCGGCAGCTTCTGAGCGGCGCCGACCACATGCACCGGCTGTGCCACG
TCGTCCACCGGGACATCAAGCCCGAGAACGTCCTCGTCGGCGACGGCGTCAAGATATGCGACTTCGGCCTCGCCATGTCC
ATGTCCCAGGCCCCGCCGTACGGCCACCATGGCACGCGCAGCTACATGGCGCCGGAGATCCTCCTGGGGAAGCCCGACTA
CGACGCCACCGTGGACGCCTGGTCGCTGGGCTGCGTCATGGCCGAGCTCCTCCTAGGCGAGCGGCTCTTTGGCCGCGCGG
CGGACGACGCCGACCAGCTCCTCAGGATCTTCTACATACTTGGCGTGCCGGACCAGGTCTCCTGGCCGTCCTACAACTCC
TTGCCGCTCGCCGGCGAGCTGGTGGCGCCGCCGAGCATCCCCCACCGCAACAGGCTGCGCGAGGTGTTTCCAGAGGACTG
CCTGTCCAGACAAGGCTTCCAAGTATTGAGCGGCCTCCTCTCCTGCGACGCACGCAAGAGGCTGTATGCGGGTGAAGCCC
TCGAGCTTCCATGGTTCACCACCAACTAGATAGGACCACGCTCCGGAAACTTTGATTTGATAGCGTGC------------
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>chr3A_732
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--------------------------------------AACACCGCCTTCCGATGCCGAAGGAACCGACACGCGCTATTA
CGTGTTCTTTCCTTCGACCGGGACGAGGAATCCGAGCGCCAGCCTTGTACCCCGCCAGTCCGATAACGACTCCAAACTTG
CCTCTTCAC--------TAGTAGACATGGCAAGTGCATGGGACGCGACCTT--------------CTCCCCAAGATCGAT
CGATCGATATACAGTTCCCTCCTCGGCTCGATCAGCTCGTTCTCCGTCCATCTTCTTCTCCCCTCCGTTCTCGATGGCCG
TCGTTTGTGCCCAAGCCGTCGACTCTTGGCCCATCTGGAACCTCCAAGGCTACGGGGTCGA-------------------
-----GGACTGCGAGGAGACGCCCATCTGGGAACTCGACGACTGCGAGGAGACGGCCGAGCTCGGCTCCGGGAGCTTCGG
CACAGTCACCAAGGCGTGGTCCTACAAGACCGGCGAGAGCGTCGCCATCAAGACCCTCGGCTCGAGCAGCCATGACGCGG
TCCGGCGGGAGGCCGACCTCCTCAGGGCGTGCCATGGCCACCTCAACATCGTCCAGCTGCGGGACATGTCCTTCGACCGC
AACGCCGACAGGCTCTCCCTCGTCATGGAGTACGTCGGGCCGAGCCTCCACGACGTCCTCCACCGCGCCCGCCGCGGCTG
CCCGTTCCAGGAGGACGTCGTGCGCTTCCTCATGCGGCAGCTTCTGAGCGGCGCCGACCACATGCACCGGCTGTGCCACG
TCGTCCACCGGGACATCAAGCCCGAGAACGTCCTCGTCGGCGACGGCGTCAAGATATGCGACTTCGGGCTCGCCATGTCC
ATGTCCCAGGCCCCGCCGTACGGCCACCGTGGCACCCGCAGCTACATGGCGCCGGAGATCCTCCTGGGGAAGCCCGACTA
CGACGCCACCGTGGACGCCTGGTCGCTGGGCTGCGTCATGGCCGAGCTCCTCCTAGGCGAGCGGCTCTTTGGCCGCGCGG
CGGACGACGCCGACCAGCTCCTCAGGATCTTCTACGTACTAGGCGTGCCGGACCAGATCTCCTGGCCGTCCTACAACTCC
ATGCCGCTGGCCGGCGAGCTGGTGGCGCCGCCGAGCATCCCCCACCGCAACAGGCTGCGCGAGGTGTTTCCAGAGGACTG
CCTGTCCAGACAAGGTTTCCAAGTATTGAGCGGCCTCCTCTCCTGCGACGCAGGCAAGAGGCTGTCGGCGGCTGACGCCC
TCGAGCTTCCATGGTTCACCACCAACTAGACAGGACGACGCTCCGGAAACTCTGATTTGATAGCGTGC------------
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>chrUn_2302
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--------------ATATCTGGGCCGGACCGCCCGAGTATACAAGATAGCATTACATATTTTTTTATTCTTTTTTACAAG
CAGGGAAGGAGGCAAGAGGGGCGGAGGGTGCAACACTAGGCGGCTAGGCACCGAATCCACACATCGGCAGCGTCCTTGAG
GGTAGTAGGGAGGCGGACGCGCCACAGCACGGCATCCTCTCTGCAAAGCTGCAGTAGC-CGGGGGAGTGAGGGTGGCATG
TTCTCGAAGACCACCGCGTTGCGGTGTTTCCAAAGTTGCCAGCAACAAAGGAGCAGGAAAGCTAGCCCCGTCCGAGGAGG
GACCAATCCCGGAGGAGACATAAGGTGCAGCAGCTTGACTGTGGAGACTGTCGGGGTCGCCCCGACAGAGGCCCAGAACT
GCTGGGCAAAGGGGCAAGTGAAGATGAGGTGGTCGGCCGTCTCAAGCGGAGCAGAGCAGATGGGGCAGCCAGCCCCGGCA
ACCTCAACAATGTGCTTACGCAGAAGCACGTCTCTCGTATGAATCCGAGCCTGCACCAGGAGCCAGGCGAAGAAA-----
----CTTGGGGCGTAGCTCGTCCAGATGAAGTTGGCGAAA-GGCGCTCCCACACCACCAAAGTGGCATAGCTGGTAAACC
CCGGCAGAGGAGAGGTCGGTCCCTTTGGCATAGCCCGGGCGGAGAGCACGAGCGTCGGCCTCCTCGGACAGGACCAGC
>chr3B_2383
GGGTGCGGT-----------------------------------------------------------------------
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--------------------------GGTGCAACATTAGGTGGTTAGGCACTGAATCCACACATCGGCAGCGTCCTTGAG
GGCTGCAGGGAGGCGGACACGCCACAACACGACATCCTCTCTGCAAAGCTGCAGTAGC-CGGGGAAGCGAGGGTGGCATG
CTCTGGAAGACCACCGCGTTGCGGTGCTTTCAAAGTTGCCAGCAGCAAAGAAGCAAGAAAGCCGGCCCCATCTGAGGAGG
GACCAAGCCCGGAGGCGACATAAGGTGGAGCAGCTTGACGGTGGAGACTGCCGGCGTCACCCAGACCGAGGCCCAGAACT
GCTGGGCAAAGGGGCAAGCGAAGATGAGGTGGTCGGCCGTCTCTAGCGGAGCCGAGCAGATAGGGCAGCCTGCCCCGGCC
ACCTCAACAATGTGCTTACGCAGAAGCACATCTCTCGTGTGTATCCGAGCCTGGACCAAGAGCCAGGCGAAGAAGTGGAC
CCTGCTGGGGGCGTAGCTCGTCCAGATGAAGTTGGCGAAA-GGCGCTCCCACGCCGACAAAGTGGCATAGCTGGTATACC
CCGGTCGAGGAGAGAGCAGCGCCTTTGGCACAGCCAGGACGGAGAGCTCGAGTGTCGGCCTCCTCGGGCAGAATCAGC
>chr6B_2386
--------------------------------------------------------------------------------
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--------------------GCGGAGGTGCCGCATCTAGGCGGTGAGGCAATAGATCCATACATCGGCAGCGCCCTTGAG
GGCCGTAGGAAGGCGGACACGCCACAGAACGGCATCCTCTCTGCACAGCTGCAGAAGCTCGGGGGAGCGAGGGTGGCATG
TTCTGGAAGACGACCGTGTTGTGGTGCTTCCAAAGTTGCCAGTAGCAGAGAAGCAGGAACGCCGCCCCCGTCCGAGGAGG
GACCAAGCTCGGAGGCGACATAAGGTGGAGCAGCTTGACGGAAGAGACATATGGTGCTGCCCCGACAGAGGCCCATAATT
GTCTGGCGAAGAGGCAAGCAAAGACGAGGTGGTCTGCTGTCTCCAGCGGAGCCGAGCAGATAGGGCAACCCTCCCCGGTC
ACCTCAACAATGTGCTTACGCAGAAGCACATCCCTCATGTGAATCCTAGCCTGGACCAGAAGCCAGGTGAAGAAGCGGAC
CCTGCTTGGGGCGTAGCTCGTCCAGATGAAGGTGGCGAAA-GGAGCATCCACGCCACCAAAGCGGCATAGGTGGTACACC
CCGGCCGAGGAGAGAGCGGCGCCTTTGGCACAGCCAGCACGGAGAGCACGAGTGTCGGCCTCCTCGGACAGAACCAGC
>chr7D_2391
--------------------------------------------------------------------------------
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-------------------------GGGTGTAACATTAGGGGGTTAGGCACCCAAGCCACACATCAGCAGCCTGCTTAAG
AGCGGCTGGGAGGCGAACACGGCAGAGAACGGCGTCCTCTCTACATAGTTGTAGCAGC-TGGGGAAGCGATGGTGGCAAG
CCCTGGAAGACGACCGCGTTGCGGTGTTTCCAAAGTTGCCAGCAGCATAGAAGCAGGAAGGTCGCCCCTGTCCGGGGGGT
AT-CAAGCTCGGTGGCGAAATAAGGTGTAGCAGCTTGACAGAGGAGACCGTTGGAGCCGCCCCAACCGAGGCCCAGAACT
GTCGAGCAAAGGGGCAGGCGAAGATGAGGTGGTCGGCCGTCTCTAGCGGGGCTGAGCAGATTGGGCACCCTGCCCTGGCA
GACTCAACAATGTGTTTACGCAGCAGGACATCCCTCGTGTGTATCCGAGCCTGGACCAGGAGCCAAGTGAAGAAACGGAC
CCGGC-TGGGGCATAGTTTGCCCAGACGAAGTCGACGAAC-GGTGCTCTCACTCCACCGAAGTGGCAGAGTTGGTA----
------------------------------------------------------------------------------
>chr7D_2392
--------------------------------------------------------------------------------
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--------------------------GGTGCAACATTAGGCGGTTAGGCACTGAATCCACACATCGGTAGCGTCCTTGAG
GGCCGCAGGGAGGCGGACACGCCACAACACGACATCCTCTCTGCAAAGCTGCAGCAGC-CGGGGAAGCGAGGGTGGCATG
CTCTGGAGGACCACAGCGTTGCGGTGTTTCCAAAGTTGCCAGCAGCAAAGGAGCAAGAAAGCCGGTCCCATCCGAGGAGG
GACAGAGCCCGGAGGTGACATAAGGTGGAGCATCTTGACGGTGGAGACTAACGGGGCCGCCCCGACCGAGGCCCAGAACT
GCTGAGCAAAGGGGCAGGCGACGATGAGGTGGTCGGCCGTCTCGAGCGGAGCCGAGCAGATAGGGCAGCCTGCCCCGGCC
ACCTCAACAATGTGCTTACGCAGAAACACATCTCTCGTGTGTATCTGAGCCTGGACCAGGAGCTAGGCGAAGAAGCGGAC
CCTGTTGGGGGCGTAGCTCGTCCAGATGAAGTTGGCGAAG-GGCGCTCCCACTCCACCAAAGTGGCATAGCTGGTATACC
CCGGCTGAGGAGAGGGCGGCGCCTTTGGCACAGCCAGGACGGAGAGCCCGAGCGTCGGCCTCATCGGACAGAACCAGC
>chr2B_2467
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--------------------------GCACGGCGTCCTCCCTACACAGTTGCAGCTGC-CGAGGGAGTGACGGGGGCAAC
CCCTGGAAGACCACCCCGTTGCGGTGTTTCCAAAGTTGCCAGCAGCAGAGAAGGAGGAAGGTCGAGCCCGTCCGCACCGG
CACCGAGGCAGGCGGGGGCACAGTGTGCAGCAGCTCAACGGATGATACGGTGGAAGCGACTCCCACCACAGACCAAAAGC
GCTGAGCAAAAGGACAGTCGAAGATGAGATGGTACGCCGACTCCAGGGGCGCTGAGCAGATGGGGCAGCCAGCCCCCGCC
GCCTCCACAATGTGCTTCCGCAGGAGGACGTCCCTTGTCTGGATCCGGGCCTGGATCAAGAGCTAGGCGAAGAAGCGGAT
GCGACTCGGAGCGTAGTTTTTCCAGACAAAATTGGCGTACGGGCGCAAGCACCCCACCAAAGTGGCATAGTTGGTAGAGG
CCGGCGGAGGAGAGCGCAGTACCCTTGTCACAGCCGGGGCGAAGGATCCGAGCATCTGGCTCC---------------
>SNPs
SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------S---S---------------------------S------
-------------------------------------------------------------------------S------
----------------S---------------------------S----S--S------------------S------S-
-----------S-----SSSSS-----------S--SS---------S--------------------------------
------------------S-------------S--S----------------------S---------------------
---------------------------------------------------------------S--------S-S-----
----S--------------S----------------------------------------S-------------------
--------------------S----S-------------------S--------------------S------S------
---S-------------SS----S-----SS---------------------S--------S------------------
--------------S--------S-----------------S-------------------------S------------
------------S--------------------------S--S-------------------------------------
----------------------------------S---------S-----------------------------------
-------------------------------------------S----------------------S---S-S-------
----S---------------------------S----------------------------------------S------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-S---------------------------------------S--------------------------------------
---------------S--S-------S-----------------------------------------------------
-----------------------------------S-----------------------------------------SS-
---------S----------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------S---------------------S-----------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS---------------------------------------------S-SS--S--------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------------------S-------------------------------S-----
--------------------------------------------------------------------S--------S--
--------------------------------------------------------------------------------
---S--------------------------------------------------------------------------
>forward_69
-------------------------------------------------TGGGGTCTGCTAGAGATGCT-----------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_1111
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------TATCTGGGAC
CACGTGGACT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_293
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGGGTTTGTGTTCTGCCCAA---------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2021
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------TCCAACTAGATAGGGCGACG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1084
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------CTTGGCCCATCTGGAACCTT------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2795
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TCGGCC
ACCTCAACAATGTG------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
