>input_sequence_63515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ATGGCCATGGACCAAGAGCTGCCG
CTCGGGCTCGGCGACTTCTCCATCGCCATGGACGCCTCCTCCCTCGCCGCCCTCTGGCCCCCGACGCCGCTCCTCCCGCC
GGATCTCCAATCTGCTT---ACCAAGACCAAGAGGTTCGCCGGCCATCTTAAATCTTCTCCCGCCT--------------
----TCTTCCTCCCTGCCTCTCTCTCAAGTCTTGACTGAGAAACTGCGCCCTGCCGATTTTCTTCTTC-----GAATCCA
GACGTTTACATAGGTTG----TTGATTGAAACTGTAATGAGATCCTCCATAGATCTTGAGCAGACGTTGAAGCCCTTT--
-------CCGTTGGGTGAGATCGTGCATTGCTGCTCCTTTGGCTTAATCTTTGTCGCT--GTGGCGTGGCATGCAGAGCT
CTTCGTCGCCGTGGCGTGGCATGCAGCAGATCGTGGAGGAGGCGAGGCGGAGGCTGGCCGCGGCCACAGCAGAGCTGGAG
GCGACCAAGGAGGAGGTGCGCCGCAAGGAGCAGAGCATCGCCGCCCTGCTGGAGCTCGTGCGCCGCATGGCCGACGAGCG
CGACCAGCTCCAGCA---------CCAGGTCCGGCAGCACCTGCTGCTGGCCCGCGAGCTGGCGGCCGCGACGACGTCCA
GCAGCAGCGACTCAGGCGCGAGCTTCCCGACCTTCTCCCCGACGGCCGCCAACCCCTCCACCTTGCTCAAGGCCAGCGCC
GCCGTTGAGGA--------------------------------------------------------------------C
AGGAGCGCACCAGTTGCTATCGACGACGACAGGACCGCGGCGGTGCTCGAGCAGCTGGCGGCCAAGAGGCCGCTGCCACA
GCAGGGGCAGCTGCTGCAGGCGGTCATGGAGGCAGGGCCTCTCCTGGAGAACCTGCTGGTGGCAGGGCCAGTGCCGCAGT
GGCGCGACCCGCCGCCGGTGCAGCCGATCCCCAGCCCCGTCATATCGGCGCCTTCAGGCTCTCGTGCTCCCATGGGCT-G
GGGCCATGGTAGCAGCTCTTCTCTCTTTTTTTCTACTCATCAACGATAC-TAG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>chr3B_1_TraesCS3B01G608300
GTCGGGCCCAACTGCACTGCACGTACGCAGTTGTTTGCACGGTCCAATGAGAGACGTACGCACAGGACGCATGCATGCGG
GACTTTGGTGCAACCATGCATGCATGCAGAGCAGTCGCCGCCGCGCGCGTGCGTTGCGGGGACATGTGGGCCCGGTGTAA
CACATCCGGGTCGCACCGCAACCACCCTCACCTGACGGGGGCCTCGGCGTGCATGCATATACGAACAAAAAACATGTTTG
GTTATTTTTTTAAAACGTGTTTTTTTAACACAGTACAACCGAAGTCGCTCACACATAGGAGCATACTCACACTGTTCCTT
TTTTTAATCATGTGTACATTTCTTATAGGGTTTAGTACATCTGCAATACTGTCCTTGCCCATAAGACATGTACGTAAAAC
ACAGTCTACTATATTAATTCTTTCATCTTAATTTTGCCTGCTGGTATTTTTACAATACTTGTGGAGCTAATGAAACTATT
TTGGTAAAATTCAATGCTCGAAATGGAGGAAATGAAGGGGCCAGACGGGCCGATACCTCGTGGGAGGGCCCAACACGAGG
AAAGGAAGGAGACACAAAGGTGAAAAGGGAAAAAGGGAAGACGGAAAGAGTAACGGCGAGGACGGTCCTTTCTTTCTTCA
TAGGACTAGGAAGGATCCCCGGCCAGGCAACCAGCATCTTCTCATAATCCCATTCCCTTTT----------TAATTAATT
AATTAATTAATTAATCTATAATAACTTTCATCATGCGATT-----------------TCGTGT----TTCTCATCCAAGC
ACAGGTGATAATAGGCAGGCGTGATGGCACATTCCATATGTTCCCATTCGGGAATGGAAACACGGGCGCCGTGTATGGAA
GGGAGC-AAAACCACATTGACTCCT--------------------TGGCCTCCCTTCCTATACAAAAATCTCCCTCTCC-
-----------CTACGGCTTCCTTCTTATTTCA--TCACCGTGTCTTCTTCTTCTTTTGC--------CATCCCAATCCC
AAAGGAAGGGAGGAGACGAGAGGAGAGATCAA----------------------CAATGGCCATGGACCAAGAGCTGCCG
CTCGGGCTCGGCGACTTCTCCATCGCCATGGACGCCTCCTCCCTCGCCGCCCTCTGGCCCCCGACGCCGCTCCTCCCGCC
GGATCTCCAATCTGCTT---ACCAAGACCAAGAGGTTCGCCGGCCATCTTAAATCTTCTCCCGCCT--------------
----TCTTCCTCCCTGCCTCTCTCTCAAGTCTTGACTGAGAAACTGCGCCCTGCCGATTTTCTTCTTC-----GAATCCA
GACGTTTACATAGGTTG----TTGATTGAAACTGTAATGAGATCCTCCATAGATCTTGAGCAGACGTTGAAGCCCTTT--
-------CCGTTGGGTGAGATCGTGCATTGCTGCTCCTTTGGCTTAATCTTTGTCGCT--GTGGCGTGGCATGCAGAGCT
CTTCGTCGCCGTGGCGTGGCATGCAGCAGATCGTGGAGGAGGCGAGGCGGAGGCTGGCCGCGGCCACAGCAGAGCTGGAG
GCGACCAAGGAGGAGGTGCGCCGCAAGGAGCAGAGCATCGCCGCCCTGCTGGAGCTCGTGCGCCGCATGGCCGACGAGCG
CGACCAGCTCCAGCA---------CCAGGTCCGGCAGCACCTGCTGCTGGCCCGCGAGCTGGCGGCCGCGACGACGTCCA
GCAGCAGCGACTCAGGCGCGAGCTTCCCGACCTTCTCCCCGACGGCCGCCAACCCCTCCACCTTGCTCAAGGCCAGCGCC
GCCGTTGAGGA--------------------------------------------------------------------C
AGGAGCGCACCAGTTGCTATCGACGACGACAGGACCGCGGCGGTGCTCGAGCAGCTGGCGGCCAAGAGGCCGCTGCCACA
GCAGGGGCAGCTGCTGCAGGCGGTCATGGAGGCAGGGCCTCTCCTGGAGAACCTGCTGGTGGCAGGGCCAGTGCCGCAGT
GGCGCGACCCGCCGCCGGTGCAGCCGATCCCCAGCCCCGTCATATCGGCGCCTTCAGGCTCTCGTGCTCCCATGGGCT-G
GGGCCATGGTAGCAGCTCTTCTCTCTTTTTTTCTACTCATCAACGATAC-TAGGAATTCATGTATTTTCAGACTTATCTC
AGGCGGAAAGCAAGGTGCCATCTACTATGAAAAGTTTTG--------TAATCTTTGTAGACTGAACTTTTCCTGAATTGA
TTGAACATACAGAAGAAACGAAAAG----------AAAAGAAACAGTTTCTTCAAACCCATATATATGATG---T-AATC
TGGACTCCATGGGGAATTAGGAGGTTACAGGCCGC--------AGAAATGAGAAATGGCACCCGATCGCATCGACAAGAT
GCACCGG------AAAAACCAATTATTGGCTTGAACTTTGTCTTGAACAACGATCATCATG-AATAAAAAGGACCACATT
TGCGATAATGTTAC------------AGAGACAAACCTCATACATCTCCCCAACAGTGATGGTATTGCCTGTG-------
-TCGGTATGATAAGTAC---ATGAATCATGAAAACATTCGACGGAAGAGGCAAAAAAGAAAAGTAC-ATGAATTTACATA
CAAGACAAAATATCACCAGGCAATGGTGCTTTCTCCGTATATGAACACTCTGTCCTCTA---AATCCCTGATCCACTGGC
ATACTCTGTTGCATATCTTGATCGCTTGGGTCTGCAA----AATGCGTGTACTCAAAGTAAGATCCATCAGGTTATTACA
CGGTG---ATAGATGATGGGATTGATAGTATTGCTGAACTGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTGTGGC-----AGATGCTAACCTTGTCGGCCAGCGGACTGAAGGCTGCATACAGCTCAAAATCCTGGGTTATCCAG
CTCAACATAACTGCAACAAAAGGGAAATTA----TGTAACAAAGTAACTGCGGCACACATAGGGAAATAGGAAATAGCAT
CACACTTCAGCTAGTAAAATTCAAGAAAATTCACGACTAAGGTACTC----CTAGGACATCAATGCCACAGAACCACTAC
TGCAGCAAGCAATAACAGCTAG------------------GCAGTTTATATGCCTATGGGTACG------TGTCCATTA-
---------GCAGAATGGATGGTACTACTGAATGGTTTTAGGTCTTTGAATTAAGTGGTATCAATTCAATGTAAAGTAGA
ACATCATACTGC
>chr3A_54
-----------------------------------------------------ACGTACGCACAGGACGCATGCATG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CGGGAGGGCTGATACCTCGTGGGAGGGCCCAACACGAGG
AAATGAAGGAGACACAAAGGTGAAAAGGGCAAAAGGGAAGACGGAAAGAGTAACGGCGAGGACGGTCCTTTCTTCCTTCC
---------------------GCCAGCCAACCAGCATCTTCTCATAATCTCATTCCGTTTTTACTGTAATGTAATTAATT
AATTATTAAATAC-----TAATAGCTTTCACCATGCAATTTATTTTACTGCTATATCTCGTGT----TTCTCGTCTATAG
--AGGAGATAATAGGAAGGCGTGATGGCACATTCCAAATGTTTCCATTCGGGAATGGAAACACGGCCGCCGTGTATGGAA
GGGAGGAAAAACCACATTGACTCGTGGCGCTGGCTGTACACCATCTGTCCTCCCTTCCTATCCATCTCCG----------
----------TCTACGGCTTCCTTTTTATTATTATTCACCATGCCTTCTTCTTTTGCCACAAGGCAGGCATCCTAATCCC
AAAGCAAGGGAGA--------------------------------------GATCAATGGCGATGGACCAAGAGCTGCCG
CTCGGGCTCGGCGACTTCTCCCTCGCCTCCCTCTG------------------------------GCCGCTGCTCCCGCC
GGATCTCCAATCTACTTCTTACCCAGACCAAGAGGTTCGCCGGCCATCTTAATTCTTCTCTCCGCCTTCTTCTCTAAT--
--------------------------------------------------------------------------------
------------GGTTG----TTGATTGACACTCTAGTGAGATCGTCTGTAGATCTTGAGCAGACGTTGAAGCCCTTTGG
TGATCTTCCATTGGGTGAGATCGTTTAA---------------------------------------------------T
CTTTGTCCCCGTGGCGTGCCAT---GCAGATCGTGGAGGAGGTGAGGCGGAGGCTGGCCGCGGCCACGGCGGAGCTGGAG
GCAGCCAAGGAGGAGGTGCGCCGCAAGGAGCAGAGCATCGCCGCCCTGGTGGAGCTCGTGCGCCGCACGGCCGAGGAGCG
CGACCAGCTCCAGCAGCACCTTGACCAGCTCCGGCAGCACCTGCTCCTGGCC---------------GCGACAACGTCAA
GCAGCTGCGACTCAGGCGCCAGCGTCCCAACCTTCG------------------------CCTTGCTCAAGGCCAGCACC
GCCGTTGACAGGAGCACAGCCATCGCCATAGATATCAGGAGCGCGCCGTTGACAGGAGCACAGCCATCGCCATAGATATC
AGGAGCGCGCCAGTTGCCATCGACGACAACAGGACCGCGGCGGTGCTCGAGCAGCTGGCGGCCAAGAGGCCATTGCCACA
AAGGGGGCAGCTGCTGCAGGCGGTAATGGAGGCAGGGCCTCTCCTGGAGAACCTGCTGGTGGCAGGGCCAGTGCCGCAGT
GGCGCAACCCGCCACCTGTGCAGCCAATCCCCAGCCCCGTCATATCGGCGCCTTCAGGCTCTCGTGCTCCCATGGGTTGG
GGGCCATGGTAGCGGCTCTTCTCA----TTTTCTACTCGTCGACGATACTTAGGAATTCATGTATTTTCAGACTTATCTC
AGGCGGAAATCAAGGTGACAGCTACCATGAAAAGTTTTG--------TAATCTTTGTAGACTGAACTTTTTCTGAATTGA
TTGAACATACAGAAGAA-----AAG----------AAAAGAAACAGTTTCTTCAAACCCATATACATGATG---TAAATC
TGGATTCCATGGGGAATTAGGAGGTTACAGGCCGC--------ATAAATGAGAAATGGCACCCGATCCCATCGACGAGAT
GCAGATGG------AAAACCAATTATTGGCTTGAACTT-GTCTTGAACAATGATCATCATG-AATAAAACAGACCACATT
TGTG--AATGTTAC------------AGAGACAAACCTCATACATCTCCCCAACAGTGATGGTATTGCCTGTG-------
-TCGGTATGATAAGTAC---ATGAATCATGAAATCATTCGACGGAAGAGGCAAAAG-AAAAAGTAC-ATGAATTTACATA
CAAGACAAAATATCACCAGGCAATGGTGCTTTCTCCGTATATGAACACTCTGTCCTCTA---AATCCCTGATCCACTGGC
ATACTCTGTTGCATATCTTGATCGCTTGGGTCTGCAA----AATACGTGTGCTCAAAGTAAGATCCAACAGGTTATTACA
CGGTG---ATAAATAAC-GGATTGATAGTATTGCTGAACTGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTGTGGC-----AGATGCCAACCTTGTCGGCCAGTGGGCTGAAGGCTGCATACAGCTCAAAATCCTGGGTTATCCAG
CTCAACATAACTGCAACGAAAGGGAAATTA----TGTAACAAAGTAACTGTGGCACACATAGGCAAATAGGAAATAGCAT
CACACTTGAGCTAGTAAAATTCGAGAAAACC---------------C----CTAGGACATCAATGACACAGAACCACGAC
TGCAGCAAGTAGAGACATATCTGGTGCC-CATAACAGCTAGCAGCTCATATCCCTATGGGAGTATGGGTATGTGTCTGTG
AGCAGAAC--------GGATGGTACTACTGAATGGTTTTAGGTGTTTGAATTAAGTGTTTCCAATTCAACATAAAATAGA
ACAGCATACTGC
>chr3D_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AAATGGAAAAAATGAAGGGGCCGGACGGGGTGACACTTTGTGGGAGGGCCCAACACGAGA
CAAGGAAGGAGACACAAAGGAGAAAAGGGCAAAAGGGAAGACGGAAAGAGAAACGGCGAGGACGGTCCTTTCTCCCTAAG
CT---------AGGATCCCCAGCCAGCCAACCAGCATCTTCTCATTCCCTTTT---------------------------
---------------------TAACTTTCACCATGCAAAATAATAATAATAATTTGGAATATGCATGTTCTCATCCGAAC
ACAGGTGATAATAGGCAGCCGTGATGGCACATTCCATATGTTTCCATTCAGGAATGGAAACACGGCCGGCGAGTATGGAA
GGGAGC-AAAACCACATTGACTCCTGGCGCTGGCTGTACACCATCTGTCCTCCCTTCATATCCCCTTCTCTCTCTCATAC
ACAACCGACCTCTACGGCTTCCTTCTTTTGCC-------------------------------------------ATCCT
AAAGGAAGGGAGGAGACGAGAGGAGAGATCCAAGAGCAGAGACAAGTGATTGATCAATGGCGATGGACCAAGAGCTGCCG
CTTGAGCTTGGCGACTTCTCCATCGCCATGGACGCGTCGTCCCTCGCCGCCCTCTGGCCGGCGACGCCGCTGCTCCCGCC
GGATCTCCACTCTA---CTTACCCAGACCAAGAGGTTCGCCGGCCATCTTAAATCTTCTCTCCGCCTTCTTCTCCTCCAA
TACATCTTCCTCCCTGGCTTTCTCTCAAGTCTTGACTGAGAAACTGCCCCTGCTGTCGACTACCTTCCCTGATGAATCCA
GACGTGTACATAGGTTGCTGATTGATTGACACTGTGGTGAGATCCTCCATGGATCTTGAGAA------------------
TGATCTTCCATTGGGTGAGATCGTGCATTACCGCTCCTTTCGCTTAATCTTTTTGTCGCCGTGGCGTGGCATGCAGAGCT
CCTCGTCGCCGTGGCGTGCCAT---GCAGATCGTGGAGGAGGTGAGGCGGAGGCTGGCCGCGGCCACGGCGGAGCTGGAG
GCGGCCAAGGAGGAGGTGCGCCGCAAGGAGCAGAGCATCGCGGCCCTGCTGGAGCTCGTGCGCCTCACGGCCGAGGAGCT
TGACCAGCTCCGGCAGCACCTTGAGCAGCTCCGGCAGCACCTGCAGCTGGCCCGCGAGCTGGCGGCAACGACGACGTCAA
GCAGCAGCGACTCGGGCGCGAGCGTCCCAACCTTCTCCCCACCAGCCGCCAACCCCCCCACCTTGCTCGAGGCCGGCACC
ACCGTT-----------------------------------------------------ACAGCCATCGCCATAGATACC
AGGAGCGCGCCAGTTGCTATCGACGACGACAGGACCGAGGCGGTGCTCGAGCAGCTGGCGGCCAAGAGGCCATTGCCGCA
GCGGGGGCAGCTACTGCAGGCGGTGATGGAGGCAGGGCCTCTCCTGGAGAACCTGCTGGTGGCAGGGCCGGTGCCGCAGT
GGCGCAACCCGCCACCTGTGCAGCCGATCCCCAGCCCCGTCATATCGGCGCCTTCAGGCTCTCGTGCCCCCATGGGTTGG
GGGCCATGGTAGCAGCTCTTCTCA----TTTTCTACTCGTCGACGATACT-AGGAATTCATGTATTTCCAGACTTATCTC
AGGCAGAAAGCAAGGTGCCAGCTACTATGAAAAGTTCTG--------TAATCTTTGTAGACTGAACTTTTTCTGAATTGA
TTGAACATACAGAAGAACAGAAAAG----------AAA------------------CCCATATAGATGATG---T-AATC
TGGATTCCATGGGGAATTAGGAGGTTACAGGCCGC--------ATAAATGAGAAATGGCACCCGATCGCATCGACGGGAT
GCACAGG------GAAGACCAATTATTGGCTTGAACTT-GTCTTGAACAATGATCATCATG-AATAAAACAGGCCACATT
TGCG--AATGTTAC------------AGAGACAAACCTCATACATCTCCCCAACAGTGATGGTATTGCCTGTG-------
-TCGGTATGATAAGTAC---ATGAATCATGAAAACATTCGACGGAAGAGGCAAAAG-AAAAGGTAC-ATGAATTTACATA
CAAGACAAAATATCACCAGGCAATGGTGCTTTCTCCGTATATGAACACTCTGTCCTCTA---AATCCCTGATCCACTGGC
ATACTCTGTTGCATATCTTGATCGCTTGGGTCTGCAA----AATACGTGTGCTCAAAGTAAGATCCATCAGGTTATTACA
CAGTG---ATAAATGAT-GGATTGATAGTATTGCTGAACTGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTGTGGC-----AGATGCTAACCTTGTCGGCCAGTGGACTGAAGGCTGCATACAGCTCAAAATCCTGGGTTATCCAG
CTCAACATAACTGCAACAAAAGGGAAATTA----TGTAACAAAGTAATTGTGGCACACATAGGTAAACAGGAAATAGCAT
CACACTTGAGCTAGTAAAATTTG------------------------------AGGACATCAATGAAACAGAACCACAAC
TGCAGCAAGTAAAGACATATCTGGTGCCTCATAACAGCTAGCAGCTCATATCCCAATGGGTACG------TGTCTATGTG
AGCAGAAATGCAGAATGGATGGTACTACTGAATGGTTTTAGGTGTTTGAATGAAGTG-----------------------
------------
>chr6D_2030
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----GAAACCAAGGTGCCAGCTACTATGAAAAAGTTTTGTGCGTACTACTGTTTTTAGACTAAAC-TTTTCTGAATTGA
TTGAATATACAGAAAGGAAGAAAAACAGTTACTCCAAA------------------CCTATATGTATGACG---T-AATT
TGGATTCCATAGAGAACTAAAAGGTTACAGGCCAAG--TACATGGAAAAAAGAAATGGCGCCCGACCGCATCGACAA---
--AAGATACACATAGAAACCAATTATTGGCCTTAACTT-GTCCCGAATAACGATCATCATT-AAT----AGGGCCACATT
TACA--TTTGTGATAATTTTACCGAGAGAGACGAACCTCACACATCTCCCCAGCAGTGGTGGTATTGCCTGTGTGGCTGT
GTCAGTATGATAAGTACATGATGAATCATGAGAAATTTCGACTAAAGAAACAAAA--CAAAACAAATACGAATTTACATA
CAAGACAAAATATCACCAAGCAATGGTGCTTTCTCCGTTTATCAACACTCTGTCTTGTACTAGATCCCTAATCCATTGGC
ATACTTTGTTGCATATCTTGATC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>chr6B_2059
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------TTTTG--------TAATGTTTTTAGACATAAC-TTTCCTGAATTTA
TTAAACATACAG------------G----------GAAAAAATAAGGTTCTCCAAACTTATATATATGATGTATT-AATT
TGGATTCCATGGGGAATTAGAAGGTTACAGACCAAGCATACATATAAATAAGAAATGGCGCCTGATGGATCGCAGCATCG
ACAAGATACAAATAAAAACCAATTATTGGCCTTAATTT-GTCCTGAACAATGACCATGAAATAAAAAAAAGGGCCACATT
TACA--TTTGTAATGGTGTTAAAGAGAGAGACAAACCTCATACATCTCCCCAACAGTGATGGTATTGCCTGTG-------
-TCAGTATGGCAAGCAC---ATGAATCATGAAAGATTTCGACGAAAGAAACAAAAAAAAAAAGTAC-ACGAGTTTACATA
CAAGACAATATATCACCAGGCAATGGTGCTTTCTCCATGTATGAACAGTGTGTCTTGTA---GATCCCTGATCCACTGGC
ATACTCTGTTGCATACCTTAATCGCTTGGGTCTGCAAGCAAAATGCGTGTACTCAAAGTAAGATTAGATACACCAGGACA
GTATTACTATAGATGAT-GCATTAATCGCATCGCTGAACTGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ATGTAGGCAGATAGATGCCAACCTTGTCAGCCAGTGGACTGAAGGCGGCATACAGCTCAAAATCCTGGGTTATCCAG
CTAAACATAACTGCAACAAAAGGGAAATTGGTTGTGTAACAAAATAACTGTGAAACACTTGGGCAAACAGGAAACAGCAC
G---GTTGAGCTAGTAACTTCC----------ACGGCACATGCAGGTACTGCTAGGACATCAATACCACAGAACCACAAC
TGCAGCAAGCAAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>chr6D_2322
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AGAGACAAACCTCATACATCTCCCCAACAGTGATGGTATTGCCTGTG-------
-TCAGCATGTTAAGCAC---ATGAATCATGAAAATTTTCGACGAAAGAAGCAAAAA-CAAAAGTAC-ACGAGTTTACATA
CAAGACAAAATATCACCAGGCAATGGTGCTTTCTCCGTGTATGAACACTCTGTCTTGTA---GATCCATGATCCACTGGC
ATACTCTGTTGCATACCTTGATCGCTTGGGTCTGCAAGCAAAATGTGTGTACCCAAAGTAAGATTACATACATCAGGACA
GTATTACTATAAATGAT-GCATTGATCGCATCGCTGAACTGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ATGTAGGCAGATAGATGCCAACCTTGTCAGCCAGTGGACTGAAGGCTGCATACAGCTCAAAATCCTGGGTTATCCAG
CTAAACATAACTGCAACAAAAGGGAAATTGGTTGTGTAACAAAATAACT-TGAAACGCTTAGGCAAACAGGAAACAGCAT
G---CTTGAGCTAGTAACTTCG----------ACAGTGCAGGTATTC----CTGGGACATCAATGCCACAGAACCACAAC
TGCAGCAAGCAAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>chr6A_2328
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AAACCTCATACATCTCCCCAACAGTGATGGTATTGCCTGTG-------
-TCAGTATGGTAAGCAC---ACGAATCATGAAAAAATTCGACGAAAGAAGCAAAA--CAAAAGTAC-ACGAGTTTACATA
CAAGACAAAATATCACCAGGCAATGGTGCTTTCTCCGTGTATGAACACTCGGTCTTGGA---GATCCATGATCCACTGGC
ATACTCTGTTGCATATCCTGATGGCTTAGGTCTGCAAGCAAAATGCGTGTACCCAAAGTAAGATTACATACATCAGGACA
GTATTACTATAAATGAT-GCATTGGTCGCATCACTGAACGTTGTTGCGGGAATATTTTGCAACATATTTCAATGTGATTC
GTTGTATGAATAATGAATAACTGAAGTAATAATATAAAAAGCTAAAACTGAAAATACATATAATTTATTATGTTTGATTA
CTATATAATTGTAATTTTTTTATTAACTATAAATAGCATAGTAGAATGAAAATTCTCTTGAATGTTTGCATGTTGAGATG
AGTCTTTTTTTCATGCATGTTTAATGATGAAGTGACATGCTTGCATGTTGGGAGACATATGATAGTGGAGGTGGGCCTTT
TCTCATGCATGCTATGGGATGATGTGGCATTCTTGCATGTTGAGAGAAATAGTTAGTGGGGGCTAGCTATTTAGATATAG
AAGATGTAGGCAGATAGATGCCAACCTTGTCAGCCAGTGGACTGAAGGCTGCATACAGCTCAAAATCCTGGGTTATCCAA
CTAAACATAACTGCAACAAAAAGGAAATTGGTTGTGTAACAAAATAACT-TGAAACGCTTAGGCAAACAGGAAACAGCAT
G---CTTGAGCTAGTAACTTCG----------ACGGCGCAGGTACTC----CTGGGACATCAATGCCACAGAACCACAAC
TGCAGCAAGCAAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS-------SS-------------S-------S-----------------------------
-----------------------------S--------------------------------------------S----S
SSSSSSSSSSS---------S-----S----------------------S------S-----------------------
-----S-S---SSSSSSS------------S-----S-----------------------------------------S-
------------------------------------------S----------------------S--------------
-----------------------------------------------S-------------S--SSSS----S---SSS-
------------------------------S-S-------S--S---------S-SSSS--------------S------
------------------------------S------------------------------S------------------
-----------------------------------S--S--------------------SS----------S--------
-------------S---------S------------------------------------S-SS-S--------------
----------------S--S---------------------------S--SSSSSSSSSS-SSSS-S-------------
-----S-----------------------S------S-------------------------------------------
---------S-------------------S-S--------S-----------S-SS-S----------------------
------------------S---SSS-----------------S------------------------S--S---------
---S---------------------------------------------------------------S------S-----
----------------------------S-------------------------------------S-----------S-
-----------------------S----S-----------SS-S------------S--------------------S--
--------SSS---------------------------------------------------------------------
--------S--------------------------------------------------------------SS-------
--S---------------------S-------------------------------------------------------
-----S-------S--S-----------------------------------------------------------S---
-----------------------SSSSS----------S--S--------------------------------------
--------------------S-----------------------------------------------------------
------------------S-------------------------------------------------------------
----S---------------------------------------------------------------------------
----S---------------------------------S-----------------------------------------
----SS--------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------S------------S----------------
-------S--------------S------SSS---S-SS--------------------------------------S--
-------------S---SS-SS----------------------S-S----S----------------------S--SS-
-------------------------------------------S-------------S-SS--------SS----S----
---S--------
>forward_37
-----------------TGCACGTACGCAGTTGTTTG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_1929
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACCAGTTGCTATCGACGACG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_39
-------------------CACGTACGCAGTTGTTTGCA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_2157
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTGG
GGCCATGGTAGCAG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_40
--------------------ACGTACGCAGTTGTTTGCAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_2188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TTTTTCTACTCATCAACGATACTAGGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AACCGAAGTCGCTCACACAT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_2405
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CTCCATGGGGAATTAGGAGGT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
