>input_sequence_63506
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-------------CGATCCATGAGTGGCGCCAAGGAATTCGGGATAGGCGGTAAAAATAGCTTGGTGT--GGCCGTTGCG
TGGCTTTAAATAGACCAATGCATGGATAAAGCACCCCCTTTTTTACCTCCCTCCCCGCTTTGTCACTGCTCACCACTACA
ACCCGTAGAGTAATTTAACTTAGGCTGATACAAAGATCCACAATTTACTGCACATTAGTCTTCCATTTCGGCAAAGGTAA
CTCGCATGATTCATTCTCCATGTACGTCTTTCTTGTGTTCAGATTTTTTTGTGGGGTTTGTATGAGAGGTTTCTGGGTAG
ACGATGGCAGTAATTTTGATAACATTTGTAGTACGATCTTCGTTGTTTCACCGGTTCTTGGTTCTGATCAAACGTTCGTT
GGAATGGTAGAGGTCGATCGAGATTGCCGTCGTCGTGGCTCGGTCGATGGGGGGCAGCATGGAGGAGCAGCTGCAGGTGC
CGGCGGCGGCGAAGAAGATCGCGGTGCCGTTGAAGAAGCACCACCCCAACCTCCACGTGGCCCACGCCGGCGCGGGCAAG
GGCGGCGGGGAGGCGCCGGCGGTGATGGTGACCACGCCCAAGGCGGCGTCGCAGGGGCCGAAGCACGCGCACCTGCTGGC
GAGCCCCCGGGCGTGCCTCTGCTCGCCGACGACGCACGCCGGGTCGTTCCGGTGCAGGCTCCACCGCGCCGGCGCCGGCG
------CCGGCCTCCACGAGATGGGCAAGAAGACCAGCCCCGGCGCGTGACGCGCGCGCCCACCCGTCCGCACGTTCTTG
TTTCTCT-----TTTGCTGGATGGGTGGTGTGCAGTGCATGGAAAGGGAAAAGTGTTTTCTTTTCTCTCCTTCTTTTTGG
ATCCTCTATTTGCGTCGACGGGGAACTTCATCTGGTTTTCTGCAGTCGACGATTATGAATGTTGATCGATTCTGTACCTG
ATGGAACATGGCCATCTGTATATATAACAAAGTGTACATAACTGCCGGTTCAGGGATGGGCAAT----------------
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>chr7A_1_TraesCS7A01G378900
CCATCCGTCTGACCGCCCCCTGGTGATACCCCCGTCCAACCTAATTCGGCCGTCGGCTGATGGCCGCAAATTAACCAAAG
GAAAAGTTGTGCCTACATCCAAGCACCCATGACGAACAGTAAATTTATAACAAATAGCAAAAAAAGTGAAACTTCATGGC
ATTGATTATGAACTAATATCTTAGGCGTTTGTAAAGTTTGATGGTCAAATAACATCATATGAACTCTACACAAACTAAAT
ACAAATTCCCCTCAAACAGTGCACATAACAAAAAAGACATATTGCTGAAAACCGGCGGTGGCTTGAGAAAATCCCAATAG
GACGCATTTGAGCAATTTGTGATAAATGTATCGTTCAAAATCTGAACT--------------------------------
-----------------CCTTCGGAGGAAGAAAGTTGTGGAAAGGCAATCAGTTTCATTTATAATTTGCCACTAATTTTT
ATGTGAAAATTATGCTAACAATCATAACAAATCGGAGATAT--AAAAAGAAACTTATGGCATCGTTAAAAACGGTGCAAC
AAATGTGCTTCTAGTATATGCATATGGATGCAGATTTCCAAAAAAAAAACCAGAACAATTAGGTAGAATGTACCATAGGT
AGAAGACATAGAAGACAAAACTTATGGAGTAATCCCTCCGTCCGCGAATAAGTGTACATTTAGCTTTTATCTTAAGTCAA
AGTTTTAAAACTTTGACCGACTTTCTAGGGAAAAGTAGAAGCATTTATGGCACTAAATTAGTATCACTAGATCTGTTTTG
AAATGTACTTTGATAATATACCAATTTGATGCCATGTATGTTACCACTATTTTTTATGAAGTTGGTCAAAATTTTAAAAC
TTTGACTTAGAATAAAAGCTAGATGTACACTTATTCGTGGACGGAGGGAGTAATCTACACTTGGATGACCCACACAAATG
TCGCAAAATCACTCTAAAAATAGCGACCCCTTGACTCCTTATATTGGACTGTGCTCTGTCCATTTTGAATCTGCATGGAT
ATGGATATA--TCCGATCCATGAGTGGCGCCAAGGAATTCGGGATAGGCGGTAAAAATAGCTTGGTGT--GGCCGTTGCG
TGGCTTTAAATAGACCAATGCATGGATAAAGCACCCCCTTTTTTACCTCCCTCCCCGCTTTGTCACTGCTCACCACTACA
ACCCGTAGAGTAATTTAACTTAGGCTGATACAAAGATCCACAATTTACTGCACATTAGTCTTCCATTTCGGCAAAGGTAA
CTCGCATGATTCATTCTCCATGTACGTCTTTCTTGTGTTCAGATTTTTTTGTGGGGTTTGTATGAGAGGTTTCTGGGTAG
ACGATGGCAGTAATTTTGATAACATTTGTAGTACGATCTTCGTTGTTTCACCGGTTCTTGGTTCTGATCAAACGTTCGTT
GGAATGGTAGAGGTCGATCGAGATTGCCGTCGTCGTGGCTCGGTCGATGGGGGGCAGCATGGAGGAGCAGCTGCAGGTGC
CGGCGGCGGCGAAGAAGATCGCGGTGCCGTTGAAGAAGCACCACCCCAACCTCCACGTGGCCCACGCCGGCGCGGGCAAG
GGCGGCGGGGAGGCGCCGGCGGTGATGGTGACCACGCCCAAGGCGGCGTCGCAGGGGCCGAAGCACGCGCACCTGCTGGC
GAGCCCCCGGGCGTGCCTCTGCTCGCCGACGACGCACGCCGGGTCGTTCCGGTGCAGGCTCCACCGCGCCGGCGCCGGCG
------CCGGCCTCCACGAGATGGGCAAGAAGACCAGCCCCGGCGCGTGACGCGCGCGCCCACCCGTCCGCACGTTCTTG
TTTCTCT-----TTTGCTGGATGGGTGGTGTGCAGTGCATGGAAAGGGAAAAGTGTTTTCTTTTCTCTCCTTCTTTTTGG
ATCCTCTATTTGCGTCGACGGGGAACTTCATCTGGTTTTCTGCAGTCGACGATTATGAATGTTGATCGATTCTGTACCTG
ATGGAACATGGCCATCTGTATATATAACAAAGTGTACATAACTGCCGGTTCAGGGATGGGCAATTGCACAGCTCTAGTAG
ATCAAAAAGTTTCAGAATATACCTCGCCAAAAAAAAAAGTTTCGGAATATTTTTATACGCCTGGAAGAAAAAAGATCAAC
-TGTTGACAGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTTAATCTGGCGCCTTAGACCAACTCGGCCATATCA
ACTTGTTGGCAAAAAATCCTCCCGCAGAGATCATGAACGCTTTCTACCATCATCCTTCTGC----------------AAA
ACAATTTCTGAACCTGTCTCTCAATTTCATTCTAATTTGAAATATCACTGGGTA-TTACTAGCTAATTAGTATTGGGACA
AAGCATCATGTAAAC--CCAACATGGCGCACAGCACCTGATAACTTGGCCACCTAGCTCTGTGCAGTCTGCTCATCTGAT
GGCAACGAACGAAACAGACAGAGGTGACACTCTACAAAACCAGAGCATAGCAAAGAAAATGGCAACCAACAACATGCTAC
AGG---------------------------GCCACATAGTTGTAGGTTATATCACTAGTATGTAATACTGGTCTTTAGGT
AACAGGTTAAATAACACTGGTCTTTTCAGAAC---ACTAAAATGTACTCAAGGACAAGGTAGGTGAAAGTTGAAACATAG
ATGTATGCTAATGGTAGTTGAAAACTTGAAATTTGACGTATCTCAAGAAAATGCATAACTACAAACATGTGTTTCCAAAA
AGGCTCGGATCAATCATGTGAACATATAGCGAACTAAACCGTGCGTTCAGCAACGAAGAAAAGGGTCGTCGATGGTAAGG
TCCAGTGCTTTCTGCAAGTTCCAAGCACCGTCCACTTTGGGCGACACCAGCAACACTTTAGAGGCCCATGCTTGAAACTG
AGGACACCTGCATCTGTCTATAATCTCATTCACCTCCACCGCTGAAGTAAATTTTTCGTCGAACGGCACAAGCAGCAAAG
ACTCAAGCTCTTGCGCATCCCTGGCGATGAACTTGAGGAATTCAAATTCTTTTTGATTCCCTCGGAACTTGTGG
>chr7B_234
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-------------------------------------------------------------------------ACTAAAT
ACAAATTCTGCTCAAACAGTGCATATAATAAAAAAAGCATATTGTTGGAAACCGGCGGTGACTTGAGAAAATCCCAACAG
GACGCATTTGAGCAATTTGTGATAAATGTATCGTTCAACATCTGAACTCCTTAGAAATGGAAAGTTAGGGTTGCTACCAG
TGGTGGGGCTACAACTACCTTCAGAGGGAGAAAGATGTGGAAAGGCAATCAGTTTCATTTATAATTTGCCACTAATTGTT
ATGTGAAAATTATGCTAACAATCATAACAAATCAGAGATAT--AAAA--AAACTTATGGCATCGTTAAAAACGGTGCAAC
AAAGGTGCTTCTAGTATATGCATATGGATGCAGATTTCCAAAAG--AAAACAGAACAATTAGGTAGAATGTACCATAGGT
AGAAGACATAGAAGACAAAACTTATGGAGTAATC----------------------------------------------
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-------------------------------------------------------TACATTTGGATGACCCACATAAATG
TCGCAAAACCACTCTAAAAATAGTGTCCCCTTGACTCCTTATATTGGACTGTGCTCTGTCCATTTTGAATCTGCATGGAT
AAGGATATA--TCCGATCCATTAGTGGCGCCAACGAATTCGGGATAGGCGGTAAAAATAGCTTGGTGTGTGGCCGTTACG
TGGCTTTAAATAGACCAGTGCATGGATAAAGCACCCCCTTTTTTATCTCCCTCCCCGCTCTGTTACTGCTCACCACTACA
ACCCGTAGAGTAATTTAACTTAGGCTGATACGAGGATCCACAATTTACTGCACATTAGTCTTCCATTTCAGCAAAGGTAA
CTCGCATGATTCATTCTCCATGTACGTCTTTCTTGTGTTCAGATTTCTTGGGAGGGTTTGGATGAGAGGTTTCTGGCTAG
ACGATGGCAGTAATTTGTTAAACATTTCTAGTACGATGTTCGTTCTTTCACCGGTTCTTGGTTCTGATAAAACGTTCGTT
GGAATGGTAGAGGTCGATCGAGATTGCCGTCGTCGTCGCTCGGTCGATGGGGGGCAGCATGGAGGAGCAGCTGCACATGA
CGGCGGCGGCGAATAAGATCGCGGTGCCGTTGAAGAAGCACCACCCGAACCTCCACATGGCCCACGCTGGCGCGGGCAAG
GGCGGCGGGGAGGCGCCGGCGGTGATGGTGACCACGCCCAAGGCGTCGTCGCAGGCGCCCAAGCACGCGCACCTGCTGGC
GAGCCCACGGGCGTGCCTCTGCTCGCCGACGACGCACGCCGGGTCGTTCCGGTGCAGGCTCCACCGCGGCGGCGCCGGCG
T------CGGCCTCCACGAGATGGGCAAGAAGAGCAGCCCTGGCGCGTGACGCGCGCGCCCACCCGTCCGCACGTTCTTG
TTTCTGT-----TTTGCTGGATGGGTGGTGTGCAGTGCATGGGAAGGGAAAATA--TTTTTTTTCTCTCCTTCTTTTTGG
ATCCTCTGTTTGCGTCGACGGGGAACTTCATCTTGTCATCTGCAGTCGACGATTACGAATGTTGATCGATTCTGTGCCTG
ATGGAAACCGGCCGCCTGTATATATAACAAAGTGTACATAACTGCCGGTTCAGAAATGGGCAATTGCAGAGTTCTAGATC
AAAAGTTTTCCCTCAAAAAAAATC----------AAAAGTTTCAGAATATTTTTATACGCCTTGAAGAAAAAAGATTAAA
GTGTTGACAGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTTAATCTGGCGCCTTAGACCAACTCGGCCATATCA
ACTTGGTGGC-AACAATCCTCCTGCAGAGATCACGAACGCTTTCTACCATCATCCTTCTTAACTAATACCGCTTTCTAAA
ACATTTTCTGAAC-TGTCTCTCAATTTCATTCTAATTTGAAATGCCACTGGGTATTGGCTAATTA--TAGTATTGGGACT
AAGCATCATGTAAAAAACCAACATGGCGCACAGCACCTGATAACTTGGCCACCTACCTCTGTGCAGTCTGATCATCTGAT
GATAACGAGCGAAACAGGCAGAGGTGACACTCTACAAATCCAGAGCATAGCAAAGAAAGTGGCAACCAACAACATGCTAC
GGAGCAGGCACACTATATTCAGATTTCGGAGCCACATAGTTGTGGATTATATCACTAGTACGTAATAATGGTCTTTAGGC
AACAGGATAAATAACACTGGTCTTTTCAGTAC---ACTAAAATGTACTCGG------GGTAGATGAAAATTGAAACATAC
ATGTATGCTAATGGTAGTTGAAAACTTGAAATGTGCCCTATCTCAAGAAAATGCATACCTACAAACATGTGTTTCCCAAA
AGGCTCGGAGCAATCATGTGAACATATAGCGAATTAAACCGTGCAT--AGCAACGAAGAAAAGGGTCGTCGATGGTAAGG
TCCAGTGCTTTCTGCAAGTTCCAAGCACCGTCCACTTTAGGCGACACCAGCAACACTTTAGAGGCCCATGCTCGAAACTG
AGGACACCCGAATCTGTCTATCATCTCATTCACCTCGACCGCTGAAGGAAAGTTTTCTTCAAGTGGCACAAGCAGCAAAG
ACTCCAGCTCCTGCGCATCACTGGCGATGAACTTGAGGAATTCAAACTCTTTCTGATTCCCGCGGAACTTGTGG
>chr7D_369
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-----------------CCTTCAGAGGGAGAAAGTTGTGGAAAGGCCATCAGTTTCATGTATAATTTGCCACTACTTTTT
ATGTGAAAATTATGCTAACAATCATAACAAATTGGAGATATTAAAAA--AAACTTAAGGCATCGTTAAAACCAGTGCAAC
AAAGGTGCTTCTAGTATACGCATATGAATGCAGATTTCCAAAAAAA----CAGAACAATTAGGTAGATTGTACCATAGGT
AGAAGACATAGAAGACAAAACTTATGGAGTAATC----------------------------------------------
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-------------------------------------------------------TACATTTGGATGACCCACACAAATG
TCGCAAAATCACTCTAAAAATAGTGTCCCCTTGACTCCTTATATTGGACTGTGCTCTGTCCATTTTGAATATGCATGGAT
ATGGATATATATCCGATCCATGAGTGGCGCCAACGAATTCGGGATAGGCGGTAAAAATAGCTG---GTGTGGCCGTTACG
TGGCTTTAAATAGACCAGTGCATGGATAAAGCACCCCCTTTTTTATCTCCCTCCCCGCTTTGTTACTGCTCACCACTACA
ACCCGTAGAGTAATTTAACTTAGGCTGATACAAGGATCCACAATTAACTGCACATTAGTCTTCCATTTCAGCAAAGGTAA
CTCGCATGATTCATTCTCCATGTGCGTCTTTCTTGTGTTCAGATTTTTTGGGAGGGTTTGGATGAGAGGTTTCTGGCTAG
ACGATGGCAGTAATTTGTTAA-CATTTCTAGTACGATGTTCGTTGTTTCACCGGTCCTTGGTTCTGATCAAACCTTCGTT
GGAATGGTAGAGGTCGATCGAGATTGCCGTCGTCGTCGCTCGGTCGATGGGGGGCAGCATGGAGGAGCAGCTGCAGACGC
CGGCGGCGGCGAATAAGATCGCGGTGCCGTTGAAGAAGCACCACCCCAACCTCCACATGGCCCACGCCGGCGCGGGCAAG
GGCGGCGGGAAGGCGCCGGCGGTGATGGTGACCACGCCCAAGGCGGCGTCGCAGGCGCCGAAGCACGCGCACCTGCTGGC
GAGCCCACGGGCGTGCCTCTGCTCGCCGACGACGCACGCCGGGTCGTTCCGGTGCAGGCTCCACCGCGGCGGCGTCGGCG
CCGGCGCCGGCCTCCACGAGATGGGCAAGAAGACCAGCCCCGGCGCGTGACGCGCGCGCCCACCCGTCCGCACGTTCTTG
TTTCTGTTTTGCTTTGCTGGATGGGTGGTGTGCA----------------------------------------------
--------------TCGACGGGGAAATTCATCTGGTTTTCTGCAGTCGACGATTATAAATGTTGATCGATTCTCTACCTG
ATGGAAACCGGCCACCTGTATATATAAGAAAGTGTACATAACTGCCGGTTCAGTAATGGGCAATTGCAGAGTTCTAGC--
---------------------------------AAAAAGTTTCAGAATATTTTTACACGTCTGGAAGAAAAAATG-TAAA
TTGTTCACAGTGGGATTTGAACCCACGCCCTTTCGCACCAGAGCCTTAATCTGGCGCCTTAGACCAACTCGGCCATATCA
ACTTGCTGGC-AAAAATCCTCCTGCAGAGATCAGAAACGCTTTCTACCATCATCCTTCTTAGTTAATACCCCTTTCTAAA
ACATTTTCTGAACCTGTCTCTCAATTTCATTCTAATTTGAAATCCCACTAGGTATTTACTAGCTAATTGGTATTGGAACA
AAGCATCGTGTAA--AACCAACATGGCGCACAGCACCTGATAACTTGGCCACCTAGCTCTGTGCAGTCTGATCATCTGAT
GATAACGAGCGAAACAGACAGAGGTGACA--CTACAAAACCAGAGCATAGCAAAGAAAGTGCCAACCAACAACATGCTAC
AGAGCAGGCACACTATATTCAGATTTCGGAGCCACATAGTTGCGGATTATATCACTAGTACGTAATACTGGTCTTTAGGC
AACAGGATAAATAACACTGGTCTTTTCAGTACTGCACTAAAATGTACTCAA------GGTAGATGAAAGCTGAAACATTC
ATGTATGCTAATGGTAGTTGAAAACTTGAAATGTGCCCTATCTCAAGAAAATGCATACCTACAAACATGTGTTTCCCAAA
AGGCTCAGATCAATCATGTGAACATATAGCGAATTAAACCGTGCGTTCAGCAACGAAGAAAAGGATCGTCAATGGTAAGG
TCCAGTGCTTTCTGCAAGTTCCAAGCACCGTCCACTTTAGGCTACACCAGCAACACTTTAGAGGCCCATGCTCGAAACTG
AGGACAGCCGGATCTGTCTATCATCTCATTCACCTCAACCGCTGAAGTAAAATTTTCATCGAGCGGCACAAGCAGCAAAG
ACTCAAGCTCCTGCGCATCCCCGGCGATGAACTTGAGGAATTCAAATTCTTTTTGATTCCCTCTGAACTTGTGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
--------SS-------------S----S------SS-------S--S------------S----------------S--
--------------------------------------S-----------------------------------------
----------------------S----S----------------------------------------------------
-----------------------------------------------SS-------------------------------
---S---------------------------------------------S------------------------------
----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------------------
-----------------------S-S------------------------------------------------------
---------------------------------S-------------------------------------------S--
-----------------S---------------------------S-----------------S----------------
---------------------------------S-----------------------------------S----------
-------------------------------------------------S-SS-------S---------------S---
----------------SSSS-------S---------S------------------------------------------
------------------------------------S---------------------------------------S---
-------------S------------------------------------------S-----------------------
-------------------------------------------------------S------------------------
------S-------------------------------------------------------------S-----------
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-----S------------------------------------S---------SSSS---S--------------------
-------S------------------------------------------------------------------------
------SSS-----S--------------------------------------SS-------------S--S-----SSS
-SS-SSSSSSSSSSS--S-S-SSSSSSSSSSSS----------S--------------------------------S--S
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-----S----S-----------S----------S-------------------------SS-------------------
---S---------------------------------------SS-----------------------------------
--------------S-------------------------------------------------------S---------
-SS-----S-------------------------------------------------S---------------------
--S----------------------------------------S-S--------------S------------------S
------S----------------------S---------------------SSSSSS-----S----------------S
--------------------------------S--S-S-------------------S------------------S---
---------------------------------S----------------------------------------------
--------------------------------------S---------------------------------S-------
--------S-S----------S--------------S--------------S-----S----S-----------------
----------S---------------------------------------------------------------
>forward_931
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-------------------------------TATTCGTGGACGGAGGGAGT-----------------------------
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>reverse_2055
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------------------------------------------------------GATGGGCAATTGCACAGCTC------
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>forward_932
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--------------------------------ATTCGTGGACGGAGGGAGTA----------------------------
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>reverse_2953
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------------------------------------------------------------------------TGAAACTG
AGGACACCTGCA--------------------------------------------------------------------
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