>input_sequence_63501
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-----------------------------------------------------------------------ACTTCGAGC
TCTTCACTTAGCGGAGCGACACTCACGTACGCGCCGGCCATG------GACGAGCTTCTCACCCCGTACGCCCCTTTCTT
CCCGTCATCGCCGCCTTCCCAGTTCTCCACCGCCGAGGGGCACCCCCACCAGGTCTTCGAGCTCGCCTCCTGCGAGGTCC
CCGAGCAATGGCTGGTCGGCGACACCGTCGTGCCGGCCAAGAGCGAGGACGGGGATCACGTGTGGCCTGCGGGGAGCTCC
TCGCTGTCCCCGGACTCCGAGTT---------GCCGGGGGAGAGCCTGCAGGCATCG---------------------AC
GACGAAGCGGCGTGGGCGGAAGCCCGGGCCGCGGCCTGAGGGGCCCGCCGTCAGCCACGTGGAGGCCGAGAGGCAGCGCC
GCGACAAGCTGAATCGCCGGTTCTGCGACCTGCGCGCCGCCGTGCCCAAGGTGTCCCGCATGGACAAGGCCTCCCTCCTC
GCCGACGCCGTCGCCTACATCACCGACCTGCGGTCCTGCGTCGCGCGGCTCGAGGAAGAGGGCCGGCAGGCGGCCGCCGC
GAGGTGGGAGGC------GTCGAACGCGTCCGCTTCTTCGTCCTGGGGCGGCCACGCCGGGGCCTCCCTGCACCAC---C
TGGCCGGCGACGACGTGGTGCAGGTGCGGATGGTGGGGAAGGACGCGGCGGCGGTGCGCGTGACGAGCTCGGGACGA---
GCCCCGCACGCGCCGGCGCGGCTGATGAGCGCGCTCCGGTCGCTAGAGCTGCAGGTGCAGCACGCGTGCGTGAACCGCGT
GCAGGGCGTGACGGTGCAGGACGTCGTCGTCGACGTGCCCGCGGCCCTACAGGACGACGACGGCGACGGCGCCCTCCGGT
CCGCGCTGCTCCAGAGGCTACGTTGCACCGCATAGTAGCGCTGCCTAAAGCCCTAGAGCAGCGCCGCCCTACGTTTTCGC
ACGTACGCACCCACCGTTGACCGTTCCGGAGTACTACAACGATTTATCTGCTGTCCT----GCTATTCTCCATGGAATAA
A-------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5D_1_TraesCS5D01G313700
GCTCGAAAACACTTTAAAACCCCATGGTCAGCAACTCTATTT--AGTCTTCATGCAAATTCTCAGGCATAATAAGAAGAG
TGCTTGTATGTGATAACGCCTCTCAAAGAACATTTCTTCACATAAACAAACTTCACTCGGAGAAGAAACGAATAGGAAAT
CAAGTTAATACATGTGTGCATGCGAAATTAACATATTTTTGTCATTATTAATTACTTGTTTTCTATGTGTATATATGTCA
ATTGTAGTTTATTTATCACTACAACATACTTGTGTACGCTCTCACTTAATTTGGTCTTCGATATCTAC-AATTAAGTTAT
ATATGCGAAAACACTCTTATAAAGG-ACTGGCTAGGGGTCAGTTGCTTGAAAACAGTTTTGTGCCCAATCGATTTTTGCT
GTTCTATCTAAACTATTGCAACAAGATTCAATGGATCTTGCACCGTCTTCTAGCTCGGACCAGCATGCGTTGTTCCTCTT
-TTCCTTTGACAGCTGTCGATCCAGCCCAGGCCAAACCACTTGCCTCCACTGTCTGCAGTCAGCTACACTCTCGCAACCA
CCTCACCACCCAGTCCCCCCATCGACTTCCCTCACCGCGGTGCTTGCCGCCGCCCCCGGTCATCCCTCTAAACCAGCGAA
CCTACACCCCCCTCCCTTCCTCTCACCCCGAACCGTCAAGTTTCGAACTCACCTCTGCCGACTATGGCTCATTCTTGGCC
GAGGCCTTGCCCGCGTCGCGAGCTTCCTTCTCACCCAATT-GACTGACCCAAATTCAAAATCCGCT--------------
--AAACTGTC----TTATAAATGACTACGTCTCTACGTCTTCTAGTAGTTAGCTAGCGA---CAAACTTCCAATCCGAAA
CTAACGGACATGTTTTTGGCGGGAGGAATACAAATCGAAAGCGGCATCTACACCTTTAACGTGACACGTCATTTAAGCGA
GGTCTTCACCGCAAATGTGTCACAAC-TCACCAGTACAAAAGACGCCCACA-CTCCCTTCGCTAACTTCCCACTTCGAGC
TCTTCACTTAGCGGAGCGACACTCACGTACGCGCCGGCCATG------GACGAGCTTCTCACCCCGTACGCCCCTTTCTT
CCCGTCATCGCCGCCTTCCCAGTTCTCCACCGCCGAGGGGCACCCCCACCAGGTCTTCGAGCTCGCCTCCTGCGAGGTCC
CCGAGCAATGGCTGGTCGGCGACACCGTCGTGCCGGCCAAGAGCGAGGACGGGGATCACGTGTGGCCTGCGGGGAGCTCC
TCGCTGTCCCCGGACTCCGAGTT---------GCCGGGGGAGAGCCTGCAGGCATCG---------------------AC
GACGAAGCGGCGTGGGCGGAAGCCCGGGCCGCGGCCTGAGGGGCCCGCCGTCAGCCACGTGGAGGCCGAGAGGCAGCGCC
GCGACAAGCTGAATCGCCGGTTCTGCGACCTGCGCGCCGCCGTGCCCAAGGTGTCCCGCATGGACAAGGCCTCCCTCCTC
GCCGACGCCGTCGCCTACATCACCGACCTGCGGTCCTGCGTCGCGCGGCTCGAGGAAGAGGGCCGGCAGGCGGCCGCCGC
GAGGTGGGAGGC------GTCGAACGCGTCCGCTTCTTCGTCCTGGGGCGGCCACGCCGGGGCCTCCCTGCACCAC---C
TGGCCGGCGACGACGTGGTGCAGGTGCGGATGGTGGGGAAGGACGCGGCGGCGGTGCGCGTGACGAGCTCGGGACGA---
GCCCCGCACGCGCCGGCGCGGCTGATGAGCGCGCTCCGGTCGCTAGAGCTGCAGGTGCAGCACGCGTGCGTGAACCGCGT
GCAGGGCGTGACGGTGCAGGACGTCGTCGTCGACGTGCCCGCGGCCCTACAGGACGACGACGGCGACGGCGCCCTCCGGT
CCGCGCTGCTCCAGAGGCTACGTTGCACCGCATAGTAGCGCTGCCTAAAGCCCTAGAGCAGCGCCGCCCTACGTTTTCGC
ACGTACGCACCCACCGTTGACCGTTCCGGAGTACTACAACGATTTATCTGCTGTCCT----GCTATTCTCCATGGAATAA
ATCAAGCGACGATGTATTCATACTAATACTAGCCCCATAGTTATCACGGAATATCGCTGAACGAGCCTCTAGTTGTTAGG
TGATTTCGTCAATCTCAAGACTTATCGAGCAATACCTCAAATATGTTCGTAGAATATGTGTGTTCATAAGGGTGAATAGA
TCGTGATGCATGAGGGTATGCATTTATACTACCTGTGTTTCTAAAAAACAAATGTAATGTGGTGTGTGTTTGAAGAGGAC
AGAGTATAAACAAAGATAGTACTATTCACTTACAAGTCAAGTAAAGACCGTATTCCTTGTGTACAAGATAGGATCACAAA
TGATATCTCCACTAGTGCAGAACCGGGCTTTAGCACCAGTTCGTAAGAGCCTTTAGTGCTGGTTCTGTAACCGGCACTAA
A-GGTGGGGACTAAAGGTCC---CC----CCT--TTAGTACCGGTTCAGCATGAACCGCCACTAAAGTGCCACCACGTGG
CACGAGCCAGGGCCGGGGACGGGGAGACCTTTAGTACCGGTTGGTAACACCAACCGGTACTAAAGGTTTGG-GGGTTTTG
GTTTTATTTTT-ATTTTTTCTTTAATTTTGTGTTTTCAATTTAATTTAGAGATTGTTTTTACATTATAATGAGTTGTTAA
ATCACTAGGTGAAAGTATCGCGGATTAGTTTG-AAGTGGATATGGATCGTCCT----AAGTGATCAAGTA---TAATATG
GATATGATATA-TACTTGATCACT-------TAGCTAGGATCCAT----CTAGTTGAAACTAATCCGCGGTT--------
-------------------TC-----------------------------------------ATCATCATATTAATATAA
AAACTCTTGCATCATATCATCACCAACAACAGT-TACTAGCTAGCTAATAATCATCATAATCGTCATTACCACTA----T
TTAATCATCATAGTCATTACTGCTATTTAATCACCACCAACACTAGCTTAAAGAAGAAACATTCACTTGTACCAGAAGCA
AAGATATCATCGAGTTCAACATGGTCATGAGATTATAAGCGTTCATAAGACC----ACAAAAGTAAATCA
>chr5A_1
GCTCGAAAATACTTGAAAACCCCATGGTCAGCAACTCTATTTAGAGTGTTCATGCAAATTCTCACGCATAATAGCAAGAG
TGCTTGTATGTGCTAACGCCTCTCAAAGAACATTTCTTCACATAAACAGACTTCACTCGGAGAAGAGTCGAACGGGAAAT
CAAGTTAATACATGAGTGCATGTGAAATTAACATATTTTTGTCATTACTAATTACTTGTTTTGTATGTGTATATATGTTA
ATTGTAGTTTATTTATCACTA--ACATACTTGTGTGTGCTCTCACTTAATTTGGTTTTCGATATTTACAAATTAAGTTAT
ATATGCAAAAACACTCTTACAAAGGGACTGGCTAGGGGTCAGTCGCTTAAAAACAGTTTTGTGCCCAATCAATTTTTGTT
GTTCTATCTAAACAGTTCCAACAAGATCCAATGGATCTTGCACCGTCTTCTAGCTCGGACTAGTATGCATTGTTCCTCTT
-TTCCTCTGACAGCTACTGATCCAGCCCAGGCCAAACCACTCGCCTCGACCGTTTGCGGTCGGCTACACTCTCATGCCGA
CCTCACCGCCCTATCCTCCTATCGGCCTGTCTCACCGCAGTGCCTGCCGTCGCCCCCGG------CTCTAAACCAGCGAA
CCAGCACCCCCTATCCCCT---TCACCCCGAACCGTCAAGTGCCGAACTCACCTCCGCCTACTACGGCTCATTCCTGGCC
AAGGCCTTGCCGGCGTCGTGTGCTTCCTTCTCACCCACTCAGACTGACCCAAATTCAAAATCCACGCAACTTACTTCAAG
GAAAACTTTTTCTTTTATAAATGACTATGTCTG-----------CTAGTTAGCTAGCGA---CAGACTTCCAATCCGAAA
CTAACGGACATGTTTTTCGCGGGAGGAATGCAAATCGGAAAGGGCATCT--ACCTTTAAGGCGACACATCATTTAAGCGA
GGTCTTAACCGCAAATGTGTCACCACTTCACCAGTACAAAAGACGCCCACA-C-CCCTTGGCTAATTTCCCACTTCGAGC
TCTTCACTTAGCGGAGCGACACTCACGTACGCGCCGGCCATG------GACGAACTTCTCTCCCCGTACGCCCCATTCTT
CCCGTCATCGCCGCCTTCCCAGTTCTCCGCCGCCGAGGGGCACCACCACCAGGTCTTCGAGCTCGCCTCCTGCGAGGTCC
CCGAGCAATGGCTGGTCGGCGACACCGTCGTGCCGGCCAAGAGCGAGGACGGAGATTGCGTGTGGCCTGCGGGGAGCTCC
TCGCTGTCGCCGGACTCCGAGCT---------TCCGGGGGAGAGCCTCGAGGCATCG---------------------AC
GACGAAGCGGCGTGGGCGGAAGCCCGGGCCGCGGCCTGAGGGGCCCACCGTCAGCCACGTGGAGGCCGAGAGGCAGCGCC
GTGACAAGCTGAATCGTCGGTTCTGCGACCTCCGCGCCGCCGTGCCCAGGGTGTCCCGCATGGACAAGGCTTCCCTCCTC
GCCGACGCCGTAGCCTACATCACCGACCTGCGGTCCTGCGTCGCGCGGCTCGAGGAAGAGGGCCGGCAGGCGGCGGCCGC
GAGGTGGGAGAC------GGCGAACGCGTCCGCTTCTTCGTCCCGAAGCGGCCACTCCGGGGCCTCCCTGCATCAC---C
TGGCCGGCGACGACGTGGTGGAGGTGCGGATGGTGGGGAAGGACGCGGCGGCTGTGCGCGTGATGAGCTCGGGACGA---
GCCCCGCACGCGCCGGCGCGGCTGATGAGCGCGCTCCGGTCCCTAGAGCTGCAGGTGCAGCACGCGTGCGTGAACCGCGT
GGAGGGCGTGACCGTGCAGGACGTCGTCGTCGACGTGCCCGCTGCTCTACAGGACGACGACGGCGACGGCGTCCTCCGGT
CCGCGCTGCTCCAGAGGCTATG-----------------------TAGAG-CCTAGAGCAGCGCTGCCCTACGTTTTCGC
ACGTACGCACCCACCGTTGACCGTTCCGGAGTACTACAACGGTTTATCTGCTGCCCTGCTAGCTATTCTCCATGGAATAA
ACGAGACGACGAATGTATT-------------------------------------------------------------
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>chr5A_422
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-------------------------ATCCAACGGATCCTGCATCGTCTTTCAGCTTGAACCAGTATGCATTGTTCCTCTT
CTTCCTCTAACAACCGCCAATCCAGCCCCGGTTGAACCGCCTGCCTCCACCGTATGGGGCCGGCCACACTCCCACGACCA
CTGCATCGCCACACCCTCCCATCGACCTCCCACATTGCAGTGTTTGCCGTCGCCCCAGC-CATCCCTCTAAACCGAGGAA
CCTACATCTCCCCCACCTCCAATA----------GTCAAGTTTCAAACTCGACTCCGTCGGCTACGGCCTGTTCCTGTCC
GAGGACTTGCCGACGTCGTCTGCTTCCTTCTCACCCCAGTCGGCCGGCCCAATTT---------CGAAATTCACTTCCAG
AAAAACTGTC----TTACAAATTACTACGTCTT-----------GTAGTTAGCTATTGGTTCCAAACTTCCGATCCTAAA
TTAGCGGACATGTATTCTGCGGGAGGAATTCAAATTGAAAAGGACAGGT--ACCTTTAACGTGATACGCCATTTAAGCGA
GGTCTTAACCGCAAATGTA--------TCACCAGTACAAAACACGGCTGCAGC-CCCTGCGCTAATTCACCACTTCGACC
TCTTCACTTAGCGGAGCGACACGCACGTCCGCGACGGCCATG------GACGAGCTTCTATCCCCGTACTCCCCTTTCTT
CCCGTCATCGCCGCCTTCTCTGTTCTCCACCGCCGAGGGGCACCACCACCAGGCCTTCGAGCTCGCCTCCTGCGAGGTCC
CCGAGCAATGGCTGGTCCGCGACACCGTCGTGCCGGCCAAGAGCGAGGACGGAGATTACGTGTGGCCTGCTGGGAGCTCC
TCGGTGTCCCCCGACTCCGAGTT---------GCCGGGGGAGAGCCTGCAGGCATCG---------------------AC
GACGAAGCGGCGTGGGCGGAAGCCCGGGCCGCGGCCTGAGGGGCCCACCCTCAGCCACGTGGAGGCCGAGAGGCAGCGCC
GCGACAAGCTGAATCGCCTGTTCTGCGACCTCCGCGCCGCCGTGCCCAGGGTGTCCCGCATGGACAAGGCTTCCCTCCTC
GCCGACGCCGTAGCTTACATCACCGACCTGCGGTCCTGCGTCGCGCGGCTCGAGGAAGAGGGCCGGCAGGCGGCCGCCGG
GAGGTGGGAGGC------GTCGAACGCGTCCGCTTCTTCGTCCTGGGGCGGCCACGCCGGGGCCTCCCTGCACCAC---T
TGACCGGCGAGGATGTGGTCGAGGTGCGGATGGTGGGGAAGGACGCGGCGGCAGTGCGCGTGATGAGCTCGGGACAA---
GGCCCACACGCGCCGGCGCGGCTGATGAGTGCGCTCAGGTCGCTAGAGCTGCAGGTGCAGCACGCGTGCGTCAACCGCGT
GGAGGGCGTGACCGTGCAGGACGTCGTCGTCGACGTGCCCGCTGCCCTACAGGACAACGACGGCGACGGCGTCCTCCGGT
CCGCGCTGCTCCAGAGGCTACGTTACAACGCGTAGTAGCGCTAGCTAGAG-CCTAGAGCAGCGCTGCCCTACGTTTTCGC
ACGTACGCATCCACCGTTGACTATTCCGCAGTACTACAACGTTTTATCTGCTTTCCT----GCTATTCTCCATGGAATAA
ATCGAACGACGAGTGTATT-------------------------------------------------------------
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>chr5B_834
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--------------------------------------------------------------CAAACTTCCAATGCGAAA
CTAACGGACATGTTTTTGGCGGGAGGAACACAAATCGAAAACGGCATCT--ACCTTTAACGTGGCACATCATTTAAGCGA
GGTCTTAACCGCAAATGTGTCACAAC-TCACCAGTACAAAAGACACCCACA-C-CCCTTCGCTAATTT-CCACTTCGAGC
TCTTCACTTAGCGGAGCAACACACACGTACGCGCCGGGCATG------GACGAGCTTCTCTCCCCGTACGCCCCTTTCTT
CCCGTCATCGCCGCCATCCCAGTTCTCCACCGCCGAGGGGCACCACCACCATGTCTTCGAGCTCGCCTCCTGCGAGGTCC
CCGAGCAATGGCTAGTCGGCGACACCGTCGTGCCGGCCAAGAGCGAGCACGGAGATTATGTGTGGCCTGCGGGGAGCTCC
TCGCTGTCCCCGGACT------T---------GCCGGGGGACAGCCTGCAGCCATCG---------------------AC
GACGAAGCGGCGTGGGCGGAAGCCCGGGCCGCGGCCTGATGGGCCCGCCGTCAGCCACGTGGAGGCCGAGAGGCAGCGCC
GCGACAAGCTGAATCGCCGGTTCTGCGACCTGCGTGCCGCCGTGCCCAACGTGTCCCGCATGGACAAGGCCTCCCTCCTC
GCCGACGCCGTCGCCTACATCACCGACCTGCGGTCCCGCGTCGCGCGACTGGAGGTAGAGGGCCGGCAGGCGGCCGCCGC
GAGGTGCGAGGC------GTGGAACGCGTCTGCTTCTTCGTCCTGGGGTGGCCACGCCGGGGCCTCCCTGCACCAC---G
TGGCCGCCGACGATGTGGTGGAGGTGCGGATGGTGGGGAAGGACGCGGCGGCAGTGCGCATGATGAGCCCGGGACAA---
GCCCCGCACGCGCCAGCGCGGCTGATGAGTGCGCTCCGGTCGCTAGAGCTGCAGGTACAGCACGCGTGCGTGAACCGCGT
GGAGGGCGTGACGGTGCAGGACGTCGTCGTCGACGTGCCCGCTGCCCTACAGGACGACGACGGCGACGGCGCCCTCCGGT
CCGCGCTGCTCCAGAGGCTACGTTACACCGCCTAGTAGCGCTACCTAGAG-CCTAGAGCAGCGCCGGCCTACGCTTTCGC
ACGTACGCACCCACCGTTGACCGTTCCGGAGTACTATAACG---------------------------------------
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>chr5D_1022
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------------GGAGCGACACGCACGCACGTCGCGCCGGCTATGGACGACGAGCTGCTCTCCCCGTGCTCCTCCTTCTT
CCCGGTCTCGCCGCCGTCCGGGCAGTT------CGAGCACCACCACCACCAGTTCATCGAGTTCACCTCCTGCGAGGTCC
CCGAGCAATGGCTGCTCGGCGACGTCGTCGTCCCGGCCAAGAGCGAGGACGCGGGGGACCTGTGGCCCGCGGGG---TCC
CTGCTGTCCCCGGACTCCGAGCTCTCGGAGCTGCCGGCGGTGAGCCTCCCTGCCTCCACGGAGTCGACGCCGCGGCCGGC
GGCCAAGCGGCGTGGGAGGAAGCCCGGGCCACGCCCCGAGGGCCCCACTGTCAGCCACGTGGAGGCCGAGCGGCAGCGCC
GCGACAAACTGAACCGCCGCTTCTGCGACCTCCGCGCTGCCGTCCCCACCGTGTCCCGCATGGACAAGGCCTCCCTCCTC
GCCGACGCCGCCGCATACATTGCCGAGCTGCGCGCCCGTGTGGCCCGGCTCGAGGACGAGAGCAAGCAGGCGGCCGCCGC
GAGGTGGGACACTAAC------------------TCGGCGTCCCGCAGCGGTGGCGGCGC---CTCCTTGCAGCACTTTC
TAGCCGGCGACGAGACGGTGGAGGTGCGGATGGTGGGGCGAGACGCCGCCGCAGTGCGCGTGACCACGGCCGCGGGGTCC
GCTCCGTACGCGCCGGCGAGGCTGATGAGCGCGCTCCGCTCGCTTGAGCTGCAGGTGCAGCACGCGTGCGTGAGCCGCGT
GCAGGGCGCGACGGTGCAGGACGTCGTGGTGGACGTGCCCACCGCGCTGCAGCATGATGA---CGGCGCCGCCCTCCGCT
CCGCGCTGCTCCAGCGGCTACG----------------------------------------------------------
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>chr5B_1022
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------------GGAGCGACACGCACGCACCTCCCGCCGGCTATGGACGACGAGCTGCTCTCCCCGTGCTCCTCCTTCTT
CCCGGTCTCGCCGCCGTCCGGCCAGTA------CGAGCACCCCCACCACCAGTTTATCGAGTTCGCCTCCTGCGAGGTCC
CCGAGCAATGGCTGCTCCGCGACGTCGTCGTGCCGGCCAAGAGCGAGGACGCGGGGGACCTGTGGCCCGCGGGG---TCC
CTGCTGTCCACGGACTCCGAGCTCTCGGAGCTGCCGGCGGCGAGCCTCCCTGCCTCCACGGAGTCGACGCCGCGGCCGGC
GCCCAAGCGGCGTGGCAGGAAGCCCGGGCCACGCCCCGAGGGCCCCACTGTCAGCCACGTGGAGGCCGAGCGGCAGCGCC
GCGACAAACTGAACCGCCGCTTCTGCGACCTCCGCGCTGCCGTCCCCACCGTGTCCCGCATGGACAAGGCCTCCCTCCTC
GCCGACGCCGCCGCATACATCGCCGAGCTGCGCGCCCGCGTTGCCCGGCTCGAGGACGAGAGCAAGCAGGCGGCCGCCGC
GAGGTGGGACACTAAC------------------TCGGCCTCCCTCGGCGGTGGCGGCGC---CTCCTTCCAGCACTTTC
TAGCAGGAGACGAGACGGTGGAAGTGCGGATGGTGGGGCGGGACGCGGCGGCGGTGCGCGTGACCACGGCCGCGGGGTCC
GCCCCGCACGCGCCGGCGCGGCTGATGAGCGCGCTCCGGTCGCTGGAGCTGCAGGTGCAGCACGCGTGCGTGAGCCGCGT
GCAGGGCGCGACGGTGCAGGACGTCGTGGTGGACGTGCCGGCCGCGCTGCAGCACGATGA---CGGCGCCGCCATCCGCT
CCGCGCTGCTTCAGCGGCTACG----------------------------------------------------------
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>chr5D_1024
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--------------AGCGACACGCACGCACGTCCCGCCGGCCATGGACGACGAGCTGCTCTCCCCGTGCTCCTCCTTCTT
CCCGGTCTCGCCGCCGTCCGGGCAGTT------CGAGCACCATCACCACCAGTTTATCGAGTTCGCCTCCTGCGAGGTCC
CCGAGCAATGGCTGCTCGGCGACGTCGTCGTGCCGGCCAAGAGCGAGGACGCGGGGGACCTGTGGCCCGAGGGG---TCC
CTGCTGTCCACGGACTCCGAGCTCTCGGAGCTGCCGGCGGCGAGCCTCCCTGCCTCCACTGAGTCGACACCGCGGCCGGC
GGCCAAGCGGCGTGGGAGGAAGCCCAGGCCACGCCCCGAGGGCCCCACTGTCAGCCACGTGGAGGCGGAGCGGCAGCGCC
GCGACAAACTGAACCGCCGCTTCTGCGACCTCCGCGCTGCCGTGCCCACCGTGTCCCGCATGGACAAGGCCTCCCTCCTC
GCCGACGCCGCCGCATACATCGCCGAGCTGCGCGCCCGTGTGGCCCGGCTCGAGGACGAGAGCAAGCAGGCGGCCGCCGC
GAGGTGGGACACTAAC------------------TCGGCGTCCCGCAGCGGTGGCGGCGC---CTCCTTGCAGCACTTTC
TAGCCGGCGACGAGACGGTGGAGGTGCGAATGGTGGGACGGGACGCGGCGGCGCTGCGCGTGACGACGGCAGCGGGGTCC
GCTCCGTACGCGCCGGCGAGGCTGATGAGCGCGCTCCGCTCGCTTGAGCTGCAGGTGCAGCACGCGTGCGTGAGCCGCGT
GCAGGGCGCGACGGTGCAGGACGTCGTGGTGGACGTGCCCGCCGCGCTGCAGCACGATGA---CAGCGCCGCCCTCCGCT
CCGCGCTGGTCCAGCGGCTACG----------------------------------------------------------
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>chr5D_1049
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---------------------------------------ATG------GACGAGCTGCTCTCCCCGTGCTCATCCTTCTT
GCCACCACCGCCGCCTCCCCAGCTCGCCACTGCGGACGAGAACCACCATGAGGTCCTCGAGTTTACCTCCTGCGAGGTCC
CCGAGCAATGGCTGCTCGGCGACGTCGTCGCGGCGGCCAAGAGCGAGGAGGGAGACTACTTGGGGCCTGAGGGGAGCTCC
TCGCTCTCCCCGGACACCGAGCT---------GCCGCCGGCGAGCCTACAGGCTTCA---------------------GC
GAAGAAGCGGCGTGGGCGGAAGCCGGGGCCGCGGCCGGAGGGCCCCACCCCCAGCCACGTCGAGGCCGAGCGGCAGCGCC
GCGAAAAGCTGAACCGCCGGTTCTGCGATCTCCGCGCCGCCGTGCCTACCGTGTCTCGCATGGACAGGACCTCCCTCCTC
GCCGACGCCGCCGCCTACATAGCCGAGCTACGCTCCCGCGTCGCGCAGCTCGAGGACGAGGGTCGGCAGGCGGCCGCCTC
GAGATGGGACTGGGAGGTGTCGAACGCATCGGCTTCTTCGTCCCGAAGCGGCCACGCCGG---CTCCATGCACCAC---C
CGGCCTGCGACGATGTGGTGGAGGTGCGGATGGTGGGGAAGGATGCAGCGGCGGTGCGCGTAACGAGCGCGGGAGGA---
GCCCCACACGCGCCGGCGCGGCTGATGGGCGCGCTCAGGTCGCTAGAGCTGCAGGTGCAGCACGCGTGCGTGAACTGCGT
GGAGGGCGTGACGGTGCAGGACGTCGTCGTCGACGTGCCCGCTGCGCTCCAGGACGACGG---CG---------------
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>chr5A_1129
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---------------------------------------------CCACCAGTTTATCGAGTTCGCCTCCTGCGAGGTCC
CGGAGCAATGGCTTCTCGGAGACGTCGTCGTGCCGGCCAAGAGCGAGGACGCGGGGGACCTGTGGCCCGCGGGG---TCC
CTGCTGTCGCCGGACTCCGATCTCTCCGAGCTGCCGGCGCCGAGCCTCCCTGCATCCACGGAGTCGACGCCACGTCCGGC
GGCGAAGCGGCGGGGGAGGAAGCCGGGGCCCCGCCCCGAGGGCCCCACCGTCAGCCACGTGGAGGCGGAGCAGCAGCGCC
GCGACAAGCTGAACCGCCGCTTCTGCGACCTCCGCGCCGCCGTGCCCACCGTATCACGCATGGACAAGGCCTCCCTGCTC
GCCGACGCCGCCGCATACATCGCGGAGCTGCGCGCCCGCGTGGCCCGGCTCGAGGACGAGAGCAAGCAGGCGGCCGCCGC
GAGGTGGGACACTAAC------------------TCGGCCTCCCTTGGCGGTGGCGGCGC---CTCCTTCCAGAACTTTC
TAGCCGGTGACGAGACGGTGGAGGTGCGGATGGTGGGGCGAGACGCCGCCGCAGTGCGCGTGACAACGGCCGCGGGGTCC
GCCCCTCACGCGCCGGCGCGGCTGATGAGCGCGCTCCGGTCGCTGGAGCTGCAGGTGCAGCACGCGTGCGTGAGCCGCGT
GCAGGGCGCGACAGTGCTGGACGTCGTGGTGGACGTGCCCGCCGCGCTGCAGCCCGATGA---CGGCGCCGCCCTCCGCT
CCGCGCTGCGCCAGCGGCTACG----------------------------------------------------------
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>chr5A_1298
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----AAGCGGCGTGGGAGGAAGCCCGGGCCACGCCCCGAGGGCCCCACTGTCAGCCACGTTGAGGCCGAGCGGCAGCGCC
GCGACAAACTGAACCGCCGGTTCTGCGACCTGCGCGCTGCAGTCCCCACCGTGTCCCGCATGGACAAGGCCTCCCTCCTC
GCCGACGCCGCCGCATACATCGCCGAGCTGCGCGCCCGTGTGGCCCGGCTCGAGGACGAGAGCAAGCAGGCGGCCGCCGC
GAGGTGGGACACTAAC------------------TCGGCCTCCCTTGGCGGTGGCGGCGC---CTCCTTCCAGAACTTTC
TAGCAGGTGACGAGACGGTGGAGGTGCGGATGGTGGGGCGAGACGCCGCCGCAGTGCGCGTGGCCACGGCCGCGGGGTCC
GCCCCGCACGCGCCGGCGCGGCTGATGAGCGCGCTCCGGTCGCTGGAGCTGCAGGTGCAGCACGCGTGCGTGAGCCGCGT
GCAGGGCGCGACGGTGCAGGACGTCGTCGTGGACGTGCCAGCCGCGCTGCAGCACAACGA---CGGCGCCGCCCTCCGCT
CCGCACTACTCCAGCGGCTACG----------------------------------------------------------
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>chr5A_2327
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---------CACTAGTGCAGAACCGGGCTTTAGCACCGGTTCGTAAGGGACTTTAGTGTCGGTTCTGTAACCGGCACTAA
AGGGTGGGGACTAAAGGTCCGCCCC----CCT--TTAGTACCGGTTCAGCACGAACCGTCACTAAAGGGCCACCACGTGG
CATGAGCCAGGGCCGGGGGTGTGGAGACCTTTAGTACCGGTTGGTAACACCAACTGATACTAAAGGTTGGG-GGGTTTTG
GTTTTATTTTTTATTTTTCCTTTAATTTTGTGTTTTCCATTTAATTTAGAGATTGTTTTTACATTATAATGAGTTGTTAA
ATCACTAGGTGAAAGTACCGTGGATTAGTTTG-AAGTGGATATGGATCGTCCTAGCTAAGTGATCAAGTAATAT-----G
GATATGACATATTACTTGATCACT-------TAGTTAGGATATCCATCCCTAGTTGAAACTAATCCGCGGTT--------
-------------------TCTTTCATAAATGATATAATAAC---TC---------------ATCATCATATTAATATAA
AAGCTCTTGCATCATATGATCACCAACAAC-----ACTAGCTAGCTAATAATCATCATAGTCGTCATTACCGCTA----T
TTAATCATCATAGTCATTACCGCTATCTAATCACCACCAACACTAGCTTAAAGAAGAAACATTCACTTGTACCAGAAGCA
AAGATATCATCGAGTTTAACATGGTCAT------------------------------------------
>chr7B_2327
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---------CACTAGTGCAGAACCGGGCTTTAGCACCGGTTCGTAAGGGCCTTTAGTGTCGGTTTTGTAACCGGCACTAA
AGGGTGGGGACTAAAGGTCC---CC----CCT--TTAGTACTGGTTCAGCACGAACCGCCACTAAAGTGCCACCACGTGG
CACGAGCCAGTGCCAGAGGCGGGGAGACCTTTAGTACCGGTTGGTAACACCAACCGGTACTAAAGGTTTGG-GGTTTTTG
GTTTT-ATTTTTATTTTTCCTTTAATTTTGTGTTTTCAATTTAATTTAGATATTGTTTTTACATTATAATGAGTTGTTAA
ATCACTAGGTGAAAGTACCGCGGATTAATTTGAAAGTGGATATGGATCGTCCT----AAGTGATCAAGTAATATAATATG
GATATGGCGTA-TACTTGATCACT-------TAGCTAGGATCCAT----CCAGTTGAAACTAATCCGCGGTCTTTCATAA
ATGATATAATAACTCATCATC-----------------------------------------ATCATCATATTAATATAA
AAACTCTTGCATCATATCATCACCAACAACAG--TACTAGCTAGCTAATAATCATCATAGTCGTCATTACCACTAGCTAT
TTAATCATCATAGTCATTACCGATATTTAATCACCACCAACACTAGCTTAAAGAAGAAACATTCACTTGTACCAGAAGCA
AAGATATCATCGAGTTCAAAATGGTCATGAGATTATAAGCGTTCATAAGACC----ACAAAAGCAAATCA
>chr3D_2327
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---------CACTAGTGCAGAACCGGGCTATAGCACCGGTTCGTAAGGCCCTTTAGTGCCGGTTCTGTAACCGGCACTAA
AGGGTGGGGACTAAAGGTCC---CC----C-T--TTAGTACCGATTCTGCACGAACCGCCGCTAAAGGGCCACCATGTGG
CACGAGCCAAGGCCGGGGGCGGGGAGACCTTTAGTACCGGTTTGTAACACCAACCGGTACTAAAGGTTGGG-GGG-TTTG
GTTTTATTTTTTATTTTTCCTTTAATTTTGTGTTTTCCATTTAATTTAGAGATTGTTTTGACATTATAATGAGTTGTTAA
ATCACTAGGTGAAAGTACCGCGGATTAGTTTG-AAGTGCATATGGATCGTCCT----AAGTGATCAAGTAATAT-----G
GATATGGCATATTACTTGATCATCACTTAGCTAGCTAGGATCCAT----CCAGTTGAAACTAATCCGCGGTT--------
-------------------TCTTTCATAAATGATATAATAAC---TT---------------ATCATCATATTAATATAA
AAACTCTTGCAT---ATCATCACCAACAAC-----ATTAGCTAGCTAATAATCATCATAGTCGTCATTACCACTA----T
TTAATCATCATAGTCATTACCGCTATCTAATCACCACCAACACCAGCTTAAAAAAGAAACATTCACTTGTACCAGAAGCA
AAGATATCATCGAGTTCAACATGGTCATGAGATTATAAGTGTTCATAAGACCGGCCACAAAAGCAAATCA
>chr3D_2327
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---------CACTAGTGCAGAACCGGGCTTTAGCACCGGTTCGTAAGGGCCTTTAGTGCCGGTTCTGTAACCGGCACTAA
AGGGTTGGGACTAAAGGTCC---CCTCCCCCT--TTAGTACCGGTTCAGCATGAACCGCCACGAAAGTGCCACCACGTGG
CACGAGCCAGGGCCAGGGGTGGGGAGACCTGTAGTACCCGTTGGTAACACCAACCGGTACTAAAGGTTTGGGGGGTTTTG
GTTTTATTTTTTATTTTTCCTTTAATTTTGTGTTTTCAATTTAATTTAGAGATTGTTTTTACATTATAATGAGTTGTTAA
ATCACTAGGTGAAAGTACCGCGGATTAGTTTG-AAGTGGATATGGATCGTCCT----AAGTGATCAAGTAATAT-----G
GATATGGAATAT-AATTGATCACT-------AAGCTAGGATCCAT----CTAGTTGAAACGAATCTGCGGTT--------
-------------------TCTTTCATAAAT--TATAATAAC---TCATCATCATCATCATCATCATCATATTAATATAA
AAACTCTTGCATCATATCATCACCAACAATAG--TACTAGCTAGCTAATAATCATCATAGTCGTCATTACCACTA----T
TTAATCATCATAGTCATTACCGCTATCTAATCACCACCAACACTAGCTTAAAGAAGAAACATTCACTTGTACCAGAAGCA
AAGATATCATCGAGTTCAACATGGTCATGAGATTATAAGCGTTCATAAGACC----ACAAAAGCAAATCA
>chr2A_2327
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---------CACTAGTGCAGAACCAGGCTTTAGCACCGGTTTGTAAGGGACTTTAGTGCCGGTTCTGTAACCGTCACTAA
AGGGTGGGGACTAAAGGTCC---CC----CCC--TTAGTACCGGTTCAGCACGAACCACCACTAAAGGGCCACCACGTGG
CATGAGCCAGGGCCGGGGGCGTGGAGACCTTTAGTACCGGTTGGTAACACCAACCGATACTAAAGGTTGGG-AGTT-TTG
GTTTT-ATTTTTATTTTTCCTTTAATTTTGTGTTTTCCATTTAATTTAGAGATTGTTTTTACATTATAACGAGTTGTTAA
ATCACTAGGTGAAAGTACCGCGGATTAGTTTG-AAGTGGATATGGATCGTCCT----AAGTGATCAAGTAATAT-----G
GATATGGCATATTACTTGATCACT-------TAGCCAGGATATCCATCC----TTGAAACTAATCTACAGTT--------
-------------------TCTCTCATAAATAATATAATAACTCATC---------------ATCATCATATTAATATAA
AAACTCTTGCATCATATCATCACCAACAAC-----ACTAGCTAGCTAATAATCATCATAGTCGTTATTACCACTA----T
TTAATCATCATAGTCATTACCGCTATCTAATCACCACCAACACTAGCTTAAAGAAGAAACATTCACTTGTACCAGAAGCA
AAGATATCATCGAGTTCAACATGTTCATGAGATTATAAGCGTTCATAAGACC----ACAAAAGCAAATCA
>chr7D_2327
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---------CACTAGTGCAGAACCGGGATTTAGCACCGGTTCGTAAGGGCCTTTAGTGCCGGTTCTGTAACCGGCACTAA
AGGGTGGGGACTAAAGGTCC---CC----CCCCCTTAGTACCGCTTCGGCACGAACCGCCACTAAAGTGCCACCACGTGG
CACGAGCCAGGGCCGGGTGCGGGGAGACCTTTAGTACCGGTTGGTAACAC----------TAAATGTTTGG-GGGG---G
GTTAT-TTTTTTATTTTTCCTTTAATTTTGTGTTTTCAATTTAATTTAGAGATTGTTTTTACATTATAATGAGTTGTTAA
GTCATTAGGTGAAAGTACCGCAGAT---------------------------T----AAGTGATCAAGTAATAT-----G
GATATGGCATAT-ACTTGATCACT-------TAGCTAGGATCCAT----CCAGTTGAAACTAATCTGCGGTT--------
-------------------TCTTTCATAAATGATATAATAAC---TCATCATC---------ATCATCATATTAATATAA
AAACTCTTGCATCATATCATCACCAACAACAGTATACTAGCTAGCTAAAAATCATCATAGTCGTCATTATCACTA----T
TTAATCATCATAGTCATTACCGCTATCTAATAACCACCAACACTAGCTTAAAGAAGAAACATTCACTTGTACCAGAAGCA
AAGATATCATCGAGTTCAACATGGTCATGAGATTATAAGCGTTCATAAGACC----ACAAAAGCAAATCA
>SNPs
---------S----S--------------------------------S----------------S--------SS-----
------------S-----------------------------------S-----------------SS----SS------
--------------S-------S------------------------S--------------S---------------S-
---------------------SS------------SS------------------S--------S---------------
------S------------S-----------------------S----S---------------------S-------S-
-------------SS--S---------S-----------------------------------S----S-----------
------S---------S---------------------------------S--S---S---S-----------S-S----
-------S---SS---S---------S-----------S----------S---------S--------------------
------------S---S---SS---------------------------------S--------S---------S-----
-----------S------S-S------------------------------------------S-S--------------
--------------------------------SSSSSSSSSSSS------------------------------------
----------------------------------------S--------SS-----------------------------
------S----------------------------------------------S-----------S--------------
------------------------------------------------------------S-------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
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--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
------------------------S------S----------S----S--S-----------------------------
-----------------------------------------S--------------------------------------
-----S------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS----------------------------S---------S-----------S--------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
------------------S-------------------------------------------------------------
-----------------S--------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------S-----------------------------------------------------------
---------------------------------------------------------------S------
>forward_464
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--------------------------------------------GTCTTCTAGCTCGGACCAGC----------------
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>reverse_1963
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------------------------------------------GCCTAAAGCCCTAGAGCAGC------------------
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>forward_534
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----------------------------------AACCACTTGCCTCCACTGTC--------------------------
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>reverse_2409
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--------CCACTAGTGCAGAACCGGG-----------------------------------------------------
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----------------------------------------------------------------------
