>input_sequence_63496
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---------------------------------------------------------ATGTTTCAGGTACAGATTGGTTT
TGTGATGGCCGGCTCCGAGGGCGTGAGGGGTTTGGCAGCATCAGTGGGAGAGCTACACATGGAGGCATCACCATCGCGGG
AGGAAGGAACCAATGGGCATGGTAGTGCTCTAGCCTTGCTCTGATGTAGTATCACTAGATTTTGCGGCCTTCTATCTGTC
TATTATTGCCATATATGTTACTTAGTTGGATACAAGTTTCTGCTTAATT-----------------------------AA
TACTAGCATTCCATGTCATCACAAGTTCACAACTAGTT-------------------------GTTTTCCACCAATTTCC
ATTCAGGCAACGGTGATGCTG---CT---------GCTGTGGACGATGATGTCTGGGGTGATGCCTCAGATTCTCCAGGG
CATGATTCTGACTTGAAAAGAGAATGGGAGCACAGGCAGGAGCAGTTTCATAAGGTACATGATTATTTTGATTTCCATGG
TTATTGATTCA---------TTTGTGAATCATG-AATTTGCGTCCATATCGAAGAGGTTTGAAAATAAGGCTTTTGGTTT
CTCTGTAGATGGGCTATAGGGATGGTATAACCGAAGGGCAGAAGGAT-GTTGCCCAAGAGGGGTTCAACCTTGGGCATAG
GCAATCTGCGGATGTCGCATTCAA-----GTGGGGTCTCGTTCGGGGGATTACTAGGTAAATTGCAT-----TTCTGGTC
GTGCGAATAACAGTTTTCTTGTATTGAGTTTCTCATGTGTCATTCTCATTTATTATATTTTCCTTTTGCTGTCCTTCAAG
CAGTGCATTAGCTAGTCTTCCCGACAGGTTAAAAGAAAAGTTGCTGCTCGACGCCCAGCGTAGAGGAAAACTTGAAGATT
TGCACAACTCTGTGCAAGAAATTTCAGCACAGGGTGCCCTGCAGCTGTTTCATGAGAGTACTCTTCAGGATAATCGTCGA
CCAGAGGAAAGCAAGATCCAAACTATTCCAAAGGACCTTCTGCTTTTGTTGCAGGAATGCCCAGATGTGCATGTTAGTGA
AGAGTTGAAACGAGTTCCGTAA----------------------------------------------------------
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-----------------------------------
>chr3D_1_TraesCS3D01G485500
TTTTCTCTTGTC--TCACAAAATGCGTTCACAGAAATCGCGCGAGAGAGAGACGAAAAAATAGGGAAGGTAAATCCTGGA
CGGCCACGGCCATTGGATATGCGATGGACGGCTGACAGGAGGAGGGCACCATCGG--TCTCTCTGGAACGCAGGCTGGTC
CACGACT-------------------CCTATCCCCTCGCCGCTCGCT-CTCTTCTCTACTCTTGCCGACGCCGCCGCC--
-------------------------------------------------TCCCCGCGGATCCCCGTCGTCGGATCCCTCC
GGCGCCTCCCAACCCCACCAGCCGCCGCCTTCCCGGTAGAGCTGACACGC-CCCCTCCGCTCCCGGCCTCGCCGTCCCTG
TCGAGCAGAGCCAGGT------AAGGCTCCATCTTCTTCCGTTTCTTTTTCTTCCTTCCTTGCTGGTTCCGTCGCACGAG
TTCTGCGATTCCTTCAAGCCCTAGCTAGGTTCCAGGATGGATGCG----GAGCGAGATGAAGGTTTGATGTAAACTTTCA
TGCTCCCTGTCTGTGAGAGTTTCCGTGATCGGGTGAATGTGAATTTACTGTCTGTCAACAATTTCTGTGTATGTCCATGA
GATGCATAAATAATTTTA--------------------------------------------------------------
---TTTGCTCTTCTCGGACCAGTGTCAGACCATACGCATGTTGAGTAGAAAAAGACACAGTTTTGCTAAAGCGCATCTAG
ATGTGCCATAAGTGTTGCACATCCAAGTCCTGGATGTGGATCAAATTTTGTG---TAAACTACAGTGCCCTGCGCATGTT
CTGTGTGGAGAAAAAGCATTAAAAAGAAAAAGGGAAGGGCTCCCTCTGGAGTGCTGCTCTCCGTAGCGGGTAGCAACTGG
AGCAGCTTGTGGTTGAGGAAGAAAGAGGAGCATAGGTCATTGCATAT---TGGGGTATTTGGGTGTTAGTGATGACGCCT
TTTAGTGAAAGAGGCAGGACGAGTTAACGATTGGCAATATGTTTATGATACTGGCCAATGAACTAAATGGGGGAAATAAG
CTG--------------------CTGCCTGTCAACTGACCATTCTTGTTGGTGTTCCATGTTTCAGGTACAGATTGGTTT
TGTGATGGCCGGCTCCGAGGGCGTGAGGGGTTTGGCAGCATCAGTGGGAGAGCTACACATGGAGGCATCACCATCGCGGG
AGGAAGGAACCAATGGGCATGGTAGTGCTCTAGCCTTGCTCTGATGTAGTATCACTAGATTTTGCGGCCTTCTATCTGTC
TATTATTGCCATATATGTTACTTAGTTGGATACAAGTTTCTGCTTAATT-----------------------------AA
TACTAGCATTCCATGTCATCACAAGTTCACAACTAGTT-------------------------GTTTTCCACCAATTTCC
ATTCAGGCAACGGTGATGCTG---CT---------GCTGTGGACGATGATGTCTGGGGTGATGCCTCAGATTCTCCAGGG
CATGATTCTGACTTGAAAAGAGAATGGGAGCACAGGCAGGAGCAGTTTCATAAGGTACATGATTATTTTGATTTCCATGG
TTATTGATTCA---------TTTGTGAATCATG-AATTTGCGTCCATATCGAAGAGGTTTGAAAATAAGGCTTTTGGTTT
CTCTGTAGATGGGCTATAGGGATGGTATAACCGAAGGGCAGAAGGAT-GTTGCCCAAGAGGGGTTCAACCTTGGGCATAG
GCAATCTGCGGATGTCGCATTCAA-----GTGGGGTCTCGTTCGGGGGATTACTAGGTAAATTGCAT-----TTCTGGTC
GTGCGAATAACAGTTTTCTTGTATTGAGTTTCTCATGTGTCATTCTCATTTATTATATTTTCCTTTTGCTGTCCTTCAAG
CAGTGCATTAGCTAGTCTTCCCGACAGGTTAAAAGAAAAGTTGCTGCTCGACGCCCAGCGTAGAGGAAAACTTGAAGATT
TGCACAACTCTGTGCAAGAAATTTCAGCACAGGGTGCCCTGCAGCTGTTTCATGAGAGTACTCTTCAGGATAATCGTCGA
CCAGAGGAAAGCAAGATCCAAACTATTCCAAAGGACCTTCTGCTTTTGTTGCAGGAATGCCCAGATGTGCATGTTAGTGA
AGAGTTGAAACGAGTTCCGTAAGCAAGTTTGT--AAATGTAATTGCAAGCACCACTTGTTTCGAAGTCTTGCCGGATCGC
TTAGACTGAGTTCTTCTGAAGGATGTAACTGTAAATCCTGTGATACTAAG------------------------------
--------------------------------------------------------------------------------
-------------------------ATTTTCTCTATGGTGTCACCCTTTCTTTGCTCTGAACACCTGTAAATTCGCAGTA
TGAATGACAACAATAATATCTCA-----TGAGTTTGGCATCTTCCTGTTGTTCCTTTACCATGCTACGGTTTACTTGCCC
C-CTTGGCGTTTGCCAATGTAGT-GTATTGATATTTCCACTGACTTGCTCCACTCTGGCAT-------------------
-------------------------TCACTAGATGTTCTATTTTTGCTAGTTATAAA-TTTTGGAAGGTTCTGGCATTTT
GTAGTACTGACAATGCGGTAAGTATCTACAGTCAAGAACGCAAATGCAGTAATCGCAGTACTGACAACGCGGTAAGTATC
TACAGTT-AAGGATGCAAATGCAGTAGTACATATTTAATGAAACCTCTCATCTCCTTTGAGCACTTATCCATATTTGGTG
TTTTGTACAGACAGAAAATTATAGTCTTGCGTCAGCTGGCTCAGCAAATGCATTCAAATCTGCTCAACTGAAGGG-CCTG
ATCCACTCCTCAAAGTTGCTATGCCCTACTGCTGTTAATGTGATGTATTCTTTTTTTTTGAAAGGTTAATGTGATGTATT
CTGATATATCCTTTGATGGTCCATGATAGTTGTTGGACTGCACACTGTGTCAGTAAATTGGCTGGTTCTGTTCCAGTTAC
AGGGGGGTTGGTGTGATTGGAGCAT--CAAGCTGAGCATGAGCATCCACCCTTCAGGTTGGTGAGAGCATCAAACCTTGT
ACC-GTTGTGGCTTGTGACTGTTGGTTTCTGAGTGTTCATGCCATATAT------------------TCATGCTTGATCC
ATATGCCGCCTTCTCGTACCCGTTTGGAGCATTTCTTGCTGTTTATATTCAGTGCCATTTATTGTCGTATCCGTTTGGTG
CGTTT-CTTGTTGTTTCTATTCAGTGCCATTTATC
>chr3B_2
TTTCTCCTGTCTCATCACAAAATGCCTTCACATAAATCGCGGGAGAGAAGA---AAAAAATAGGGAAGGTAAATCCTGGA
CGGCCGCGGCCATTGGATATGCGATGGACGGCTGACAGGAGGAGGGCACCGTCGGTCTCTCTCTGTGACGCTGATTGGCC
CACGATAGGAGGCTGCCTCTCCTCTCCCTATCCCCTCGCCGCCGCTCGCTCTTCTCTGCTCTTCCAGACGCCGCCGCCGC
CGCCTCCTCCTCCTCCTCCTCCTGCTGTAGCTCCCACCCGACGCCGTCCTCCCAGCGGATCCCCGTCGCTGGCTTCCTGC
GCCCCTAC----CCCTACCAGCCGCCGGCTTCCCCGAAGTGCTCACACGCCCCCCTCCGCTCCCGGACTCGCCGTCCCCG
TCGAGTCGAGCAGAGTCAGGTAAAGGCTCCATCCTCTTCCGCTTCTTTTT----CTTCCTTGCTGGTTCCGTCGCACGAG
TTCTGCGATTCCTTCAAGCCCTAGCTAGGTTCCAGGATGGATGAAGATCGAGCGAGGGGAGGGTTTGATCCGAACTGCGA
TGCTTTCCATGATT------------------GTGAACGTGAATTTAGTATTTGTGAATAATTTCCTTGTATGACCAAAA
TAAGTCAAGTGTCGTGGTTTTAGTTGAACTATAAATTTGAACTAAAACCACGCCACTTGTTTTAGGGCCAGAGGGGGTAT
GATTTTGCTCTTCTCGGGTCAATTG--GAGCATTCTAATGTTGAGTAGAAGAGGA-------------------------
--------------------------------GATATGGATCGAATTTTGCGGTATCAAGTACCGTGCCGTGCGTATTTG
TTTTCGGAGAAAAAT--ATTGAAAAGAAGCGCTGCTGTGCGGCCACCTGAGGGCTTGCTTGGTACCGTGTAGCGGCTAGG
AGCAGCTTGTGGTTGAGGAAGAAAGAGG-GCATATGTCATTTCACATACATGGGGGTATTTGGTGTTAGTGATGATGTCT
TG--GTGAAAGTGGTAGGGCGAGTTAACGATTGGCATACGAAAAGAAGGGTGTATGTATTCTATGATATATGGGCTCGAT
GAGCTAAAGAGAAAAACAAATTTCTGCCTGTCAACTGACCATTCTCCGTGGTACTCCATGTTTCAGGTGCAGACTGGTTT
CCCGATGGCCGGCTCCGAGGACGTGAGGGGTTTGGCAGCATCCCTGGGAGAGCTACACGTGGAGGCATCACCATCGCGGG
AGGAAGGAACCAATGGGCATGGTAGTGCTCTAGCCTTGTTCTGATGTTGTATCACTAGATTTTGCAACCTTCTATATGCC
TATTGTTGCCACGTATGTTACTTGGC----TACAAGTTTCTGCTTAATTAAACAATGTAGATTCTGTTTGAACCTG--AG
TACTAGCATTCCGTGTCATCACAAGTTCACAACTAGTTTTCCACCAATTTCCGTTCAAAACTAGTTTTCCACCAATTTCC
ATTCAGGCAATGGTGATGCTG---CTGCTGCTGCTGCTGCGGATGATGATGTTTGGGGTGATGCCTCAGATTCTCCAGGA
CACGATTCCGACTTAAAAAGAGAATGGGACCACAGGCAGGAGCAGTTTCATAAGGTACATGATTAATTTGACTTCCATGG
TTATTGATTAA---------TTA-TGAATCTTGAAATTTGCATGTATATTGAGGAAGTTTGAAAGCAAGGCTTTT-GTTT
CTGTGTAGATGGGCTATAGGGATGGTATAACCGAAGGGCAGAAGGAT-GTTGCCCAAGAGGGGTTCAACCTTGGGCATAG
GCAATCTGCAGATGTTGGATTCAA-----GTGGGGTCTCGTTCGGGGGATTACTAGGTAAATTGCAT-----TTCTGGTC
ATGCGAATAACAACTTTCTTGTATAAAGCTACTCTTGCGTCATTCTCATTCATTATATTTTCCTTCTGTTGTCCTTCAAG
CAGTGCATTAGCTAGTCTTCCCAACAATCTAAAAGAAAAGCTGCTGCTCGACGCCCAGCGTAGAGGAAAACTTGAAGATT
TGCACAAATCTGTGCAAGAAATTTCAGCAGAGGCTGCACTGCGGCTGTTTCACGGGAGTACTCTTCAGGATAATCGTCAA
CCAGAGGAAAGCAAGCTCCAAACTACTACAAAGGACCTTCTACTGTTGTTGCATGAATGCCCAGATGTTCATGTTAGTGA
AGAGCTGAAACAAGTTCCGTAAGCAAGTTAGC--AAATGTAATTGCAAACGCCACTGGTTTCGAAGTCTGGCCGAGTCGC
TTAGACTGAGTTCTTCTGAAGGATGTAACTGTAAATCCTGTGATACTAAG------------------------------
--------------------------------------------------------------------------------
-------------------------ATTTTCTGTGTGGTGTCACCCTTTCTTTGCTATGAACGCCTGTAAATTCGCAGTA
TGAATGGCAATAGTAATATCTCA-----TGAGTTTTGCATCATCCTGTTGCTCCCTTACCATGCTCTGGTTTACTTGAGC
C-TTTGGCATTTGCCAATGTACT-GTGTTGATACTTCCACTGGTTTGGTCCGTTCTGACATGCTTGGTGAAGTCTGGACA
ATTCTTAT---ACTCAGTGCAGAGAGCACTAGATATTTTGTACTTATGCTAGTCCAGTTTTTGAAACATTCTGGCATTTT
GTAATACTGACAATACGGTAAGCCGCATAAATTCCAT-------------------------------------------
--------------------------------------------------------------------------------
TTCTGTGCAGACAGAAAATGCTAGTTTGGCATCAGCTGACCCAGCAAATGCATTCAAATCTGCTTAATTGAAGGG-CCTG
ATCCACTCCTCAAAGTTGCTATGCCCTACTGCTGTTAATGTGATGTTAAC------------------------TGCATG
ATGCTATATCCTT--------------------------------CATGTCAGTAAATTGTCTGCCTATGTTTCAGTCAC
AA-GGGGTTGGTGTGATTGGAGCAT--CAAGCTGAGCATGAGCATCCACCCTTGAGATTGGTGAGAGCATCAAACCTTGT
ACCCGTTGTGGCTTG--ACTGTTGGTTTTGCGTTGTTC------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>chr7A_1126
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----------------------TAGTGCCCTAGCCTTGTTCTGATGCAGTATCACTAGATTTTGCAACCTTCTGTCTGTC
TTTTGTTGCCATGTATGTTACTTGGA----TACAGTTTCT----------AACAATGTAGCTTCTGTTTGAACAAAAAAA
AAATAGCATTCCATATCA--------TCACAGCTAATT-------------------------GTTTTCCACCAATTTTG
ATTCAGGCAATGGTGAAGATGCTGCT---------GCTGCAGATGATGACTCCTGGTGTGATGCTTCAGATTCTACAGGA
CATGATTCCAGCTTACACAGAGAATGGACCCACAGGCAGGACCAGTTTCATAAGGTACGTGAATATTTTGACTTCAATTT
GATACAGAGTTTGTGTGATGTCA-TGAATCATGAATTTGTGTG--ATGTCCAAAAAGTTTGAAAGTAAGGCTTTTGGTTT
CTTTGTAGATGGGCTATAGGGATGGTATAACAGAAGGGCAGAAGGAT-GCTGCCCAAGAGGGGTTCAACCTTGGGCATAG
GCAGTCTGCGGATGTTGGATACAA-----GTGGGGTCTTGTTCGGGGGATTACTAGGTAAATTGCAT-----TTCTGGTT
GCGTGAATAACAGTTTTCTCGTATAAAGTTCCTCTTGTGTCATTCTCATTTATTATATTTTCGTTTTGTTGTCCTTCAAG
CAGTGCATTTGCTAGTCTTTCCGACAGTCTTAAAGAAAAGTGGCTGCTCGACGCCCAGCGTAGAGGAAAACTTGAAGATT
TGCACAACTTCGTGCAAGAAATTTCAGGACAGGGTGCTCTGCAGTTGTTTCACGAGAGTACTCTTAAGAATAATCTTCGA
CCAGAGGAGAGCAAGCTCCAAACAATTACAAAGGACCTTCTCCTGTTGTTGCACGAATGCCCAGATGTTCATGTTAGTGA
AGAGTTGAAACGAGTTCCATAAGCAAGGTCAT--ACATGAAATTGCAGGCACCACTGATTTTGAAGTCTGATAGAATCAC
CCACACCTAG-TCTTCTGAAGGATGTAACAGTAAATTCTGTGATACTAAG------------------------------
--------------------------------------------------------------------------------
-------------------------ATTTTCTTTATGGTGTCACCCTTTCTTTGCT------------------------
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-----------------------------------
>chr4A_1129
--------------------------------------------------------------------------------
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-------------------------TGCCCTAGCCTTGTTCTGATGTAGTATCACTAGATTCTGCAACCTTCTGTCTGTC
TTTTGTTGCCTTGCATGTTACATGGA----TACAGTGTCT----------AACGATGTAGATTCTGTTTGAACTGG--AA
TATTAACATTCCATATCA--------TCACAACTAGTT-------------------------GTTTTCCACCAATTTTG
ATTCAGGCAATGGTGAAGATG---CT---------GCTGCAGATGATGACTCCTGGTGTGATGCTTCAGATTCTCCAGGG
CATGATTCCAGCTTACACAGAGAATGGACCCACAGGCAGGACCAGTTTCATAAGGTACATGATTATTTTCACTTCCGTGG
TTATTGATTAA---------TCA-TGAATCATGAATTTGTGTG--ATGTCCAAAAAGTTTGAAAGTAAGGCTTTTGGTCT
CTTTGTAGATGGGCTATAGGGATGGTATAACAGAAGGGCAGAAGGATGGTTGCCCAAGAGGGGTTCAACCTTGGGCATAG
GCAATCTGCGCATGTTGGATACAA-----GTGGGGTCTCGTTCGGGGGATCACTAGGTAAACTGCAT-----TTCTGGTC
GTGTGAATAACAGTTTTCTTGTATAAAGTTCCTCTTGTGTCATTCTCATTTATTATATTTTCCTTTTGTTGTCCCTCAAG
CAGTGCATTAGCTAGTCTTCCTGACAGTCTAAAAGAAAAGTTGATGCGCGATGCCCAGCGTAGAGGAAAACTTGAAGATT
TGCACAACTTCGTGCTAGAAATTTCAGCACAGGGTGCGCTGCAACTGTTTCACGAGAGTACACTTCAGGATAATCGTCGA
CCAGAGGAAAGCATGCTCCAAACAATTACAAAGGACCTTCTACTGTTGTTGCATGAATGCCCAGATGTTCATGTTAGTGA
AGAGTTGAAACGAGTTCCATAAGCAAGGTCAT--ACATGAAACTGCTGGCACCACTGATTTCGAAGTCAGGTAGAATCAC
TTAGACCGAG-TCTTCTGAAGGATGTAATTGTAAATCCTGTGATACTAAAG-----------------------------
--------------------------------------------------------------------------------
--------------------------TTTTCTTTATGGCGTCACCCTTTCTTTCCTCTGAACTCCTGTAAATTTGCAGTA
TGAATAATGATAATCATATCTTTCTTCCTGAGTTTTGCATCTTCCTCTTATTCCTTTACCATGCTCTGGTCTACCTGAGC
ATTCCTGAGTATTGGTAG-----------------TCTATTGATTTGATCCATTGTGATATTCTTGGGACAGTCTCGATA
CTTGTTAC---ACTCAGTGCAGACATCACTAGATATTTTATTTTTGCTAGTT-TAAG-TTTTGAAACATTCTGGCATTTC
GCAATACTGACAATGCGG----------------------------------------------------------TATC
TACAGTTAAAGAATGCAAATGCAGTA------------------------------------------------------
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-----------------------------------
>chr7D_1261
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--------------------------TCACAGCTAATT-------------------------GTTTTCCACCAATTTCG
ATTCAGGCAATGGTGAAGATG---CT---------GCTGCAGATGATGACTCCTGGTGTGAGGCTTCAGATTCTCCAGGA
CATGATTCCAGCTTACACAGAGAATGGACCCACAGGCAGGACCAGTTTCATAAGGTACATGATTATTTCGTCTTCAATGG
TTATTGATTAA---------TCA-TGAACCGTGAATTTGTGTG--ATGTCCAAAAAGTTTGAA-GCAAGGCTTTTGGTTT
CTTTGTAGATGGGCTATAGGGATGGTATAACAGAAGGGCAGAAAGAT-GTTGCCCAAGAGGGGTTCAACCTTGGGCATAG
GCAATCTGCGCATGTTGGATACAA-----GTGGGGTCTTGTTCGGGGGGTTACTAGGTAAATTGCAT-----TTCTGGAC
GCACAAATAACAGTTTTCTTGTATAGAGTTCCTCTTGTGTCATTCTCAGTTATTATGTTTTCCATTTGTTGTCCTTCAAG
CAGTGCATTTGCTAGTCTTCCCGACAGTCTAAAAGAAAAGTTGCTGCTCGACGGCCAGCGTAGAGGAAAACTTGAAGGTT
TGCACAACTCCGTGCAAGAAATTTCAGCACAGGGTGCTCTGCAGCTGTTTCACGAGAGTACTCTTAAGGATAATCTTCGA
CCAGAGGAAAGCAAGCTCCAAACAATTACAAAGGACCTTCTACTGTTTTTGCACGAATGCCCTGATGTTCATGTTAGTGA
AGAGTTGAAACGAGTTCCATAAGCAAGGTCAT--ACATGAAATTGCAGGCACCACTGATTTCGAAGTCAGGTAGAATCAC
TTAGACCGAG-TCTTCTGAAGGATGTAATTGTAATCATATC---------------------------------------
--------------------------------------------------------------------------------
---------------------------TTTCTTTATGGTGTCACCCTTTCTTTGCT------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>chr3D_1475
TGTTCTGTGCAGACAGAAAATGCTAGTTTGCATCGGCTGGCTTCAGCAAATGCACTCAAATCTGCTCAACCGAAGGGCCT
GATCCACTCTCATAGTTGCTATGACCTACTGCTGTTAATGGGATGTTAACTGCATGCTGATATGTCCTTTGATGGTCCAC
GGTAGTTATTGGACTGCACACCATGTCAGTAAATTGTCTGCTTCTATTTCTGTTACAGGGGTTGGTGTGATTGGAACATC
TTGGTTTTGAATGTTAATGCCGTCTATTCATGGTGATGCATGCTTCAGGTTGGTGAGAGCATCAAACCTTTGTATCCGTT
GTGCCTTGTGACTGTTGGTTTTGAGTGTTATATTCATGGTGATTCATGCTTGATCCATCTGCCTTCTTCACATATCCGTT
TGGAGTGTTTCTTGTTGTTCCTATTCAGTGCCATTTATTTCGTTTCATGTGGGACTATTTCTTGGTTGCTCCTGAGTTGA
ATGAAGTACCAGGCCCGCATGCAGACTCTTTTTGTCTGTCTGCATTGTTCAAGGCTGCATCTTATACTCATGACATTGCA
GGACATAATTTGAAATGGTTTGGTGCGCAGCACCAGAAATCCCTGGACGAAATGATCGAACCTTTGGAGATTCTTCCGCC
GCCTCTTGTTGCCTGATATGGCATTCGGTTAGCCTGTTATGCACTGTATAGCCCAGCAGGTTTGCACCATCTTGTTCTAC
TGTCTCAGTTTGGCACCAAAGTAGACCAGCAACCAACAGTTAGTTGCACTCATATCAGTTAGTTGTGAATTTGCGTTGAT
ATCAATCAA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------AGAACTTTGACGATAGGGCTTCTGGTTT
CTCTGTAGATGGGCTATAGGGAAGTCATAACCGAAGGGCAGAAGGGC-GCTGCCCAAGAGGGCTTCAATCTTGGGCATAG
GCAATCTGTGCATGTCGGATACAGGTGGGGTGGGATTTCGTTCTGGGGATTACTAGGTAGTAGTAAGTTGCATTCCTGCC
ATGCGAATAGCTTGCTTCTTGTATATAGTTCCT-TTGTGTCGTTCTTATTTATTATATATTCCTTTTGTTGTCCTTCAAG
CAGTGCATTAGCTAGTCTTCCCGACAGTCTAAAAGAAAAGTTGCTGCTCGATGCCCAGCGTAGAGGAAAACTTGAAGATT
TGAACAACTCTGTGCTAGAAATTTCAGCAGAGGGTGCGCTGCAGCTGTTTAAAGAGAGTATTCTGGAGGATACTCGTCGA
TCAGAGGAAAGCAAACTCCAAACTATTC-----------------TTGTTGCACGACTGCCCAGATGTTCAAGTTTCTGA
AGAGTTGAAACGAGTTCCATAACCAAGGTCAGAAAAATTAAATTGCAAGCACCACTGGTTTCGAAGTCTGGTAGAATCAC
TTAGACCGAGTTCTTCTGAAGGATGTAGTTATAAATCCTGTGATACTAAGGCCGTGTTCGGTAATCATCCACTCCCGAAA
TCTGCAGAGCGGGGAAACTGCAACTCCTCCGTTTTACACTGCAGCTCCGTCAACTCCGCTCCCGGAGTTGTGGAGCGGAG
TGGTACCGAACAGGGCCTAATTAAGATTTTCTTTATGGTGTAAC-CTTTCTTTGGCATGAACTCCTGTAAATTCCCATCA
TGAATGACAATAGTAATATTTTTCTTCCTGAGTTTCGCATCATCGTGTTATTCATTTACCATGCTCTGGTTTACTTGAGG
CTTTTGGCATTTGCTAGTGTACCCGTAGTGGTATTTCCATTGATTTGATCCATTGCGGTATTCGTGGGAAAGTCTGGATA
ATTG---CTGTACTCAGTGAAGATATCATTAGACATTCTGCTTTTGCTAGTTATAAG-TTTTGAAACATTCTGCCATTTC
GCCATACTGACAATGTGGTAAACTGAAAATGCACGTTCCCAGAAAATCATTAGATAT-----------------------
----------------------------------------------------TCTATGGAGCATTTACCCACTTCTTGTC
CTTTCCACGTTTTGTGCAGAGAA----------------------AAATGCACTAAAATGTGATCGACGGAAGGA-CCTG
ATCCACTCCTCAGAGTTGCTATGCCCTACTGCTGTTAATGTGAGGTTAAA------------------------TGCATG
CTGATATATCCTTTGTTGGCCCATAATAGTTGTTGGGCTGCACACCATGTCAGTGAATTGTGTGCTTCTCTTTCAGTTAC
A-GGGGGTTGGTGTGATTGGAGCATATCAAGCTGAGCATGAGCATCCCTCCTTCAGGTTGGTGAGAACATCAAACCTTGT
ACCCGTTGTGGCTTGTGACTGTTGGTTTTG-AATGTTAATGCC--------ATCTATGCATGGTGACTCATGCTTGATCC
ATCTGCCTTCTCCTCGTATCCGTTTGGAGCGTTTCTTGTTGTTTCTATTCAGTGCCATTTATTGTCATATCCGTTTGGAG
CGTTTTCTTGCTGTTTCTATTCAGTGCCATTTGTC
>chr3B_1662
CTTCAGGTTGGTGAGAGCATCAAACCTTGTATCCGTTGTGACTCGTGACTGTTGGTTTCGAGTGTTATATTCATGGTGAT
TCATGCTTGATCCATCTGCCTTCTTCACATGTCCGTTTGGAGTGTTTCTTGTTGTTCCTATTCAGTGCCATTTATTTGGT
TTCATGTGGGACTATTTGTTGGTTGCTCCTGAGTTGAATTCAGTACCAGGCCCAGATGCTAACTCTTTTTTGTCTGTCTG
CAGGACATAATTTGCAATGTTTGGTACTCAGCAGTCAGCACCAGAAATCCCTGGACGAAATGATCGAACATTTGGATATT
CTTCTGCTGTCTCTTGTTACCTGATATGTCATTCGGTAGTCTGTTATGCATTGTATAGCCAAGCAGGTTTGCACCATCTG
TTCTACTGTCTCAGTTTGGCACCAAAGTAGACCAGCAACCAACAGTTAGTTGCATTCATAACAGTTAGTCCTCCCCCAAA
AAATTTCTTCACAGTTTGGTCCAAGCCTGGGCAGGGGGCAGGACCAAATAGCT---------------------------
--------------------------------------------------------------------------------
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------------GTTTTCTTGTATATAGTTCCT-CTGTGTCATTCTCATTTATTATATTTTCCTTTTGTTGTCCTTCAAG
CAGTGCATTAGCTAGTCTTCCTGACAGTCTAAAAGAAAAGTTGCTGCTCGATGCCCAGCGTAGAGGAAAACTTGAAGATT
TGCACAATTCTGTGCAAGAAATTCCAGCAGAGGGTGCACTGTGGATGTTTCATGAGAGTATTCTTCAGGATAATCGTCAA
CCAGAGGAAAGCAAGCTCCGAACTTTTCCGAAGGACCTTCTGTTGCTGTTGCACGACTGCCCAGATGTTCAAGTTTCTGA
AGAGTTGAAAAGAGTTCCGTAACCAAAGTCCT--AAATGAAATTGCAAGCACCACTGGTTTCGAAGTCTGGTAGAATCAC
TTAGACCGAGTTCTTCTGAAGGATGTAGTTATAAGTCATGTGATACTAA-------------------------------
--------------------------------------------------------------------------------
--------------------TTAAGATTTTCTTTATGGTGTAACCCTTTCTTTGCCATGAACTCCTGTAAATTCCCATCA
TGAATGACAATAATAATA-TTTTCTTCCTAAGTTTCGCATCTTCCTGTTATTCATTTACCATGCTCTGGTTTACTTGATG
CTTTTGGCATTTGCTAGTGTACCCATAGTGGTATTTCCGTTGATTTGATCCATTGTGGTATTCTTGGGAAAGTCTGGATA
ATTG---C---ACTCAGTGAAGATATCATTAGACATTCTGCCATTGCTAGCTATAAG-TTTTGAAACATTCTGCCATTTC
ACCATGCTGACAATGTGGTAAATTGAAGATGCACGTTTCCAGAA-ATCATTAGATAT-----------------------
----------------------------------------------------TCTATGGAGCATTTACCCATTTTTTGTC
CTTTCCATGTTTTGTTCAGAGAA----------------------AAATGCACTAAAATGTGCTCAACTGAAGGACCCTG
ATCCACTCCTCAGAGTTGCCATGCCCTACTGCTGTTAATGTGAGGTGAAC------------------------TGCATG
CTGATATATCCTTTGATGGCCCATGATAGTTGTTGGACTGCACACCATGTGTGTAAATTGTCTGCTTCGATTTCAGTTAC
A-GCCGGTTGGTGTGATTGGAGCATATCAAGCTGAGCATGAGCATCCCTCCTTCAGGTTGGTGAGAGCATCAAACCTTGT
ACCCGTTGTGGCTTGTGACTGTTGGTTTCC-AGTGTTAATGCCATCTATTCATCTATTCATGGTGATTCATGCTTGATCC
ATCTGCCTTCTTCTCGTATCCGTTTGGAGCGTTTCTTGCTGTTTCTATTCAGTGCCATTTATTGTCATATCTGTTTGGAG
CGTTT-CTTGCTGTTTCTATTCAGTCCCATT----
>SNPs
----------SS--------------------S---------------S--S----------------------------
--------------------------------------------------S--------------SS-------S---S-
-----S--------------------------------------S------------S-------S--------------
-----------------------------------------------------S---------------S--S-S---S-
-S-S-S--SS-S---S-----------S-----------S---S----------------------S-------------
------S----------------------------------S--------SSSS--------------------------
--------------------------------------------S-----------SS--S--------S-S-----S--
----SS-SS-SSS-SS-SS--SSS-S-SSSSS-----S-----------S-S---S--S------S-----------SS-
--S--S--SSSSS--S----------------------------------------------------------------
------------------S--S--S-S------S-S--------------S-S----SSSSS---SS--SSS--S-SS-S
--SSSS--SSSSSSSSSSSSSSSSSSSSSSSS---S------S-------S-----S--S---S-----S----S--S-S
S-S-SS-SSS----SSS---S-------SSSSS-SS-S--SS--S-SS---S---SSSS-SSSSSSSS-SSSSSSSSS--
----------------------------S-----S------S--S----------SSS--S--------------S-S--
-SSS-------S--S---S-----------------SSSSSSSSSSSSSSSSSSSSS--SSSS-S-SSSSS--SSSSS-S
SS-------------------------------------------SSS----SS--------------S----S------
SSS-----------------S---------------------SS--------------S---------------------
--------------------------------------S--------------------------SS-------------
----S-------S----------S-SSSSS--------------------------------------------------
--------------------------------------------------------------------------------
----------S----------------------------S---S------------------------------------
--------S-----S--------------S-----------------------------------------S--------
---------S------------SS-----------------S-SS----------S------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
------------------------S-----S---S---------------------------------S-----------
---------------------------SS---------------------------------------------------
-------------------------------------S------------------------------------------
---------------S----------------------------S--------S--------------S-----------
-----------------------------S--------------------------S------------S----S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------S-----------------
----------S------------------------S-----------------------------SS----------SS-
--S------------------S---------------------S---S----S---------------------------
----------------------------------S---------------------S------S--SS------------
---S-------------------SS-S-S---SSSSSS-SSS--SSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSS----
-----------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSS--SS-S-----S---S----S---S--S
-------------------SS----S-S--S-------S-S---------------------------------------
----------------------------------------------SSS-SSSSSSSSSSSSSSSSSSSSSSSS--S--S
-------------------S-------------------------SS-------------S---S-------S-------
-S------------------------------------------------------------------------------
-----------------------------SS--------------S----------------------------------
--S----SS---------S-----------S-------------S---------------------S-----------S-
----------S---------------------S--
>forward_52
--------------------------------GAAATCGCGCGAGAGAGAGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>reverse_2297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------TGTTTCGAAGTCTTGCCGGA----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------
