>input_sequence_63495
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---CCAACAAGAGGCAGATTCTCCCCTCTGCCTTGGAGCCACTAAAACATATTGCCATCCGGACAAATCTTCTTCCTGTA
ACACATCCATCCATTTCTAGCTGCAGGCAGAGCAGAGTTGAGCGTGTGGGAGTCGAAGGAGATCGAGATGGCTACTGCAT
ATGCTCCTCCGATGGCAAGCCAGGTGATGAAGAGCGGCTTGGTGTGCTCCAAGCCGAGGGGACTGTCCGGCGCTTCACTC
ACCAGGAGGCCCCGCTTCGTCGTCAAGGCCGTCAAGTCCGACAAGGTCAGTTGCAATTGCATGCAAGAGAGAGCTAAAAT
TAAGCGATTCACCACACTTTTCCTTTGTTCTAACTTGCAAGTCTTCCTGTATCTCATACATATTCTTGTGTC--------
-------AAACAGGGGACGTACCAGGTGGTCCAGCCCATCAACGGCGACCCATTCATCGGCAGCCTGGAGACGCCCGTCA
CGTCCAGCCCCCTCGTCGCGTGGTACCTCTCCAACCTTCCCGCGTACCGCACCGCCGTCAGCCCGCTCCTCCGTGGCATC
GAGGTCGGCCTCGCCCACGGCTACCTCCTCGTCGGCCCCTTCGCGCTCACCGGCCCGCTCCGCAACACGCCAATTCACGG
CCAGGCGGGAACCCTCGGCGCCATCGGCCTCGTCTCCATCCTCAGCGTCTGCCTCACCATGTACGGCGTCGCCTCCTTCA
ACGAGGGCGCGCCCTCCACCGCGCCCGCCCTCACGCTCACCGGCCGCAAGAAGGAGGCCGACAAGCTGCAGACCGCCGAA
GGCTGGTCCCAGTTCACCGGAGGCTTCTTCTTCGGCGGCGTCTCCGGCGCCATCTGGGCCTACTTCCTCCTCTACGTGCT
CGACCTCCCATACTTCTTCAAGTAGATTAT--TTATTATTGGCATGCATGTACGATGGGTGCACAACTGCAGATGATGTG
ATCGATCTCTTCT---TGGTGGTTGGTTGAAAGAGTCTATGTATAAATGAACTTACGTATT-------------------
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>chr3D_1_TraesCS3D01G051800
CATTGCAAAGCTCATGCCACCACAACCCTCCACGTCGAGCCCCTGCGTCCATGCACTGACAACCTATTAGTCTGAGGGTG
GGCGATCCAACAGAGAGAGGTGGCCTTGGCTTGCGGCCGCACGAGCGAGGGACACCTTTGCCTTTAACCCCAGTTCTGCA
GTCATGTCCAAGGTTTTGATTACGAAATGAGGCATTTTTACTGAAGGGGACCGGTAAATGTGGTTACCACGAATTTTCAA
GCAAATTTTGAACGAAATTTATAAATTCAAATTCTTTCAAAATAGATATAGATAGCCTTGAACTTATATTTATCTTAAAA
GAGCTACTAGCTCAGTGGAACATTGTCTACGCGAGTGTTGTGAGGTGTTGCCATACTTTACTATACATTGTGCATTTGAA
TTCAACAAATTCAAAAAATTCGATTTTTTCGCTTGAAATGACCACTTACCTAGGGGGACCGAAATATCTGGTGACCATGG
TAAATCTTGAAATTTTGAGCATTAACCAAAACCCATGTCCACCCTGGCGGACAGAAGACATCGTTGAGGAACACGCCGAG
GCTAGTGTATTGAATGGTGAAAATTAAATTTTTTATTTATATATCTTGCTCATTTTTTCCT--AAATAATCCTCTAAATG
TAGAAGCTATATTATTAACGTT-TTTTCATTTTACCATACCTACAGATTTT-GGCTCATCAGCTGCCCAT----------
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--------------ACATGTTTGTGTGTTTTACATATTTTCTTTTATATATGTCTTGTATTAGTCATTCAG-------TC
TGCACTACAAAATCTAAATATCAGAATATTTCAGTTACAATCTTATGTTGCTATTCGGCTATATTAACAAATTAGCAGAA
AGGGAGCAAAAAACTGGTTTGGGTACAGCCATAGACAAGTAGAGA--------CCACACACAGAGTGACACGCAGACAGA
ATCCGAAAATTCGGATAAGGGATAGGATTGCAGCCAATGAAAGCCACACAGCTCCGGACCATATCTCGTATGCAGGGGCC
CGCCCAACAAGAGGCAGATTCTCCCCTCTGCCTTGGAGCCACTAAAACATATTGCCATCCGGACAAATCTTCTTCCTGTA
ACACATCCATCCATTTCTAGCTGCAGGCAGAGCAGAGTTGAGCGTGTGGGAGTCGAAGGAGATCGAGATGGCTACTGCAT
ATGCTCCTCCGATGGCAAGCCAGGTGATGAAGAGCGGCTTGGTGTGCTCCAAGCCGAGGGGACTGTCCGGCGCTTCACTC
ACCAGGAGGCCCCGCTTCGTCGTCAAGGCCGTCAAGTCCGACAAGGTCAGTTGCAATTGCATGCAAGAGAGAGCTAAAAT
TAAGCGATTCACCACACTTTTCCTTTGTTCTAACTTGCAAGTCTTCCTGTATCTCATACATATTCTTGTGTC--------
-------AAACAGGGGACGTACCAGGTGGTCCAGCCCATCAACGGCGACCCATTCATCGGCAGCCTGGAGACGCCCGTCA
CGTCCAGCCCCCTCGTCGCGTGGTACCTCTCCAACCTTCCCGCGTACCGCACCGCCGTCAGCCCGCTCCTCCGTGGCATC
GAGGTCGGCCTCGCCCACGGCTACCTCCTCGTCGGCCCCTTCGCGCTCACCGGCCCGCTCCGCAACACGCCAATTCACGG
CCAGGCGGGAACCCTCGGCGCCATCGGCCTCGTCTCCATCCTCAGCGTCTGCCTCACCATGTACGGCGTCGCCTCCTTCA
ACGAGGGCGCGCCCTCCACCGCGCCCGCCCTCACGCTCACCGGCCGCAAGAAGGAGGCCGACAAGCTGCAGACCGCCGAA
GGCTGGTCCCAGTTCACCGGAGGCTTCTTCTTCGGCGGCGTCTCCGGCGCCATCTGGGCCTACTTCCTCCTCTACGTGCT
CGACCTCCCATACTTCTTCAAGTAGATTAT--TTATTATTGGCATGCATGTACGATGGGTGCACAACTGCAGATGATGTG
ATCGATCTCTTCT---TGGTGGTTGGTTGAAAGAGTCTATGTATAAATGAACTTACGTATTCCTCACAATCTTTGCATGG
ATCGATGATACTACGATACTATAACATGCGAATTGTTAATTTCTTAAACAATGCGTGCATAAACAAAACCCAATCAGAAA
CATCTTAGGACCGTGCTAACTTCCG--ACTGATCGAAAGATAGGCAACATATTTGAACGCCTACTTCTTTCTCTAATCAC
ACATACATGCAAGC------------TCAGTGTGATGTGGCCGAGGAGGGACGCATGCAACTAGTCTTGACTTATGATTT
CATACATGCATGCAAATTAAAAAACAAAGTAGATGATGTTAGCAACAAACTCTTCCTATTTTGAAACCGTAAAATGTTTT
GTCGCTCAAACTGTCACTTCAATGGAAAAACCGTTTTCACATAAAAAATTGTTGCGGC-AGAGCTTCGAAAATAGATCCC
ATGTTCGTATGTTTCGACGACTTTTTTCCAGATCAAAATGTTACCTCGTTGGA---------------------------
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----------------------------------------------------------------------CTACGTAAGT
TATTACGCCTGCAGTATGTAACTTGTCATGATGTTTAGACTGAAGTTGCGAGGGGTAT-TTTCCACTATTTTTATGCCTG
GGTAAAAAGTTACCATGATATTTGTATGTTAACTATCAGTTCTGCAATATCACATTCTAGCATCGGTGCCGTGTCTGGGC
CGC-AGGTAAGGTCCATGTGTACACACGGCTAAGGCTTGCTTATGAAACATTACTTTGCGACTTGTGTCAGGCCAGGCCA
GTTTAGGCGTGTGCTGGGCATTGCTGATCCCATGGCTCCCTGTTGGCCGCCTGTGATCATGTCCGGTGTGCGTAGAATAT
CATTATATTTAGTATAAGTTATCAAGGTATAATTTTCAACAACTTCTTTTCCTCGGGTTAAAGTTACCGTAGTGTTTGGA
CGTAGGTTATTAGGTATGTGGTCAAAAATTGTCATGCCATCAAACACATTATTAACCGTTGCGGTAAGGGTGGCTCCTCT
CTGCATCCACGTGGGCACAAAGGATTAGCCAGGCCATTATGTCGTTTCCATTGTT
>chr3B_511
ACT-----------------------------------------------------------------------------
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---------------------------------CATGTCTCACCCGGCGGACAGAAGACGTCGTTGAGGAATACGCCGAG
GCTAGTGTATTGAACGGTGAAAATTAA-TTTTTCATTTATATCTCTTGCTCATTTTCTCCTAGAAATAATCCTCTAAATT
TAGAAGCTATATTATTACCGTTA-TTTCATTTTACCATACCTACAGATTTT-GGCTCATCAGCTGCCCATATATGTGCAG
AGCGAGTGAATTGCAAGAAACCACCACATTTGGGGCTTATCTTGCAGAAAACCACCTGGTCTCTAATCATTTACAAAAAT
CACCGCGCATTCAGTAAACATTTTGCAAAAAGCACTGAACAGGTGATTTAGCCCGTTTAACCATTTTCTGACTAGTGGGG
CCGGATTGTAAGGAGCTGATTTGGCAACAAATTGACATATACCTCCCTGGATCTTATAAAAGAAAAGCAATCAAGCCCCC
CTCCCCCACGGAGGGCATCTCATTGCTCTCGCCGGGAAGAACCAGGACGGCGGCGGCTGGGCGGAGCTGCAGGCGAGGAA
CGGCAGCGCGGCGGCGGGATCCGCTGAGCGCCGCAGGTGCTGCTCGCCGCTGTGTGCTGCGGCTGCTGCTGGTCGCCGTC
ACAAGGTCCTGGTCGCTGCGGCTGCCCGCGACAGCTGCTGCACGCCGCAGCTCCCCTGCCATGGCCGTCGCTGAGCAGTG
TGGCTCCTAGGCCTAGGCGAGTCGGGGTCGTAGACCGGCGCGGCCGTGTGGTCCATGGCTTGCCGGAGCTTCAAAGCGCG
ACCCGGGCGTGCCGAGCAGGAGGCCGAGGCGTTGTGCCGCGGGCACGCCGAGCAGGAGGCCGTGGGGCTATGCCGTCGGC
ACGGCGACCTAGCTCGCGGTCACCATCCGTCACCGCGACGCGCTCGAGGGCGGGCACGCCGCGCTCTATTGGTCCCTCCT
GCCCATCTCCTCCCTGCTCCACCTCCTCCTCATCTCCGTGTCGGCCTTGCCGGGGCTCACGCTCCACCTCCTCCTCATCC
CGGCGTGTCGGCCGAGCTCGCGCTGCTTCGACAGTAGCGCTGCTCCACCGGGGAGGGTTTGATTGCTTTTCTTTCTTAGA
TATAGGGGGGTATGTGTTAATTGTTTGCTGAGTCAACTCCTTACAACCGGGTCCCACTTGCCAGAAAGTGATTAAACAGG
CTAAATTGTCCCATCAGTGTTTTTTGCAAAATGTTTACTGAATGCGCGGTGATTTTTGCAAATGATTAGCGACCAGGTAG
TTTTCTGCAAGATAAGCCCCAAATGTGGTGGTTTCTTGCAATTCACTCGTGCAGAGCTAATGTTAGCGTGAA-ATGTCAT
CTCGGGATGAAAATTCTGGTGTCTTTGTATATGTGCAATCTATTTCATTCCACAGTTGTTGTATAATACTTTGTATGAGA
AGACCTTCGTACTTTCATGTTTTTTTACCTGC------------------------------------------------
------------------------------------------------ATACTTTTATTCAATGACTCCATAATTTGCTT
GTAAGAAAGGTACCACATGTTTGTGTGTTTTACATATTTTCTTTTATATATGTCTTGTA--------TCAG-------TC
TGCACTACAAAATCTAAATATCAGAATATTTCAGTTACAATATTATGTTGCTATTCGGCTATATTAACAAATTAGCAGAA
AAGGAGCAGAAAACTGGTTTGGGTACAGCCATAGACAAGTAGAGA--------CCACACACAGAGTGACACGGAGACAGA
ATCCGAGAATTCGGATAAGGGATAGGATTGCAGCCAATGAAAGCCACACAGCTCCGGACCATATCTCGTATGCAGGGGCC
CGCCCAACAAGAGCCAGATTCCCCCCTCTCCCTTGGAGCCACTAAAACATCTTGCCATCCTGACAAATCTTCTTGCTGTA
ACACATCCATCCATTTGTAGCTGCAGGCAGAGCAGAGTTGTGCGTGTGGGAGTTGAAGGAGATCGAGATGGCCACAGCAT
ATGCTCCTCCGATGGCGAGCCAGGTGATGAAGAGCGGCTTGGTGTGCTCCAAGCCGCGGGGCATGTCCGGCGCTTCGCTC
ACCAGGAGGCCCCGCCTCGTCGTCAAGGCCGTCAAGTCTGACAAGGTCCGTTGCAATTGCA----AGAGATAGACAAAAT
TAAGCGATTCAGCACACTTTTCCTTTGTTC-------CAAGTCTTCGTGTATCTCATACATATTCTTGTGTCTCCTGTCT
CTTCTACAAACAGCCGACGTACCAGGTGGTCCAGCCCATCAACGGCGACCCATTCATCGGCAGCCTGGAGACGCCCGTCA
CCTCCAGCCCCCTCGTCGCCTGGTACCTCTCCAACCTCCCCGCCTACCGCACCGCCGTCAGCCCGCTCCTCCGCGGCATC
GAAGTCGGCCTCGCCCACGGCTACCTCCTCGTCGGCCCCTTCGCGCTCACCGGCCCGCTCCGCAACACGCCAATTCACGG
CCAGGCAGGCACTCTCGGCGCCATCGGCCTCGTCTCCATCCTTAGCGTCTGCCTCACCATGTACGGTGTCGCGTCCTTCA
ACGAGGGCGCACCGTCAACCGCGCCCGCACTCACGCTCACAGGCCGCAAGAAGGAGGCCGACAAGCTGCAGACCGCTGAA
GGGTGGTCGCAGTTCACCGGAGGCTTCTTCTTCGGTGGTGTCTCCGGTGCCACCTGGGCCTACTTCCTCCTCTACGTGCT
CGACCTCCCATACTTCTTCAAGTAGATTA-----ATTATCGGCATGCATGTACGATGGGTGCA--------GATCATGT-
---GATCTCTTCTCGATGGCGGTTGCTTCAAAGAGTCCATGTATAAATGAATTTACACATTCCTCACAATCTTTGCATGG
ATCGATCATACTACGATACTATAACATGCGAATTGCTAATTTCTTAAATAATGCGTGCATAAACAAAACCCAATAAGAAA
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>chr3A_514
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---------------------------------CATGTCCACCGCAGCGGCCGGAAACCGTCATTGAGGAACGCGCGGAG
GCTAGTGTATTGATCGGTGAAAATAAA-ATTTTCATTTACATATCTTCCTCATTTTCGCCTAAT--TAAGCCTCTAAAGG
AAGAAGCTATATTATTAGCATTTTTTTCATTTTACCATACCTACAGATTTTTGGCTCACCAGCTGCCTATAGATGTGCAG
AGC-----------------------------------------------------------------------------
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---------------------------------------------------------TAATATAAGCGTGAAGATGTCAT
CTCGGGATGAAAATTCTGGTGTCTTTGTATATGTGCAATCCATTTGAACTCCACAGTAGTGTATAATACTTCCTCCATTT
AATATATAAGTCTTTTTAGAGATTTTAATACGGACTACATACGAAAGTATGTAGACATATTTTAGAGTATAAGTTCACTC
ACTTTGCTCCGTATATAGTCCATATCGAAATCTAGGTATATAGTCCGTATACTTTTATTTGATGGCTCCATAATTTGCTT
GTAA-AAAGGCAGCACATGTCTCTGTGTTTTACATATTTCATTTTATAT--GTATTGTA--------TCAGTCTGCACTC
TGCACTACAAAATCTAAATAGAGGAAAAATC-------------------------------------------------
-----------------------TACAGCCATAGACAAATAGAGAGTTAGAGACCACACACACAGTGACACGCAGACAGA
ATCTGAAAATTCGGATAAGAGATAGGATTACAGCCAATGGAAGCCACACAGCTGCGGACCATATCTCGTGTGCAGGGGCC
CGCCCAACAAGAGCCAGATTCTCTCCTCTCACTTGGAGCCACTAAAACATATTGCCGTCCGGACAATTCTTCTTCCTGTA
ACACATCCATCCATTTCTAGCTGCAGGCAGAGCAGAGTTGAGCGTGTGGGAGTCGAAGGAGATCGAGATGGCAACTGCAT
ATGCTCCTCCGATGGCGAGCCAGGTGATGAAGAGCGGCTTGGTGAGCTCCAAGCCGCGGGGGCTGTCCGGCGCCTCACTC
ACCAGGAGGCCCCGCTTCGTCGTCAAGGCCGTCAAGTCTGACAAGGTCAGTTGCAATTGCATGGAAGAGAGAGCTAAAAT
TAAGCGATTCACCACACT-----------------------------TGTATCTCATACATATTCTTGTGTCTCCTCTCT
CTCCTACAAACAGGGGACGTACCAGGTGGTCCAGCCCATCAACGGCGACCCGTTCATCGGCAGCCTGGAGACGCCCGTCA
CCTCCAGCCCCCTCGTCGCGTGGTACCTCTCCAACCTCCCCGCGTACCGCACCGCCGTCAGCCCGCTCCTCCGCGGCATC
GAGGTCGGCCTCGCCCACGGCTATCTCCTCGTCGGCCCCTTCGCGCTCACCGGCCCGCTCCGCAACACGCCAATTCACGG
CCAGGCGGGAACCCTCGGCGCCATCGGCCTCGTCTCCATCCTCAGCGTCTGCCTCACCATGTACGGCGTCGCCTCCTTCA
ACGAGGGCGCGCCCTCCACCGCGCCCGCGCTCACGCTCACCGGCCGCAAGAAGGAGGCCGACAAGCTGCAGACTGCGGAA
GGCTGGTCGCAGTTCACCGGAGGCTTCTTCTTCGGCGGTGTCTCGGGCGCCATCTGGGCCTACTTCCTCCTCTACGTGCT
CGACCTCCCATACTTCTTCAAGTAGATG------ATTATTGTTTGGCATGTACGATGGGTGCA--------GATGATGT-
---GATCTCTTCT---TGATGGTTGCTTGAAAGAGTCTATGTATAAATGAATTTACGTATTCCTCAGAACCTTTGCATGG
ATGG-------------------------GAATGTTTAATTTCTATAATGGTGCGTGCATAAACAAAACCCAATCAGAAA
CATCTTAGGACCGTGCTAACTTCCGACACTGATCGAAAGATAGGCAACATATGCGAACGCCTACTTCTTTCTCTAATCAC
ACATGCATGCAAGGCTTAAGAGCTAATCGGTGTGTGGTTGCCGAAGA-GGAAGCATGCAACTAGCCTTGACTTATGATTC
CATACGTGCATGCAAACTAAAAGACAAAACAGATAATATCAGCAAAAGATT-TTTCTATTTTGAAACTTTAGAATTTTTT
GTGGCTCAAACTTTTGCTCCGATTGAAAAACCGTTTTCACGTAAAAAATCATCGTGACGAGAGCTTTGAAAATAGATC--
ATGTTGGTATGTTTCGATGACTTTTTTTAAATC--AAAAGTTACCACGTTGGACTACGAGCATGCTTGGATACGTTTTAG
TCCCATGACTAAAAGTAGTGGGACTAAAACTTGCTAGTCTCACCCATGCTTGGATCCAAGTACTAAAGAGACTAAAATCT
AGTTATTGAGCATTTATTATCCTCCAAACCCTCCAATCCAGAACTAAGGAGAGGAATTAAATAAGGAGAGAGAGAGCTAA
TACATATTTTAGTAGGTTTCCCATGACTAAAAGATTTTAGCCTCAAGACTAGTTCTAGCCTCTCTTTAGTCAGGGGTGCT
TGGAACTTTAGCCTCTAAAAGAGACTATTTTTAGTCAGACTAAAAATAGTCCCTTGTATCCAAGCACCCTCTACGTAAGT
TATCACGCTTGCAATACATAACTTATCATGGTGTTTACACTGAACTTATTAGGGGTATGTTTCAACTACTTTTTTGCCTG
GGTAAAAAATTACCATGACATTTGTATGTTAACTATCAGTTCTGCAATACCACATTCTAGCACCGATGTCGTGCCCAGGC
CGCAAGGTGAGGTCCATGTGCACACGCGGTAAAGGCTTGCTTATGAAACATCACTTTGGGACCTGTGTCATGTCAGGCCA
GTTTAGGCGTGTGTTGGGCCAGGGTGATCCCATTCCGGTCCGTTGGCCGCCTATGATCATGTCCGATGGGCGTAGAATAT
CATTCTATATAGTATAAGTTATCGAGATATATTTTTCAACAACT------------------------------------
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>chr3B_1391
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--------AACAGGCCACGTACCAGGTGGTCCAGCCCATCAACGGTGACCCGTTCATCGGCAGCCTTGAGACCCCCGTCA
CCTCCAGCCCCCTCGTCGCGTGGTACCTCTCCAACCTCCCCGCGTACCGCACTGCCATCAGTCCGCTCCTCCGTGGCATC
GAGGTCGGCCTGGCCCACGGCTACCTCCTCGTCGGCCCCTTTGCGCTCACCGGCCCGCTCCGCAACACGCCGATTCACGG
CCAAGCAGGCACTCTCGGCGCCATCATCCTCGTCTCCATCCTCAGCGTCTGGCTCACCATGTACGGCGTCGTGTCCTTCA
ACGAGGGCGTGCCCTCCACCGCGCCCACCCTCACGCTCACCGGCCGCAAGAAGGAGGCCGACAAGCTGCAGACGGCAGAA
GGGTGGTCCCAGTTCACCGGAGGCTTCTTCTTTGGCGGTGTCTCCGGCGCCATCTGGGCCTACTTCCTCCTCTACGTGCT
TGACCTCCCATACTTCTTCAAGTAGGTTATATTTATTATTGGCATGCATGTACGATGGGTGCACAACTGCAGATGATGT-
---GATCTCTTCT---TGGTGGTTGCTTGAAAGAGTCTATGTATAAATGAACTTACGTATTCCTCACAATCTTTGCATGG
ACGAT---------------------------------------------------------------------------
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S--------------S--------------------
--------------S------------S-----S----------------------S-----------------------
-----------------S--------------------------------------------------------------
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-----------------------------------------------------------SSSSSSSS-------------
-----------------------------------------S--------------------------------------
-S------S-----------------------------------------------------------------------
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-------------S---------------S--------------------------------------------------
------------------------------------------------------------------------S-------
----------------S---------------------------------------S----S------------------
--------------------------------------S------------------------S----------------
------------------------------SSSSSSS---------S---------------------------------
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-S-----------------------------------S------------------------------------------
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----------------------------------------------------------------------------S---
--------------------------------------S-----------------------------------------
-------------------------------------------------------------------------------S
SSS----------------------S------------------------------------------------------
------S-----------------------------------------S-------------------------------
----------------------------------------------------SS--------------------------
----S--------S--------------S-----SS--S-----S--S---S------------S--------------S
-----S----------S-----S-----SS----S--S-S-----S-S-S-S--S------------SS--S---S----
--S---------S-SS--S-S--S----------------S--------SS-S-S-S---------S-----------SS
-----S-----------S---------SS-SSSSS---S------S----------------------------------
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---S----S----S--SS------S-----S------S------S--SSS-------------S----S----S------
--------S---------S------------------------------S------------S--S--S----S-SS---
--------S-----------S----S---SS--------------------S------S---S-------S-S-------
-------------S-----SSS-S---------SS-SSS-S-----------S------------S--S-----------
----S---S--------------S--S----S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_373
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---------------------------------AGTGTTGTGAGGTGTTGCCA---------------------------
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>reverse_3648
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-----------------------------------------------GGGACGCATGCAACTAGTCT-------------
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-------------------------------------------------------
