>input_sequence_63433
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-------------------------TA--TTGGAGAACACACAGGGACAACACACCATAAGTGCAGCGCAATGGCGGCCA
CCACCATGTCTCTTTCCTCTTGGTCCTTCGCCGGCAAGGCCGTCAAGAACTTGCCCTCGTCGGCTTTCATTGGTGAGGCA
CGTGTGAACATGCGCAAGACCGCCGCGAAAGCCAAACAAGTTTCATCTAGAAGCCCGTGGTACGGCTCTGACCGTGTGCT
CTACCTCGGCCCGCTTTCCGGCGAGCCCCCCAGCTACTTGACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACCGCCG
GTCTCTCGGCTGACCCTGAGACCTTCGCCAAGAACCGGGAGCTTGAGGTGATCCACTGCCGATGGGCCATGCTCGGTGCG
CTTGGTTGTGTCTTTCCTGAGTTGCTTGCCCGCAATGGTGTGAAGTTTGGCGAGGCCGTCTGGTTCAAGGCTGGCTCTCA
GATCTTCAGCGAGGGTGGCCTCGACTACCTTGGCAACCCCAGCCTCGTCCACGCTCAGAGCATCCTCGCCATCTGGGCTT
GTCAAGTTGTGCTCATGGGTGCCGTTGAGGGGTACCGCATTGCTGGTGGT------------------------------
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--------------------------------------------CCGCTCGGCGAGATAGTCGACCCACTCTACCCTGGT
GGCAGCTTTGACCCGCTTGGCCTGGCCGACGACCCCGAGGCATTTGCGGAGCTCAAGGTTAAGGAGATCAAGAATGGCCG
CCTCGCCATGTTCTCCATGTTTGGCTTCTTTGTGCAGGCCATTGTCACCGGCAAGGGCCCATTGGAGAACCTTGCCGACC
ACATTGCTGACCCTGTCAACAACAACGCGTGGGCATTCGCCACCAACTTCGCGCCGGGGAAGTAAGACATGAATGATGGT
TGGGAGTTGTATGTGAGTGTCAGTTGAATTGTAACACCAACATGTAAAATATGAGAATTGTGTGCAAAGACATTGTT---
-------------------------TGATTGGTCCACTCCGGAAGTGCCCCTGCTCCCCGTCTTGTTTTCATAAATCACT
AAGCACTCA-----------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G403800
ATCAACTTGGTCTTCCTATCCACACATGTTTCACTGGTTTGCCCTGGGTTCCGCCGTACCTCTAGTATTTTTCAGGGG--
------------------------------------------------------ATGGACAATCACAAGGGGCAAAGAAA
CACATATTTACTCTTGTAGTCATGTCATGTGTGTGCCGACCGTATGAAAAT-TTTCTGAAACGATCAAACTCAGCGTGCA
GTCGCCAGATATCAATTTTTTTTTGAAACAGAGACAAAATATTTGCCTAATCAGTTAATTAAGCATAAAA-AATTGCCCA
GTTAATCAATAAAAAATCATGG--AAAAACCGACACAAACCCATCACATGTGAACTACCCACAAAACATGCAACTCCATA
AACGCATGATCAGTCCAACAATCAAACCCAACACGCAATGACCACCAACCCTCACACCAGTGGCGGAGCTACAACAGCAA
ACCTGGGTGGGCCATTACAAAGAAAGCTAACTATTTTTGCTAGCATGGCCCAATTTACCCATCAATCTTCATTAAACTTG
CTAGAGGATGTGCAGACTATAGCCTACTTTGCTAACACATAGATCCGCCAGTGCTCCACACTGCTAGTACATCGCAAAGA
AAACATGCAAGAAGATGC----GGCACGATCAGCCATATATCAAATTTGTTGGGCAAGCTCCCAGTGTGATGTACGTTGG
GAAAACATGCAAGAGGATGCGGCCAAATGGACTGGTAAACCATCCCGTGCCCGTGGCCTACACTTTTTAAACCTGCGGTC
TCTTTCGACTTGTCTAACTAAAGCTGGTCCAGTCACGAGCCTTAGCCCTAACCATAGCCACAAGTACATCTCATCCATTT
AAGGCCTCTGGCTGCACCAATGGCATCCAAGCTGCAGATTTCTTTTCACCACCGTCTCTCTTGTCAGCTGTCAGCAAACA
CCAATCAATTAATTTCTCTATATTCTTGTTCCCTCAAGGCTCAAGCTCTTTAAATAGCTCCCTACAATCTCC-TCTTAAA
CCATCTCCACACACTCAGGCCACACTA--TTGGAGAACACACAGGGACAACACACCATAAGTGCAGCGCAATGGCGGCCA
CCACCATGTCTCTTTCCTCTTGGTCCTTCGCCGGCAAGGCCGTCAAGAACTTGCCCTCGTCGGCTTTCATTGGTGAGGCA
CGTGTGAACATGCGCAAGACCGCCGCGAAAGCCAAACAAGTTTCATCTAGAAGCCCGTGGTACGGCTCTGACCGTGTGCT
CTACCTCGGCCCGCTTTCCGGCGAGCCCCCCAGCTACTTGACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACCGCCG
GTCTCTCGGCTGACCCTGAGACCTTCGCCAAGAACCGGGAGCTTGAGGTGATCCACTGCCGATGGGCCATGCTCGGTGCG
CTTGGTTGTGTCTTTCCTGAGTTGCTTGCCCGCAATGGTGTGAAGTTTGGCGAGGCCGTCTGGTTCAAGGCTGGCTCTCA
GATCTTCAGCGAGGGTGGCCTCGACTACCTTGGCAACCCCAGCCTCGTCCACGCTCAGAGCATCCTCGCCATCTGGGCTT
GTCAAGTTGTGCTCATGGGTGCCGTTGAGGGGTACCGCATTGCTGGTGGT------------------------------
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--------------------------------------------CCGCTCGGCGAGATAGTCGACCCACTCTACCCTGGT
GGCAGCTTTGACCCGCTTGGCCTGGCCGACGACCCCGAGGCATTTGCGGAGCTCAAGGTTAAGGAGATCAAGAATGGCCG
CCTCGCCATGTTCTCCATGTTTGGCTTCTTTGTGCAGGCCATTGTCACCGGCAAGGGCCCATTGGAGAACCTTGCCGACC
ACATTGCTGACCCTGTCAACAACAACGCGTGGGCATTCGCCACCAACTTCGCGCCGGGGAAGTAAGACATGAATGATGGT
TGGGAGTTGTATGTGAGTGTCAGTTGAATTGTAACACCAACATGTAAAATATGAGAATTGTGTGCAAAGACATTGTT---
-------------------------TGATTGGTCCACTCCGGAAGTGCCCCTGCTCCCCGTCTTGTTTTCATAAATCACT
AAGCACTCATTGGTAGTTATTCCTAACAGAATATCCATAACTTGTGATGACACATACAATTAGCGTTGGGGAGCCCCTCT
-ACTTGCCTGCTTGCTGACATTGTCGAGTGTCAAGTGGATTGTTTGTGGTGATGTGATTGCTCTTCTCCTCTGGTGGTGT
CTTCTTCGGGTGTGGTTCCATGCTGCCGGAGTTTTCCTTCTGCGATTACGGTGGTTGGTGAGCACAGTGAAGCGATCTGG
GTGTAGACACG-GCTCCTTGTCGTCCTTCGGCTTCGCCAGCGGTGCCGCTATTGTGTTGTAGACTCGGATGTGTGTGACT
CTTTGTCCAGATGTGGACTTGGTCGCTCATTGCTCTTCGGCTACACCAATAGCCTTGAGGCATCATAGATGGTCTCGTTT
TCTTTTGCACCGGTGGATGGTCTCGGTTGAGTTGGACCTCTTTGTCTGCAGTGGTGGTGTTCTCATGCAGCCTTCCGTTC
GCGAGGACGATGGAAGACGAGGGCATTCCGGTCCTTTTCTTTTCTTTT-----TCCCTTCTATTGTGTCAGGTGTAATCT
ATTTCCTCTCATCGCTGTACTCCTCTGTGATTTCCCGGCTTTGCCGGTGCCTTCTTAATGAATGAAAAGTAGCGCTGGTA
CGTTTCATAAAAAAA--------------------ACAATTAGCTATATGGATCCAATTCACCTGCAAAAAA-AAGAAGT
TATACGGATCCAATTAGCCCAGTTTAAACCTCTAATTTTGTGTCTAACGATCATTCAACACGCTCTCTGTCAGCCTCAGA
ATCAACCCCAAGCTTTCCATTCTAATCCTCATACACCCTTTCATTTCTGCTTGGCCCAACTCTTCTCATACATCCTTCTG
AAAAAAATAAAAAAAATCTCCCATACATTGACTAAAAAGTTACTTTATCTATAGCTTCCAATTTGTTTGATTTGATTTCC
TCGGCTATGATTCTCTCTCGTATTATTTCATACCGGTAACTGTAGGCAGGGAAGAAATCCAAAGAGTCCCATTTTTT
>chr1B_1
ATCCACTTGGTCTTCCTATCCACACATGTTTCACTGGTTTGCCCTGGGTTCCGCCGTACCTCTAGTGTTTTTCAGGGGTT
GGACAATCACAAGAGGCAAAGAAACACATATTTACCTCTAGTATTTTTCAGGGAATGGACAATCACAAGAGGCAAAGAAA
CACATATTTACTCTTGTAGTCATGTCATGTGTGTACTGACCGTATGAAAAAATTTCTGGAACGATCAACGCCAGATAACA
AAT------------TTTTTTTCTCAAACGGAGACAAAATATTTGCCTAATCAGTTAATTAAGCATAAGAGAATTATTCA
GTTAGTTAATGAAAAATCAGAAAAAAAACACGACACAAACCTATCACACGCG--------------CATGCAACCCCATA
AAAGCACGATCACTCCGACAATCAAACCCAACA-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GGCAAAGA
AAACATGCAAGACGATGCAAGTGGCACGATCAGCCAGATATCGAATTTGTTGGGCAAGCGCCCAGTGTGATGTACGTTGG
GAAAACTTGCAAGAGGATGCGACCAAATGAACTGGTAAACCATCCCGTGAGCGTGGCCTACACATTTTAAGCCAGCGGTC
TCTTTCGACTTGTCTTACAAAAGCTGGTCCAGTCACGAGCCTTAGCCCTAACCATAGCCACAAGTACATCTCATCCATTT
AAGGCCTCTGGCTGCACCAATGGCATCCAAGCTGCAGATTTCTTTTCACCACCGTCTCTCTTGTCAGCTGTCACCAAGCA
CCAACCAATTAATTTCTCTATATTCTTGTTCCCTCAAGGCTCAAGCTCTTTAAATAGCTCCATACAATCTCC-TCTTAAA
CCATCTCCACACACTCAAGCCACACTA--TTGGAGAACACACAGGGACAACACACCATAAGTGCAGCGCAATGGCGGCCA
CCACCATGTCTCTTTCCTCTTCGTCCTTCGCCGGCAAGGCCGTCAAGAACTTGCCCTCGTCGGCTCTCATTGGTGACGCA
CGTGTGAACATGCGCAAGACTGCGGCGAAGGCCAAACAAGTTTCGTCGAGCAGCCCGTGGTACGGCTCTGACCGTGTGCT
CTACCTCGGCCCGCTTTCCGGCGAGCCCCCCAGCTACTTGACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACCGCCG
GGCTCTCGGCTGACCCTGAGACCTTCGCCAAGAACCGGGAGCTCGAGGTGATCCACTGCCGATGGGCCATGCTCGGTGCG
CTTGGTTGTGTCTTTCCCGAGTTGCTTGCCCGCAATGGTGTGAAGTTCGGCGAGGCCGTCTGGTTCAAGGCTGGCTCTCA
GATCTTCAGCGAGGGTGGCCTCGACTACCTTGGCAACCCCAGCCTCGTCCACGCCCAGAGCATCCTCGCCATATGGGCTT
GTCAAGTTGTGCTCATGGGGGCCGTTGAGGGGTACCGCATTGCTGGTGGT------------------------------
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--------------------------------------------CCGCTCGGCGAGATCGTCGACCCACTCTACCCTGGT
GGCAGCTTTGACCCACTTGGCCTGGCCGACGACCCCGAGGCATTTGCGGAGCTCAAGGTTAAGGAGATCAAGAATGGCCG
CCTCGCCATGTTCTCCATGTTTGGCTTCTTTGTGCAGGCCATTGTCACCGGCAAGGGCCCATTGGAGAACCTTGCCGACC
ACATTGCCGACCCTGTCAACAACAACGCGTGGGCATTCGCCACCAACTTCGTGCCCGGGAAGTAAGACAGGATTGATGGA
TGCAAATTGTATGTGAGTGTCAGTTGAATTGTAACACCAACATGTAAACTATGAGAATTGTGTGCAAAGACATTGTT---
-------------------------TGATTAGTCCACTCCGGAAATGCCCCTGCTCCCCGTCTTGTTTTCACAAGTCACT
AAGCACTCAATGGTAGTCATTCCTAACAGAATATCCATAACTTGTGATGACAAATACAATTAGCGTTGGGGAGCCCGAAG
AACTTGCCTGCTTGCTGACATTGTCGAGGGTCAAGTGGATTGTTTGTTGTGATGTGATTGCTCTTCTTCTCTGGTGGTGT
CTTCTTCAGGTGTGGTTCCGTGCTGTCGGAGTTTTCCTTTTGCGATTACGGTGGTCGGTGAGCACAGTGAAGCGATCTGG
GTGTACACTCAAGCTCCTTGTTGCCCTTTGGCTTCGCCGGCGGTGCCGCTGTTGTGTTGTAGACTC--ATGTGTGTGACT
CTTCGTCCGGGTGTGAACTCGGTCGCTCATTGCCCTTCGGCTACACCAATAGCCTTGAGGTAACA---------------
-------------TGGATGGTCTCGGGTTGATTGGAGCTTTTGGTCTGCAGTGGTGGTGTTCTCATGCAGCCTTCCGTTC
GCGAGGACGATGGAAGATGATGGCATTCCGGTCCTTCCCTTTTCTTTTCTTTTTCCCTTCTATTGTGTCAGGTGTAATCT
ATTTCCTCTCATCCCTCTATTCCTCTGTAATTTCCCGGCTTTGCCAGTTCCTTCTTAATGAATGAAAAGTAGTGCTGGTA
TGTTTCGTCAAAAAAAAAAAAACACACAAACAAATACAATTAGCTATATGGATCCAATTCACCCGCAAAAAATAAGAAGT
TATATCGATCCAATTAGCCCAGTTTAAACCTCTAATTTTGCGTCTAACAATCATTCAACGCGCTCTTTGTCAGCCTCAGA
ATCAACCCCAAGCTTTCCATTCTAATCCTCATACACCTTTTCATTTCTGCTTGGCCCAACTCTTCTCATACATCCTTCTA
AAAACAAA------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr1D_1
ATCAACTTGGTCTTCCTATCCACACATGTTTCACTGGTTTGCCCTGGGTTCCGCCGTACCTCTAGTATTTTTCAGGGGTT
GG--------------------------------------------------------ACAATCACAAGAGGCAAAGAAA
CACATATTTACTCTTGTAATCATGTCATGTGTGTGCCGACAGTACGAAAAT-TTTCTGGAACGATCAAACCCAGCGTTAA
GTCGCCAGATATTAATATTTTTTTGAAACGGAGACAAAATATTTGCCTAGTCAGTTAATTAAGCATAAGAGAATTGTCCA
GATAGTTAACGAAAAATCTGGAAAAAAAACCGACACAAATCCATCACACGTGGACTACTCACAGAACATGCAACCCCATA
AAAGTACGATCACTCTGACAATCAAACCCAACA-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CGCAAAGA
AAACATGCAAGAAGATGC----GGCACGATCAGCCAGATATCAAATTTGTTGGGCAAGCGCCTAGTGTGATGTACGTTGG
GAAAACTTGCAAGAGGATGC--------------------CATCCCGTGCCCGTGGCCTACACATTTTAAGCCAGCGGTC
TCTTTCGACTTGTCTTACAAAAGCTGGTCCAGTCACGAGCCTTAGCCCTAACCATAGCCACAAGTACATCTCATCCATTT
AAGGCCTCTGGCTGCACCAATGGCATCCAAGCTGCAGATTTCTTTTCACCACCGTCTCTCTTGTCAGCTGTCAGCAAACA
CCAACCAATTAATTCCTCTATATTCTTGTTCCCTCAAGGCTCAAGCTCTTTAAATAGCTCCCTACAATCTCC-TCTTAAA
CCATCTCCACACACTCAAGCCACACTA--TTGGAGAACACACAGGGACAACACACAATAAGTGCAGCGCAATGGCGGCCA
CCACCATGTCTCTTTCCTCTTCGTACCTCGCCGGCAAGGCCGTCAAGAACTTGCCCTCGTCGGCTCTCATTGGTGAGGCA
CGTGTGAACATGCGCAAGACTGCCGCGAAGGCTAAACAAGTTTCGTCGAGCAGCCCGTGGTACGGCTCTGACCGTGTGCT
CTACCTCGGCCCGCTTTCCGGCGAGCCCCCCAGCTACTTGACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACCGCCG
GGCTCTCGGCTGACCCTGAGACCTTCGCCAAGAACCGGGAGCTTGAGGTGATCCACTGTCGATGGGCCATGCTCGGTGCG
CTTGGTTGTGTCTTTCCCGAATTGCTTGCCCGCAATGGTGTGAAGTTTGGCGAGGCCGTCTGGTTCAAGGCCGGCTCTCA
GATCTTCAGCGAGGGTGGCCTCGACTACCTTGGCAACCCCAGCCTCGTCCACGCTCAGAGCATCCTCGCCATCTGGGCTT
GTCAAGTTGTGCTCATGGGGGCTGTTGAGGGGTACCGCATTGCTGGTGGT------------------------------
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--------------------------------------------CCGCTCGGCGAGATCGTCGATCCACTCTACCCTGGT
GGTAGCTTTGACCCGCTTGGCCTGGCCGACGACCCCGAGGCATTTGCCGAGCTCAAGGTTAAGGAGATCAAGAATGGCCG
CCTCGCAATGTTCTCCATGTTTGGCTTCTTTGTGCAGGCAATTGTCACCGGCAAGGGCCCATTGGAGAACCTTGCCGACC
ACATTGCCGACCCTGTCAACAACAACGCGTGGGCATTCGCCACCAACTTCGTGCCCGGGAAGTAAGACAGGAATGATGGA
TGCGAATTGTATGTAAGTGTCAATTGAATTGTAACATCAACATGTAAATTATGAGAACTGTGTGCAAAGACATTGTTTTT
TTTGCGTGGGTGCAAAGACATTGTTTGGTTGGTCCACTCCGGAAGTGCCACTGCTCCCCATCTTGTTTTCACAAATCACT
AAGCACTCATTGGTAGTCATTCCTAACAGAATATCCATAACTTGTGATGACAGATACAATTAGCGTTGGGGAGCCCCTCT
-ACCTGCCTGCTTGCTGACATTGTCGAGGGTCAAGTGGATTGTTTGTTGTGATGTGATTGCTCTTCTTCTCTTGTGGTGT
CTTCTTCGGGTGTGGTTCCGTGCTGCCGGAGTTTTCCTTCTGTGATTACAGTGGTCGGTGAGCACAGTGAAGCGATCTAG
GTGTACACTCG-GCTCCTTGTTGCCCTTCGGCTTTGCCAGCGGTGCCGCTGTTGTGTTGTAGACTCGGATGTGTGTGACT
CTTCGTCCGGGTGTGGACTCGGTCGCTCATTGCCCTTCGGCTACACCAATAGCTTTGAGGCATCATGGATGGTCTCGGTT
-----------------------------GATTGGAGCTCTTGGTCTACAATGGTGGTGTTCTCATGCAGCCTTCCGTTC
GCGAGGACTATGGAAGATGATGGCATTCCGGTCCTT----------TTCTTTTTCCCTTCTATTGTGTCAGGTGTAATCT
ATTTCCTCTCATCCCTGTATTCCTCTGTAATTTCCCGGCTTTGCCGGTTCCTTCTTAATGAGTGAAAAGTAGTGCTGGTA
CATTTCGTCAAAAGAAAAGAAA-------ACAAATTCAATTAGCTATATGGATCCAATTCACCTGCAAAAACAAAG-AGT
TATATCGATCCAATGAGCCCAGTTTAAACCTCTAATTTTGCGTCTAACGATCATTCAACACGCTCTCTGTCAGCCTCAGA
ATCAACCTCAAGCTTTCCATTC--------ATACACCCTTTCATTTCTGCTTGGCCCAACTCTTCTCATACATCCTTCTA
AAAACAAAACAAAAAATCTCCCATACATTGACTAAAAAGTTACTTTATCTGTACCTTCCAATTTCTTTGATTTGATTTCC
TCGGCTATGATTCTCTCTCGTTTTATTTCATACCGGTGACTGTGGGCAGGGAAGAAATCCAAAGAGTCC--------
>chr1A_935
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--------------------------------------GCTCCAGTTCCTTAAATAGCTCCATCCTCCACACGTCTCAAA
CCATCTCCACACTCTTCAGTTTTCATTGTTTGGAGAACACACAATACACCTCCCACCT-TA-GCAGCGCAATGGCGACCA
CCACCATGTCCCTCTCCTCGA---CCTTCGCCGGCAAGTCGGTGAAGAACGTGGCTTCATCAGCTCTCTTTGGTGAGGCC
CGTGTCACTATGCGCAAGACCGCTGCAAAGGCCAAGCCGGTTTCATCAGGCAGCCCATGGTACGGTGCCGACCGTGTGCT
CTACCTCGGCCCGCTTTCCGGAGAGCCCCCGAGCTACTTGACCGGCGAGTTCCCCGGCGACTACGGATGGGACACCGCCG
GGCTCTCGGCCGACCCCGAGACCTTTGCCAAGAACCGGGAGCTCGAGGTGATCCACTGCCGGTGGGCCATGCTCGGTGCG
CTTGGATGCGTCTTCCCCGAGCTTCTTGCACGCAACGGCGTCAAGTTCGGCGAGGCGGTATGGTTCAAGGCCGGTTCCCA
GATCTTCAGCGAGGGTGGCCTCGACTACCTGGGCAACCCCAGCCTCGTGCACGCACAAAGCATCCTTGCTATCTGGGCAT
GCCAAGTCGTGCTCATGGGCGCTGTTGAGGGGTACCGCATTGCTGGCGGC------------------------------
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--------------------------------------------CCACTCGGTGAGGTAGTCGACCCACTCTACCCCGGG
GGCAGCTTCGACCCACTGGGCTTGGCTGACGATCCAGAGGCATTCGCGGAGCTCAAGGTGAAGGAAGTCAAGAACGGTCG
CCTCGCCATGTTCTCTATGTTTGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCACTCGAGAACCTCGCTGACC
ACCTCTCCGACCCTGTCAACAACAACGCATGGGCGTTTGCCACAAACTT-------------------------------
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>chrUn_935
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--------------------------------------GCTCCAGTTCCTTAAATAGCTCCATCCTCCACACGTCTCAAA
CCATCTCCACACTCTTCAGTTTTCATTGTTTGGAGAACACACAATACACCTCCCACCT-TA-GCAGCGCAATGGCGACCA
CCACCATGTCCCTCTCCTCGA---CCTTCGCCGGCAAGTCGGTGAAGAACGTGGCTTCATCAGCTCTCTTTGGTGAGGCC
CGTGTCACTATGCGCAAGACCGCTGCAAAGGCCAAGCCGGTTTCATCAGGTAGCCCATGGTACGGTGCCGACCGTGTGCT
CTACCTTGGCCCGCTTTCCGGAGAGCCCCCGAGCTACTTGACCGGCGAGTTCCCCGGCGACTACGGATGGGACACCGCCG
GGCTCTCGGCCGACCCCGAGACCTTTGCCAAGAACCGGGAGCTCGAGGTGATCCACTGCCGGTGGGCCATGCTCGGTGCG
CTTGGATGTGTCTTCCCCGAGCTTCTTGCACGCAACGGCGTCAAGTTCGGCGAGGCGGTATGGTTCAAGGCCGGTTCCCA
GATCTTCAGCGAGGGTGGCCTCGACTACCTGGGCAACCCCAGCCTCGTGCACGCACAAAGCATCCTTGCTATCTGGGCAT
GCCAAGTCGTGCTCATGGGCGCTGTTGAGGGGTACCGCATTGCTGGCGGC------------------------------
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--------------------------------------------CCACTCGGTGAGGTAGTCGACCCACTCTACCCCGGG
GGCAGCTTCGACCCACTGGGCTTGGCTGACGATCCAGAGGCATTCGCGGAGCTCAAGGTGAAGGAAGTCAAGAACGGTCG
CCTCGCCATGTTCTCTATGTTTGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCACTCGAGAACCTCGCTGACC
ACCTCTCCGACCCTGTCAACAACAACGCATGGGCGTTTGCCACAAACTT-------------------------------
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>chr7B_1002
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--------------------------A--TCGGAGAACCTA-AGGGACAACTCCCGTCCTA-GCAACCCAATGGCAGCGG
CCACCATGTCCCTCTCCTCCCCGGCCTTCGCCGGCAAGGCGGTGAAGAATGTGTCGTTGTCGGCCCTCTTCGGTGAGGCA
CGCGTCACCATGCGCAAGACTGCGGCAAAGGCAAAGCAAGTTGCTTCAAGCAGCCCGTGGTACGGTGCCGATCGCGTGCT
CTACCTTGGCCCACTATCAGGTGAGCCGCCGAGCTATTTGACCGGTGAGTTCCCCGGTGACTATGGGTGGGACACTGCTG
GACTCTCAGCTGACCCCGAGACCTTCGCAAAGAACCGTGAGCTGGAGGTGATCCACTGTCGATGGGCCATGCTTGGTGCC
CTCGGTTGTGTCTTCCCTGAGTTGCTTGCCCGCAATGGTGTTAAGTTTGGCGAGGCTGTTTGGTTCAAGGCCGGCTCCCA
AATCTTCAGTGAGGGTGGCCTAGACTATCTCGGTAACCCCAGCCTCGTCCATGCGCAAAGCATCCTGGCCATTTGGGCTT
GCCAAGTTGTGCTCATGGGCGCTGTCGAGGGGTTTCGCATTGCCGGTGGCCCACTCGGCGAGATCGTTGACCCACTTTAC
CCCGGAGGTAGCTTTGACC-------------------------------------------------------------
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-------------CACTCGGGCTAGCCGACGACCCTGAGGCGTTTGCAGAGCTCAAGGTGAAGGAGATCAAGAACGGCCG
TCTTGCCATGTTCTCCATGTTTGGCTTTTTTGTGCAGGCTATCGTCACCGGCAAAGGCCCACTAGAGAACCTCGCTGACC
ATATCACCGACCCCGTCAACAACAATGCGTGGGCATTTGCCACCAACTTCGTGCCCGGCAAGTAAGACA-----------
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>chr1D_1036
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--------------------------------------------------------------GCAGCGCAATGGCGACCA
CCACCATGTCCCTCTCCTCGA---CCTTCGCCGGCAAGTCGGTGAAGAACGTGGCTTCATCAGCTCTCTTTGGTGAGGCC
CGTGTCACTATGCGCAAGACCGCTGCAAAGGCCAAGCAGGTTTCATCAGGCAGCCCATGGTACGGTGCCGACCGTGTGCT
CTACCTCGGCCCGCTTTCCGGCGACCCTCCGAGCTACTTGACCGGCGAGTTCCCCGGCGACTACGGGTGGGACACCGCGG
GGCTCTCGGCCGACCCCGAGACCTTTGCCAAGAACCGGGAGCTCGAGGTGATCCACTGCCGGTGGGCCATGCTCGGTGCG
CTCGGATGCGTCTTCCCCGAGCTTCTTGCACGCAATGGTGTTAAGTTCGGTGAGGCCGTGTGGTTCAAGGCCGGCTCCCA
AATCTTCAGCGAGGGTGGCCTCGACTACCTGGGCAACCCCAGCCTCGTGCATGCACAGAGCATCCTTGCTATTTGGGCAT
GCCAAGTCGTGCTCATGGGTGCCGTTGAGGGGTACCGCGTTGCCGGGGGCCCACTTGGTGAGATAGTCGACCCACTCTAC
CCTGGTGGCAGCTTCGACCCGTTGGGCCTGGCTGATGACCCCGAGGCATTTGCAGAGCTCAAGGTGAAGGAAGTCAAGAA
CGGCCGCCTCGCCATGTTCTCTATGTTTGGCTTCTTCGTGCAGGCCATTGTCACCGGTAAGGGCCCACTCGAGAACCTTG
CTGACCACCTCTCCGACCCCGTCAACAACAACGCATGGGCGTTTGCCACAAACTTTGTTCCCGGCAAGTGAGGCGTTGGC
GCTCGCTAGCTGCGAGTTGTACCCATCAAGGAAACTGCGGTGAACTGCACACATAATATGTGGTTCAAATTGTAACATCA
TGGTGTAAATTACAAGGATCGTTGGGGAAATGGTTTGATCTGCCCGCTTGTTTCATGTCCTGGATGTAGCCTGTGCGTTG
CTCCATGAGAAATGAGAACGATAAAATTTGGGCTATTTGTTTTTCCATGAGAAATTGAGAACGATAAATACTTGGCCGTT
ATTTAATCAGAAGTTGCTCTTGGTGATGGCAACTTATGCTCTCATTTTCTTATGGCCCATCGACCATCATGATCATGCTG
TCTGTTCGGAGAGCCCGTTTGATGCTGCTTCCTGTTTGTGTAGACCCGTGGTGTGTTTTGGCCCCTGTGGAGTGGCCCTA
CTGCAGTATGGGCCCACTGTTGGTTGATTGATTTCGAAACTACTTCACAGACATTTGCTTGCACGATCCTGAGCCGATGT
CAAATCCAACAACTTTCTGTACATTGGCGTCTTGAATGGATGGTGTGAGATGGAGTGTCATGCTGAAATCATCTGTGAAT
GTCGTCTGTATAGCAGTTCTCATTGATTTTGCAGCTGCAATGTGCTTGCTATGGGATCACTGGTCCTTTTGGATTTGTAT
ATGTATGCTTCACATTTGGGGAGATGTTTGCTTATGGATGTTTACTGAACTAACTCTGATGCTCCTTCACATATGTTCTG
AATATTGTTGTTTGTCTGCCAGATTGTGCTTCATTTTTCAGTGGTTGTTCATCTTTCTGTGATGTTCGTGTATTTAGGCC
TCTTTGTTGGGCTATCATGGCTGAAAGACATGGATAACTTAACCAAGAATCAGTCTCCACTCCACGATTGACTGAACGCG
CTTGAGACATCAGCAGAAAAAGAAAGATTTGACGCCTACATATGCGGGCCTTAGCAACTCAACAACTCTACATTGGAGAC
CCGCCTAAAATCTACTACAAATTATGCACCTAACGCCGGGCGCGGCGAAGCGCTGTCCCTCTAGTGTCATCTTTGAAACC
AGGGTTTTTCGGGGATTATTTAAGTTCTACAAAATGTCCGGCTCTCTCTTTTTATTCTTTCTTTTTTACGGAGAAATGCC
CGGCTCTGTGTTTGCCAGCAGGGCTGCGCATTTGGTTAAGTCGATAAATAAGATCTTATTTTTTTTCCAAAAGGCGACGG
TCATGTATTGAAATCAATTGACCCTTACAAAGTCATTCTTGTAGAAATTTAAAATTACACATAGGTTCTTGGGAAAATCC
ACACCACCTTCCTCCTGCACTCGTCAACAACGCGCAGTGAGCGAAACTCAATACCACCTATGGACCACCAAACACCATCG
AGTCAGGAAAACGTTGTTGAGGCGGTAGCCGGAAGTCGTTGATCGGAGCTAGAAGACACTGGCGACGATGATCTGAAACG
CAAATCGCCGTCCCAGAGAAAAGAAGACGGGCACCCAAAATCCAGGGAGACGTAACCTCACAAAGTCACTGACGGCGTCA
AAGCTTGTCGAACATTGTCGGTCGGACGTGCCAGGGACCAAAATACGAAGTTATGACTAAGGTTCGGTCTCGGTAAATAC
CAAACTTCAGTACGGTTTCAATAAATATCTACGAAGTAATCATCGTATGGCCTAAAATTGCCATCACTTTCTTGACCACA
CTTGGGCTACCCACTTCATCAGAGACAAGTTTACTATCTCGTTGCATGCAGACCGTGAGCTGATGATGTGAGAATCAACA
TGTGATCCATCGTCCAATCACACGTCTCCATTCTCCATCAAGATCCTAGGCCTAGCCACAACATATCTCCTTTCTCTGGG
TCTCAAGTTGCCACGTCCTGAGGGATGACGAGATCACTGCTGCACGAATAGCATCGAAGATCAAAGATTTTTTTCCTGTC
TATATCTATCTTGTCGGTACACACAGACCAGAGCTCAATCAGTTCCTTAAATAGCTCCATCCTCCACTCGTCTCAAACCA
TCTCCACACTCACTCTTCAGTTTTCACTGTTTGGAACACACAATACACCTCCCGCCTTAGCAGCGCAATGGCGACTACCA
CCATGTCCCTCTCCTCGGCCTTAGCCGGCGAGTCAGTGAAGAACGTGGCTTCATCAGCTCTCTTTGGTGAGGCCCGTGTC
ACTATGCGCAAGACCGCTGCAAAGGCCAAGCCAGTTTCATCAGGCAGCCCGTGGTACGGTGCTGACCGTGTGCTCTACCT
CGGCCCGCTTTCTGGAGAGCCCCCGAGCTACTTGACTGGCGAGTTCCCCGGCGACTATGGGTGGGACACCGCCGGGCTAT
CGGCCGATCCTGAGACCTTTGCCAAGAACCGGGAGCTCGAGGTGATCCACTGCCGGTGGGCCATGCTTGGTGCGCTCGGA
TGCGTCTTCCCCGAGCTTCTTGCACGCAACGGCGTCAAGTTCGGTGAGGCCGTATGGTTCAAGGCCGGTTCCCAGATCTT
CAGCGAGGGTGGCCTTGACTACCTCGGCAACCCCAGCCTCGTGCATGCACAGAGCATCCTTGCTATCTGGGCATGCCAAG
TCGTGCTCATGGGTGCCGTTGAAGGGTACCGCGTTGCCGGCGGCCCACTTGGTGAGATAGTCGACCCACTCTACCCTGGC
GGCAGCTTTGACCCACTAGGCCTGGCTGACGATCCAGAGGCATTCGCGGAGCTCAAGGTGAAGGAAGTCAAGAACGGACG
CCTTGCCATGTTCTCTATGTTTGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCACTCGAGAACCTCGCCGACC
ACCTCTCTGACCCTGTCAACAACAACGCATGGGCGTTTGCCACAAACTT-------------------------------
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>chr7D_1036
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--------------------------------------------------------------GCAGCCCAATGGCAGCGG
CCACCATGTCCCTCTCCTCCCCGGCCTTCGCCGGCAAGGCGGTGAAGAATGTGTCGTTGTCGGCCCTCTTCGGTGAGGCA
CGCGTCACCATGCGCAAGACTGCGGCAAAGGCAAAGCAAGTTGCTTCGAGCAGCCCGTGGTATGGTGCCGAACGCGTGCT
CTACCTTGGCCCACTATCAGGTGAGCCGCCGAGCTATTTGACCGGTGAGTTCCCCGGTGACTACGGGTGGGACACCGCTG
GACTATCGGCTGACCCCGAGACCTTCGCAAAGAACCGTGAGCTGGAGGTGATCCATTGCCGATGGGCCATGCTTGGTGCC
CTTGGCTGTGTCTTCCCTGAGTTGCTCGCCCGCAATGGTGTTAAGTTTGGCGAGGCTGTTTGGTTCAAGGCTGGCTCCCA
AATCTTCAGCGAGGGTGGCCTCGACTATCTCGGCAACCCCAGCCTCGTCCACGCGCAAAGCATCCTGGCCATTTGGGCTT
GCCAAGTTGTGCTCATGGGTGCCGTCGAGGGGTTTCGCATTGCCGGTGGCCCACTTGGCGAGATCGTTGACCCACTTTAC
CCTGGAGGCAGCTTTGACC-------------------------------------------------------------
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-------------CGCTCGGCCTAGCCGACGACCCTGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAACGGCCG
CCTTGCCATGTTCTCCATGTTTGGCTTCTTTGTGCAGGCCATCGTCACCGGCAAAGGCCCACTAGAGAACCTTGCTGACC
ATATCACTGATCCCGTCAACAACAATGCATGGGCATTTGCCACCAACTTCGTGCCCGGCAAGTAAGACA-----------
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>chr7B_1036
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--------------------------------------------------------------GCAGAGCAATGGCGGCCA
CCACCATGTCCCTTTCCTCCTCAGCATTTGCTGGCAAGGCAGTGAAGATTGTGTCATTGTCGACTCTCTTCGGTGAGGAA
CGTGTCACCATGCGCAAGACTGCGGCAAAGGCAAAGCAAGTTGCCTCTAGCAGCCCGTGGTACGGGGCTGACCGCGTGCT
CTACCTCGGCCCGCTATCAGGTGAGCCACCGAGCTATTTGACCGGTGAGTTCCCTGGTGACTATGGGTGGGATACCGCCG
GGCTCTCAGCTGACCCCGAGACCTTCGCCAAGAACCGTGAGCTGGAGGTGATCCACTGCCGATGGGCTATGCTTGGCGCG
CTCGGTTGTGTCTTCCCTGAGTTGCTCGCCCGCAATGGTGTCAAGTTTGGCGAGGCTGTTTGGTTCAAGGCTGGCTCCCA
AATCTTCAGCGAGGGCGGCCTCGACTATCTCGGCAACCCCAGCCTCGTCCACGCGCAAAGCATCCTGGCCATTTGGGCTT
GCCAAGTTGTGCTCATGGGCGCTGTCGAGGGGTTCCGCATTGCCGGTGGCCCACTCGGCGAGATTGTTGACCCGCTTTAC
CCTGGAGGCAGCTTTGACC-------------------------------------------------------------
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-------------CGCTCGGCCTAGCCGATGACCCTGAGGCGTTCGCGGAGCTCAAGGTGAAAGAGATCAAGAACGGCCG
CCTTGCCATGTTCTCCATGTTTGGCTTCTTTGTGCAGGCCATTGTCACAAGCAAAGGACCGCTAGAGAACCTCGCTGACC
ATATCACCGATCCCGTCAACAACAATGCATGGGCATTTGCCACCAACTTCGTGCCCGGCAAGTAAGACA-----------
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>SNPs
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---------------------------------------------------------------------S----------
----------------------------------------------------------S-----------S------S--
------------S----------------S--------------------------------------S-------S---
----S-S---S--------S-S--------------------------S---S-----S----S----------S-----
--S---S-----S---S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
------------------------------------S----------------------S--------------------
------S--------------S-------S---------------------------------S------S--S------
---------------S--S-------------------------------------------------------------
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----S---------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---------------------S-------------------------------------------S--------------
-----------------------------S--------------------S-----------------------------
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-S------------------------------------------------------------------------------
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---------------------------------------------------S---S-------------S---------S
--S--S------------------------------------------S-------------------------------
-----------------------------------------------------------------------S--------
-----------------S----------------------------------S---------------------------
----------------------------S------------------S-------------------S------------
-------------------S-----------------------------------S------------------------
-----S--S------------S-S--------------------------S-----------------------------
---S----S-S--------S-------------S--------------------------------S----------S--
SSSSSSSSSSSSS-------------S-SSS-----S-----S-------------------------------------
-----------------S--S---------------SS------------------------------------------
-------------S-----S--------S-------------------S-----------------------S-------
------S-S-----------------------------------------------------------------------
----SS----------------------------------S---------------------------------------
-------------------------------------------------------------------------------S
----S--S-S----------------------------------------S--S----------S---------------
---------------------S---------------S-----S-------------------------SSSSSSSS
>forward_541
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-----------------------------------------AGCATGGCCCAATTTACCCA-------------------
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>reverse_5372
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-----------GGTGGATGGTCTCGGTTGAG-------------------------------------------------
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