>input_sequence_63392
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---------------ATGGGAGGAGTTCTCATGCAGCATCACCAAATCTCTCGCACTCCTCTGCGAAAAGCGGCCTTCGC
CGGATCATTTGCTCTCCAAAGAGGTGATTATGAAACATTGTAGTTATCTCCTTTTCGATACAAAACATTTTCATCAAGGT
CAGTGTGTTTAAGCTCCT-------------------------------------TGTGCTCACTGCCTCGCTGGTT-AT
ACTTTTTGTACG-----ATTTTATATGATACATACTATACTACTCCCTCCGTGCCGAATTACTTGTCGCATAAATGGATA
GGAGTACAAAACAGGCACCATTGTAGTCTCTGCTGTTACAGCTTCCTCTCTTGGTTTCAGTATCGCTTTCAATCTGACCG
AGTGGCAGTTCACTGGAAATCACTTCTTCTGCTCTTTGCCAGATTAATTTTTCGAAAATAAAAACAGTAACCACTGATGA
GAAAACCTCAGTTAAC---TAGTAACTACGCGGTCTTTTGGTGAAGTCTGTAGCGCTGAATTTGGTAGCACCTG------
-CAGATGTTGCTCTCCATCGCGCTCCACGGCGGGGTTCTCTGCCGTGCTCATCTTCCCTGACGGTCAGAGCAGAAGCCAA
CGGGTCCTCCACTTCAAGAATGGCGGTCAAGAAGCACAGCAAAGAAGAGCTCATGGAGTTCTTCGGGGCCATCCAGGCCG
CCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAAGCCGTCGTCGCCGGCTGACACGCTCGAAGATGCCGGC
ACGAAGATGAAACCACACGGTAACTGAAAAACATCACAGAT----GTAGTTTGTTTCCTTTGCTCTGGA-------TCAT
CATC----CGCTTGTCGTTGTGACAAGGCGTGTGTGGCTTGTGCTTTCAGAGGGACTGCAGCAAGACGGGCAGCCAAATT
TTGAGGGCATGACGGTGCCCGAGCTGAGGGACTTGGCGAGGGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGG
GAGCTGATTGATCGTCTGAGAGGTGCTTGGTCGTCTGATAATTAA-----------------------------------
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>chr3D_1_TraesCS3D01G137700
GAGCCAAAACCCAACTTCTCAAGGTACCCATGAACTACCTCACCATCCGCGATACTGCCTAAACCAGCAATGCACTTCAA
GACGCAGGAAATGGTGTATGCGTCCGGCCGAACCCCACAGCAGTGCATCTTCCTAAACAGCAACACACCTTCTCGTAAAT
CACCAGCCTTGGCATAACCGCTCATCAGAGCAGTCCAAACACGCACATCACTTACTTGAGGCATTTCATCAAACACCCTT
CTTGCACTCCCCAAGTCCCCACACTTCAAATACATCAGCACCAATTTCTGCCCAAGAACACTGTCCATTCCATCTACTCC
AAGGCCAGATGCCCGAACCAGGAAATGGGCTCTCTTCCCACCCTCCAACGACCTCATCTCCGAGCAGAGCTGGAGCACGG
CGCCGTAGCTCCGGTCATCGACCCCATCCGAGCCGAGCAACCTCAAAGCCTCCGCCAAGTCGCCCGACCGACACAGCCGC
TGAATCTGCAGGTTCACGTCGGAGCTCGGGGGCCAGTTTGGCGATTTCTCGGCGTCCCTCGGAGGAGCGGCTGCCTCCAA
GGCTTGGCCGGACGGCGCGAGGACGCCACACCGAACCCTCGCTCTCTGGCTGGTGCTCTTGGGAGGCGGCCATGGCGGCG
GAGCTCGGAGGTGGCTGGAAATGGAGGCTGCCGGAGGCGTCGCCATGGG------------AGGAGTTCAAATTTTGCCG
CGAAATTCGCGCTGTCGGCGTGGTTTGGTCTTGCAGTGGATAGCTTTCTGGATTAGGCTGCTTCTTTGGCCATTTGCCCC
CTCACATTCCGTAAAACTGACAAAATGACACATGTTAGCTACAGTCCTTTCTGCTCCATCGATGCTAAAAAAAAGACCAT
TT-TCTAACGAGGGTGTTTACGTAAAATTTCATGGACTGTCGGTATCATTTACCATCTCCGTGTGGCTGAGAAAGAGGAT
AGAGCACTCACAGAGTAAGAGCACAACTGTCA------------------------------------------CAGAGG
AAGAAGAGAGGAGAAATGGGAGGAGTTCTCATGCAGCATCACCAAATCTCTCGCACTCCTCTGCGAAAAGCGGCCTTCGC
CGGATCATTTGCTCTCCAAAGAGGTGATTATGAAACATTGTAGTTATCTCCTTTTCGATACAAAACATTTTCATCAAGGT
CAGTGTGTTTAAGCTCCT-------------------------------------TGTGCTCACTGCCTCGCTGGTT-AT
ACTTTTTGTACG-----ATTTTATATGATACATACTATACTACTCCCTCCGTGCCGAATTACTTGTCGCATAAATGGATA
GGAGTACAAAACAGGCACCATTGTAGTCTCTGCTGTTACAGCTTCCTCTCTTGGTTTCAGTATCGCTTTCAATCTGACCG
AGTGGCAGTTCACTGGAAATCACTTCTTCTGCTCTTTGCCAGATTAATTTTTCGAAAATAAAAACAGTAACCACTGATGA
GAAAACCTCAGTTAAC---TAGTAACTACGCGGTCTTTTGGTGAAGTCTGTAGCGCTGAATTTGGTAGCACCTG------
-CAGATGTTGCTCTCCATCGCGCTCCACGGCGGGGTTCTCTGCCGTGCTCATCTTCCCTGACGGTCAGAGCAGAAGCCAA
CGGGTCCTCCACTTCAAGAATGGCGGTCAAGAAGCACAGCAAAGAAGAGCTCATGGAGTTCTTCGGGGCCATCCAGGCCG
CCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAAGCCGTCGTCGCCGGCTGACACGCTCGAAGATGCCGGC
ACGAAGATGAAACCACACGGTAACTGAAAAACATCACAGAT----GTAGTTTGTTTCCTTTGCTCTGGA-------TCAT
CATC----CGCTTGTCGTTGTGACAAGGCGTGTGTGGCTTGTGCTTTCAGAGGGACTGCAGCAAGACGGGCAGCCAAATT
TTGAGGGCATGACGGTGCCCGAGCTGAGGGACTTGGCGAGGGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGG
GAGCTGATTGATCGTCTGAGAGGTGCTTGGTCGTCTGATAATTAACAAGTCTTCCTCTCCGAGACAGAAACAGACCGAAC
TGA---------TTCGGCTTACAATCGACTTTTCTTGCGTCTGTTGTTTTCACTGAGGATTATAAAATGGGTCCGTCTAT
ATTACATCTAGATGTGAGATAATATCTCACATCTAAGTAT--GATGTCATCGTCATCTTTTTATTGTTTAGCTTATTTGT
TCGATTTTGATTTGTCATAAAGCCTGAAACAAACGAACCAGTTTCGCGTTCACGTCCGCCTCGATGGGCCGGCC--TATA
CGTCCG-------ACAGCTCGTAGT------------GAGGCTAGCTTTTTACGTTGTGCATCAGCCAGCCGAAGATTCC
TTCTTGCTACATGTGTCTCTCCCTGTGCGTGC----ATGGTAGATCAATAGATCATATTAGATCGGATGGCGACGTAGGG
AGAAGCAGCAAGCACCTTGATAAGTTGTGTTGTGTCACTACTCGAAGCTAAGGCTCAGA-TTTTTTTTTCCAGGAAAAGC
TAGTGATCAGATGTATATCAGTGAAAGTAAAGTAGCTCTACCATCGAT-TT-GTTAGTTTTTGCGTTTTATTGCCCACTT
TTTAGCGGCCTGTCTCTGATCGCTAGCTTCTAATAGGCTATAAATGATT---TTTTTT--GCCCTTTGGTTCTTGCTTTC
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAGTAAAAGACAAAGTTTGAT--TAA-AAAAA-TCAGAAATATGTT
CACGAATTTGTGGTAATATAC------ATTTTT-------T--AATATACGGTGAACTTTTTTATATACAATGAACTTTT
TAAATTATATTCACTAAACTTTTTTAATA--CACACTAAATATTTTTTAAATACAAACTTAACCTTTT-TTAATATACGT
AGAACCCTTTTAAATA-TACGATAAAACATTTTTATAATATACACTAAATAA-TTTTTTAAACACATACAGAACAATTGA
TCGTGCATCCAAAAGTGTTAA-AATTGTTCGTGG-ATTCAGAAAATGTTCGCCGATTCAAAATAAATAAACCACA
>chr3B_1
GAGCCAAAACCCAACTTCTCAAGGTACCCATGAACTACCTCGCCATCCGCGATACTGCCCAAACCAGCAATGCACTTCAA
GACGCAGGAAATGGTGTACGCGTCCGGTCGAACCCCACAGCAGTGCATCTTCCTAAACAGCAACACACCTTCTCGTAAAT
CGCCGGCCTTGGCATAACCGCTCATCAGAGCAGTCCAAACACGCACATCGCCTACCTGAGGCATTTCGTCAAACACCCTT
CTTGCACTCCCCAAGTCCCCACACTTCAAGTACATCAGCACCAATTTCTGCCCGAGAACACTGTCCATTCCATCTATTCC
AAGGCCGGATGCCCGAACCAGGAAATGGGCTCTCTTCCCACCCTCCAACGACCTCATCTCCGAGCAGAGCTGGAGGACGG
CGCCGTAGCTGCGGTCATCGACCCCATCCGAGCCGAGCAACCGCAAAGCCTCCGCCAAGTCACCCGACCGACACAGCCTC
TGAATCCGCAGGTTCACGTCGGAACTCGGGGGCCAGTTTGGCGATTTCTCGGCGTCCCTCGGAGGAGCGGCAGCCTCCGA
GGCTTGGCCGGACGGTGCGAGGACGCCACACCGAACCCTCGCTCTCTGGCTGGTGCTCTTGGGAGGCGGCCATGGCGGCG
GAGCTCGGAGGTGGCTGGAAATGGAGGCGGCTAGGGGCGTCGCCATGGG------------AGGAGTTCAAATTTTGCCG
CGAAATTCGCGCTGTCGGCGTGGTTTGGTCTTGCAATGGATAGCTTTCTGGATTAGGCTGCCTCTTTGGCCATCTGCCCC
CTCGCATCCCTTAAAACTAACAAAATGACACATGTTAGCTACGGTCCTTTCTGCTCCATCGACGCTAAAAGAGGT-CCAT
TT-TCTAACGAGGGTGTTTATGTAAAACTTCACGGACTGC----ATCATTTACCATCTCCGTGTGGCTGAGAAAGAGGAT
AGAGCACTCAGAGAGTAAGAGCAT-ACTGTCACTCCATTAGAGGGCAGCAAGGAGGTCAGCTTCGGTTCTTTGGCAGAGG
AAGAAGAGAGGAGAAATGGGAGGAATTCTCATGCAGCATCACCAAATCTCTCTCAGTCCTCTGCGAAAAACGGCCTTCCC
CGGATCATTTGCTCTCCAAAGAGGTGATTATCAAACATTGTAGTCATCTCCTTTTCGACAGAAAACATTTTCATCAAGGT
CAGTGTGTTTAAGCTCCT-------------------------------------TGTGTTCATTGCCTCGCTGGTT-AT
ACTTTTTGTATG-----ATTTTATATGATAC-----ATACTATTCCCTCCGTCCCAAATTACTTGTCGTAGAAATGGATA
GGAGTACAAAACAGGCACCATTGTAGTCTCTGCTGTT-------------------------------------------
----------CACTAGAAATCACCTTTTCTGCTCTTTGCCAGATTAAATTTTCGAAAATATAAATAGTAACCGCTGATGA
GAAAACCTCAGTTAACTAGTAGTAACTGCGCGGCCTTTTGGTGAAGTCTGTCGCGCTGAATTTGGTAGCACCTG------
-CAGATATTGCTCTCCATCGCGTTCCACGGCGGGGTTCTCTGCCGTGCTCATCTTCCCTGACGGTCAGAGCAGAAGCCAA
CGGGTCCTCCACTTCAAGAATTGCGGTCAAGAAGCACAGCAAAGAAGAGCTCATAGAGTTCTTCGGGGCCATCCAGGCCG
CCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAAGCCGTCGTCGCCGGCTGGCACGTTCGAAGAAGCCGGC
ACGAAGATGAAACCACACGGTAACTGAAAAACATCACAGATATAAGTAGTTTGTTTCCTTCGTTCTGGA-------TCAT
CATCGATCCGCTTGTCGTTGTGACAAGGCGTGCGTGGCTTGTGCTTTCAGAGGGACTGGGGCAAGATGGGCAGCCAAATT
TCGAGGGCATGACGGTGCCCGAGCTGAGGGACTTGGCGAGGGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGG
GAGCTGATTGATCGTCTGAGGGGTGCTTGATCGTCTGATAATTAACAAGGCTTCCTCTCCGAAACAGGAACAG-------
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>chr3A_1
GAGCCAAGACCCAACTTCTCAAGGTACCCATGAACCACCTCACCATCCGCGATACTGCCCAAACCAGCAATGCACTTCAA
GACGCAGGAAATGGCGTATGCGTCTGGTCGAATCCCACAGCAGTGCATCCTACTAAACAGAGACACACCTTCTCGTAAAT
CACCAGCCTTGGCATAACCGCTCATCAGAGCAGTCCAAACGCGCACATCGCTCACTTGAGGCATTTCGTCAAACACCCTT
CGTGCACTCCCCAAGTCCCCACACTTCAAGTACATCAGCACCAATTTCTGCCCGAGAACACTGTCCATTGCATTTGTTCC
AAGGCCAGATGCACGAACCAGGAAATGAACTCTCTTCCCACCTTCCAACGACCTCATCTGCGAGCAGAGCTGGAGGACGG
CGCCGTAGCTCCGGTCGTCGACCCCAGCCGAGCCGAGCAACCTCAAAGCCTCCGCCAACTCACCCGACCGACACAGCCTC
TGAATCTGCAGGTTCACGTCGGAACTCGGGAGCCAGTTTGGCGATTTCTCGGCGTCCCTCGGAGAAGCGGCTGCCTCCAA
GACTTGGCCGGACGGTGCGAGGACGCTACACCGGACCCTCGCTCTCTGGCTGGTGCTCTTGGGAGGCGGCCATGGCTGCG
GAGCTCGGGGGTGGCTGGAAATGGAGGCGGCTGGAGGCGTCGCCATGGGAGCTGGAGGCAGAGGAGTTCAAATTTTGCCG
CGAAATTGGCGCTGTCGGCGTGGTTTGGTCTCGCAATGGATAGCTTTCTGGATTAGGTTGATTCTTTGGCCATTTGCTCC
CTCGCATTCCGGAAAATTCATAAAATGACACAAGTTAGTTACGGTCCTTTCTACTCCATCGATGCTAAAAAAAGA-CCAT
TTCTCTAACGAGGGTGTTTATGTAAAACTTCATGGACTGC----ATCATTTACCACCTCCGTGTGGCTGAGGAAGAGGAT
AGAGCGCAAACAGAACAAGAGCGCAACTGTCACTCCATTGGAGAACAGCAAGGAGGCCAGCTTCGGTTCATTGGTAGAGG
AAGGAGAGAGAAGAAATGGGAGGAATCCTCATGCAGCATCACCAAATCTCTCCCAGTCCTCTGCGAAAAGCCGCCTTCCC
CGGATCATTTGCTCTCCCAAGAGGTGATTGTGAAACATTGTAGTTATCTCCTTTTCGATAGAGAACATCTTCATCAAGGT
TAGTTAGTTAGTGCGTTTAATGATATATAGGAAACAGGCACCATTGCAGTCATTGTGCCTGCATTGCCACATTGGTGAAT
ACATTTTGTACTAGTACAATTTTAATGATATATAGG--------------------------------------------
--------AAACAGGCACCATTGCAGTCTCTGCCATG---GCTCCCTCTCTTAGTTTCAGTCTCCCTTCCAACCTGACCG
AAAAAAA-------------------------------------------------------------------------
---------------------------------TCTTATGGCGAAGTCTGAAGCCCTGAATTCGG-------TGGCATCT
GCAGATTTTGCTCTCCATCGCGCTCCACTGCGGGGTTCTCTGCCCTGCTCATCTTCCCTGACGGTCAGATCCGAAGCCAA
CGGGTATCCGCCTTCAAGAATGGCGGTCAAGAAGCACAGCAAAGAAGAGCTCATAGAGTTCTTCAGCGGCATCCAGGCCG
CCATTACCAGGGACTCGCCCAAGGCGCCCGGGAGGACGAGGAAGCCGTCGTCGCCGGCTGGCACGCTCCAAGAGGCCGGC
ATGAAGCTGCAACCACACGGTAACTTGACAGCATCAGGATGAAAATAATTATGTTTCCTTTGTTCTGAA-------CCAT
CATC---------------------------GCGTTGCTTGTGCTTCCAGAGGGACTGCACCAAGACGGGCAGCCAAATT
TGGAGGACATGAAGGTGCCCGAGCTGAGGGACATGGCGAGGGTGAGGGGGATGAGAGGCTACTCCAAGCTGAAGAAAGGG
GAGCTCATTGATCGTCTGAGGGGGTTGGC-----CTGATAGTTAACAAGCCTTCCTCTCCGAGACACGAACAGGCAGAGT
TGATCGAACCGGTTCAGCTTACAATCGACTTTTCTTGCGCCTGTTGTTTTC-----------------------------
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>chr3D_1115
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-------------------------------------------------CCTTTTCGACAGAAAACATTTTCATCAAGGT
CAGTGTGTTTAAACTTCT-------------------------------------TGTGTTCATTGCCTCGCTGGTT-AT
ACTTTTTGTACG-----ATTTTATATGATACATACTACTC--------------------ACTTGTCGCCGAAATGGATA
GGAGTACAAAAC-----CCATTGTAGTCTCTGCTGTTACAGCTTCCTCTCTTGGTTTCAGTATCTCTTTCAATCTGACCG
AGTGGCAGTTCACTGGAAATCACTTTTTCTGCTCTTTGCCAGATTAATTTTCTAAAAATAAATATAGTAACCACTGATGA
AAAAAGCTCAGTTAACTAGTAGTAACTGCGCGGCCTTTTGGTGAAGTCTGTAGCGCTGAATTTGG-------TG------
-CAGATATTGCTCTCCATCGCGCTCCACGGCGGGATTCTCTGCCGTGCTCATCTTCCCTGGCGGTCAGAGCAGAAGCCAA
CGGGTCCTCCACTTCAAGAATGGCGGTCAAGAAGCACAGCAAAGAAGAGCTCATGTAGTTCTTCGGGGCCATCCAGGCCG
CCATTGCCAGGGACTCTCCCAAGCCGCCCGGGAGGACGAGGAAGCCGTCGTCGCCGGCTGACACGCTCGAAGATGCCGGC
ACGAAGATGAAGCCACACGGTAACTGAAAAGCATCACCGATA----TAGTTTGTTTCCTTTGTTCTGGAATCTGGATCAT
CATC-ATCCGCTTGTCGTTGTGACAAGGCGTGCGTGGCTTGTGCTTTCAGAGGAACTGGGGCAAGATGGGCAGCCAAATT
TCGAGGGCATGACGGTGCCCGAGCTGAGGGACATGGCGAGGGTGAGGGGGATGAGAGGTTACTCCAAGCTGAAGAAAGGG
GAGCTGATTGATCGTCTGAGGGGTGCATGGTCGTCTGATAATTAACAAGTCTTCCTCTCCGAGACAGAAACAGACCGAAC
TGA---------TGCAGCTTACAATCGACTTTTCTTGCGTCTGTTGTTTTCACTGAGGATTATAAAAT------------
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>chr6B_2088
TTAA----------------------------------------------------------------------------
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---------------------------------------------------------------AAAATGGGTCCGTCTAT
ATTACATCTAGATGTGAGATAATATCT-------AAGTAT--GATGTCATCGCCACCTTTTTATTGTTTATCTTATTTAT
TCGATTTTGATTTGTCATAAAGCCTGAAACAAACGAACCATTTTCGCGCTCACGTCCACCTCGATGGGCCGGCC--TATA
CGTCCG-------ACAGCTCGTAGT------------GAGGCTAGCTTTTTACGTTGTGCATCAGCCAGCCGAAGATTCC
TTCTTGCTACATGCATCTCTCCCTGTGCGTGCATATATGGTATATCAATAGATCATATTAGATCGGATGGCGACGTAGCG
AGAATCAGCAAGCACCTTGGTAAGTTGTGTTGTGTCACTACTCGAAGCAAAGGATCAGA-TTCCTTTTTCCAGGAAAAGC
TAGTGATCAGATGTATATCAGTGAAAATAAAGTAGTTCTACCATCGAT-TT-GTTAGTTTTTGCGTTTTATTGCGCACTT
TTTAGCGGCGTGTCTCAGATCGCTAGCTTCTAATAGGCTATAAATGATT---TTTTTTT-GCCCTTTTGTTTTTGCTTTC
CTGTTCCACTCTTTATATTTTATGCATTAATTTTTAGTAAAAAACAAAGTTTGAT--TAAAAAAAA-TCAAAAATATGTT
CACAAATTTGTGGTAATATAC------ACTTTT-------T--AATATACAGTGAACTTTTTTATATACAATGAGCTTTT
TAAATTATATTCACTAAACTTTTTTTATA--CACACTAAATATTTTTTAAATACAAACTTAACCTTTTTTTAATATACGT
AGAACCCTTTTAAATA-TACAGTAAAACATTTTTATTGTATAAACTAAATAA-TTTTTTAAACACATACTGAACAATTGA
TCATGCATCCAAAAGTGTTAACAATTGTTCGTGG-ATTAAGAAAATGTTCGCCGATTCAATATAAATAAATCACA
>chr5B_2094
AAC-----------------------------------------------------------------------------
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--------------------------------------------------------------------GGATCCGTCTAT
ATTACATCTAGATGTGAGATAATATCTCACATCTAAGTGT--GATGTCATCGCCACCTTTTTATTGTTTATCTTATTTGT
TCGATTTTGATTTGTCATAAAGCCTGAAACAAACGAACCAGTTTCGCGCTCACGTCCGCCTCGGTGGGCCGGCC--TATA
CGTCCG-------ACAGCTCGTAGT------------GAGGCTAGCTTTTTACGTTGTGCATCAGCCAGCCGAAGATTCC
TTCTTGCTACATGTGTCTCTCCCTGTGCGTGC----ATGGTAGATCAATAGATCATATTATATCGGATGGCGACGTAGGG
AGAAGCAGCAAGCACCTTGATAAGTTGTGTTGTATCGCTACTCGAAGCTAAGGATCAGA-TTTTTTTTTCCAGGAAAAGC
TAGTGATCAGATGTAAATCAGTGAAAATAAAGTAGTTCTACCATCGAT-TT-GTTAGTTTTTGCGTTTTATTGCCCACTT
TTTAGCGGCGTGTCTCTGATCGCTAGCTTCTAATAGGCTATAAATGATT---CTTTTTTTGCCCTTTGGTTTTTGCTTCC
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAGTAAAAGACAAAGTTTGAT--T-A-AAAAA-TCAGAATTATGTT
CACGAATTTGTGGTAATATAC------ATTTTG-------T--AATATACAGTGAACTTTTTTATATACAATGAGC-TTT
TAAATTATATTCACTAAACTTTTTTAGTA--GACACTAAATATTTTTTAAATACAAACTTAACCTTCTTT-AATATACAT
AGAACCCTTTTAAATA-TACGGTAAAACATTTTTATAATATACACTAAATAA-TTTTTTAAACACATACTGAACAATTGA
TCGTGCATCCAAAAGTGTTAACAATTGTTCATGG-ATTCAGAAAATGTTCACCGATTCAAAATAAATAAATCACA
>chr1A_2095
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------------------------------------------------------------------ATGGGTCCGTCTAC
ATTACATCTAGATGTGAG----------ACATCTAAGTAT--GATGTCATCGCCGCCTTTTTATTGTTTAC-----TTGT
TCGATTTTGATTTGTCTACGATTTTGATTT----------GTTTCGCGCTCACGTCCGCCTCGATGGGCCGGCC--TATA
CGTCCG-------ACAGCTCGTAGT------------GAGGCTAGCTTTTTACGTTGTGCATCAGCCAGCCGAAGATTCC
TTCTTGTTACATGTGTTTCTCCCTGTGCGTGC----ATGGTACATCAATAGATCATATTAGATCGGATGGCGGCGTAGGG
AGAAGCAGCAAGCACCTTGATAAGTTGTGTTGTGTCACTACTCGAAGCTAAGGATCAGA-TTTTTTTTTCCAGGAAAAGC
AAGTGATCAGATGTATATCAGTGAAAACAAATTAGCTCTACCATCGAT-TA-GTTAGTTTTTGCGTTTTATTGCCCACTT
TTTAGCCGCGTGTCTCTGATCGCTAGCTTCTAATAGGCTATAAATGAATTTTTTTTTT--GCCCTTTGGTTTTTGCTTTC
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAGTAAAAGACAAAGTTTGAT--T-A-AAAAAATCAGAAATATGTT
CACGAATTTGTGGTAATATAC------A-TTTT-------T--AATATACAGTGAACTTTTTTATATACAATGAGCCTTT
TAAATTATATTCACTAAGCTTTTTTAATA--CACACTAAATATTTTTTAAATACAAACTTAACCTTTTTT-AATATACGT
AGAACCCTTTTAAATA-TACGGTTAAACATTTTTATAATATACACTAAATAA-TTTTTTAAACACATA--GAACAATTGA
TCGTGCATCCAAAAGTGTTAAAAATTGTTCGTGG-ATTCAAAAAATGTTCGCCAATTCAAAATAAATAAATCACA
>chr3A_2096
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-------------------------------------------------------------------TGGGTCCGTCTAT
ATTACATCTAGATGTGAGATAATATCTCACATCTAAGTAT--GATGTCATCGCCGCCTTTTTATTGTTTAT-----TTGT
TCGATTTTGATTTGTCTACGATTTTGATTT----------GTTTCGCGCTCACGTCCGCCTCGATGGGCCGGCC--TATA
CGTCCG-------ACACCTCGTAGT------------GAGGCTAGCTTTTTATGTTGTGCATCAGCCAGCCGAAGATTCC
TTCTTGCTACATGTGTCTCTCCCTGTGCGTGC----ATGGTAGATCAATAGATCATATTAGATCGGATGGCGACGTAGGG
AGAAGCAGCAAGCACCTTGATAAGTTGTGTTGTGTCACTACTCGAAGCTAAGGATCAGA-TT-TTTTTTCCAGGAAAAGC
AAGTGATCAGATGTATATCAGTGAAA-TAAATTAGCTCTACCATCGAT-TA-GTTAGTTTTTGCGTTTTATTGCCCACTT
TTTAGCGGCGTGTCTCTGATCGCTAGCTTCTAATAGGCTATAAATGATT---TTTTTT--GCCCTTTGATTTTTGCTTTC
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAGTAAAAGACAAAGTTTGAT--T-A-AAAAAATCAGAAATATGTT
CACGAATTTGTGGTAATATAC------A-TTTT-------T--AATATACAGTGAACTTTTTTATATACAATGAGCCTTT
TAAATTATATTCACTAAGCTTTTTTAATA--CACACTAAATATTTTTTAAATACAAACTTAACCTTTTTC-AATATACGT
AG-ACCCTTTTTAATA-TACGGTTAAACATTTTTATAATATAAACTAAATAA-TTTTTTAAACACATA--GAACAATTGA
TCGTGCATCCAAAAGTGTTAAAAATTGTTCGTGG-ATTCAGAAAATGTTCGCCAATTCAAAATAAATAAATCACA
>chr5A_2097
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--------------------------------------------------------------------GGGTCTGTCTAT
GTTACATCTAGATGTGAGATAATATCTCACATCTAAGTATATGATGTCAACGCCATCTTCTTATTGTTTATCTTGTTTGT
CTGATTTTGATTTGTCATAAAGCCTGAAACAAACGAAACAGTATTGCGCTCACGTCCGCCTCGGTGGGCCGGCCCCTATA
CGTCCGACAGCTCACAGCTCTTAGTGTGTACTAGCAGGAGGCTAGCTTTTTACGGTGTGCAACAGCCAGCCGAAGATTCC
TTCTTGCTACATGTGTCTCTTCCTGTGCGTGC----ATGGTAGATCGATAGATCATATTAGATTGGATGGCGACGCAAGG
AGAAGCAGCAAGCACCTTGGTAAGTTGTGTTGCGTCACAACTCGAAGCTAGCGATCAA-----TTTTTTCCAGGAAGATC
TAGTGATCAGATGTATGTCAGTGAAAATAAAGTAGCTCTACCATCAAT-TT-GTTGGATTTTGCATTTTATTGCCATCTA
TTTAGCGGTGTGTCTTTGATCCCTAGCTTCTAGTAGGCTATAAATGATTTGTTTTTTT--GCCCTTCTGTTTTTGCTTTT
CCGTTCCACTCT--ATATTTTATGCATTAATTTTCAATAAAAGACAAAGTTTGAT--A-A-AAAATTTCAGAAACATGTT
CACCAATTTGCGGTTATATAC------A-TTTAATTTCTAA--AATATACAGTGAACTTTTTTAGATACAATGAACATTC
TAAA----------------------------------------------------------------------------
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>chr4A_2098
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---------------------------------------------------------------------GGTCCGTCTAT
ATTACATCTAGATGTGAGATAATATCTCACATCTAAGTAT--GATGTCATCGCCGC-TTTTTATTGTTTAT-----TTGT
TTGATTTTGATTTGTCTACAATTTTGATTT----------GTTTCACGCTCACGTCCGCCTCGATGGGCCGGCC--TATA
CGTCCG-------ACAACTCGTAGT------------GAGGCTAGCTTTTTACGTTGTGCATCAGCCAGCCGAAGATTCC
TTCTTGCTACATGTGTCTCTCCCTGTGCGTGC----ATGGTAGATCAATAGATCATATTAGATCGGATGGCGACGTAGGA
AGAAGCAGCAAGCACCTTGATAAGTTGTGTTGTGTCACTACTTGAAGCTAAGGATCAGA-TT-TTTTTTCCAGGAAAAGC
AAGTGATCAGATGTATATTAGTGAAAATAAATTAGCTCTACCATCGAT-TA-GTTAGTTTTTACGTTTTATTGCCCACTT
TTTAGCGGCGTGTCTCTAATCGCTAGCTTCTAATAGGCTATAAATGACTT-TTTTTTT--GCCCTTTGGTTTTTGCTTTC
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAGTAAAAGACAAAGTTTGAT--T-A-AAAAAA-CAGAAATATGTT
CACGAATTTGTGGTAATATAC------A-TTTT-------T--AATATACAGTGAACTTTTTTATATACAATGAGCCTTT
TAAATTATATTCACTAAGCTTTTTTA--ATACACACTAAATATTTTTTAAATACAAACTTAATCTTTTTT-AATATACGT
AGAACCCTTTTAAATA-TACGGTTAAACATTTTTATAATATACACTAAATAA-TTTTTTAAACACATA--GAACAATTGA
TCGTGCATCCAAAAGTGTTAAAAAAATTTCGTGG-ATTCAGAAAATGTTCGCCAATTCAAAATAAATAAATCACA
>chr2B_2100
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-----------------------------------------------------------------------TCCGTCTAT
ATTACATCTAGATGTGAGATAATATCTCACATCTA-GTAT--GATGTCATCGGCACCTTTTTATTATTTATCTTATTTGT
TCAATTTTGATTTGTCATAAAGCCTGAAACAAATGAACCAGTTTCGCGCTCACGTCCGCCTCGATGGGCCGGCC--TATA
CGTCCG-------ACAACTCGTAGT------------GAGGCTAGCTTTTTACGTTGTGCATCAGCCAGCCAAAGATTCC
TTCTTGCTACATGTGTCTCTCCCTGTGCGTGC----ATGGTAGATCAATAGATCATATTAGATCGGACGGTGACGTAGCG
AGAAGCAGCAAGCACCTTGGTAAGTTGTGTTGTGTCACTACTCGAAGCAAAGGATCAGA-TTCCTTTTTCCAGGAAAAGC
TAGTGATCAGATGTATATCAGTGAAAATAAAGTAGTTCTACCATCGAT-TT-GTTAGTTTTTGCGTTTTATTGCCCACTT
TTTAGTGGCGTGTCTCTGATCGCTAGCTTCTAATAGGCTATAAATGATTT-TTTTT----GCCCTTTGGTTTTTGCTTTC
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAGTAAAAGACAAAGTTTGAT--T-A-AAAAAATCAAAAATATGTT
CACGAATTTGTGGTAATATAC------A-TTTT-------TTTAATATACAGTGAA-TTTTTTATATACAATGAGCTTTT
TAAATTATATTCACTAAACTTTTTTA--A--CACACTAAATATTTTTTAAATACAAACTTAACCTTTTTT-AATATACGT
AGAACCCTTTTAAATA-TACGGTAAAACATTTTTATAATATACACTAAATAA-TCTTTTAAACACATACTGAACAATTGA
TCATGCATCCAAAAGTGTTAACAATTGTTCGTGG-ATTAAGAAAATGTTCGCCGATTCAAAATAAATAAATCACA
>chr1B_2107
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------------------------------------------------------------------------------AT
ATTACATCTAGATGTGAGATAATATCTCACATCTAAGTAT--GATGTCATCGCCACCTTTTTATTGTTTATCTTATTTGT
TCGATTTTGATTTGTCATAAAGCCTGAAACAAATGAACCAGTTTCGCGCTCATGTCCGCCTCGATGGGCCGGCC--TATA
CGTCCG-------ACAGCTCGTAGT------------GAGGCTAGCTTTTTAAGTTGTGCATCAGCCAGCCGAAGATTCC
TTCTTGCTATATGTGTCTCTCCCTGTGCGTGC----ATGGTAGATCAATAGATCATATTAGATCCGATGGCGACGTAGCG
AGAAGCAGCAAGCACCTTGGTAAGTTGTGTTGTGTCACTACTCGAAGCAAAGGATCAGA-TTCCTTTTTCCAGGAAAAGC
TAGTGATCAGATGTATATCAGTGAATATAAAGTAGTTCTACCATCGAT-TT-GTTAGTTTTTGCGTTTTATTGCCCACTT
TTTAGCGGCGTGTCTCTGGTCGCTAGCTTCTAATAAGCTATAAATGA---TTTTTTTT--GCCCTTTGGTTTTTGCTTTC
CCGTTCCACTCTTTATATTTTATGCATTAGTTTTCAGTAAAAGACAAAGTTTGAT--T-C-AAAAAAACAAAAATATGTT
CATGAATTTGTGGAAATATAC------ATTTTT-------T--AATATACAGTGAACTTTTTTATACACAATGAGCTTTT
TAAATTATATTCACTAAACTTTTTTA--ATACACACTAAATATTTTTTAAATACAAACTTAACCTTTTTT-AATATACGT
AGAACCCTTTTAAATA-TACGGTAAAACATTTTTATAATATACACTAAATAA-TTTTTTAAACACATACTGAACAATTGA
TCATGCATCCAAAAGTGTTAACAATTGTTCGTGG-ATTAAGAAAATGTTAACCGATTCAAAATAAATAAATCACA
>chr6D_2110
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-TTACATCTAGATGTGAGATAATATCTCACATCGAAGTAT--GATGTCAACGCCACCTCCTCATTGTTTATTTTGTTTGT
CCGATTTTGATTTGTCATAAAGCCTAAATCAAACGAACCAGTCTCGCGCTCACGTCCGCCTCGGCGGGCCGGCG--TATA
TGTCCA-------ACATCTCGTAGTGTGTACTAGCAGGAGGGTAGCTTAATACGGTGTGCATCAGCCAGCCGAAGGTTCC
TTCTTGCTACATGTGTCTCTTCCTGTGCGTGC----ATGGTAGATCGATAGATCATATTAGATCGGATGGCCACGCAAGG
AGAAGCAGCAAGCACCTTGGTAAGTTGTGTTGCGTCACAACTCGAAGCTAGCGATCAGATTT-TTTTT-CCATGAAAATC
TAGTGAT---ATGTATATCAGTGAAAATAAAGTAGCTCTACCATCGAT-TT-GTTGATTTTTGCATTTTATTGCCATCTA
TTTAGCGGCGTGTCTCTGACCACTAGCTTCTAGTAGGCTATAAATGATTTGTTTTTTT--GCCCTTTAGCTTTTGCTTTT
CCGTTCCACTCTTTATATTTTATGCATTATTTTTTAATAAAAGACAAAGTTTGATAAT-A-AAAAAATCTGTAACATGTT
CACGAATTTGTGGCAATATACATTTAATTTTTT-------A--AATATACAGTGAACTTTTTTAGATACAATGAAC-TTT
TAAATTATATTCACTAAACTTTCTTA--ATACACACTAA---TTTTTTAAATACAAACTTAACCTTTTTA-AATATACGT
AGAACTATTTTAAATA-TACGGTAAAATATTTTTATAATATATACACTAAATGTTTTTAAAACACATACAGAACAATTGA
TC--GCATCCAAAAGTGTTAAAAATTGTTC-TGG-ATTAAGAAAATGTTCGCCGATTCAAAATAAATAAACCACA
>chr5A_2169
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--------------------------------------------------------------ATTGTTTATCTTGTTTGT
CCGATTTTGATTTTTCATAAAGCCTGAAACAAATGAAACAGTCTTGCACTCACGTCCGCCTCGGTGGGCCGGCCCCTATA
CGTCCGACAGCTCACAGCTCGTAGTGTGTACTAGCAGGAGGCTAGCTTTTTACGGTGTGCATCAGCCAGTCGAAGATTCC
TTCTTGCAACATGTGTCTCTTCCTGTGCGTGC----ATGGTAGATCGATAGATCATATTAGATCGGATGGCGACGCAAGG
AGAAGCAGCAAACACCTTGGTAAGTTGTGTTGCGTCACAACTCAAAGCTAGCGATCAGATTT-TTTTTTCCAGGAAAATC
TAGTGATCAGATGTATGTCAGTGAAAATAAAGTAGCTCTACCATCAAT-TTTGTTGGATTTTGCATTTTATTGCCATCTA
TTTAGCGGTGTGTCTCTGATCGCTAGCTTCTAGTAGGCAACAAATGATTTG-TTTTTT--GCCCTTTTGTTTTTGCTTTT
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAATAATAGACAAAGTTTGAT--A-A-AAAAAATCAAAAACATGTT
CACGAATTTGTGGTAATATACATTTAAATTTTT-------A--AATATACAATGAACTTTTTTAGATACAATGAACATTT
AAAATTATATTCACTGAAAGTTTTTA--ATACACACTAG---TTTTTTTAATACAAACTTAACC-TTTTT-AATATACGT
AGAACCATTTTAAATAATATGATAAAACATTTTTATAATATACACTAAATGT-TTTTTAAAACACACACTGAACAATTGA
TCGTGCATCCAAAACTGTTAAAATTTGTTC-TGG-ATTCAGAAAATGGTCGTCGATTCAAAATAAATAAATCACA
>chr5D_2220
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---------------------------------CGAACCAGTCTCGCGCTCACGTCCGCCTCGGTGGGCCAGCC--TATA
CCCCCG-------ACAGCTCGTAGTGTGTAC--GCAGGAGGCTAGCTTTTTACGGTGTGCATCAGCCAGCCCAAGATTCC
TTCTTGCTACATGTCTCTCTCCCTGTGCGTG----TACGGTAGATCGATATATCATATTAGATCGGATGGCGACGCAAGG
AGAAGCAGCAAGCACCTTGATAAGTTGTGTTGTGTCACTACTCGAAGCTAGCGATCAGATTT-TTTTTTTCAGGAAAAGC
TAGCGATCAGATGTATATCAGTGAAAATAAAGTAGCTCTACCACATCGATTTGTTAGTTTTTGCGTTTTATTGCCATCTT
TTTAGCGGCGTGTCTCTGATCGCTAGCTTATAGTAGGCTATAAATGATTTCTTTTTTTT-GCCCTTTTGTTTTTGCTTTT
CCGTTCCACTCTTTATATTTTATGCATTAATTTTCAA-----GACAAAGTTTGAT--A-A-AAAAAATCAGAAACATGTT
CATGATTTTATGGTAATATAAATTTAATTTTTT-------AT-----TACAATGAACTCTTTTATACACAATGAACTTTT
TAAATTATATTAACTAAACTTTTTTA--ATACACACAAAATATATTTTTCATACAAACTTAACCTTTTTT-AATATACGT
AGAACCATTTTAAATA-TACGGTAAAACATTTTATA---ATATACACTAAATATTTTTAAAACACATACTGAACAATCGA
CCGTGCATCCAAAAGTGTTAAAAATTCTTC-AGGCATTTAGAAAATGTTCGCCGATTCAAAATAAATAAATCACA
>SNPs
-----------------------------------------------------------S--------------------
---------------------------S----------------------------------------------------
-------------------------------------------------S-----------------S------------
-----------------------------S-----------------------S----------------------S---
---------------------------------------------------------------------------S----
-------------------------------------------------------------S----------------S-
-----------------------S--------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------------S--S------------------------------------------------
-----------------------------------S--------------------------------------------
---S--------------S-----------------------S------------------------------SSS----
--------------------S------S-----------SSSSS------------------------------------
--------------------------------------------------------------------------------
------------------------S---------------------------S--S----------------------S-
------------------------------------------------------------S-------------------
-----------------------------------------------------------S---S----------------
------------------------------------------S---------S--S--------------S---------
----------------------------------------------------------------S---------------
-------------------------S--------------------------------------S---------------
---------------------------S----------------------------------------------------
------S-------------------------------------------------------------------------
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--------------------------------------------------------------S-----------------
--------------------------------S-----------------------------------------------
-S------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------------------------------------S-----------------S---------
------------------------------------------------S-------------------------------
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-----------------------------------------------------S--------------------------
--------------------------S-----------------------------------------------------
---------S-------------------------------------------------------------S--------
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--------------------------------------------------S-----------------------------
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>forward_294
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----------------------------------TCAGCACCAATTTCTGCCCA--------------------------
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>reverse_1260
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-----------------------------------------------------------CTCACTGCCTCGCTGGTTAT-
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>forward_669
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----------GTGGCTGGAAATGGAGGCT---------------------------------------------------
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>reverse_2792
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-----------------------------------------------------------------------CTTGCTTTC
CCGTTCCACTC---------------------------------------------------------------------
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---------------------------------------------------------------------------
