>input_sequence_63347
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----------------------------------------------------ATGGCTGCGGCGGCGGCAGAGCGGACGC
CGGTGTTCATGAAGGTGGGAGATCTCAGGCCCGGGACGTCGACCGGCCACACGCTTCTCGTTAAGGTGCTAAGCTCCAA-
GATCAAGACCGAGACCAAGACCGTGGTGACCCGCTTTGGCCCGGCGGCGAGGCCCACGAGGATCGCCGAGTGCCTCGTCG
GTGATGAGACGGGATGCATCCTCTTTACCGCCCGCAACAACCAGGGTAATGCATCCCCTTT-TTCTGTAGTAATTAATTA
ATCTGCTAAATACGTAGCATCTG--------------------TTGTGTTTAAATCTTTGACTCGGGGTGTCTCGCGCTT
ATGCTTTGTAAATTAATGTGCAAAATTGCGCTCCTAGTTATCAAGAATGAGTACTTGATCAATGGTCAGTAGCTAGCATC
AAAATGGAGTAGTGCAGAGTAGACTCCCGCTATTTCGTTTACCCAGCATGCAGTAGCTACATCGCCTTCTCTGAGTCCGT
TTAGGAACTACAATTGTTAGTTCATTGATGGGATCAGTACGTGCGTGCATGCTATACTGCTGTGAGTATGGATACGGACA
GAGACGCAGAGTATTGTCCTTGATTGATCACATTGACCATCCTAGACAATACTAGACGCAGAGTATTAAATAAAAAAAAT
GTTTATTTGAGGAGTCTACTTTGTA-------------------------------------------------------
-------------------------------------------------------------TACGGTTATAATTTCTGAA
CGTAGCAAATTAGATCCTTCCGTAATCTGTTCATTTCATAGAGTTAGACAAATGCATGATTGTCTTACTGTTTTGGTTAG
CATGGTTTTACATGGCAAACATCTAACAGCAGAAATTACATGTGTTTGACAGTTGACATGCTGAAGCCCGGCAACACCGT
TATTCTTTGGGATGCAAAGCTTGGCATGCCCAAGGGGATAATGAAGCTAGCTGTTGACAAACGGGGGCTTGTTGATGTCA
CTGAACCGGCAAGCTTCGATGTGAAGGAGGACAACAATTTCTCACTTGTGGAGTACGAGTATGTACAGGTCTAG------
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>chr3A_1_TraesCS3A01G292600
CAAACTCGCCGCAATGCAATCTTACTTTGGTCTTGGTGGACCATAGTCTCTCCAACACAATATATCAATCCATGTCAGAA
CTTAGAACTGTAGGTCTAAAGCTGCAGTGCATATATGATACTATCGTATGATACTCTTTTCACAGTGCATATTATAAGTT
AGTATCTTATAGATTGTCTCATTTATTGTTAAGCATGACACAATATAAGACAACATTTTATATGATATCATGATATGATA
CAAATCCTCTCTTTTCTCATTTAATTGTGTGTCATCTTAG-AAAAAATGTCTAGTTTAATTGTGTGCCATCTTATAAAAT
A--TCTAGTTAATATGCATGATACACTTCTGATACTCTGATTTGCGGGCAGCCTAAAGCTTATAATCTTACCGGCAATCA
AAACGCAAAAGCCCCCTACCCAAACCTCTCAATTTTCCACCAACGCCCCCGTTAACGACGCCACAGCCAGCCATGTCACC
CCCATCTTCGGGGAGGTCCTGGCTCGGCTGCGGCCTCCCTCACTCATCCTCGGGGCTATGCGGATTGACTGATGCGGAAT
TTTTCACTCAGCTGCCTTTTTTTTTGACATCTAGAGAAACAACCGAGTGAAAAATTAGGCGGATC---------------
--------------------------------------------------------------AAATCAACCGAGGTAAGC
AGCATGAAGACTATATGGACGGCCTCTTTGGAATATGACCAAGATGCAAAATC---------GTCCATCGTTGTGTAGCT
GAGAGCCTGAGACTCGAGGGATCCTCAAGACGTTGGATTCGATGAGCCTTTTTCACCTTTTGCAGATTAAAGCAAAACGG
ATAACAATGGCAACGTCTGATGCAATAACAACTCCTCCGCCCCATCGTTTTCCCT---CTCGACCACGGACTGAGACTCG
TAACCATCCATATTAAATTCACAGCATCGCGTCTAGGGTTTTGGCAGACCAAAGTCCCAACTCGTCGTAATCGTAGCATC
AATTCTTTATCATCCGTCCTCGAGTTTCAATCTGTTTGCTTGTTCCGTTTCCATGGCTGCGGCGGCGGCAGAGCGGACGC
CGGTGTTCATGAAGGTGGGAGATCTCAGGCCCGGGACGTCGACCGGCCACACGCTTCTCGTTAAGGTGCTAAGCTCCAA-
GATCAAGACCGAGACCAAGACCGTGGTGACCCGCTTTGGCCCGGCGGCGAGGCCCACGAGGATCGCCGAGTGCCTCGTCG
GTGATGAGACGGGATGCATCCTCTTTACCGCCCGCAACAACCAGGGTAATGCATCCCCTTT-TTCTGTAGTAATTAATTA
ATCTGCTAAATACGTAGCATCTG--------------------TTGTGTTTAAATCTTTGACTCGGGGTGTCTCGCGCTT
ATGCTTTGTAAATTAATGTGCAAAATTGCGCTCCTAGTTATCAAGAATGAGTACTTGATCAATGGTCAGTAGCTAGCATC
AAAATGGAGTAGTGCAGAGTAGACTCCCGCTATTTCGTTTACCCAGCATGCAGTAGCTACATCGCCTTCTCTGAGTCCGT
TTAGGAACTACAATTGTTAGTTCATTGATGGGATCAGTACGTGCGTGCATGCTATACTGCTGTGAGTATGGATACGGACA
GAGACGCAGAGTATTGTCCTTGATTGATCACATTGACCATCCTAGACAATACTAGACGCAGAGTATTAAATAAAAAAAAT
GTTTATTTGAGGAGTCTACTTTGTA-------------------------------------------------------
-------------------------------------------------------------TACGGTTATAATTTCTGAA
CGTAGCAAATTAGATCCTTCCGTAATCTGTTCATTTCATAGAGTTAGACAAATGCATGATTGTCTTACTGTTTTGGTTAG
CATGGTTTTACATGGCAAACATCTAACAGCAGAAATTACATGTGTTTGACAGTTGACATGCTGAAGCCCGGCAACACCGT
TATTCTTTGGGATGCAAAGCTTGGCATGCCCAAGGGGATAATGAAGCTAGCTGTTGACAAACGGGGGCTTGTTGATGTCA
CTGAACCGGCAAGCTTCGATGTGAAGGAGGACAACAATTTCTCACTTGTGGAGTACGAGTATGTACAGGTCTAGGTCTAC
GTGTAAGAGTGGACTTATTTCGCTCTTAATCAGAACAAGTGCTTTCCAATCCTGCTTTTTTTTTCTTTTTTGAAAAGGGG
TCGGGCCTCGGCCTTTGCATCAGAACGATGCATACGACCATATTATTAATAATAAGCAAAAAAGTTCTACAAAGGTCTCC
AGGTCTCAAAAATAAAATAAAAAAGCTCACAAAGAGCATAAGCATCATGACAGGAAAGCCACAACCGGCAGGCAAAAATA
TAAGATATAAAACTAAAAACTTATTCTATTAGATAACCGCCATCCAAACCGGTTGAAGATATCCTGAGTTACCGTCTCTT
ATCGGATAGATCCAGTAACCAAATGCTCCCTGACCTCCGTCGGAGTGAGTAGCGACCACATACAGATAAGTGTAGTGGCC
CGGAAGATAATCTGCAAGAAATGAATTTTTGTTGTTCTATTAA-AAACCAAATCGTTTCTGCAGTTCCAGACAGCCCATA
ATAAAGCACATACTCCTACACGGATATGTCTCGCAGTATCGGGATCTAACCCATCTAGCCACGTCCCAAGTAACGTGTTG
ATGGTATTCGGAGGAGTAATATTAAATGCTAAGTGCACTGTCCGCCATT-TTTTTTTGCCAAGGGACAGTCGAGAAAAAG
ATGTTTGATGGATTCGTCCTTATCACAGAAACTACATCTTGTAGATCCTGGCCAATTGTGTTTTGCCAAATTGTCCTTCG
TTAGAATAATTTGTTTATGTACAAACCACATAAACACTTTGATTTTTAAAAGTACTTTGACTTTTCAGACATGTTTCGAA
CGAGGAATAGCACTAGAGTTGATAACATCCAAA-TACATGGATTTA-CCGAAAACTCTCTATTCCTTGTTAGTTTCCAGC
TCAATTGGTCAGGTTGTTGAGAAAGGTGGACTTCCATCAATCTTCGCACTAAGTGGAGCCAAGCTTCCCAACGATTGCCC
GCTAGAGTACTTCTAAATTGGAAATTCAGAGGATTGGA
>chr3B_160
TAGTATCT------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TAGATTGTCTCATTTATTATCAAGCATGACACAATATAAGACAACATTTTATATGATATCATGACATGGTA
CAAATCCTTTCTTTTCTCATTTAATTGTGTGTCGTCTTATAAAAAAATGTCTAGTTTAATTATGTGTCATCTTATAAAAA
ATGTCTAGTTTATATGCATGATACACTTTTGATACTCTGATTTGCGGGCAGCCTAAAGCTTATAATCTTACCGGCAATCT
AAACACAAAAGCCCCCCACCCAAACCTCTCAATTTTTCACCAACGCCCCCGTTAACGACGCCACAGCCAGCCACGTCG-C
CCCGTCTTCGGTGCGGTCCTGGCTCGGCTGCGGTCTCCCCCACTCATCCTCGGGGCTATGCGGATTGACTGTTGCGTAAT
TTTTCACTCAACTGCCTTTTTTTTT-ACATCTACAGAAACAACCGAGTGAAAAAATAGGCATCAGTAAATTTTTCTTTTC
ACTCGGCTGCTTAATAGCCAAGGCGGGTCAAATCAACTGAGGTAAGTTCCCGCCAAAAAAAAAAATCAACTGAGGTAAGC
AGCACGAAGACTATACGGACGACCTCTTTGGAATACAACCAAGATGCAAAATCGTGGAAATTGTCCATCGTTGTGTAGCT
GAGAGCCTGAGGCTCAAGGGATCCTCAAGACGTTGGATTCGATGAGCCTTTTTCACCTTTTGCAGATTAAAGCAAAACGG
ATAACAATGGCAACGTCTGATGCAATAACAACTCCTCCGCCCCATCGTTTGTGTCCTCCTCGACCACGGACTGAGACTCG
TAACCATCCATAATAAATTCACAGCATCGCTTCTAGGGTTTTGGCAGACCAAAGTCCCAACTCGTCGTAATCGTAGCATC
AACTCTTTATCATCCGTCCTCGAGTTTCTATCTGTTTGCTTGTTCCGTTTCCATGGCTACGGCGGCGGCAGAGCGGACGC
CAGTGTTCATGGTGGTGGGAGATCTCAGGCCCGGGACGTCGACCGGCCACACGCTTCTCCTTAAGGTGCTAAGCTCCAAA
GATCAAGACCGAGACCAAGACCGTGGTGACCCGCTTTGGCCCGGTGGCGAGGCCCACGAGGATCGCCGAATGCCTCGTCG
GCGATGAGACTGGATGCATCCTCTTTACCGCCCGCAAGGACCAGGGTAATACATCCCCCTTTTTCT-TAGTAATTAATTA
ATCTGCTAAATACGTAGCATCTGGTAACCGGCATCATGTGTTGTTGTGTTTAAATCTTTGACTCGGGGTGTCTCGTGCTT
ATGCT---TAAATTAATGTGCAAAATTGCA--------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GAGTATGGATACGGGCA
GAGACACGGAGTATTGTCCTTGATTGATCACATTGACCATCCTAGACAATACTAGACGCAGAGTATTAAATAAAT-AAAT
GTTTATTTGAGGAGTCTACTTTGTA-------------------------------------------------------
-------------------------------------------------------------TACGGTTATAATTTCTGAA
CGTAGCAAATTAGATCCTTCCGTAATCTGTTCATTTCATAGAGTTAGACAAATGCATGATTGTCTTACTGTTTTGGTTAG
CATGGTTTTACATGGCAAACATCTAACAACAGAAATTACATATGTTTGACAGTTGACATGCTGAAGCCCGGCAACACCGT
TATTCTTTGGGATGCAAAGCTTGGCATGCCCAAGGGGATAATGAAGCTAGCTGTTGACAAACGGGGGCTTGTTGAAGTCA
CTGAACCGGCAAGCTTCGATGTGAAGGAGGACAACAATTTCTCACTTGTGGAGTACGAGTATGTACAGG------TCTAC
GTGTAAGAGTGGACTTATTTCGCTCTTAATCAGAACAAGTGCTTTCCAAACCTGCT------------------------
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>chr3D_647
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------AAGACTATACTGACGACCTCTTTGGAATAGGACCAAGATGCA---------AAATCGTCCATCGTTGTGTAGCT
GAGAGCCAGAGACTCATGGGATCCTCAAGACGTTGGATTCGATGAGCCTTTTTCACCTTTTGCAGATTAAAGCAAAACGG
ATAACAATGGCAACGTCTGATGCAATAACAACTCCTCCGCCCCATCGTT-GTGTCCTCCTCGACCACGGACCGAGACTCG
TAACCATCCATAATAAATTCACAGCATCGTGTCTAGGGTTTTGGCAGACCAAAGTCCCAACTCGCCGTAATCGTAGCATC
AACTCTTTATCATCCGTCCTCGAGTTTCTATCTGTTTGCTTGTTCCGTTTCCATGGCTACGGCGACGGCAGAGCGGACGA
CGGTGTTCATGAAGGTGGGAGATCTCAGGCCCGGGACGTCGACCGGCCACACGCTTCTCGTTAAGGTGCTAAGCTCCAA-
GATCAAGACCGAGACCAAGACCGTGGTGACCCGCTTTGGCCCAGCGGCGAGGCCCACGAGGATCGCCGAGTGCCTCGTCG
GCGATGAGACGGGATGCATCCTCTTTACCGCCTGCAACGACCAGGGTAATACACCCCCCTTTTTCTGTAGTAATTAATTA
ATCTGCTAAATACGTAGCATCTGGTAACCGGCATCATGTGTTGTTGTGTTTAAATCTTTGACTCGGGGTGTCTCGCGCTT
ATGCTTTGTAAATTAATGTGCAAAGTTGCGCTCCTAGTTATCAAGAATGAGTACTTGATCAATGGTCAGTAGCTAGAATC
AAGAATGAGTAAAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GTCCTTGAATAATCACATCGACCATCCTAGACAATACTAGACGCAGAGTATTAAATAAAT-AAAT
GTTTATTTGAGGAGTCTACTTTGTACTCTCTTCCGTCCGAAAAACTTGTCCCAAACTTGTCCCTCAAATGGATGTATCTC
GCACTAACTTGGTGCTAGATACATTCATTTGAGGGACAAGCTTTTTCGGACGGAGGGAGTATACGGTTATAATTTCTAAA
CGTAGCAAATTAGATCCTTCCGTAATCTGTTCATTTCATGGAGTTAGACAAATGCATGATTGTCTTACTGTTTTGGTTAG
CATGGTTTTACATGGCAAACATCTAACAACAGAAATTACATATGTTTGACAGTTGACATGCTGAAGCCCGGCAACACCGT
TATTCTTTGGGATGCAAAGCTTGGCATGCCCAAGGGGATAATGAAGCTAGCTGTTGACAAACGGGGGCTTGTTGAAGTCA
CTGAACCGACAAGCTTCGATGTGAAGGAGGACAACAATTTCTCACTTGTGGAGTA------------------------C
GTGTAAGAGTGGACTTATTTCGCTCTTAATCAGAACAAGTGCTTTCCCAACCTGCT------------------------
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>chr2A_2065
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------------------------------------------------------CTTTTTTCTTTTTTTTGAAAAAGGGG
CCAGGCCCCGGCCTCTGCATCAGAACGATGCACACGACCATATTATTAATAATAAG-CAAAATGTTCTACAAAGGTCTTG
AGGTCTCAAAAGCAAAAAAAT----CTCACAAAGAGCATAAGCAACATGACAGGAAAGCCACAACTGGCAGGCAAAAATA
TAAGATAGGAAACTAAAAACCTACCCTATTACATGACCGCCATCCAAACCGGTTGAAGATATCCCGAGCTACCGTCTCCC
ATCGGATACATCCAGTAACCAAACTCTCCCTGTCCTCCGTCGGAGTGAGTAGCGACCACATACGGATGAGAGTAGTGGCC
CGAAAGATAACCTGCAAGAAATGAATTTTTGTTGTTCTGTTAA-AAACCAAATCATTTTTGCAGTTCCAGACTGCCCACA
ATAAAGCACATACTCCTACATGGACATGTCTCACAGTTTCGGGATCTAACCGATCTAACCACGTCCCAAATAACGTGTTT
ATGGTATTCGGAGGGGTAATATTAAATGCTAAGTGCACTGTCCGCCACAATTTTTTTGCCAAGGGATAGTCAAGAAAGAG
GTGTTTGATGGATTCGTCCTTATCACAGAAACTACATCTTGTAGATCCTGTCCAATTGTGTTTTGCCAAATTGTCCTTAG
TTAGAATGACTT-TTTATGTACAAACCACATAAACACTTTGATTTTTAAAGGTACTTTGACTTTCCACACATGTTTCGAA
CGAGGAATAGCACTAGAGTTGATAACATCCAAA-TACATGGATTTAACCAAAAACTCTCCATTCTTTGTTAGTTTCCAGC
TCAATCAGTCGGGTTGTTGAGAAAGGTGGACCTCCATCAATCTTTGCACTAAGTGGAGCCAAGCTTCCCAACAATTTCCC
GCTAGAGTCCTCCTGAATTGGATATTCAGAGGATTGGA
>chr7A_2066
TTTTTTTTTCTTTTT-----------------------------------------------------------------
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---------------------------------------------------------------------TCGAAAAGGGG
CCAGGCCCCGGCCTCTGCATCAGAATGATGCATACAACCATATTATTAATAATAAG-TGAAATGTTCAACAGAAGTCCTC
AGGTCTCAAAAGT-A----AAGAAGCTCACAAAGAGCAAAAGCAACATGACAGGATAGCCACAACCGTCAGGCAAAAATA
TAAGATAGGAAACTAAACACCTATCCTATTACATGACCGCCATCCAAACCGGTTGAAGATATCCCGAGCTACCATCTCCC
ATCGGATAGATCCAGTAACCAAACGCTCCCTGGCCTCCGTCGGAGTGAGTAGCGACCACATATGGATGAGTGTAGTGGTC
CGGAAGATAACCTGCAAGAAATGAATTTTTGTTGTTCTGTTAA-AAACCAAATTGTTTCTGCAGTTCCAGACTGCCCATA
ATAAAGCACATACTCCTACATGGATATGTCTCGCAGTTTCAGAGTCTAACCCATCTAACCACGTCCCAAATAACGTGTTG
ATGTTATTCGAAGGAGTAATATTAAAAGCTAGGTGCACTGTCCGCCACAATTTTTTTGCCAAGGGACATTCGAGAAAGAG
GTGTTTGATGGATTCGTCCGAATCACAGAAGCTACATCTTGTAGATCCTGTCCAATTGCGTTTTGCCAAATTGTCCTTAG
TTAGAATGACTTGTTTATGGCCAAACCACATAAACACTTTGATTTTTAAAGGCACTTTGACTTTCCACACATGTTTTGAA
CGAGGAATGGTGCTAGAGTTGATAACATCCAAA-TACATGAATTTAACCGAGAACTCTCCATTCTTTGTTAGTTTCCAGC
TCAACTGATCGGGTTGTTGAGAAAGGTGGACCTCCATCAATCTTCCCACAAGGTGGATCCAAGCTTCCCAATGATTTCCC
GCTAGAGTCCTCCTGAATTGAATATTTAGAGGATT---
>chr7A_2067
TTTTTTTTCTTTTTT-----------------------------------------------------------------
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---------------------------------------------------------------------CCGAAAAGGGG
TCAGGCCCCGGCCTCTGCATCAGAACGATGCATACGGCCAAATTATTAATAAAAAG-AAAAATGTTCAACAAAAGTCTTC
AGGTCTCAAAAGT-A----AAGAAGCTCACAAAGAGCAAAAACAACATGACAGGATAGCCACAACCGGCAGGCAAAAATA
CAAGATAGGAAACTAAACACTTATCCTATTACATGACCCCCATCCAAACCAGTTGAAGATATCACGAGCTACTGTCTCCC
ATCGAATAGATCCAGTAACCAAACGCTCCCTGACCTCCGTCGGAGTGAGTAGCGGCCACATACGGATGAGTGTAGTGGCC
CGGAAGATAACCTGCAAGAAATGAATTTTTGTTGTTCTATTAA-AAACCAAATCGTTTCTGCAGTTCCAGACTGCCCATA
ATAAAGCACATACTCCTACACGGATATGTCTCGCAGTTTCAGAATCTAACTCATCTAACCACGTCCCAAATAACGTGTTG
ATGGTATTCGGAGGAGTAATATTAAATGCTAGGTGCACTGTCCGCCACAAATTTTTTGCCAAGGGACAGTCGAGAAAGAG
ATGTTTGATGGATTCGTTCTTATCACAGAAACTACATCTTGTAGATCATGTCCAATTGCATTTTGCCAAATTATCCTTAG
TTAGAATGACTTGCTTATGTACAAACCACATAAACACTTTGATTTTTAAAGGCACTTTGACATTCCACACATGTTTCGAA
CGAGGAATAGCACTAGAGTTGATAACATCCAAA-TACATGGATTTAACCGAAAACTCTCCATTCTTTGTTAGTTTCCAGC
TCAACCGATCGGGTTGTTGAGAAAGGTGGACCTCCATCAATCTTCGCACTAGGTGGAGCCAAGCTTCCCAACGATTTCCC
GCTAGAGTCCTCCTGAATTGGATATTCAGAGGATTGGA
>chr1D_2070
T------TTTTTTTT-----------------------------------------------------------------
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---------------------------------------------------------------------TCGAAAAGGGG
TCAGGCCCCGACCTCCGCATCAGAACAATGCATACGGCCATATTATTAATAAG-AG-CAAAATTTTCTACAAAGGTCTTC
AGGTCTCAAAAGCAA----AAAAAGCTCACAAAGAGCAAAAGCAACACGACAGGAAAGCCACAACCGACAGGCAAAAATA
TAAGATAGGAAACTAAAAACATATCCTATTACATGACCGCCATCCAAACCGGTTGAAGATATCCCGAGCTACCGTCTCCC
ATCGGATAGATCTAGTAACCAAACGCTCCCTGGCCTCCGTCGGAGTGAGTAGCGACCACATACGGATGAGTGTAGTGGCC
CAGAAGATAACCTGCAAGAAATGATTTTTTGTTATTCTGTT-A-AAACCAAATCGTTTCTGCAGTTCCAGACTGCCCATA
ATAAAGCACATACTCCTACATGGATATGTCTCGCAGTTTCGGGATCTAACCCATCTAACCACGTCCCAAATAACGTGTTG
ATGGTATTCGGAGGAGTAATATTAAATGCTAGGCGCACTGTTCGCCACAATTTTTTTGCCAAGGGACAGTCGAGAAACGT
GTGTTTGATGGATTCGTCCTTATCATAGAAACTACATCTTGTAGATCCTGTCCAATTGCGTTTTGCCAAATTGTTCTTAG
TTAGAATGACTTGTTTATGTATAAACCACATAAACACTTTGATTTTTAAAGGCACTTTGACTTTCCACACATGTTTCGGG
CGAGGAATAGCACTAGAGTTGATAACATCCAAA-TATATGGATTTAACCGAAAACTCTCCATTCTTTGTTAGTTTCCAAC
TCAACCGGTCGGGTTGTTGAGAAAGGTGGACCTGCATCAATCTTCGCACTAAGTGGAGCCAAGCTTCCCAACGATTTCCC
GCTAGAGTCCTCCTGAATTGGATATTTAGAGGATTTGA
>chr4A_2070
T------TTTTTTTT-----------------------------------------------------------------
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---------------------------------------------------------------------TCAAAAAGGGG
TCAGGCCCTGCTCTTTGCATC---ACGATGCATACGGTCATATTATTAATAAAAAA-CAAAATGTTCTACAAAGGTCTTC
AGGTCTCAAAAGT-A----AAAAAGCCCACAAAGAGCAGAAGCAACATGACAGGAAAGCCACAACCGGCAGGCAAAAATA
TAAGATAGGAAACTATAGACCTATCCTATTACATGACCGTCATCCAAACCGGTTGAAGATATCCCGAGTTACCGTCTCCC
ATCGGATAGATCCAGTAACCAAACGCTCACTGGCCTCCGTCGGAGTGAGTAACGACCGCATACGGATGAGTGTAGTGACC
CAGAAGATAACCTGCAAGAAATGAATTTTTGTTGTTCCATTAA-AAACCAAATTGTTTCTGCAGTTCCAGACTGCCCATA
ATAAAGCACATACTCCTACACGGATATGTCTCGCAATTTTGGAATCTAACCCATCTAACCACGTCCCAAATAACGTGTTG
ATGGTATTCGGAGGAGTAATATTAAATGCTAAGTGCACTGTCCGTCATAATTTTTTTGCCAAGGGACAGTCGAGAAAGAG
GAGTTTGATGAATTCGTCCTTATCACACAAATTACATCTTGTAGATCCTGTTCAATTGCGTTTTGCCAAATTGTTCTTAG
TTAGAATGACTTGTTTATGTACAAACCACATAAACACTTTGATTTTTAAAGGCACTCTGACTTTCCATACATGTTTCGAA
TGAGAAATAGCACCAGAGTTGATAACATCCAAA-TACATGGATTTAACCGAAAACTCTCCATTCTTTGTTAGTTTCTAGC
TCAACCGA--AGGTTGTTGAGAAAGGTGGACCTCTATCAATCTTCGCACTAGGTGGAGCCAAACTTCCCAACGATTTCCC
GCTAGAGTCCTCCTGAATTGGATATTTAGAGGATTG--
>chr2A_2072
TTTTT---------------------------------------------------------------------------
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--------------------------------------------------------------------TTTTAAAAAGGG
TTAGGCCCCGGCTTCTGTATCAGAATGATGCATACGGCCATATTATTAATAAAAAAGCAAAATGTTTTATAAAGGTTTTC
AGGTCTCAAAAGT-A----AAAAAGCT-ACAAAGAGCAGAAGCAACATGACAGGAAAGCCAC-ACCGACAGGCAAAAATA
TAAGATAGGAAACTAAAGACCTATCCTATTAAATGACCGTCATCCAAACCGCTTGAAGATATCCCGAGCTTCCGTCTTCC
ATC-GATAGATCCAGTAACCAAACGCTTCTTGGCCTCCGTCGGAGTGAGTAGCGACCACATACGGATGAGTGTAGTGGCC
CGGAAGATAACCTGCAAGAAATGAATTTTTGTTGTTCTATTAA-AAACCAAATCGTTTCTGCGGTTCCAGATTGCCCATA
ATAAAGCACATACTCCTACATGGATATGTCTTGCAGTTTCGGAATCTAACCCATCTAACCACGTCCCAAATAATGTGTTG
ATGGTATTAGGAGGAGTACTATTAAATGCTAAGTGCACTATCCGCCACAATTTTTTTGCCAAGGGACAGTCGAGAAAGAG
GTGTTTGATGGATTCGTCCTTATCACATAAACTACATCTTGTAGATCCTGTCCAATTGAGTTTTGCCAAATTGTCCTTGG
TTAGAATGACTTGTTTATGTACAAACCACATAAACACTTTGATTTTTAAAGGTATTTTGACTTTCCACACATGTTTCAAA
CGAGGAATAGCACTAGAGTTGATAACATCCAAA-TACATGGATTTAACCAAAAACTCTCCATTCTTTGTTAGTTTCTAGC
TCAACCGATCAGGTTGTTGAGAAAGGTGGACCTCCATCAATCTTCGCACTAGGTGGAGCCAAGCTTCCCAACGATTTCCC
GCTAGAGTCCTCCTGAATTGGATATTTAGAGGATTGGA
>chr7A_2075
CT---------TTTT-----------------------------------------------------------------
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---------------------------------------------------------------------TCGAAAAGGGG
TCGGGCCCCGGCTTCTACATCAGAACGATGCATACGGCCAAATTATTAATAAACAA-CAAAATGTTCTACAAAAGTCT--
AGGTCTCAAAAGT-A----AAGAAGCTCACAAAGAGCAAAAACATCATGACAAGATAGCCACAACCGGCAGGCAAAAATA
TAAGATAGGAAACTAAACACCTATCCTATTACATGACCGCCATCGAAACTGGTTGAAGATATCCCAAACTAACGTCTCCC
AACGGATAGATCCAGTAACCAAACGCTCCCTGGCCCCCGTTGGAGTGAGTAGCGACCACAGACAGATGAGTGTAGTGGCC
CGGAAGATAACCTGCAAGAAATGAATTTTTGTTGTTCTGTT-AAAAACCAAATCGTTTCTGCAGTTCCAGACTGCCCATA
ATAAAGCACATACTCCTACACGGATATGTCTCGCAGTGTCGGAATCTAACCCATGGAACCACGTCCCATATAACGTGTTG
ATGGTATTTGGAGGAGTAATATTAAAAGCTAAGTGCACTGTCCGCCACAAATTTTTTGCCAAGGGACAATCGAGAAAGAG
GTGTTTGATGGATTCGTCCTTATCACAGAAACTATATCTTGTAGATCCTGTCCAATTGCGTTTGGCGAAATTGCCCTTAG
TTAGAATGACTTATTTATGTACAAATCACATAAACACTTTTATTTTCAAAGGCACTTTGACATTGCACACATGTTTCGAA
TGAGGAATATCACTAGAGTAGATAACATCCAAA-TACATGGATTTAACCGAGAACTCTCCATTCTTTGTTAGTTTCCAAC
TCAGCCGATCGGGTTGTTGAGAAAGGTGGACCTCCATCAATCTATGCACTAAGTGGAGCCAAGCTTCCCAACGATTTCCC
GCTAGAGTCCTCCTAAATTGGATATTCAAAGGATTGGA
>chr3A_2076
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-----------------------------------------------------------------TTTTTTGAAAAGAGG
TCAGGCCCTGGTCTCTGCATCAAAACGATGCATACGGCCAAAATATCAATAAAC-AGCAAAATGTTCTACAAAAGTCTTC
AGGTCTCAAAAGT-A----AAGAAGCTCACAAAGAGCAAAAATATCATGACAAGATAGCCACAACCGGCAGGTAAAAATA
TAAGATAGGAAACTAAACACCTATTCTGTTACATGACCGCCATCCAAATCGGTTGAAGATATCCCAATATACCGTCTTCC
AACGTATAGATTCAGTAACCAAATGCCCCCTGACCTCCGTCGGAGTGA-TAGCGACCACATACGGATGAGCGTAGTGGTC
CGGAAGATAACCTGCAAGAAATGAATTTTTGTTGTTATGTT-AAAAACCAAATCGTTTCTGCAGTTCCAGACTGCCCATA
ATAAAACACATACTCCTACACGGATATGTCTCGCAGTGTCGGAATCTAACCCATCTAATCACGTCCCAAATAACGTGTTG
ATGGTATTCGGAGGAGTAATATTAAAAGCTAAGTGCACTGTCCGCCACAAATTTTTTGCCAAGGGACAATCGAGAAAGAG
GTGTTTGATGGATTTGTCCTTATCACAGAAACTACATCTTGTAGATCATGTCCAATTGTGTTTTGCCAGATTATTCTTAG
TTAGAATGACTTGTTTATGTACAAACCACATAAACACTTTTATTTTCAAAGACACTTTGACATTCCACACATGTTTCGAA
CGAGGAATAGCACTAGAGTTGATAACATCCAAAATACATGGATTTAACCAAGAACTCTCCATTCTTTGTCAGTTTCCAGC
TCAGTCGATCGGGTTGTTGAGAAAGGTGGACCTCCATCAATCTACGTACTAAGTGGAGCCAAGCTTCCCAATGATTTCCC
ATTAGGGTCCTCCTGAATTGGATATCCAGATGATTGGA
>chr7A_2084
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-------------------------------------------------------------------------AAAGGGG
TCAGGCCCCGACCTATACATCAGAACGATGCATACAACCATATTATTAATAATAAT-CAAAATGTTCAGCAAAAGTCTTC
AGGTCTCAAAAGT-A----AAGAAGCTCACAAAGAGCAAAAGCAACATGACGGGAGAGGCCCAACCGGCAGGCAAAAATA
TAAGATAGGAAACTAAACACATATCCTATTACATGGCCGCCTTCCAAACCGGTTGAAGATATCCCGAGCTACCGTCTCCC
ATCGGATAGATCCAGTAACCAAACACTACCTGGCCTCCGTCGGAGTGAGTAGCGACCCCATACTGATGAGTGTAGTGGCC
CGGAAGATAACCTGCCAGAAATGAATTTTTGTTATTCTGTT-AAAAACCAAATCGTTTCTGCAGTTTCAAACTGCCCATA
ATAAAGCACATACTCCTACACGAATATGTCTCGTAGTTTCGGATTCTAACCCATCTAACCACGTCCCAAATAATGTGTTG
ATGGTGTTAGGAGGAGTAATATTAAAAGCTAAGTGCACTGTCATCCACA-ATTTTTTTCCAAGGGACAGTCGAGAAAGAG
GTGTTTGATGGATTCGTCCTTATCACAGAAACTACATCTTATAGATCCTGTCCAATTCCTTTTTGCCAAATTGTCCTTAG
TTAGAATGACTTGTTTATGAACAAACCACATAAACACTTTGATTTTTAAAGGCACCTTGACTTTTCGCACAGGTTTCGAA
CGAGGAATAGCGCTAGAATTGATAACATCCAAA-TACATGGACTTAATCGAAAACTCTCCATTCTTTGTTAGTTTCCAGC
TCAACTGATCGGGTTGTTGAGAAAGGTGGACCTCCATCAATCTTCGCACAAGTTGGAGCCAAGCTTCCCAACGATTTCCC
GCTAGAGTCCTCCTGAATTGAATATTCAGAGGATT---
>SNPs
--SSS--S--SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS------------------S-S-------------------------------------------S---S--
--------S------------------------S-----S---------------------S----S------------S
----------S-----------------S--------------------------------------------------S
----S-----------S-------------------S------------------------------------S---SS-
---S-------S-S-------------------S-----S-------------------------------S----S---
----------S--------------S-------S--------------------S-----SSSSS---------------
----------------------------------------------------------------------S---------
----S----------S-----S-------------S--------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------SSSSS-------------------------
------------S-------------------------------------------------------------------
--S-------------------------S-----------------------------S---------------------
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-S------------------------------------S-----------S-------S---------------------
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----------------------------------------------------------------------------S---
--S-SS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S--
-----S-S------------------------------------------------------------------SS----
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----------------------------S------------S--------------------------------------
---------------------------------------------------------------------------S----
---------------------------------------------------------------------SSSSSS-----
-------------------------------------------------S-----------S--S---------------
-------S------------------------------------------------S-----S---------------S-
-----------S-----S--------------------------------------------------------------
-------SS----------------------S--S-----------------------------S-------------SS
-------------------------------------------------------------------S------------
----------S-------------------------------------------------------------S-------
-------------------------------------S-------------------S-----------S----------
------------------------------------------------S----------------------------S--
--------------------------------------------------S---------------------------S-
-------S-S----------------------------------------S----------------S------------
-----------------------------------------------------------S----S---------------
-------------------------------S--------------------------------------------S---
--------S--S----------S---------------
>forward_552
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----------------------------------------------------GGGCTATGCGGATTGACTGA--------
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>reverse_1555
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----------------------------------TCGTTTACCCAGCATGCAGT--------------------------
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>forward_1552
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------------TGCAGAGTAGACTCCCGCTA------------------------------------------------
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>reverse_2512
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-------------------------------GATAACCGCCATCCAAACCG-----------------------------
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