>input_sequence_63345
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------------ATGTCGCATCGGATCCTCAACACCTCCAAGCCCACGCTGCCGCCGGCGCCGCCGCCTCAGCTGATCCA
CCACCCGCCCCAGCAACCGACAGCACCGAAGCTCGGCCGCCGTGCCGCCGCGGTCGCGGTCGCCATCGCGGCCTCGCCGG
CACTCCTCGGCGCCGTCTCCCCGTCCGCCCGGGCGCAGGAAGCGGCAGCAGCAGCAGCGTCGGCACCCTGCATCGACGAG
CTGCCGATCACGGCCAAGGCGTTCCTGGACGTGTCCATCGGCGGCGAGCCGGCGGGCCGCATCACGGTGGGCCTGTTCGG
CGACGCGGCGCCGGCCGGCGCGGCCCGGTTCCTGTCGCTCGCCACGGGCGTCGGGTACCGGCGCAAGGAGTTCGTGAAGG
TGGTGCCGGGCTACGTGCAGCACGCCGGCGTGGTCTCCTACCCGGTCATCCCCGCGGTGACCGACCGGCTGGCCGCCGAG
ATGGAGGCCGCGCGCGCGCGGTGCGTTGGCGGCGGCG------CGATGAACGCGGCGGGGGCGGTGTCGATCGTGGTGCG
GGACCCGAGCCTGCCGCCGCCGAAGCCGAAGCTGGTGGCGCGGGGCGGGCGGCTGAAGATCGAGGAGGAGCAGGTGGGCG
TGGTGCCCAACGGCACCGAGTTCGTGATCGCCACCAGGGACTCCCCCGAGCTGGACGCGTCGGCGCTGGTGGTGGGCCGC
GTCGTCGCCGGCATGGACGTCGTCGGCAGGATCGCCGCCGTGGCCACCGTCAAGGACAACACCGGCTCGGCCTACTTCAA
GTCAGTGCTACGCTAG--TTCTCGCTCTTTCTTGCCGCAAGCAAAATTCACCGGCCTTCTTCTGTCCAAGAAGAAGACT-
--------GCATCTTTTTTA-----CGATCGAGAACGAACGTGATTTTGCAGGGTGGCGAAGCTGATCGGGGACAAGAGA
GCGGTGGTCGCAGAGCGAGGGTTCAACCGCCCCTACACCAAGATCCTAGTAACCAACTGTGGAGTCCTTGAG---CA---
GTAG----------------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G005900
ACATCCATTGTCGGCGACGTTTTTTTGCTAGAAGCAGCCCTAAATTTTGCTAGAACCAGCTAGATCGTTTTGCTACATTG
AAACTATTTTGGAGATTGTTGTTGTGTGGTTTTTTTTTTGCTGGAACCAGTGTTTTTTTGGTTGGAACTGACT----TTT
TTTTCTTCAACTGGCCACCAGAGTTGTTTTTCCTTCGATCGTTTTTTGATCAGAACACGAATGTGCTAGTCGACGATGGC
GGCGACTGTGGGACAATGACACGAGAGATGTTGCAACCATGGTGACCGCGCGCTGGAGCCAACAGGCGCCAGAGATGCAT
CCATGGTGACCGCGGTGTGGGATTCAGTTG------TGCTCCAATCCCGGTGGTAGGGACGGGGACCTCGTCGGTCCTCG
CCGGGCATGTCCACAAACGGCGGGGCAAACGCCACCTCTTGAGGGTTGGAAGCGGCAAGCCGGGAGACGGCGCCATGCGC
GTGGTGGGCGTGTGGGTCTTTCC-TTTTTTTTCTACGATCGGAGTGAGAAAGAAGACGACATGGAGAGAGGACATGAGGA
TCAGATCTAACAGCTACCAGATGGCTAAATCGCACGCTTGAAGGCCGATCGGCCCAAATTTGGGGCGACGCGCCGGCGCC
TAGCACTGCCCTTTAGACCAATATTATTTACATGG---------------------------------------------
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----------------------------------------------------------------------------CTAA
GATAATCTAAAGTTCCCCTTTTTTATGCATATACTACTCCCTCCGTTTCTAAATATTTGTCTTTCTAGACATTTCACATG
ACTACTACATACGGATGTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTTTGTATGTAGTCACTTGTTGAA
ATACCTAGAAAGACAAGTATTTAGGAAGCGGAGGGAGTAGTGGAGTATCTGCATGCCTGGTTTATTCAGCCTATGCAAAT
GCAGACCATACACTTGAGATAGGAAATGGATTTGGGTCCTCATTCAGACGCGGCAAGGGCGCCGTCCACTCCATCCCGCA
GCAGCAGCAGCCATGTCGCATCGGATCCTCAACACCTCCAAGCCCACGCTGCCGCCGGCGCCGCCGCCTCAGCTGATCCA
CCACCCGCCCCAGCAACCGACAGCACCGAAGCTCGGCCGCCGTGCCGCCGCGGTCGCGGTCGCCATCGCGGCCTCGCCGG
CACTCCTCGGCGCCGTCTCCCCGTCCGCCCGGGCGCAGGAAGCGGCAGCAGCAGCAGCGTCGGCACCCTGCATCGACGAG
CTGCCGATCACGGCCAAGGCGTTCCTGGACGTGTCCATCGGCGGCGAGCCGGCGGGCCGCATCACGGTGGGCCTGTTCGG
CGACGCGGCGCCGGCCGGCGCGGCCCGGTTCCTGTCGCTCGCCACGGGCGTCGGGTACCGGCGCAAGGAGTTCGTGAAGG
TGGTGCCGGGCTACGTGCAGCACGCCGGCGTGGTCTCCTACCCGGTCATCCCCGCGGTGACCGACCGGCTGGCCGCCGAG
ATGGAGGCCGCGCGCGCGCGGTGCGTTGGCGGCGGCG------CGATGAACGCGGCGGGGGCGGTGTCGATCGTGGTGCG
GGACCCGAGCCTGCCGCCGCCGAAGCCGAAGCTGGTGGCGCGGGGCGGGCGGCTGAAGATCGAGGAGGAGCAGGTGGGCG
TGGTGCCCAACGGCACCGAGTTCGTGATCGCCACCAGGGACTCCCCCGAGCTGGACGCGTCGGCGCTGGTGGTGGGCCGC
GTCGTCGCCGGCATGGACGTCGTCGGCAGGATCGCCGCCGTGGCCACCGTCAAGGACAACACCGGCTCGGCCTACTTCAA
GTCAGTGCTACGCTAG--TTCTCGCTCTTTCTTGCCGCAAGCAAAATTCACCGGCCTTCTTCTGTCCAAGAAGAAGACT-
--------GCATCTTTTTTA-----CGATCGAGAACGAACGTGATTTTGCAGGGTGGCGAAGCTGATCGGGGACAAGAGA
GCGGTGGTCGCAGAGCGAGGGTTCAACCGCCCCTACACCAAGATCCTAGTAACCAACTGTGGAGTCCTTGAG---CAGTA
GTAGTAGTAGTGGAATAAGAAAGATATATATACTTGAGATTCATGCATGGCTTTCTTTCCC-TTTTCATTCTTTCCTGTC
GTCCACATTGCAACCAGTCTTAGATCATCCAAAGGCGTCCAAGGACAGTGAATTTGTTGCAAAATGGAGTCGAGTTTTGT
TGTTTGAAAAGGAAAGGTTAAACCTCCGGGCTTCTAGATCCACTAATGCATGCAACTATATTATTATTCTCA--------
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------------------------------------------------------------------------------CT
AGAAGGGAGAAACAGCCGGAGGGGAGGAAGAAGCTCGCTGGCAAGCTACCCCATCATCTATCTTAGGGTGGGGGGTTGGG
GCGGCAGCACGACGGTGGTGCAAGTTCGCCGGAGAAAAAACCGGTCCCTGCCGAGGCTAGAGGAATGGCCAGGGGCGGCG
GCAGCATGATGGTGGGAGGAGGTTGAGGGGAGGGCGAGGAGGTGAGGCAACGCCGGAGCACCGCCGGCCGCCGGCGGTTC
GGCCGGTGGTTGTGGAAGAAGAAGAATCATGGGCTGGAGGTAGATGAACAGGAAAACTGTTCAGAGGTGGAAGAAAGCTA
CC---CGTTGCATCTACATCCGAAGGCCGAAAATGATTCAACTGATGATAATTTCAATTCCAATCGACTTACCCCTAGCC
TCTCCCTTTTTCTCAACATTATTGAAGTCAAGCGACCATGATAG-AAAAAAAGAATAGTTGTGAATAAAAGAGCATATCT
TTTTGTTTTTTTATTCGGTTTGCTTTAGTGTTTGTAGTCGTTGCTAGGTGGTCTACGGATGTAGGTGTAATTTTTTATTA
TTTCTGATGTTCGTGGTAATGTCATGATTGAATATGAATAGAACAAAAGTTTTCTCAAAATAAAAATCTATAACATTGAG
AATGTTCCAGTGACGCGAAAGAGCATATTTGATACTGGTCGCTTGACTTCAATAATAATGATCCACCAATGCTGCATCTC
TATGACGGGAAAGAACATATATTT--TTTTCTATGTGTGCGAAAGAACATATTT
>chr3D_1
ACATCCATCACCGGCGACGTTTTTT-GCTAGAAGCAGCCCTAAATTTTGCTAGAACCAGCTAGATCGTTTTGCTACATTG
AAACTGTTTTGGAGATTGTTGATGTG-------TTTTTTGCCAGAACCAGTGTTTTTTTGGTTGGAACTGGCTATTCTTT
TTTGCTTCAACTGGCCACCGGAGTTGTTTTTGCTTCGGTCGTTTTTTCATCGGAACACAAAAGTGCTAGTCGACGATGGC
GGCGACTGTGAGAAAACGACACGAGAGATGTTGCAACCATGGTGACCGCGCGCTGGAGCCAACAGGCGTCAGAGATGCAT
CGATGGTGACCGCGGTCTGGGATTCATTGGCAGCCATGCTGCAATCCCGGTGGCGGGGGCGGGGACCTCGCCGGTGCTCG
TCGGGCCCAA----------CGGGGCAAACACCACCTCTTGAGGGTTGGAAGTAGCGAGCCGGGAGACGGTGCCCTGCGC
ATGGTGGGCGTGTGGGTCTTTCCTTTTTTTTTCTACGAGCAGAGTGAGGAAGAAGACGACATGAGGAGAGA----GAGGA
TCAGATCTAATAGCCGCCACATGGCTAAATCGGACGACTGGAGGCCGACCGGCCGAAATTTGGGCTGGCGGTCCGGCGCC
TAACATTGCCCCTTAGACAAATACTATTG-CATGG---------------------------------------------
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----------------------------------------------------------------------------CTAA
GATAATGTTAAGTTCCCTTTTTCTATACATACACTA--------------------------------------------
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---------------------------------------GTGGAGTATCCATATGCCTGGTTTATTCAGCCTATGCAAAT
GCAGGCCATACACTTGAGATAGCAAATGGATTTGGGTCCTCATCCAGACGCGGCAAGGGCGCCGTCCACTCCATCCCGCA
GCAGCAGCAGCCATGTCGCATCGGATCCTCAACACCTCCAAGCCCACGCTGCCGCCGGCGCCGCCGCCTCAGCTGATCCA
CCACCCGCCCCAGCAACCGACAGCACCGAAGCTCGGCCGCCGTGCCGCCGCGGTCGCGGTCGCCATCGCCGCCTCACCGG
CGCTTCTCGGCGCCGTCTCCCCGTCCGCCCGGGCGCAGGAAGCGGCAGCAGCAGCGTCGG------CCTGCATCGACGAG
CTGCCGATCACGGCCAAGGCGTTCCTGGACGTGTCCATCGGCGGCGAGCCGGCGGGCCGCATCACGGTGGGCCTGTTCGG
CGACGCGGCCCCGGCCGGCGCGGCCCGGTTCCTGTCGCTCGCCACGGGCGTCGGGTACCGGCGCAAGGAGTTCGTGAAGG
TGGTGCCGGGGTACGTGCAGCACGCCGGCGTGGTCTCGTACCCGGTCATCCCCGCGGTGACCGACCGGCTGGCGGCCGAG
ATGGAGGCCGCGCGCGCCCGGTGCGGCGGCGGCGCGGGCGGCACGATGAACGCGGCGGGGGCGGTGTCGATCGTGGTGCG
GGACCCGAGCCTGCCGCCGCCGAAGCCGAAGCTGGTGGCGCGGGGCGGGCGGCTGAAGATCGAGGAGGAGCAGGTGGGCG
TGGTGCCCAACGGCACCGAGTTCGTGATCGCCACCAGGGACTCCCCCGAGCTGGACGCGTCGGCGTTGGTGGTGGGCCGC
GTCGTCGCCGGCATGGACGTCGTCGGCAGGATCGCCGCCGTGGCCACCGTCAAGGACAACACCGGCTCGGCCTACTTCAA
GTCCGTGC----CTAG--CTCTTGCTCTTTCTTGCTGCAAGCAAAATCACCAA----TCTTCTGTCCAAGAAGAT---T-
--------GCATGTTTTTTA-----CGATCGACAATGGATGTGATTTTGCAGGGTGGCCAAGCTGATCGGGGACAAGAGA
GCGGTGGTCGCAGAGCGAGGGTTCAACCGCCCTTACACCAAGATCCTAGTAACCAACTGTGGAATCCTTGAG---CA---
GTAGTAGTAGTGGAATAAGCAAGATATATATACTTGAGATTCATGCATGGCTTCCTTTCTCTTTTTCATTCTTTCCTGTC
GTCCACATTGCAACCAGTCTTAGATCATGCAAGGACATGCAAGAACAGTGGAATGTTGCAC--ATGGAGTTGAGTTTTGT
TTTTGATAAGG--AAGGTTAAACCTCCTGGCTTCTAGATCCACCAATGCACGCAACTATAATATTATTCTCACACAATAG
CCTAAGGCCTCCTTTGGTTCATAGGATAGAAATTTTATAGAAATAGGAAAATCATAGGAAGTGAAATGACATGCATCTCA
ATTCCGATGTCATTTGATGCATAGGATAGAATTTTTTTCATTGAGTCTAGGCTAATGTTTTTTTCCTCCAAAACGTGAAG
GATTGATTCCTATCCTACATAGGAATAGGAATCCATTCCTATAAACCAAAGGGCTTCAAAGGAATTTTTCCTTTGCAAAT
CCTATCCTATAGAATTCCTATAAAATTCCTACAAACCAAAGGAGGCCTAAGTTTTGAATTTGGTTCAGTCAATTTTCACT
AGAAGGGAGAAACAGCCGGAGGGGAGGAAGAAGCTCGCAGGCAGGCTACCCCATCATCTATCTTAGGGTGGGGGGTTGAG
GCGGCAGCACGGCGGTCGTGCAAGTTCGCCGGAGAAAAAACCGGTCCCCGCCAAGGCTAGAGGAATGGCTAGG-GCGGCG
GCAGCATGATGGTGGGAGGAGGTTGAGGGGAGGGTGAGGAGGCGAGGCAACGCGGGAGTGCCGCCGGCCGCGGA------
---CGGTGGTTGTGGAAGAAGAAGAATCATGGGCTGGAGGTAGATGAACAGGAACACTGTTCAGAGGTGGAAGAAAGCTA
TACCGCGTTGCATCTGCATCCGAAGGCCAAAAATGATTCAACTGATGATAATTTCAATTCCAATCGACTTACCCCTAGCC
TCTCCCTTATTCTCAATATTATTGAAGTCAAGCGACCATGATAGAAAAAAAAGAATAGTTGTGAATAAAAGAGCATATCT
TTTT------TTATTCGGCTCGTTTTAGTGTTTGTAGTCGTCGCTAGGTGGTCTACGAATGTAGGTGTAAT-TTTTATTA
TTTCTGATGTTCGTGGTACTGTCATGATTGAAGAGGAATAGAACGGAAGTTTTCTTAAAAAAAAGATCTATAACATTGAG
AATATTTCTGTGACCCGAAAGAGAATATTTGATACTGGTCACTTGACTTCAATAATAATGATCCACCAATGCTGCATCTC
TGTGACGGGAAAGAACATATTTTTGTTTTTCTATGTGTGGGAAAGAGCATATTT
>chr3B_1
ACATCCATCGCCGGTGACGTTTTTTTGCTAGAAGCAGCCCTAAATTTTGCTAGAACCAGCTAGATCGTTTTGCTATATTG
AAACTATATTGGAGATTGTTGTTGTGT----TTTTTTTTGCCAGGACCAGTATTTTTTTGGTTGGGACTGGCTATTCTTT
TTTGCTTCAACTGGCCACCGGAGTTGTTTTTGCTTCGGTCATTTTTTCATCGGAACACAAAAGTGCTAGTCGACCATGGT
GGCGACTATGAGACAACGACACGAGAGATGTTGCAACCATGGTGACCGTGCGCTGGAGCCAACAGGCGTCAGAGATGCAT
CCATGGTGACCGCAGTATGGGATTCATTGGAAACCATGCTGCAGCCT-GGTGGCAGGGGCGGGGACTTCGGCGGTGCTCG
TCGGGCCCGTCTACAAACAGCGGGGCAAAGGCCACCTCTTGAGGGTTGGAAGCGGCGAGCCGTGAGACGGCGCCATGCGC
GTGGTGGGCGTGTGGGTCTTTCC-TTTTTTTTCTACGAGCAAAGTAAGGAAGAAGACGACATGGGAAGAGA----GATGA
TCAGATCTAATAGCCGCCACATGGCTAAATCGAACGACTGGAGGCTGACCAGCTGAAATTTGGGCTGGCGGGCCGGCGCC
TAACACTACCCCTTAGAAAAATACTATTG-CATGGCTAAGAGCATCTCCAACAGGCGTGGAACCGCGCCCGCGCGGTAAA
GTTTAGTTTTAGCGCGCGCCAGCTGGTTCTGCGCGCTCCAGCGGTGGCGGGAACTTACCGCGAGCGGGAAGTGTTT--GC
GCGCGAGGGAGAAAGCAGCACGCGGCGCGGTAGATTTGGCGTGCCGCTTCGCGCGCGCCTATAAAATCGCGCGCTCGCCA
CGCGCACAGAACACAGCCACGCGCCCTCCCCTCGCCACCTTGCCGCTTTGCCGCTTTCCGCGCCACCACCACGCCACCAT
GCCGTCACGCCGCCGGGGTTCGTCGGGCTACCGCGGCGTCCGCGAGCGCCCCAACGGCTGGTACTCCGCCGAGATCAGGG
CCGGCGACGTCCGGCTCGACCTCGGGTCGTTCCGGAGTGCGTACGACGCGGCGGCGTGGCGCTTGGAGAGTTCCCGGTCG
CAGATGAACTTCCCGGACGTCTTCACACGCGAGCAGGCGCAGTGCGTCGTCCCTCCGCCGCGTCTCATCATCGACATGGA
CCATGCCGACCACGCTCGGCGGCAGCGCCGCCTCCTCATCGCCGAGGAGGATGAGCGAGCCATGGCGGAATGGCGCAGTC
GCCACCCGGAGGATGTCACCGACGAGCGTGCCTACTGGGTGGAGAGGACGGCAAGGCGCCGCGCGGAGCGGGCTGACCGG
CGTCAGCGGAAGGCATTGGCAAATGAGCAGTGCGATATCGTTCAAGCAGGTGGGAGGTCGTTCTTCACGGCCAACGATGA
ACGTTGGGACGACATATGGCTCTCAACCTCGGACGACATCGACGATGTTGATGATGGTAGCAACTTGGAATAGTTTCTAT
CTATGCTTTCGAACTATCTATCTAGTTGCATCGATGTAAAATACCTTTGTATCGTTTTTTTATCTATGCAATATAATTTA
AAAAATATTGTAGAATGAGCGCGCGTGCTGCATTTTTACCACGCCTGCTGAAGCT-------------------------
-----------AGCGCTGCGCGGCGCCCCAAAGCAGTTTTTAGCGCGCGGCGCGTTCGGCGTCTGTTGGAGATGCTCTAA
GATAATGTTAAGTTCCCTTTTTCTATACATACACTA--------------------------------------------
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---------------------------------------GTGGAGTATCCATATGCCTGGTTTATTCAGCCTATGCAAAT
GCAGACCATACAATTGTGATAGGAAATGGATTTGGGTCCTCATCCAGACGCGGCAAGGGCG---TCCACACCATCCCGCA
GCAGCAGCAGCAATGTCGCATCGGATCCTCAACACCTCCAAGCCCACGCTGCCGCCGGCGCCGCAGCCTCAGCT---CCA
CCATCCTCCCCCGCCACCGCCCA---CGAAGCTCGGCCGCCGTGCCGCCGCGGTCGCGGTCGCCATCGCGGCCTCGCCGG
CACTCCTCGGCGCCGTCTCCCCGTCCGCCCGGGCGCAGGAAGCGGCAGCAGCAGCGTCGG------CCTGCATCGACGAA
CTGCCGATCACGGCCAAGGCGTTCCTGGACGTGTCCATCGGCGGCGAGCCGGCCGGCCGCATCACGGTGGGCCTGTTCGG
CGACGCGGCGCCGGCCGGCGCGGCCCGGTTCCTGTCGCTCGCCACGGGCGTCGGGTACCGGCGCAAGGAGTTCGTGAAGG
TGGTGCCCGGGTACGTGCAGCACGCCGGCGTGGTCTCGTACCCGGTCATCCCGGCGGTGACCGACCGGCTGGCCGCCGAG
ATGGAGGCCGCGCGCGCGCGGTGCGGCGGCGGCG---------CGATGAACGCGGCGGGGGCGGTGTCGATCGTGGTGCG
GGACCCGAGCCTGCCGCCGCCGAAGCCGAAGCTGGTGGCGCGGGGCGGGCGGCTGAAGATCGAGGAGGAGCAGGTGGGCG
TGGTGCCCAACGGCACCGAGTTCGTGATCGCCACCAGGGACTCCCCCGAGCTGGACGCGTCGGCGCTGGTGGTGGGCCGC
GTCGTCGCCGGCATGGACGTCGTCGGCAGGATCGCCGCCGTGGCCACCGTCAAGGAGAACACCGGGTCGGCCTACTTCAA
GTAAGTGCTAGGCTAGAGCTCTCGCTCTTTCTTGCCGCAAG-AAAATTCACCGACCTTCTTCTGTCCAAGAAGAAGACNN
NNNNNNNNGCATCTTTTTTACGATCCGATCGAGAATGAATGTGATTTTGCAGGGTGGCGAAGCTGATCGGGGACAAGAGA
GCGGTGGTCGCAGAGCGAGGGTTCAACCGCCCCTACACCAAGATCCTAGTCACCAACTGTGGAGTCCTTGAGCAGCA---
GTAGTAGTAGTGGAATAAGCAAGATATATATACTTGAGGTTCATGCATGGCCTCCTTTCTC-TTTTCATTCTTTCCTGTC
GTCCACATTGCAACCAGTCTTAGATCATGCAAAGGCGTCCAAGGACAGTGGATTTGTTG---------------------
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>chr3B_1
ACATCCATCACCGATGACGTTTTTTTGCTAGAAGCAGCCCTAAATTTTGCTAGAACCAGCTAGATCGTTTTGCTATATTG
AAACTATTTTGGAGATTGTTGTTGTGT----TTTTTTT-GCCAGGACCAGTATTTTTTTGGTTGGGACTGGCTATTCTT-
TTTGCTTCAACTGGCCACCGGAGTTGTTTTTGCTTCGGTCGTTTTTTCATCGGAACACAAAAGTGCTAGTCGACCATGGT
GGCGACTATGAGACAACGACACGAGAGATGTTGCAACCATGGTGACCGCGCGCTGGAGCCAACAGGCGTCAGAGATGCAT
CCATGGTGACCGCAGTATGGGATTCATTGGCAACCATGCTGCAGCCT-GGTGGCGGGGGCGGGGACTTCGCCGGTGCTCG
TCGGGCCCGTCTACAAACAGCGGGGCAAACGCCACCTCTTGAGGGTTGGAAGCGGCGAGCCGTGAGACGGCGCCATGCGC
GTGGTGGGCGTGTGGGTCTTTCC-TTTTTTTTCTACGAGCAAAGTAAGGAAGAAGACGACATGGGGAGAGA----GATGA
TCAGATCTAATAGCCGCCACATGGCTAAATCGGACGACTGGAGGCCGACCAGCTGAAATTTGGGCTGGCGGGCCGGCGCC
TAACACTACCCCTTAGAAAAATACTATTG-CATGGCTAAGAGCATCTCCAACAGGCGTGGAACCGCGCCTGCGCGGTAAA
GTTTAGTTTTAGCGCGCGCCAGCTGGTTCTGCGCGCTCCAGCGGTGGCGGGAACTTACCGCGAGCGGGAAGTGTTTGCGC
GCGCGAGGGAGAAAGCAGCATGCGGCGCGGTAGATTTGGCGTGCCGCTTCGCGGGCGCCTATAAAATCGCGCGCTCGCCA
CGCGCACAGAACACAGCCACGCGCCCTCCCCTCGCCACCTCGCCGCTTTGCCGCTTTCCACGCCACCACCACGCCACCAT
GCCGTCGCGCCGCCGGGGTTCGTCGGGCTACCGCCGCGTCCGCGAGCGCCCCAATGGCTGGTACTCCGCCGAGATCAGGG
CCGGCGACGTCCGGCTCGACCTCGGGTCGTTCCGGAGTGCGTACGACGCGGCGGCGTGGCGCTTGGAGAGTTCCCGGTCG
CAGATGAACTTCCCGGACGTCTTCACGCGCGAGCAGGCGCAGTGCGTCGCCCCTCCGCCGCGTCTCATCACCGACATGGA
CCGTGCCGACCACGCTCGGCGGCAGCGCCGCCTCCTCATCGCCGAGGAGGATGAGCGAGCCATGGCGGAATGGCGCAGTC
GCCACCCGGAGGATGTCACCGACGAGCGTGCCTACTGGGTGGAGAGGACGGCAAGGCGCCGCGCGGAGCGGGCTGACCGG
CGTCAGCGAAAGGCATTGGCAAATGAGCAGTGCGATATTGTTCAAGCAGGTGGGAGGCCGTTCTTCACGGCCAACGATGA
ATGTTGG-ACGACATATGGCTCTCAACCTCGGACGACATCGACGATGTTGATGATGGTAGCAACTTGGAGTAGTTTCTAT
CTATGCTTTCGAACTATCTATCTAGTTGCATCGATGTAAAATACCTTTGTATCGTTTTTTTATCTATGCAATATAATTTA
AAAAATATTGTAGAATGAGCGCGCGTGCCGCATTTTTACTGCGCCTGTTGGAGCTGCGCGCACGCTGCTTTTTACCGCGG
CTGCTGGAGCCAGCGCTGCGCGCCGCGCCAAAGCAGTTTTTAGCGCGCGGCGCGTTCGGCGCCTGTTGGAGATGCTATAA
GATAATGTTAAGTTCCCTTTTTCTATACATACACTA--------------------------------------------
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---------------------------------------GTGGAGTATCCATATGCCTGGTTTATTCAGCCTATGCAAAT
GCAGACCATACAATTGTGATAGGAAATGGATTTGGGTCCTCATCCAGACGCGGCAAGGGCG---TCCACACCATCCCGCA
GCAGCAGCAGCAATGTCGCATCGGATCCTCAACACCTCCAAGCCCACGCTGCCGCCGGCGCCGCAGCCTCAGCT---CCA
CCATCCTCCCCCGCCACCGCCCA---CGAAGCTCGGCCGCCGTGCCGCCGCGGTCGCGGTCGCCATCGCGGCCTCGCCGG
CACTCCTCGGCGCCGTCTCCCCGTCCGCCCGGGCGCAGGAAGCGGCAGCAGCAGCGTCGG------CCTGCATCGACGAA
CTGCCGATCACGGCCAAGGCGTTCCTGGACGTGTCCATCGGCGGCGAGCCGGCCGGCCGCATCACGGTGGGCCTGTTCGG
CGACGCGGCGCCGGCCGGCGCGGCCCGGTTCCTGTCGCTCGCCACGGGCGTCGGGTACCGGCGCAAGGAGTTCGTGAAGG
TGGTGCCCGGGTACGTGCAGCACGCCGGCGTGGTCTCGTACCCGGTCATCCCGGCGGTGACCGACCGGCTGGCCGCCGAG
ATGGAGGCCGCGCGCGCGCGGTGCGGCGGCGGCG---------CGATGAACGCGGCGGGGGCGGTGTCGATCGTGGTGCG
GGACCCGAGCCTGCCGCCGCCGAAGCCGAAGCTGGTGGCGCGGGGCGGGCGGCTGAAGATCGAGGAGGAGCAGGTGGGCG
TGGTGCCCAACGGCACCGAGTTCGTGATCGCCACCAGGGACTCCCCCGAGCTGGACGCGTCGGCGCTGGTGGTGGGCCGC
GTCGTCGCCGGCATGGACGTCGTCGGCAGGATCGCCGCCGTGGCCACCGTCAAGGAGAACACCGGGTCGGCCTACTTCAA
GTAAGTGCTAGGCTAGAGCTCTCGCTCTTTCTTGCCGCAAG-AAAATTCACCGACCTTCTTCTGTCCAAGAAGAAGAC--
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>SNPs
--------S-S---------------------------------------------------------------------
---------------------------SSSS----------SS---------------------------S---------
---S---------------S-----------S-----S---------S---S------S--S------------------
----------S-----S---------------------------------------------------S-----------
----------------S---------S-S-----------S------------S----S-----------S----S----
S-----SS---S------S-------------------------------------S-----------------------
--------------------------------------S-S-------S---------------S-----SSSSS-----
----------S---SS---S------------S---SS--S-------S-----S---------SS-S--S---------
--S--------S------S----S----SS--------------------------------------------------
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------S-S--------S----S---S----S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SSS----------------------------
-------------------------------------------S------------------------------------
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-------------------------------------------------------SS--SSSSSSS--------------
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----------S--------------------------S------------------------------------------
-------------------------SS-------SS--------------------------------------------
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----------S-------S----------------------------------S--------------------------
-----------------------------------S---S----------------------------------------
-----------------------------------------------------------------------------SSS
-------------------S---------------------------------S-----S--------------------
----------------------------S---------------------S--------SSSS-------S---------
-S--SSS--S-SS--------------S---------------S------S---------S-------------------
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--------------------------------------S----S----------------------------------S-
-----------S----S-------------------------------S---S----------------S---S------
----------------------------------S-------S----------S----SS-----------S-SSSSSSS
SSS---------------------------------------------------S-------------------------
SS-------------S------------S---------------------------------------------------
--------S-------S---------------------------------------------------------------
----SSSSSS--------S-S-S------------------S---------------S-------------S--------
------------------S-------------S-S---------SS---------S----S---S---------------
---S--S-S-----S--------S----------------S---------------------------------------
-S------------------S------------------S------S-------
>forward_597
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-----------------CAGATGGCTAAATCGCACGC-------------------------------------------
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>reverse_4001
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CCCGTTGCATCTACATCCGA------------------------------------------------------------
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