>input_sequence_63329
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-----CCCG---------GGCGCCAACCCACCCGATCGA-------CCGAGAGATCACGCGGCAACCAGCCAACC-CCGG
AGACCCACGGAAACAACTCGTCT----------------------GCAATGTGCAGAGGAACGGTGGACGACCTCCGCCC
GCTCGGAGCCCGGCGGCGGCTCGAGGTACGGGCGTTCTACCTCCGCCTCTCCTCG------------TCAT------CCA
CGTCCACGTCGGCGCCGCCCGCGGAGCTCACGCTCGTGTACCGCCCGGCCATCGGCGGCGCGGCGCTGGAGCTGGGCGGC
CGCGCGCTCCCGCCGGCCTGCCCCGCCGAGGTCACCCTCCTGCGCGTGCGCGGC------------AACG---------A
CGACGC------GCCGGCGTACGGGAGCGCGGACCGCGTCTCTGCCGCCGAGGGCGCGCGGTTCGAGGTGTACGCCG---
GGAAGGAGGGGCTCGCGGCGGAGGGCGCCTTC---GCGCGGCGCAAC---------GGCGGGTGGCGCGTCGAGTGCCGC
CGCCCGGTCGC------GTCGCACG------CGCGCGTCGTGGAGGTGCTGGTCCTTGCGGAGGGCGGCGTGGTCGTAAG
AGCCAGGGCCAGGGCGTCGGCGGCGAGGAGGATGGGATGCGCCACGCGGCTCGAGGGGATACCGGAGGAAGAGGACGC--
-------------------GCCGTGCGAGTGC---GGGGCGTGCGGAGACGAGTGGGAGATGGTCGGCCACGTC------
------GGCGACGAGTTCAAGGAGCACGAGGAGGAGGTTGAGGCGGAAACGATGCGGTGGGCGCTGGAGATGGGTGCCTG
GGCGGTGTGCGTCGGGGTCGGGCTGCTCGCCACCGCCCGCCGGTTCAGCCGGAGGCGACCCGCGCTCCGGTGATCCCGCC
AAGAGTCAAGTGTACGTGTTCGCCAGGATTTTGTAGTACGTAGCCTCCTGTTTCT-------TTCTCAAGATTGTAGCGT
ATACATAGTTTTAAATAGCCGGCCGCTATAGCCCCGCTATAACTGTTTTTAAGGAATGCCGCTATATACATACTATTTAG
ACGCTATAGCCCGCTATTTAAAACATTAAATGTATATACGTACT------------------------------------
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>chr5D_1_TraesCS5D01G532200
GATGCTACTGAGGCGGTTCCCCTTTTTAGGCGTCGTGCGTGTGCTTGTAAATCATTGTAAGCAGAACGACTGGAATGTGG
GAGAGATTGAATTCATCGAACATATATCATTGCCCTATTATATGGCTTGTAAGGGGAACGATCGGGGAGCTGCACCGGTC
AACCGGGATTCCACATATAAGAATCGCCATGAGAACTCTAGGGATTGCCTAGACGGCCACACGTACGTCCATGGGGTGGA
GTGGAGCAAGTCAAGTGAGAAACCAATGGCAAATTTTCTCACGAGGAAAATGCTTATCGGTTCATGCTCCGATCACCCAT
CAGTGCCCTCGAAAGAGGGAAAGAGATGACTTCAAAAACCGGATGTGGACTATCTGCTCCCAAGCTCAAATGCTCTTGGA
TGAACATTAAAACCAAGAAAAATAGTTTA------AAAAATGAAAAAATTGTGGCAAACTTTGAAAAATGGTTGGTGTAC
TTGCAAAAATTTATCAGGAAATGAGATTCGTGA--------AAAAAATAGATGCCCCATGTTTGTCAAAAAAAAATTGAT
GCTGGTTTTTTTCTTGCCGCCACTTCTACGAGTGTTGTTTCATGATGAATATTCCCAAACACTTAAAACATTTGTTCGAA
GTTTGTGAAAAAAGATCTA-------------------------------------------------------------
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-----------------------------------------------------------TTTTTTCCTGGCTTGTACTGT
TCATCACAAACTGAAATACTGAAATGAGCTTTGGGAGCAGAGGAGCAGTTTCGCCGCA----------------------
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-----------------------------------------GGTGGCACGCATGCCATGCCGCCATGGCCACCCAAACCC
GAACCGCGTGCTCACTCCACGCCAAAG-----CCACCCCAATTTCCCAGCACGGAGCAAGAGGACAAACCGAAAATATCA
GGCGCGCGGCGCGGTCGTCGGCACCAACCAAAGCCAAACCGTGTGCTACG--CTCAGTCCCGAGTCGTGTCGGGTCGTGT
CCGCGCCCCCCGTTTCCACCAAAAACCACGAGCCCGAAACCACCGATCTCACCCC-CATCTCCCGCCGCGCTTTACTATT
ACATCCCCG---------GGCGCCAACCCACCCGATCGA-------CCGAGAGATCACGCGGCAACCAGCCAACC-CCGG
AGACCCACGGAAACAACTCGTCT----------------------GCAATGTGCAGAGGAACGGTGGACGACCTCCGCCC
GCTCGGAGCCCGGCGGCGGCTCGAGGTACGGGCGTTCTACCTCCGCCTCTCCTCG------------TCAT------CCA
CGTCCACGTCGGCGCCGCCCGCGGAGCTCACGCTCGTGTACCGCCCGGCCATCGGCGGCGCGGCGCTGGAGCTGGGCGGC
CGCGCGCTCCCGCCGGCCTGCCCCGCCGAGGTCACCCTCCTGCGCGTGCGCGGC------------AACG---------A
CGACGC------GCCGGCGTACGGGAGCGCGGACCGCGTCTCTGCCGCCGAGGGCGCGCGGTTCGAGGTGTACGCCG---
GGAAGGAGGGGCTCGCGGCGGAGGGCGCCTTC---GCGCGGCGCAAC---------GGCGGGTGGCGCGTCGAGTGCCGC
CGCCCGGTCGC------GTCGCACG------CGCGCGTCGTGGAGGTGCTGGTCCTTGCGGAGGGCGGCGTGGTCGTAAG
AGCCAGGGCCAGGGCGTCGGCGGCGAGGAGGATGGGATGCGCCACGCGGCTCGAGGGGATACCGGAGGAAGAGGACGC--
-------------------GCCGTGCGAGTGC---GGGGCGTGCGGAGACGAGTGGGAGATGGTCGGCCACGTC------
------GGCGACGAGTTCAAGGAGCACGAGGAGGAGGTTGAGGCGGAAACGATGCGGTGGGCGCTGGAGATGGGTGCCTG
GGCGGTGTGCGTCGGGGTCGGGCTGCTCGCCACCGCCCGCCGGTTCAGCCGGAGGCGACCCGCGCTCCGGTGATCCCGCC
AAGAGTCAAGTGTACGTGTTCGCCAGGATTTTGTAGTACGTAGCCTCCTGTTTCT-------TTCTCAAGATTGTAGCGT
ATACATAGTTTTAAATAGCCGGCCGCTATAGCCCCGCTATAACTGTTTTTAAGGAATGCCGCTATATACATACTATTTAG
ACGCTATAGCCCGCTATTTAAAACATTAAATGTATATACGTACTGTATAGACGCAAATCGATCAACAACCAAGACATCAG
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---------------------------------ATGCCATCTTACAAATTGTTCATGAGTTAGTTCATC-----------
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---------CATCCATCCAACTGTGCAAAGCTTGCTGGGTCCTTATCAACAAGGTAGCAGACATGAGCAT----------
-------------------------------------------------------------------TAGAAAGCAAGTC
ATCAGAAGCC----------------------------------------------------------------------
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-------------------------------------TTGACCTTTTGTTTTTGTTTTTGTTTTTGAATAAGATCGGAAG
CCTTGACCTAGCTACGCACATATCTG------------------------------AAAGGAGGGGGGATCTTTATCTGT
TCCCACCATTCTTACTTGACTGCTATCTGTCTGAAACTCTAAAACTCTAAATCCTACGGGTCAATGCCACAGCTTCAGCA
ACAAGAAAAGAAACAGGGGGAGTTCCTTGCAACTACCACTACATGCTGAATTGAAAATAACTCTCCTTGGTGGGCACAGT
TCAACTATAACATCCAG-----AAGAGCACACAACATATGGAACATTTGTTTGTTAGTGAATCTACTACACCAATACTCA
AACCTTCTGCGTCCGTCCGGATCACGCAGTCCGGACGTCTTTTGTCTTCGGATCACGCAGTCCGGACGTCTTTTGTCTCT
GGATCACGCAGTCCGGAAGTGTTTTGCCTTCAAACGCGGTCCTGCATCTTTCGGTACGGTAGCCCGGACGCACTTTTTCT
CGCAAACCGAAGACAAACTATGGGGTTTGCGGGCGTCTGGACCGCTACCACGCCCGTGTTTGACTAATTTGGCCCACCGA
ACACCCATCTCCTATGCCCACACGCTTTTCTCGCCCATGTCCGCATTCATGCGCAGAGCGGACACGACCGTTCACTGGAG
CCGGCATTAAAGCGGCTCGCCGGCCGAGCTCTCGGCCGCCCGCTGCAAACGCGTTCTCTCCGTATTGAAACGGATTCCGT
CTGCCCGCCTACCTCTATTAAACCAGTGCGAGTGCCGAGGAATCTACTCCGACGCCCGGAGTGTCACACGTTTATTCCTG
CGCTGACTGGCATCAAACACCTCTTCGACTGGGTCC
>chr4A_156
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---------------------------------------------------------------------------CGGTC
AACTAGGGTTTCACATATCAGAATCGTTGTGAAAACTCTGGGGGTTAGCTACACGGGCACATGTACAGCGAGGGGGTGGA
GTGGAGCAAGTCAAGTGAGAAATGATGGTGAATTTTCTTCACGAGGAAAATGCTTATCGGTCCGTGGTTCGATCACCCAT
CAGTGACCTCGAGAGAGGGAAAGAGATGCCTTCAAGCACCGGATGTAGACCATCCGGTCCAAAGCTCAAATGCTTTTGGA
TGAACAGTGAAATCAAGAAAAATAGTAAAACAAATAAAAATAGAAAAAATGTGGCAAACTTTCACAACTGGTTTGTGTGC
TTGCAAAAATTTATCACGAAATGATATTTGTGAAAATCATGAAAAAATCGATGCTACATGTTTGTCAAAAAAA--TTGAT
GTTGATTTTTTTTTTGCCACCACTTGTACGCATGTTGTTTCATGATGAAAATTCGCAAACACTCAAAACATTTGTTGGAT
GTTTGGCTTGTACTGTTCATCCCAAATTGAAATGAGCTCGGGGAGCAGAGGAGCACTTTCTGGTGACGTAATGATTGGAC
TGATGCCCTCATCAACTTTGCCAGCTGCGAGGCAAGCCTCGCAAGCAGAGGCTCCCTTCGTCGCTACATATAGGTGGTTC
CACGGGCGTCCGCAGGTGGCACGCATGCCATCGTCACCCAAACCATGTGCTCACTCCAGGCCAAACGAAAATATCAAAGG
CGGACGGATCTATAGATATTGAGTGGTACTGTCACCTCTCGCTCCCGTGCGGCTCCACGGGCCGCACGGGGGTGCCCAAA
CTCCGGCCGCCTAGGGCCCTCCTTCTCCCTCTCTCCCCTCACCGCCGCCAAAGGGCGTCGTCGGGCAAAGCCCGGGCAGC
GTCGGCGACGGTGGGGCCGTTTGGCGACGAGGTTCGAGCGGATCTCGAGGTCCCGGCTGTGTGTGCGGCGGCGGGGTCAG
CGGAGCAGTGGGGTGGCGGCCGTGGCTCATGGAGGTGCAGAGGGCCGCATGGCTGTGGCGACGAGGGGTGGCTGGGCGCG
CTGGTGCGTGTAGGCATGGATATGGCCGGGGTGAGCGCGACAGCCTTCTATTGCGCGGATCCTGGGTGAGCGCGGCGGCC
GTCGTCATTGAAGACATGACCTTGAACGTGTTGGGAGTCGGCAAGTTGAAGGTCACTATGTACCTGATCTTGATCTGGTG
GACGACGATGAAGGTGGCCCAACCCTGATCGAGGGTGACCCTGCCGTTAATCAGCCGGATAGTGACCCTCCATGAGCAAC
CGGTGTTTGTCTTGACCTTGAACTCCGTCGGCACAGCCAGGAAGTACTTCGTAAAGTCTAGGATCATTGGTATGGCCTCA
AGCTTCGGGGTCATAATCACATTGCATTAGTGGGTTGGGCCACCCTTCTCATGGTAGTGGCCATTGTTCCGACACTTGCC
GCTGGGGGGCTCCTCCGGCAACATGTCGCCGTCTGTGGGCGGCACCTGGACGGGCGTCTGCGGCACCACCTCCAAGGGTG
GCACCACATACTTGCCCTTGTCATGCTCCATTGGCGGCACCACCTCCTTGCTCTTGTTTTCCATGTCGATCCGCATTATG
AAAAGCACAAAATCATGAAAAAGATCGGTGATCCATGTTTTTTTAAGTCGATGCTGATATTTTTTTGCCACCACTTCTGC
GTATGTTGTTTCATTATGAAAATTCCCAAACAATCGTCGATGATCCATTTGTTCGAGATTTTTTTCCTGGCTTGTACTGT
TCATCCCAAACTGAAAT--------GAGCTCACGGAGCAAAGGAGCAGTTTCGTCAGCAAACCAGACTCTACTCTACTCT
ACTCTGGCGACGTAATGACTGGACTGATGCCCCCATCAACTATTCAACTTTTCCAGCTGCCAAGCAACCAGAGCAAAGGC
TCCCCTCGTCGCGACGTACTTGGTTCCACGGCCGTCCATATGGTGGCACGTATGCCATGCCCATCCAA--ACCCGAACCC
AAACCGTGTGCTCACTCGAGGCCAAACCCTACCCACCCCGATTTCCCAGCCCGGAGCAAGAGGACAAAACCAAAATATCA
GGCGCGCGGCGCGGTCGTCGGCACCAACCAA------ACCGTGTGCTATATACTCAGTCCCGAGTCGGGTCGGGCCGGGT
CCGCACCCCCCGTTTCCACCAAATACCACGAGCCCTCGCCCACCGATCTCACCCC-CATCTCCCGCCGCGCTTTACTATT
ACATCCCCG---------G-------------------------------------------------------------
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>chr5B_734
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--------------------------------------------------CATGCCATGCCCATCCAA--ACCCAAACCC
AAACCGTGTGCTCACTCGAGGCAAA-----ACCCACCCCAATTTCTCAGCCCGGAGC--GAGGACAAAGCGAAAATATTG
GGGA-----CGCCGTCGTCCGCACCAACC------AAACCGTGTGCTACG--CTCAGTCCCGAGTCGTGTCGTGTCGGGT
CCGCGCCCCCCGTTTCCACCAAAATCCACGAGCCCTAGTCCACCGATCCTACCTG-CATCTCCCGCCGCGCTTTACTAC-
-----------------------------------ACCGGATCGACTCGAGAGATCACGCAGCTAGTATCAGCCAACCG-
AGACCCACGAAAACAAATCGTACGTACCCACACGCGTGCTTGGCGGCAATGTGCAGAGGGGCGGTGGACGACGTCGGCCC
------------GCGGCGGCTCGAGGTGCGGGCGTTCTACCTCCGCCTGTCCTCG------------TCATCCACGCC--
----CACGTCGGCGCCGCCAGCGGAGCTCACGCTCGTATACCGCCCGGCCATGGGCGGCGCAGCGCTGGAGCTGGGCGGC
CGCGCGCTCCCGCCGGCGTGCCCCGCCGAGGTCACCCTCCTGCGCATGCGCGGC------------AACG---------A
CGATGTGCATGTGCCGGCGTACGCGAGCGCGGACCGCGTCTCGGCTCCCGAGGGCGCGCGGTTCGAGGTGTACGCCGCCG
GGAAGAAGGAGCTCGCGGCGGAGGGCGCCTTC---GCGCGGCGCAAT---------GGCGGGTGGCTCGTCGAGTGCCGC
CGCCCGGTCGC------GTCGCGCT------CGCGGGTGGCGGAGGTGCTGGTCGTCGCGGAGGGCGGCGTGGTCGTAAG
AGCCAGGGCAAGGACGTTGGCGGCGAGGACGATTGGGTGCGCCACGCGGCTCGAGGGGATACCGGAGGAGGAGGC-----
-------G---------GGCCCGTGCGACTGC---GGGGCATGCGGAGACGAGTGGGAGATGGTCGGCCACAGC------
------GACGACGAGTTCAAGGAGCACGAGGAGGAGGTGGAGGCGGAAGCGATGCGGTGGGCGCTGGAGATGGGCGCCTG
GGCCGTGTGCGTCGGGGTCGGGCTGCTCGCCACCGCCCGCCGGTTCAGCCCGAGGCGGCCCGCGCTACGGTGATACC---
------------------TTCGCCAGGATTTTGCA----GTAGCTTCTTGTTTCT-------TTCTCAAGACTGTAGTAT
GTA-----------------------------------------------------------------------------
---------------------------------------------TATACATGCGAATCTATCAACAACCAAGACATCAA
ATGCCATCAAATGCGAATCTATCAACAACCGAGGCTGCCCCAATTTTATAGATTGAAGCAGAAAACAGCAGTCACAACCA
GATCAAAGTACGACTAAAGCAACACACCAGGAGGCTACGCTACCTAGCGCTTGAGAGCAGAAGTTCTCTCCACCGAAACA
TGAAAAAAATACTAAGTAGTTTTTATTACATAACCAGAACCGAAGGGAGAAGGAAACACAGCAGAACCTTCGACTCGCGT
GGCTCTCATGTCCTCCTCTCACAGCTCACTTCCAGGCTATCCGCATCAGCTCTCCACGCCATTTGTCCAGCAGGAGGATG
CACCTTTGCAGCAGAATTGCTTGAGATCATGAAATGCCATCTTACACATTGTTAATGAGTTAGTTCCTCCGTCCGTCCAA
TTGAGTTCTCTGCCCCGCAAAAAAAGAAAAAAAATGAGTTCTCTGCGTCAGTCGACATACTTACGATTCTACCGAGCAAT
TACTGAGTTCATCCATCCAACTGGGCAAAGCTTGCTGGGTCCTTATCCACATGGTAGCAAATAGGGACAGGCGCATTAAG
TACTCTCTCCGTCCCAAAATTCTTGTCTTAGATTTGCTTAGATACGGATGTAGTGGGAATGAGGGAGTAGAAAACAAGTC
ATCAGAAGCC----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TTGACCTTTTGTTTTTG------TTTATGAATAACATCGGAAG
CCTCGACCTAGCATATT-------------------------CTGAAACCAGCCACAGGGCAGGGAGGATCTTTATCTGT
TTACACCATTCTGACTTGACTACGATCTCTCTGAAACTA--------TAAATCCTCCGGGTCAATGACACAGCTTCGGCA
ACAAGAA-----ACAGGGGGAGTTCCTTGCAACTACCACTACACGCTGAATTG-AAAAATCTCTCCTTGATGGGCACACT
TCAACTATAACATCCAG-----AATAGCACACAACGTTTGGAACAGTGTTTTGTTAGGGCATCTCCAACGCCGACGTTCA
AACCGTGTGTATTCGTCTGGACCACGTGGTCCGAACATGTTTTGTC----------------------------------
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>chr4A_915
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------------------------------------------------------------------------------GT
CCGCACCCCCCGTTTCCACCAAAAACCACGAGCCCTCGCCCACCGATCACACCCCACATCTCCCGCCGCGCTTTACTACC
ACTTCATCCCTTCCCAGCGGCGCCAACCCACCCGAACCCGATCCACCCGAGAGATCACGCAGCAACCAGCCAACC-CCG-
AGACCCACGGAAACAAATCATACGTACCTACGTGCGCGCTTGGCGGCAATGTGCAGAGGCACGGTGGACGGCCTCCGCCC
GCTCGGAGCCCGGCGGCGGCTCGAGGTGCGGGCGTTCTACCTCCGCCTCTCCTCG------------TCAT------C--
----TACATCGGCGCCGCCCGCGGAGCTCACGCTCGTGTACCGCCCGGCCATCGGCGGCGCGGCGCTGGAGCTGGCCGGC
CGCGCGCTCCCGCCGGCGTGCCCCGCCGAGGTCACCCTCCTGCGCGTGCGCGGC------------AACGATGGCAAGGA
CGACGC------GCCGGCGTACGCGAACGCGGACCGCGTCTCGGCCACCGAGGGCGCGCGGTTCGAGGTGTACGCCGCCG
GGAAGGAGGAGCTCGCCGCGGAGGGCGCCTTC---GCGTGGCGCAAC---------GGCGGGTGGCGCGTCGAGTGCCGC
CGCCCGGTCGC------CTCGCGCT------CGCCCGTGGCGGAGGTGCTGGTCCTCGCGGTGGGCGGCGTGCTCGTGAG
AGCCAGGGCCAGGGCGTCGCCGGCGAGGAGGATTGGGTGCGCCACGCGGCTCGAGGGGATACCGGAGGAAGAGGACGC--
-------------------GCCGTGCGAGTGC---GGAGCGTGCGGAGACGAGTGGGAGATGGTCGGCGCCATC------
------GTCGACGAGTTCAAGGAGCACGAGGAGGAGGCGGAGGAGGAAACGATGCGGTGGGCGCTGGAGATGGGCGCCTG
GGCGGTGTGCGTCGGGGTCGGTCTGCTCGCCACCGCCCGCCGGTTCAGACGGAGGCGGCCCGCGCTCCGGTGATCCCGCC
AAGAGTCAAGGGTACATGTTCGCCAGGATATTACA----GTAGCTTCTTGTTTCT-------TTCTCAAGATTGTAGTAT
GTAC----------------------------------------------------------------------------
-------------------------------GTATATACGTACTATATAGACGGAGTAAATTGCAGAAGACCACCACTTT
AGAGATTAGATTTCCAAAAGGCACTATAATACATTTCTTTTGCAAAAAACAACACGTCTATGGTAATGTTTT--------
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TGCAAAAAATACTGATCGGCGGATCAGGCTCAGTTAAGTGAGTTCATGACAGGTGGGTCCATTTTTACCTACGTGACATG
ACTTTTTGTGCCAGGTGAATTTTAATCTAAAATTACAAACTAGACCTTAAAAATTTACACGACACTCCTAAATT------
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-------------------AAAAATGAAAAACGCAATTAGCCCCCGGTTGTCGTTCTGCAGCAGATTGGCGGTGCACTGT
CCGATTTGTCCGTCGCCGGTGGGTGCAGAACGCCCTTGCTCTGGTCGTCGTCCTCCCGATGTAGCCCCACGCGCTGACCA
CACCGAGTTGTGCCCAGGTCGCCGACTACTGCCGAGACAGGCTCCACGCCGCGCTCGCCGAGGAGCTGCGCGCCGCAAGT
ACCCACCAAACAAACCTTGAAATCGACCCAAGCCGCTGACCGAGCCGCGCCGCCAGTCTCCGGCGAGGCGGCGATCCCGA
GCCCCAATAATCCCTTCTCCGGCCACAGGAGCTCCAGGTACGCTTCCTCTTGACGTTCTCTCTTTTGCTTCATCCATTGA
TGGTTTGTAGGTTCTGAAATCCTAGGGTCTTCATCCATTGACCTTTTGTTTTTG------TTTTTGAATAAGATCGGAAG
CCTTGACCTAGCTACGCACATCACAGATGGCGGCCCGGTTCGCTG-AAACAGCCACATAGGAGGGAGGATCTTTATCTGT
TCCCACCATTCTGACTTGACTACCATCTGTATGAAACTCTGC------------------------CCACAGCTTCAGCA
ACAAGAAAAGAAACAGGGGGAGTTCTTTGCAACTACCACTACATGCTGAATTGAAAAAAACTCTCCTTGATGGGCACAGT
TCAACTATAACATCCGG-----AAGAGCACACGACATATGGAACATTTGTTTGTTAGTGAATCT---ACACCGATACTCA
AACCTTCTGCGTCCGTTCAGAT-------------------------------CACGCAGTCCGGACGTCTTTTGCCTCT
GGATCACGCAGTCCGGAAGTGTTTTGCCTTCAAACCCGGTCCTGCATCTTTCGATGCGGTAGCCTGGACGCATTTTTTCT
CGCAAACCGAAGACAAAATATGGGGTTTGCGGGCGTCCGAACCACTACCATGCCCGTGTTTGACTAATTTGGCCCACCGA
ACACCCATCTCCTACGCCCACACGCTTTTCTCGTCTGTGTCCGCATTCATGCGCAGAGCGAACACGACCGCTCACTAGAG
CCCCCATTGAAGCG-------------GCTCTCGGCGGCCCGCTGCAAACGCATTCTCTCAGCATTGAAACGGATTCCGT
CTGCCCGCCTACCTCTATTAAACCAGTGCGAGTGCCAAGGAATCTACTCCGACGCCCGGAGCATCACACGTTTATTCCTG
CGCTGACCGGCATTAAACACCTCTTCGACTGGGTCC
>chr7A_1075
CTC-----------------------------------------------------------------------------
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------------------------------------------GCCGCAATGTGCAGAGGGACGGTGGACGACCTCCGCCC
GCTCGGGCCC---CGGCGGCTCGACGTGCGCGCCTTCTACCTCCGCCTCTCCTCCTCCTCCTCCCACGCAT------C--
----CACGTCGCCGCTGCCCGCGGAGCTCACGCTCGTCTACCTCCCGGCCATCGGCGGCGCCGCGCTGGAGCTGGCCGGC
CGCGTGCTCCCGCCGGCGTGCCCCGCCGAGGCCAACCTCCTGCGCGTCCGCGGC------------GTGGC------CGA
CGACGC------GCCGGCGTACGCGAGCGCCGACCGCGTCTCGGCCCCCGAGGGCGCGCGCTTCGAGGTGTACGCCG---
GGAAGGA---GCTCGCGGCGGAGGGCGCCTTCTTCGCGCGGCGCCGGCTCGACGGAGGAGGGTGGCGCGTCGAGTGCCGC
CGGCCGGCCGG------GTCGCGCTCGCACACGCGGGTGGCGGAGGTGCTGGTCCTCGCGGAGGGCGGCGTGCTCATAAG
GGCCAGGGCTAGGGCGGCG------AGGCGGGCCCGGTGCGCGACGCCGCTCGAGGGGATACCGGAGGAGGAGGATGCGT
CCTCGTGG---------GGGTCGTGCGAGTGCGGTGGGGCTTGCGGGGACGAGTGGCAGATGGTCGGAGACAGCAGCAGC
GATGATGACGACGGCGACGAGTCGAAGGAGGAGGAGGTGGAGGCCGAGACGATGCGGTGGGCGCTGGAGATGGGCGCCTG
GGCGGTGTGCGTCGGGGTCGGCCTGCTCGCCACCGCCCGCCGGTTCAGCCGGAGGAGGGCCGCGCTCCGGTGATCCC---
------------------TGCC----------------------------------------------------------
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>chr7B_1082
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---------------------------------------------GCAATGTGCAGAGGGATGGTGGACGACCTCCGCCC
GCTCGGGCCC---CGGCGGCTCGATGTGCGCGCCTTCTACCTCCGCCTCTCTTC------CTCCTACTCAT------C--
----CACGTCGCCGCCGCCCGCGGAGCTCACGCTCGTCTACCGCCCGGCCATCGGCGGCTCCGCACTGGAGCTTGCCAGC
CGCGCGCTCCCGCCGGCGTGCCCCGCCGAGGCCACCCTCCTGCTCGTCCGCGGC------------GC---------GGA
CGACGC------GCCGGCGTACGCGAGCGCCGATCGCGTCTCGGCCGCCGAGGGCGCGCGCTTCGAGGTGTACGCCG---
GGAAGGA---GCTCGCGGCGGAGGGCGCCTTTTTCCCGCGGCGGCGCCTCGACGGAGGAGGGTGGCGCGTCGAGTGCCGC
CGGCCGGCCGG------GTCGCGCT------CGCGGGTGGCGGAGGTGCTGGTCCTCGCGGAGGGCGGCGTGCTCATAAG
GGCCAGGGCCAGGGCGGCG------AGGCGGATCGGGTGCGCGACGCCGCTCGAGGGGATACCGGAGGAGGATGC-----
-------GTCCTCCTGGGGGTCGTGCGAGTGC---GGGGCTTGTGGGGACGAGTGGCAGATGGTCGGAGACAGCAGCAGC
GATGATGACGACGGCGACAAGCTGAAGGAGGAGGAGTTGGAGGCCGAGACGATGCGGTGGGCGCTGGAGATGGGCGCCTG
GGCGGTGTGCGTCGGGGTCGGCCTGCTCGCCACCGCCCGCCGGTTCAGCCGGAGGAGGGCCGCGCTCCGGTGATCCC---
------------------TGCC----------------------------------------------------------
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>chr7D_1082
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---------------------------------------------GCAATGTGCAGAGGGACGGTGGACGACCTCCGCCC
GCTCGGGCCC---CGGCGGCTCGACGTCCGCGCCTTCTACCTCCGCCTCTCCTCCTCCTCCCACTCA-------------
--TCCGCGTCGCCGCCGCCCGCGGAGCTCACGCTCGTCTACCGCCCGGACATCGGCGGCGCCGCGCTGGAGCTGGCCGGC
CGCGCGCTCCCGCCGGCGTGCCCCGCCGAGGCCACCCTCCTGCGCGTCCGCGGCGCGGCCGACGGTGC---------GGA
CGACGC------GCCGGCGTACGCGAGCGCCGACCGCGTCTCGGCCGCCGAGGGCGCGCGCTTCGAGGTGTACGCCG---
GGCAGGA---GCTCGCGGCGGAGGGCGCCTTCTTCCCGCGGCGCCGGCTCGACGGAGGCGGGTGGCACGTCGAGTGCCGC
CGGCCGGTCGGGTCGCGCTCGCACT------CGCGGGTGGCGGAGGTGCTGGTCCTCGCGGAGGGCGGCGTGCTCATAAG
GGCCAGGGCCAGGGCGGCG------AGGCGGGCCGGGTGCGCGACGCCGCTGGAGGGGATACCGGAGGAGGACGC-----
-------GTCCTCGTGGGGGTCGTGCGAGTGC---GGGGCTTGCGGGGACGGGTGGCAGATGGTCGGAGACAGCAGCAGC
GATGATGACGACGGCGACAAGTTGAAGGAGGAAGAGGTGGAGGCCGAGACGATGCGGTGGGCGCTGGAGATGGGCGCCTG
GGCGGTGTGCGTCGGGGTCGGCCTGCTCGCCACCGCCCGCCGGTTCAGCCGGAGGAGGGCCGCGCTCCGGTGATCCC---
------------------TGCC----------------------------------------------------------
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>chr5D_1227
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------------------------------------------------CCATCGGCGGCGCGGCGCTGGAGCTGGCCGGC
CGCGCGCTCCCGCCGGCGTGCCCCGCCGAGGTCACCCTCCTGCTTGTGCGCGGC------------GCCGACGGCAACGA
CGATGC------GCCAGCTTACGCGAGTGCGGACCGCGTCTCGGCCGCCGAGGGCGCGCGGTTCGAGGTGTACGCCG---
GGGAGGAGGGGCTCGCGGCGGAGGGCGCCTTC---GCGCGGCGCAAT---------GGCGGGTGGCGCGTCGAGTTCCGC
CGGCCGGCCAC------GTCGCGCT------CGCGCGTCGCGGAGGTGCTGGTCCTCGCGGAGGGAGGCGTGCTCATAAG
AGCCAGGGCCAGGGCGTCGGCGGCGGGGAGGATGGGGTGCGCCACGCGGCTGGAGGGGATACCGGAGGAGGAGGAGGC--
-------G---------GGGCCGTGCGAGTGC---GGGGCGTGCGGAGACGAGTGGGAGATGGTCGGCCACACC------
------GACGACGAGTTCAAGGAGCACGCGGAGGAGGTGGAGGCGGAAACGATGCGGTGGGCGCTGGAGATGGGCGCCTG
GGCGGTGTGCGTCAGGGTCGGGCTGCTCGCCACCGCCCGCCGGTTCAGCCGGAGGCGGCCCGCGCTCCGGTGATCCCGCC
AAGAGTCAAGTGTACGTGTTCGCCAGGATTTTGTAGTACGTAGCCTCCTGTTTCTTAAGAAGTTCTCAAGATTGTAGTAT
GTA-----------------------------------------------------------------------------
---------------------------------------------TATACACGCGAATCAATCAACAGTCAAGACATCAG
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---------------------------------ATGCCATCTTACAAATTGTTCATGAGTTGATCCATACATCCAGT---
----------------------------------TGAATTCTCTGCGTCAGTCGCCATACAATC----------------
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----------------------------------------------------------------TGAATAAGATCTGAAG
CCTTGACCTAGCTATGCACATCGTTGGTGGCGGCCAGGTTCGCTGAAACAAGCCACAAAGGATGGAGGATCTTTATCTGT
TCCCACCATTCTGACTTGACTACCATCTGTATGAAACTCTGC------------------------CCACAGCTTCAGCA
ACAAGAAAAGAAACAGGGGGAGTTCCTTGCAACTACCACTACATGCTGAATTGAAAAA--CTCTCCTTGCTGGGTACAGT
TCAACTATAACATCCAGATCCCAATAGCACGCAGCATATGGAACATTGTTTTGTTA------------------------
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------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---SS--S--S-------S-------SSS---S------S---S--SS---S----S----S----SS-S-S--------
----------------------SS-SS-SS--S---SS-----------------------S-S--S-S-----------
-----S------S---------------S------SS---------S---S---S-S---S-------------S-----
------S-S---S-------------SS-------------SS-----S-------------S-S--S-----S----S-
----------------S-------S---S-------------------S-----SS-----------------SS-----
-S--S-------S-----S------S----SS-----------------S----S--------S------------S--S
-----SSSSSS-SSS-SS--------------------------------------------------------------
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-----S-----------SSSSSSSS-----SSS------S-------------S-SSS----------------------
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-------------------------------------------------------------SSSSSSSSS----------
S-----S----------S-S------S-----------------------S-----------------S-----------
-------------------------------SSSS------------------------------------------S--
-----------------------------------S-SS-----------------------------------------
-----------------------------------S-SS---------------------S------------------S
----------------S----SS------------------------------------S--------------------
---------------------------S--------------------------------------------------SS
SS------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
-----------------------S------------------S-------------------------------------
--------------------------------------------------------------------------------
------------------------S---------------S---------------S-----------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------------------S--------
-------S------------------------------S-----------------------------------S-----
---------------------------------------------------------S----------------------
-----------------------------------------------------------------------------SS-
S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--------------S--------------------
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-----------------------------------------------S---S-------S-S-S-SS--S----------
-------------------------------------------------------------------------S------
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------------------------------------------------------SSSSSS--------------------
---------------------SS------------------------------------------S--------------
------------S--------S-S----------------SSSSSSS--------S------------------------
---------------------------------------------------------S-----------S----------
----------------------------------------------------------------S-S-----S-------
--------------------------SS-----S--S-S-------SSSSSSS----------------------S----
-----------------------------------S-----------------S-S--------S-------S-------
-----------------S-------------------S-S---S------S-----------------------------
--------------S------------------S-SS-----------------------S---------S-----S---
--SS----S-----SSSSSSSSSSSSS---------S---------------S-------S-S-----------------
------------------------------------S------------------------SS-----------------
-------S-----S----------------------
>forward_30
----------AGGCGGTTCCCCTTTTTAGG--------------------------------------------------
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>reverse_3447
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------AGTTTTAAATAGCCGGCCGC------------------------------------------------------
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>forward_2503
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---CCCACGGAAACAACTCGTCT---------------------------------------------------------
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>reverse_5237
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------------------------------------GAGGAATCTACTCCGACGCC------------------------
------------------------------------
