>input_sequence_63268
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-------------------------------------------AGCAACCAACAATCATCACTGTAACTAACCAGAAGAA
GCACAAGA------------------AGAAG---------CGATGGCGTTCCGACGCCGTTCATGCGTAGTAGCA---GC
ACTCCTCGCCCTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCTGACGGTCTTCTGGGGCCGGAACAAGG
ACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCGTCATCATCTCCTTCTACAGCGTCTTC
GGCCACGGCAGGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAGCACTGCCGGGGCAA
GGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCCGTCATCACAGTCCGCGGCCGACGTCG
CCGACAACCTGTGGAACGCGCACCTCGGCGGCGGCCGCCGCGGCGTGTTCCGCCCGTTCGGCGACGCCGTGGTCGACGGC
ATCGACTTCTTCATCGACCA------GGGCG---CGCCGG---ACCACTACGACGAGCTGGCCAGGCGTCTGTCCGGCTA
CAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGTTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGCACGTCCAGA
GGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGAAGACCGGTGCTCCTACAACCACGTGCAC
AAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAGGTGTACATCGGGCTGGCGGCGGC
GAACGTGCCCGGG------AGGAACGACAAGGTCGGCCTCATGTCGATGAACTACGACC--------TCATGCCCAGCGT
GAAGCAGGCGGCGAACTACGGCGGGGTCATGCTCTGGGAGAGGTACTACGACAAGCAGACCGGATACGGCCGCGACCTCT
ACAACGGCGGCAT-------------------------------------------------------------------
---------CAACTAATAATCAACACGCACGCATGCATGCATTATAGTGTGTGTCTGA------CAATAATAAA------
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>chr2D_1_TraesCS2D01G039300
GGGAAGGTATTTAGCCCAACGAGAGGAAGGAATTTAGTTAGCGAGAGGATTCCATTCACACCTTGCTTGATTCGTATCGT
ATGTAAGTATGTACGCGGGGAAAGGGTGAGGCCGATCAGACACGAAGATCATAAACTTTCCAGCTTCTACTCCACCCAAA
CGTTGTTTGTCATCTGCCTGACACGGCTCCGGATCGAGCAGTAACCCCACCGTTCGGTCTAGGGCTAGGTGCCTTCAGTC
CAAACCAACGATACCGATCTGCAGTCTGTCGAACCATGCATTCAGATCGGCACATTCAATGCACACCATGTGGATATCTT
CTCAAGCTCCACGCCGGAGCCAGGATTTGAACTTACGTTGAAAACCAACATTTGGTTTCTTTGATGTCTGCCTTGCTTGT
GTATAATTTTCTTAAATTGCTTTCTCCAATAAATAATTTTCTTAAACCAACATTTGAGCCAGGACTTTTGCCCTTTTGTA
GAGACCCTTTTCAATAATTTTCTTCAATAAATTGTTTTATTGCTCAAGTGTAACTTGACTAAGAAAATCATTAGTGAAAT
CAATAAAATCACTAAAAGTAACAACCTTGAATTTATCGTTGTTATTGTTTTCTAT---------------------AATG
TGAGAGGAACTCTTCTTTCCAAGGTCGTCGTTGATAGCTTTCAAGAACTCATGCTCTTGAACTCATAGCT----------
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------------------------------AATGTGGGCGGCCCTCCCGGACGTTTGAGCGTCTGATTCGTGGTCAATCA
ATGGGTCTTCTCCATCCATGTGCGCGGCGCCCAGAGCTAGCATCTGCCGTTTTC-TTTTCTACGCTTGACTTGTGGTCGA
TCGTCCATCTGATTTGACCCCATCCAGACCAGTT-GCCGCCGCAGCCAATCGAAATTGTGCCGGCCGGCACACAAGAAAT
GACTTGCACGTGCGTACGTACCT---------------TTCTTCCTTGCCTATTACC-----TACTGCACGCGCGCTCTA
ACTCTCTCTCTATATAGACTTGGCCATGATCAGCATTCTTCACAGCAACCAACAATCATCACTGTAACTAACCAGAAGAA
GCACAAGA------------------AGAAG---------CGATGGCGTTCCGACGCCGTTCATGCGTAGTAGCA---GC
ACTCCTCGCCCTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCTGACGGTCTTCTGGGGCCGGAACAAGG
ACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCGTCATCATCTCCTTCTACAGCGTCTTC
GGCCACGGCAGGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAGCACTGCCGGGGCAA
GGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCCGTCATCACAGTCCGCGGCCGACGTCG
CCGACAACCTGTGGAACGCGCACCTCGGCGGCGGCCGCCGCGGCGTGTTCCGCCCGTTCGGCGACGCCGTGGTCGACGGC
ATCGACTTCTTCATCGACCA------GGGCG---CGCCGG---ACCACTACGACGAGCTGGCCAGGCGTCTGTCCGGCTA
CAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGTTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGCACGTCCAGA
GGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGAAGACCGGTGCTCCTACAACCACGTGCAC
AAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAGGTGTACATCGGGCTGGCGGCGGC
GAACGTGCCCGGG------AGGAACGACAAGGTCGGCCTCATGTCGATGAACTACGACC--------TCATGCCCAGCGT
GAAGCAGGCGGCGAACTACGGCGGGGTCATGCTCTGGGAGAGGTACTACGACAAGCAGACCGGATACGGCCGCGACCTCT
ACAACGGCGGCAT-------------------------------------------------------------------
---------CAACTAATAATCAACACGCACGCATGCATGCATTATAGTGTGTGTCTGA------CAATAATAAATAAATT
AAACACTGATGTGACGTGTGGTATTGTATTGTACG---AATAAATCAGAGATCCATATATGGACCGCTCGATGTTTCAAC
ATTTTGTATTTGATGCACTGCTAGTACGTCTTGCACTAGTACAACAATATAAATAGCTTAACGGATTTGATATTTCACGC
CTAGATGTGAAATAGCTACCTCACATCTAATTTTCTTATTATTTATTTTGTTTTCTTTGACTCACAAAAAAAATTGTTTT
GTCTGACCTCACGATTTGTTTGTGTTCAAGGGTACGCTTGTGCAGCCCGAGAGTAACTAGTTGGCGAGCGCTCCCTTGGG
AGACTCGTAACAATCACTCGCGGGTGGGCTGAGAGCACGCCACTTGGCGCTCTCCTAATCACTGCCACATATCGCGCTCT
GGGCGCTCCCTCCGTATTTTTCTATAATTTTTTCACACTTGTTTTTGGCTTTTTAAACGTTTTTCTTTTGACTTTTTGGT
TTTTCACCGGTCTTCCTTAGCTTTTGGACCAGATTTATTTGTTCGAAGAAAATAATTTTCCACATGAAAAAACGTGTTTT
TTTGCTTCCGCAAGAGGCACAGTTTTGCTTCCGTGAGAGGCACAACCATGCCTCTCGGAAACGAAAAAAACGTGCTTTTT
TTCTTCCGCGACAGGCACGGTTTTGCATCCGCGGGAAGCACGATTTTGCTTTCGTGCTTTCTGTTTTTTCCTTTCGTGAG
AGGCATGGTTGTGATTTCGCGAGAGGCACAACCGCACCTCTCAGAAACGAAAAAAACGCATTTTTTCCTTCCATAAGAAG
CACGGTTTTGCTTCCGCAAGAGACATGGTCGTGCCTCTTTCAAAAAGGCAAAAGTACATGCTCCCGGTTCGGTTTTTTCG
TCCGGTTTTTTCATGAAAAAAGGTCGTCAAAACCTATCAACATTGGATCTAATTTTGAAAATCTCAACGCGAGGAATCCA
ACTGTGAAAATGGTTTGAGATTTCAACGCATGGTTTA
>chr2A_473
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------------------------------------------------------------------------CTTTTGTA
GACACATCTTTCTATAATTTCTTTCAATAAATTGTTTTCTTGCTCAAGTGTAACTTGACTTAGAAAATCATTAGTGGAAT
CGATAGAATCACTAAAAGTAACAACCTTGAATTTAGCATTGTTATTGTTACTACTACACAAGAGAAGTTGGTTGGCAATG
TAAGAGGAACTATTCTTTCCAAGGTCGTCGTTGATAGCTTTCAAGAAATCTTGCTCTAAATTGAGCTTCTCGAAGCAGCT
TCTCATGAGACTTCAAAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAGACTTACTGCCATACAACG
TTATCCTAGCCGAGAGTGGACGCGCTACTACTTATACCTTATTGATGGATGACTATAAATAGAAGAACCCTGGAACTCTC
CTTACCTTGTTATATACTAGCAAAAATGCCGTGTGTTGCAATGGGAGAAGCAAACCTTCCATTTTAGTTCGTGAGTCCGT
GCATTGTTATGGAAAAACACTCATGTATGTGGTGATATCCAGATTCATCTTAACAAAAACTTAATTATCTATTTGTTAAA
GTTTCATACATGCATTTGTCTACATAAAGAGATACATAGCTGAATGCCCGTGCATTGCTATGGAGAAAAAAATCAACTTG
TTTATTTCCCAATTAATGCAAGGCACCTTGATCACCCTGAACTCTCTTTTCACCCAAGTAACATAAATCTACACTTTAGT
CGCGACTCACGAGCAACGCCGGAAAAAAGTCTCTGATGAAAAAAACTATAGACCAAAGGTACTTTGGGATGCTAGTTTGG
GAACAGGGTATGTATTCCCGCCCTTGACAACCTAAATTTGTTTATAGCCTCCTAGATATTTCCGGAAACATCATACATCA
ATATCATGGTTAGCAATATCAAATGTGGTATTGTCTGAATCTCAATGCAAAAATTCAAAACATGCATCCTAGCTACCTAC
TTCTGCTTCTCAGCTTCACATATATTTAAAGTAAACACCTGAGCATTTTTGCCATGCTGAGAAATTAAATGGGGTTACAT
TAGCAATGCAGTAGACCAGACAAAATCTGAGTTTATACATACACTACAATCCATTCTGATCTATATGTTGGAGTTACCCA
AACAAATATTAATAATATCAGTAGGCCTGATCAACATATATAATAGAAACAAACAAACAAACAAAAGTACCATAGCACCA
CAAATCTTCACATACAATATTACCTAACTAATATCGCAGCTCAAATTCTTATGCCGCTTTTACCATTTATTTCCTTTGTT
TCCTCCTTCCCATCAGGCCAAAGGCCCATTTGGCCGACACAAAAGCCCATCCGGCTATTATGACGCACGAAGAAACGGAC
CGGATCCTCAAAAAAGAAAAAACAGGTGCTGCTAGTCCATATCAGTTACGTCTAGCATTTTTGGCTCAAAAAGAGTTACA
TCTAAGATTCACCCCTCAAAAAAAGTTATGTCTAGGATTCACCCCTCAAAAAAGAAGTTACGTATAGGATTTGTATATGC
AATCGCACATCGCTGCTACCTCCTCCTCGCGATAGCCACGATCGGACGAACAGGTAATAGAGCCGTCGAAGCTGTGATTC
CCGAATTTTCCTTTTCCCTCCGTCGTCTATCATGATTTTTATCTCTCTCTCGCTCATAAGAGAGGAGGACACCAAGGCCA
TGGGGCAACCCCTCGGAGCACCACCGACCCCTTGACCAAGGTGACCCGCACCGGCAAGCGTTCCTCACAGACCGTCTCTG
CCTGGCAACCCAGTCCTCTGTGGGTCTGCTCTGTCCGCCATGGACGCAAACCTCGTCCCCATGCCTTCTCGCAAACTTTC
CCAAGCCGCAGCCATGGCGCTGCCGCCCAGTGCCACGACGCCGAGCACAGAGGTCGGCTGCACTTGGACCCCTCCTCCTA
GGACATCACCGGGCCACAGCCGCCTCCCCATTTTCTGCCCGAATATATATAATAGAGCACCTGCACCCAGACCCTCTTTA
TCTAGCCATTCATTTTCCGCATCGCGATACGTAAGTACATTTCTCTTTTTTGTTTCTCTCACACAGAATATATCTTGGAG
TTCAAACCTATGCAGCGTGGTAAAGCTTTCTAACTGAATATAGGATAAATCTTTCATATTTTTTTGTCAAACATAAATAT
ACAAAATAAGTTTTGTTTGATTAAAAAATCATATTATTACTATTAATATCGGACAAAAAATTCTGAAAGATTTATCCTAG
ATTTTAGTTAGAAAGCTTTGCCATGCTGCAATAGTATTTGTTTTTTCCTGAGCAAATATGTTTGTTGCTCTTTATTTAGC
TTCACGGGACAATGAGGGGTGGAGGACAACGACCGCGAGCACATTGCCGCAAGCTCACGGAGGGAGGCACACATCTCATC
CAGTGGATCAATCCTGCTTTTGAACCGAGCGTAGCCGTTTGTTGACATTTGACAAAAAAGGACGCGCGACGTGCAGTGGC
CACATATGGAGACCATATCGAAATATTTTCCGTGGTATCTTTCGCCTCCAAATTTAGATGGGAATCAAAAATTTCTCAGC
GAGAAAATCCAATGGTGACGTCACCTGGGGGCTGGGGCCCACCATGACTGGGTTAGATTAGGTTTTTCATCTTCATTTGA
ACTTTATAACCAGGACCAAATCCAAAATATCTTGAGAGTTTGGTCCAAGCGTGAGAGCAGGACCTCAAATTTTTTGACAC
AAATTTTGGGCGGGATCCGATGAATATCTACATCCGCAGACCTCGTCTCTAGCAGGAAGTACCATGCCTAGTGGTTAAAA
TGATATAAATATGAACTTTGTATCACATAAAATAACAATTTACATTAATGACCTACAGACGGTCAAGATTATTGCGGTTG
AAATGAAGCCTATAAATCACTGGACTTTAAATATGTCAACATCAGGGGCAACAAGAGAAAAAAAATACGCCATAATATTG
GATGTGTAAAATTGTTGACAAATGCTAGTTTAGGACCATATATCCACAGTTCACATCCATAATTTTTGTGGATGCATGCT
CGTCGGCCAAGTTGATGACGAGCGTGTAGCTGAGCTTTACATGGTTGTGGCTAGGCAGGCCGTCCGCGACGACGACATAG
ATGTAAAGGGTTGGCGTTTAGTTAGTGCGCCAAATAGACGATGTATGTATATCATGAGGTGAAGATTTTGTTTTTGTTTT
TTGCACCGAGGGCGCGTGGATGTACTCCCTCCATTCCTAAATATAAATCTTTGAAGAGATTTTATTGTAAACCACATACG
GATGTACGTAGATACATTTTACAGTGTAGATGTACTTATTTTGCTCCGTATATGTAGTCTATAGTGAAATCTCTAGACTT
ACTCAGGGACGGAGGGAGTAGTAGGACCAAAACGCGCGCGGCACTCGGGGACGTTTGAGCGTCCGCATT------AATCA
ATGGGTCTTCT----CCATGTGCGCGGCGCCTAGACATGGAATCTGCCGTTTTC-T-TTCTACGCTTGACTTGTGGTCGA
TCGTCCATCTGATTTGACCCCATCCAGACCAGTT-GGCGCCGCAGCCGATCGAAATTGC----GCCGGCACACAAGAAAT
GACTTGCACGCGCGTACGTACCTTGTGAACAAATGCCTTCCTTCCTTGCCTATTACCCTACCTACTGCACGCGCGCCCTA
GCTCTCTCTATATATAGACTTGGCCATG--------------------------ATCATCACTGTAACTAACTGCAAGAA
GAAGAAGA------------------AGAAGAAGCAGTAACGATGGCGTTCCGACGCCCTTCATGTGTACTACTAGGAGT
ACTTCTCGCCGTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCTGACGGTCTTCTGGGGCCGGAACAAGG
ACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCGTCATCATCTCCTTCTACAGCGTCTTC
GGCCACGGCAGGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAGCACTGCCGGGGCAA
GGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCCCACCTCACAGTCCGCGGCCGACGTCG
CCGACAACCTGTGGAACGCGCACCTCGGCGGCGGCCGACCCGGCGTGTTCCGCCCGTTCGGCGACGCGGTGGTCGACGGC
ATCGACTTCTTCATCGACCA------GGGCG---CGCCGG---ACCACTACGACGAGCTGGCCAGGCGTCTCTCGGGATA
CAACAAGTACTACCGCGGGGCGCCCGGGGTGCGGCTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGCACGTCCAGA
GGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGACGACCGGTGCTCCTACAACCACGTGCAC
AAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAGCTGTACATCGGGCTGCCGGCGGC
GAACGTGCCCGGG------AGGAGCGAAAAGGTCGGCCTTGGGTCCATGCAATATGACC--------TGATGCCCAGCGT
GAAGCAGGCGGCAAATTACGGCGGGGTCATGCTCTGGGACAGGTACTACGACCAGCAGACCGGATATGGCCGCGAACTCT
ACAACGGCGGCATCAACTAATA---ATCTACACGCATGCATGCATGCATTATAGTGTGTGTGGGGCAATAATAATTTAAA
CACACGCATCAACTAATAATCTA----CTCGCATGCATGCATTATAGTGTGTGTGCGC------CAATAATAATTTAAAC
ACAC-CTGATGGGATTAGTGGTATTGTATTGTACG---AATAAATCAGAGATCCATATAGGGACCGCTGGATGTTTCAAC
ATTTCGTATCTGATGCACTA-TAGTACATGTTGCACTAGTGCA-------------------------------------
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>chr2A_697
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-------------------------------------GCGGCACTCCCGGACGTTTGAGCGTCTGATTCGTGGTCAATCA
ATGGGTCTTCTCCATCCATGTGCGCGGCGCCCAGAGCTAGCATCTGCCGTTTAATT-TTCTGCGCTTGACTTGTGATCGA
TCGTCCATCTGATTTGACCCCATCCAGACCAGTT-GGCGACGCAGCCAATCGAAATTGTGTAGGCCGGCACACAAGAAAT
GACTTGCACGCGCGTACGTACCT----------TGCCTTTCTTCCTTG----------------------------CCTA
GCGCTCTCTATATATAGACTTGGGCATGATCAGCATTCTTCACAGCAACCAAGAATCATCACTGTAACTAACCAGAAGAA
GAAGAAGC------------------AGAAGTAGA---AGCGATGGCATTCCGACGCCCTTCGTGCGTAGTAGCAGGGGC
TCTTCTCGCCGTCTCCTTCCTCGCCGCCACAGCAACCGCCGGTGACCACGGCCTGACGGTCTTCTGGGGCCGGAACAAGG
ACGAGGGCTCCCTCAGGGAGGCCTGCGACACCGGCATCTACAA------CACCGTCATCATCTCCTTTTACAGCGTCTTC
GGCCACGGCAGGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAGCACTGCCGGGGCAA
GGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCGCTGCCGTCCTCGCAGTCCGCGGCCGACGTCG
CCGACAACCTGTGGAACGCGCACCTCGGTGGCGGCCGACCTGGCGTGTTCCGCCCGTTCGGCGACGCCGTGGTCGACGGC
ATCGACTTCTTCATCGACCA------GGGCG---CGCCGG---ACCACTACGACGAGCTGGCCAGGCGTCTGTCCGGCTA
CAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGCTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGCACGTCCAGA
GGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGACGACCGGTGCTCCTACAACCACGTGCAC
AAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCGGGAGCAAGGTGTACATCGGGCTGGCGGCGGC
GAACTTGCCGGGG------AGGAACGACAAGGTCGGCCTTGGGTCCATGCAATATGACC--------TCATGCCGAGCGT
GAAGCAGGCGGCAAACTACGGCGGGGTCATGCTCTGGGACAGGTACTACGACAAGCAGACCGGATACGGCCGCGAACTCT
ACAACGGCGGCAT-------------------------------------------------------------------
---------CAACTAATAATCTA----CACGCATGCATGCATTATAGTGTGTGTGTGTGTGTAGCAATAATAATTTAAAC
ACAC-CTGATGGGATTAGTGGTATTGTATTGTACG---AATAAATCAGAGATCCATATAGGGACCGCTGGATGTTTCAAC
ATTTCGTATCTGATGCACTA-TAGTACATGTTGCACTAGTGCA-------------------------------------
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>chr2B_737
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-----------------------------------------------------------------------------TCA
ATGGGTCTTCTTCATCCATGTGCGCGGCGCCCAGAGATAGCATCTGCCGTTTTC-TTTTCTAGGCTGGGCTTGTGGTCGA
TCGTCCATCTGATTTGACCCCATCCAGACCAGTTTGGCACCGCAGCCAATCGAAATTGTGTAGGCCGGCACACAAGAAAT
GACATGCACGCGCGTACGTACCT---------------TTCTTCCTTGCCTATTACC-----TACTGCACGCGCGCTCTA
A--CTCTCTATATATAGACTTGGCCATGATCAGCATTCTTCACAACAACCAACA---ATCACTGCAACTAACTAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAGA---AACGATGGCGTTCCGACGCCCTTCATGTGTAATACTAGGAGC
TCTTCTCGCCGTCTCCTTCCTCGCCGCCACGGCAGCCGCCGGTGACCACGGCCTGACGGTCTTCTGGGGCCGGAACAAGG
ACGAGGGCTCCCTCGGGGAGGCCTGCGACACCGGCATCTACAA------CACCGTCATCATCTCCTTCTACAGCGTCTTC
GGCCACGGCAAGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCGCCGACATCAAACACTGCCGGGGCAA
GGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCCGTCATCACAGTCCGCGGCCGACGTCG
CCGACAACCTGTGGAACGCGCACCTCGGGGGCGGCCGCCGCGGCGTGTTCCGCCCGTTTGGCGACGCCGTGGTCGACGGC
ATCGACTTCTTCATCGACCA------GGGCG---CGCCGG---ACCACTACGACGAGCTGGCCAGGCGCCTGTCCGGATA
CAACCGGTACTACCGCGGCGCGCCCGGGGTGCGGCTGACGGCGACGGCGCGGTGCGTTTACCCGGACTGGCACGTCCAGA
GGGCGCTGGACACGGGGCTGTTCGAACGGATCCACGTCAGGTTCTACGGCGAGGACCGGTGCTCGTACAACCACGTGTAC
AAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAGGTGTACATCGGGCTGCCGGCGGC
GAACGTGCCGGGG------AGGAACGACAAGGTCGGCCTGCCGTCGATGAACTACGACC--------TAATGCCCAGCGT
GAAGCAGGCGGCAAACTACGGCGGGGTCATGCTCTGGGACAGGTACTACGACAAGCAGACCGGATACGGCCGCGACCTCT
ACAACGGCGGCATCAACTAATA---ATCAACGT-----------------------------------------------
--------------------------GCATGCATGCATGCATTATAGTGTGTGTGTGTCTGAAAAT------AATAAATG
AAACACTGATGTGACGGGTGGTATTATATTGTACTTCCAATAAATCAGAGATCCATATATGGACCGCTGGATGTTTCAAC
AT------------------------------------------------------------------------------
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>chr5D_1140
CTC-----------------------------------------------------------------------------
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-------------------------------------------------------ACCGTCTTCTGGGGCCGGAACAAGG
ACGAGGGCTCTCTCAGGGAAGCCTGCGACGCCGGCCT------CTACACCGCGGTCATCATGTCCTTCCTCAACGTCTAC
GGCCACGGCAAGTACCGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGGCGACATCAGGCACTGCCAGTCCAT
GGGCGTCACCGTCTCCCTCTCCATCGGCGGCTTCGGCGGCGACTACGCGCTCCCGACCAACCGGTCCGCGCTCGACCTCG
CCGACCACCTCTGGTTCTCCTACCTCGGCGGCAGGCGCAGGGGCGTGCGCCGCCCGTTCGGCCGCGCGCGGCTGGACGGC
GTCGACCTCTTCATCGAGCG------GGGCG---GGCCGGCGGAGCACTACGACGGGCTGGCGAGGGGGCTGGCCAGGCG
CAGGGC------CAGCGGGGGGAAGGCGCCGCGGCTGACGGCGACGCCGCGCTACGCGTTCCCGGACAGGCTTGCGGCGC
CGGCGCTCTCGACGGGGGTCTTCGAGCGCATCCACGTGAGGTTCTACG--------------------------------
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>chr5B_1140
CTC-----------------------------------------------------------------------------
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-------------------------------------------------------ACCGTCTTCTGGGGCCGGAACAAGG
ACGAGGGCTCTCTCAGGGAAGCCTGCGACACCGGCCT------CTACACCGCGGTCATCATGTCCTTCCTCAACGTCTAC
GGCCACGGCAAGTACCGCCTCGACCTCTCCGGCCACCCGCTCGCCGGCATCGGGGACGACATCAGGCACTGCCAGTCCAT
GGGCATCACCGTTTCCCTCTCGATCGGCGGCTTCGGCGGCGACTACGCGCTCCCGACCAACCGATCCGCGCTCGACCTCG
CCGACCACCTCTGGTTCTCCTACCTCGGCGGCAGACGCAGGGGCGTGCGCCGCCCGTTCGGCCGCACGCGGCTCGACGGC
GTCGACCTCTTCCTGGAGCG------CGGCCGGCCGGCGG---AGCACTACGACGCGCTGGCCAGGGAGCTGGCCAGGCG
CAAGGC------CCGCGGGGGGAAGGCGCCGCGGCTGACGGCGACCCCACGCTACGCGTTCCCGGACCGGCTCGCGGCGC
CGGCGCTCTCGACGGGGGTCTTCGAGCGCATCCACGTCAGGTTCTACG--------------------------------
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>chr1A_1146
GTG-----------------------------------------------------------------------------
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-------------------------------------------------------------TTCTGGGGCCGGAACAAGG
ACGAGGGCTCCCTCCGGGAGACCTGCGACACCGGAAGGTACACCTACACCACCGTCATCGTCTCCTTCCTCGACGTCTTC
GGCCACGGCAGGTACCACCTCGACCTCTCCGGCCACGACGTCTCCGCCGTGGGCGCCGACATCAAGCAGTGTCAGTCCAA
CGGCATGTCCATATTCCTCTCCATCGGGGGCTTCGGCGGCCAGTACTCCCTGCCGAGGCGCAGGTCCGCGGCGGACGTGG
CCGACTACCTCTGGAACGCCTACATGCTCGGCACGCGCGCGGGCGTCCACCGCCCGTTCGGCGACGCCTACGTCGACGGC
ATCAACTTCTTCATCGACGGTGCCGCCGGCG---CGCGGCCCGAAAACTACGACGAGCTGGCCAGGCGGCTATGGGACTA
CAACAAGGGCTACCGTGCCAGGACGCCGGTGCAGCTGTCGGCGACGCCGCGGTGCGGGTACTCGGACAGGCGCGTGGAGC
GGGCGCTCGCCACGGGGCTCTTCAACCGGATCTTCGTCAGGTTCTACGACGAA---------------------------
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>chr1B_1149
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-------------------------------------------------------------TTCTGGGGCCGGAACAAGG
ACGAGGGCTCCCTCCGGGAGACCTGCGACACCGGAAGGTACACGTTCACCACTGTAATCATCTCCTTCCTCGACGTCTTC
GGCAACGGCAGGTACCACCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAC
GGGCAAGCTCATCTTCCTCTCCATCGGGGGCTTCGGCGGCCAGTACTCCCTACCGACCCGCAGGTCGGCGGCGGACGTGG
CCGACTACCTCTGGAACGCCTACATGCTCGGAACCCGCAAGGGCGTCAGCCGCCCGTTCGGCGACGCCTACGTCGACGGC
ATCAACTTCTTCATCGACGGTGCCGCCGGCGCGCGGCCGG---AAAACTACGACGAGCTGGCCAGGCGGCTCTGGGACTA
CAACAAGGCGTACCGCGGCAGAACGCCGGTGCAGCTGTCCGCAACGCCGCGGTGCGGGTACCCGGACAGGCGCGTGGAGC
GGGCGCTCGCCACGGGGCTGTTCAACCGCATCTTCGTCAGGTTCTACG--------------------------------
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>chr2B_1216
TCA-----------------------------------------------------------------------------
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----------------------------------------------------------CATCTCCTTCTACAGCGTCTTC
GGCCACGGCAAGTACTGGGGCGACCTCTCCGGCCACCCGCTCTACGGCATCGGCACCGACATCAAGCACTGCCGGGGCAA
GGGCATCGTCGTCCTCCTCTCCATCGGCGGCGGCGGCACCCAGTACTCCCTGCCGTCATCACAGTCCGCGGCCGATGTCG
CCGACAACCTGTGGAACGCGCACCTTGGGGGCGGCCGCCGCGGCGTGTTCCGCCCGTTCGGCGACACCGTGG-CGAAGGC
ATCGACTTCTTCATCGACCA------GGGCG---CGCCGG---ACCACTACGAGGAGCTCGCCAGGCGTCTGTCCGGATA
CAACCGGTACTACCGCGGCGCGCC-GGGGTGAGGCTGACGGCGACGCCGCGGTGCGTGTACCCGGACTGGTACGTCCAGA
GGGCGCTGGACACGGGGCTGTTCGAGCGGATCCACGTCAGGTTCTACGGCGAAGACCGGTGCTCGTACAGCCACGTGCAC
AAAGACGGGGTGATGGCGCAGTGGAGCAAGTGGACGGCGAGGTACCCCCGGAGCAAGGTGTACATCGGGCTGCCGGCGGC
GAACGTGCCCGGGACTGGGAGGAACGACGAGGTCGGCCTCATGTCGATGAACTACGACCTGATGCGGTGATGCCCAGCGT
GAAGCAGGCGGCAAACTACGGCGGGGTCATGCTGTGGGACAGGTACTACGACAAGCAGACCGGATACGGCCGCGACCTCT
ACAACGCCGGCATCAACTACTAATAATCAACGT-----------------------------------------------
--------------------------GCATGCATGCATGCATTATAGTGTGTGTGTGTCTGAAAAT------AATAAATT
AAACACTGATGTGACGGGTGGTATTATATTGTACTTCCAATAAATCAGAGATCCATATATGGAC-----GATGTTTCAAC
AT------------------------------------------------------------------------------
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>SNPs
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--S--SSS----S-------SS----------------S---------------------S---------------S---
-S---S-----------------------------S-S-----------SSSSS--------------------------
-S---------S-----------------------------------S--S------SS-SSSSSSSS------------
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--------------------------------S-S-S-----S-------------------------------------
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------------------------------------S-----------------------SS------------------
----------S---------------------------------------------------------------------
---------S----------------------------------------------------------------------
-S-S------------------------------------------------------S---------------------
---S------S---------------------------------------------------------------------
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----------------------------------S---------------------------------------------
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------------S--------------------------S----------------------------------------
--------------------------------------------------------------------------------
---------------------S-SSS----------------------------S--S----------------------
----------------S---------------------------------------------------S-----------
----S----S---------SS------S-S----------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_206
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--------------------------CTCCGGATCGAGCAGTAACC----------------------------------
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>reverse_4482
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-CACAAGAAGAAGCGATGGCG-----------------------------------------------------------
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>forward_353
--------------------------------------------------------------------------------
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-------------CCGGAGCCAGGATTTGAACT-----------------------------------------------
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>reverse_5877
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------------------------------------CTTGTGCAGCCCGAGAGTAA------------------------
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-------------------------------------
