>input_sequence_63100
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----------------------------------ATGCTATCAAGTACAGAGCCAGAGCAGGAGGGAGAAGTAGGGCGCT
ACCGAGCTCAACGGATAGGACAGTGCACCACTAACCTGA---------------CGACACCGGAGCCATGGAAGAAGGGC
GGGACGGGAAGGAGGCCAAGTCTGAGAGTTCAGAGGACCGGGGCAC----------------------------------
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------------------------------------------------------------------------GGATCTGC
GTCGTGTGGGGGCTCGTCGTCATGGTCATGGTCTACTCCGTCGGCCACGTCTCCGGGGCGCACTTCAACCCCGCCGTCAC
CATCGCCTTCGCCGCCTGCCGACGCTTCCCGTGGAAGCAGGTAGTTTCAACACAGGGATCTTCATTGGGATGAAATG---
TGATGCGATCAGAAGCACTGTAGATTATCCGAAAAAT------------------------------GTCTGGATGTGTT
GCAGGTGCCGTCCTATGTGCTGGCTCAGGTGCTGGGGTCCACGCTGGCGAGCCTGACGCTGCGGCTGACGTTCGGCGGCG
CGCACGGGCACTTGTCCGGGATGACGCCGTCCGGTTCGAGCACGCAGGGGGTGGCGCTCGAGTTCATCATCTCCTTCTAC
CTCATGTTCGTCGTCTCGGGCGTGGCCACGGACGACAGAGCAGTAAAGACCACCGCTTCACGCCACCCAGCACTTGGAGA
TCG----GAAACGACGAACTTCTGCTGATATGTGATAGCTCT--------------------------------------
-------TGCAGGTTGGTGACTTGGCTGGTCTCGCAGTTGGTGCCACCGTCGTGCTCAACGTGCTCTTTGCCGGGTACAA
GCCGATCTTAAGCATAGACGTGG-----------------------TCTTGATCTTACCTCAAACT----CCTGACATGA
CATGTCGACGTTGCATTCTTCTTCGT-------------GGATGTGCAGGCCGATCACGGGGGCGTCGATGAACCCTGCG
AGGAGCCTAGGGCCGGCGATCGTCGCCTGCCGGTACGGCGGCGTGTGGGTGTACGTCGTCGGCCCGGTGTGCGGGACGGT
GGCGGGAGCCTGGACCTACAACCTCATCTGGCTCCCGTACAAGCCCATCGCCAGGAGCGGGTCGACTGCGTCGTTCCTCA
GACCGCTGTAA---------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G139400
CACGGGATAAGGAACCATCCATTCTGCGGTGATATGACGACTAGGGGTCTTATGGGGTGTGAGGTAATAATGTGACATCT
AAAGTACTCCTTCAGTTTCTAAATATAAGACTTTTTAGATATTTCCATACAGATTACATACGCGTACGGTTGTATATAGA
CATATTTTAGAGTGTAGATTCACTCACTTTGCTTTGTATGCAGTCCATATTAGAATCTTTAAAAAGCCTTATATATAGGA
ACGGAGGGAGTAAGTTGTAAAAGTATAAGATATGAAACATAATGTATTGTAAACATGCGGCGTTTTGCCCACACATATTG
AAGTCGTTTATAAGTTTTATGTACAGAAAATTAGTTTCTAAATTGCTAACTCACATTTCAGTTTCTACCACACAACCAAA
ATTTGGTGTTTAAAGTTACACTTTCTCTCTATTTCCTTAGAGCTAAAAAAAGAGCTGCCTATTATTCCCTTTTTTATGAG
ACCAGTTATCCCATTTTATTGACACGTGATGCACGTGGATCACACGTGCATGACTGCTAGTCAACAAATTGTAATCGGTT
GTATATTTGGTCTCCAAAATAAATACCACGTAAAACAATGATCAGGGTTTTAACAGTTGATCCATCTTCGTCAGACAATA
GTTCGTCTCCAGTTCATGAGCAAACCAACAGGTGCAAAC--TTTTTTCCTTTCAAAATTTTAGGATAGTACAATCATGAA
GA---------------------------TCATAAAACTTTGTGTGGATGCATATAAGAAATTGAAAAAGCTATTCCGTA
TTTTTTTTACTGAAGATGAATTCAGTTAGGCGTGAAAAGTTGTGCCAAGACTAGACAGACACTAATTTTG----------
------------------TCATGGTTAGCCCTGGGTGGTTGAGTTGGTTACGTTT--------TTGCACACGCCTACTTC
AGTG-GTTGCATTAAGCCACATCCAGTCAAGTAGAGTAGGTAATCAGTCCAAGAAGAATAT-ATGATACGATTCCTTAG-
------GAGATATACATACTCTTGAACGACATCGATGCTATCAAGTACAGAGCCAGAGCAGGAGGGAGAAGTAGGGCGCT
ACCGAGCTCAACGGATAGGACAGTGCACCACTAACCTGA---------------CGACACCGGAGCCATGGAAGAAGGGC
GGGACGGGAAGGAGGCCAAGTCTGAGAGTTCAGAGGACCGGGGCAC----------------------------------
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------------------------------------------------------------------------GGATCTGC
GTCGTGTGGGGGCTCGTCGTCATGGTCATGGTCTACTCCGTCGGCCACGTCTCCGGGGCGCACTTCAACCCCGCCGTCAC
CATCGCCTTCGCCGCCTGCCGACGCTTCCCGTGGAAGCAGGTAGTTTCAACACAGGGATCTTCATTGGGATGAAATG---
TGATGCGATCAGAAGCACTGTAGATTATCCGAAAAAT------------------------------GTCTGGATGTGTT
GCAGGTGCCGTCCTATGTGCTGGCTCAGGTGCTGGGGTCCACGCTGGCGAGCCTGACGCTGCGGCTGACGTTCGGCGGCG
CGCACGGGCACTTGTCCGGGATGACGCCGTCCGGTTCGAGCACGCAGGGGGTGGCGCTCGAGTTCATCATCTCCTTCTAC
CTCATGTTCGTCGTCTCGGGCGTGGCCACGGACGACAGAGCAGTAAAGACCACCGCTTCACGCCACCCAGCACTTGGAGA
TCG----GAAACGACGAACTTCTGCTGATATGTGATAGCTCT--------------------------------------
-------TGCAGGTTGGTGACTTGGCTGGTCTCGCAGTTGGTGCCACCGTCGTGCTCAACGTGCTCTTTGCCGGGTACAA
GCCGATCTTAAGCATAGACGTGG-----------------------TCTTGATCTTACCTCAAACT----CCTGACATGA
CATGTCGACGTTGCATTCTTCTTCGT-------------GGATGTGCAGGCCGATCACGGGGGCGTCGATGAACCCTGCG
AGGAGCCTAGGGCCGGCGATCGTCGCCTGCCGGTACGGCGGCGTGTGGGTGTACGTCGTCGGCCCGGTGTGCGGGACGGT
GGCGGGAGCCTGGACCTACAACCTCATCTGGCTCCCGTACAAGCCCATCGCCAGGAGCGGGTCGACTGCGTCGTTCCTCA
GACCGCTGTAAGGGATTAAAATTAGGAGATGGAAATTTTGCTTTAATTTGACCCCAGTGGCAATCATATTGTGATGTTAC
ATGGTGAAAAATGTACATCCGCATGGGTCTTTCTACCGA--TAATCCCGGTTCCAATAAATG---CTCCTTTGTTTCCAA
TTTGCCCATGAAATTAGTATCTGGCATCAAAATATAAA-TCAATCTGGACAAGTTTTTCCATGCCTTGTTATCACAACTA
AGAGCATCTCCAGCCGTTGGCCCCCAGGGGGG-CGCCTAAAATCGCCGCCTGGGGGCGAGCTGGCGCAAAAAAG---GGC
CTGGGGGCGAGTTGGTCCCC-AGTTGCGGGCCCCAGGGCCGCCCCC-AGATGCGTATAATTTATT---T--AAAAAAACG
TTCTGTGAAGTTCGGTTAAACACGGCTAAATTTCGGCAAACTTTGACATATATT-GACATGTTCG----GCGG----TAC
ATAGCAAATATAACTAATAAAAGAAATCAATGAACGCCGAGTAGTCGCCGTCGTCGCCGCCATCCTCGCCGCCGTCGTCG
TCGGCGGCCTTCTCCTC---CTTCTTGACGCGGCCGTCCCTGGTGGACCCCTGACCGGCGTCGCCAACGCGGAC---CGG
GGGCGGCGGCG------CATCGTCGTCGTCGCTGTCCTCGATGACGACGACTCCTCCTTCGTCGCGGCCCCGGCGGCGCT
GCTCGAACCGCCACAGGACGGCGCACTGGCGCTCCCTCGCCATCTTCAGGGAATCCTTGCGCGCCCATTCCAGAGCCGCG
TCGTC-TCGTGCTCCACGTCGTCGTGCTTCGTCTTCACGGCGGGGAGATCCGGCTCCGTCTTCACCGGCGCGAGCCCCGG
GTCCGTTTTTGGCTTGATGAAGCGCGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGCGC
TGCGAGTGCGTCGGCCGAGCGGCGTCTCCGCCGCGGGCTCGGTCTTGACGCCGAGCAGCGCCGGAGAGCCGGAGGAGTGG
GAAGAAGAGC
>chr3B_1
CACGTGATTACGAACCGTCCATTCCGCGGTGATCTAACGGCTAGGGGTCTTATGGGATGT-AGGTAATAATGTGACATCT
AAAGTACTCCCTCCATTTTTAAATATAAGACTTTTTAGAGATTTCAATACAGACTACATAGGGA------TGTATATAGA
CATATTTTAGTGTGTAGATTCACTCATTTTAATCCATATGCAATCCGTATTGGAATCTCTATAAAGCCTTATATTTAGGA
ACGGAGGGAGTAAGCTGTAAAAGTATAAGATATGAAACATAATGTATTGTAAACATGTGGCGTTTTGCCCACACATATTG
AAGTTGCTTATAAGTTTTATTTACAGACAATTTGTTTCTAAATTGCTAATTCACATTTCAATTTGTACCACACAACCAAA
ATTTGGTGCCTAAAGTTACATTTTCTCTCTATTTGCTTAGAGATAAAAAAAAAGAGCGGGCTTTTTTGTTTTGTTTCAGT
GTACATTTGAATCTCCATGTACA---------------------------------------------------------
------------------------------------AATGATCAGGATTTTAACAATTGATGCACCTTTGTCAGACAATA
GTTCGTCTTCCATTCATGAACAAACCAACAGATGCAAACTTTTTTTTCCTTTCAAATATTTAGGATGGTACAAGCATGCA
GATCCATTTTAGTTTTGAAGACTAATTATTCATATAACTTTGTGTGGATAGATATAAGAAATAAAAAAAACTTTAT----
-----TTTACTGAAGATGGATTCAGTTTGGCGTGAAATATTGTGCCAAGACTAGACAGACCCTAATTTTTATCATGTTTT
TTGAAACGTTTTTTTTAATCATGTTTAGCCCTTGGTGGTTGAGTTGGTTACGTTTTTGGCTTTTTGCACACGCCTACTTC
AGTG-GTTGCATTAAGCCACATCCAGTCAAGTAAAGTAGGTAATCAGTCCAAGAAGAATAT-ATGGTTCCATG-----G-
------GAGATATACACACTCTTGAAGGACATCAATGCTATCAAGGAGTACAGACCAGGA-GAAGGAGAAGTAGGGT---
AGTGCGCGCAACGGAGAGGACAGTATGCCACTAACCTAAGAGAGACGACGGAGGCGACACCGGAGCCATGGAGGAAGGGC
GAGACGAGAAAGAGGCCACGTCTGAGAATTCAGAAGACCGGGGCAACACTAGTGACAGCAGCAGATGCGACGGCAGCGGC
CTGATGTCCGTCCAATTCATGCAGAAGGTATACA----------TGTGGCTGCAGTATCTGGAGTAGTTCTGTACCGCGT
AGATGCAGCAAATTTTGCTGGAAGAATCGTGCTCATTTGACGCGGGTTTGAGCAGATTCTTGCCGAAATTCTGGGCACCT
ACTTCATGATCTTGGCGGGGTGCGGCGCCGTGGTGGTGAACCAGAGCACGGGCGGCGCGGTGACGTTCCCGGGGATCTGC
GTCGTGTGGGGGCTCGTCGTCATGGTCATGGTCTACTCCGTCGGCCACGTCTCCGGGGCGCACTTCAACCCCGCCGTCAC
CATCGCCTTCGCCACCTGCCGCCGCTTCCCGTGGAAGCAGGTAGTTTCAACACACGGATCTTCATTGCGATGAAATG---
TGATACGATCAGAAACATTGTAGATTATCCGAAAAAT------------------------------ATGTGGGTGTGTT
GCAGGTGCCGTCCTACGTGCTGGCTCAGGTGCTGGGATCCACGCTGGCGAGCCTGACGCTGCGACTGACGTTCGGCGGCG
CGCACGGGCACTCGTTCGGGACGATGCCGTCCGGTTCGAGCACGCAGGCGGTGGCGCTCGAGTTCATCATCTCCTTCTAC
CTCATGTTCGTCGTCTCGGGCGTGGGCACGGACGACAGAGCAGTAA-GACCACCGCTTCACGCCACCCAGCACTTGGAGA
TCG----GAAACGATGAACTTCTGCTGATATGTGATAGCTCC--------------------------------------
-------TGCAGGTTGGTGAGTTGGCTGGTCTCGCAGTTGGTGCCACCGTCGTGCTGAACGTGCTCTTTGCCGGGTACAA
GCCGATCTAAAGCATAGACGTGG-----------------------TCTTGATCTTACCTCAAACT----CCTA-----A
CATGTCGACGTTGCATTCTTCTTCGT-------------GGACGTGCAGGCCGATCACGGGGGCGTCGATGAACTCTGCG
AGGAGCCTAGGGCCGGCGATCGTCGCCTGCCGGTACGGCGGTGTGTGGGTGTACGTCGTCGGCCCGGTGTGCGGGACGGT
GGCGGCAGCCTGGACCTACAACCTCATACGGCTCCCGGACAAGCCGATCGCCAGGAGCGGGTCGACTGCGTCGTTTCTCA
GACCGCTGTAAGGGGTTAAATTTAGGA--TGGAAAATTTGCTTTAA-------CCAGTGGCAATTAGATTGTGATGTTAC
ATGGTGAGAAATGTACATGCGCATGGGTCTTTTCACCGACATAAACCCGATTCCAAGTAAAGTTTCTCCTTTGTTTCCCA
TTTGCCCATGAAATTAGTATCTGGCATCAAAATATAAAATCAATCTGGACAAGTTTTACCATGCCTTGTTATCACAACTA
AGA-----------------------------------------------------------------------------
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>chr3A_772
T-------------------------------------------------------------------------------
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-----------------------------------------------------------------------TTTCT----
-----TTTACTGAAGATGGATTCAGTTAGGCGTGAAAAATTTGTAAGAAGACTACATA----------------------
----------------AATCACGTTTAGCCCTTCGTAGTTGAGTTGGTTACGTTT--------TTGCACACGCCTAATTC
AGATAGTTCCATCAAGCCACCTCCAGTCATGCAGAGTAGGTAACCAGTCCAAGAAGAATATGATGATATGATTCCTAATT
CCTTAAGAGATATACTTACACTCAAACGATCTCGGCGCTATCAAGTAG------AGATCAGGAAGGAGAAGCAGGGTGCC
ACTGTGCTCGACGGAGAGCACAGCGTGTCACTAACATAGGAGAGACGACGGAGGCGCCACCGGAGCCATGGAAGAAGGGC
AAGACGTAAAGGAGGCCACGTCTAAGAACTCAGAGGATTGGGGCAGCACTAATAACAACAGCAGATGCGACGGCGGTGAC
ATGATCTCCGTCCAATTCATGCAGAAGGTATATACTCCTATATGTGTGCTTGCAGTATGC-----AGTTCTGTACTGCGT
AGAACG----AATTTTGCTGGAAGAGTCGTGCTCGTTTTACGCAGATTTGAACAGATCCTTGCAGAAATTTTGGGAACCT
ACTTCATGATCTTGGCGGGGTGCGGCTCCGTGGTGGTGAACCAGAGCACGGGCGGCGCGGTGACGTTCCCGGGGATCTGC
GTCGTGTGGGGGCTCGTCGTCATGGTCATGGTCTACTCCGTCGGCCACGTCTCCGGCGCGCACTTCAACCCCGCCGTCAC
CATCGCCTTCGCCACCTGCCGGCGCTTCCCGTGGAAGCAGGTACTTTCAACACAGGGATGTTCGTTGGGATGAAAAAACA
TGATGTGATCAGAAACACTGTAGATTATCCGAAAATGCCACTTTTTCAGTGTATTGACAAACTGAAAATGTGGATGTGTT
GCAGGTGCCGTCCTATGTGCTGGCTCAGGTGCTGGGATCCACGCTGGCGAGCCTGACGCTGCGGCTGACGTTCGGCGGCG
CACACGGGCACTTCCTCGGGACGACGCCGTCCGGTTCGAGCACGCAGGCGGTGGCGCTCGAGTTCATCATCTCCTTCTAC
CTCATGTTCGTCGTCTCAGGCGTGGCCACGGACGACAGAGCGGTAA-GACCACCGCTTCGCGCCGCCCAGCACTTGGAGA
TCGATCGGAAACGATGAACTTTTCCTGATATGCGATAGCTCTGGAATGTCAGAGAGGGAGTATGAAGAACTGAGTGACGC
TTTCTCTTGCAGGTTGGTGAACTGGCTGGTCTCGCAGTCGGTGCCACCGTCGTGCTGAACGTGCTCTTTGCCGGGTACAG
GCCGATCCAAAGCATCATATATGGCAAATAAACTGAAATTGTAGATTCTTGATCTTCTTACCCCTGACCCCCTGACCTGA
TCTGTGGATGTTGCATTCTGCTTCTTGCTTCTTCGGAGCGGATGCGCAGGCCGATTACGGGGGCGTCAATGAACCCTGCG
AGGAGCCTAGGGCCGGCGATCGTCGCCTGCCAGTTCGGCAGCGTGTGGGTGTACATCGTCGGCCCGGTGTGCGGGACGGT
GGCGGGAGCCTGGACCTACAACCTCATCCGGCTCCC--------------------------------------------
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>chr7D_2234
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----------------------------------------------------------------------------ACTA
AGAGCATCTCCAGCCGTTGGCCCCTCA-GGGG-CGCCTAAAATCGCCGCCTGGGGG-GAGCCGGCGCAAAAAAAAACGGC
CTGGGGGCGAGTTGGTCCCCAAGTCGCCAGCCCCAGGGCCGCCCCC-AGACGCGTCTAAATTTTT---TCAAAAAAAACG
TTCGGCGAAGTTCGGCTAAACACGTCTAAATTTCGGCAAACTTTGGCATATATTAGACATGTT-----CGCGG----TAC
ATAGTAAAGAAATCTAAAACAAGAACTCGCTGAACGCGGAGTAGTCGCCGTCGTCGCCGCCATCCTCGCCGCCGTCGTCG
TCGCCGGCCTTCTCCTC---CTT---GACGCGGCCGTCCCTGGTGGACCCCTGCCCGGCGTCGCCAAGGCGGACTGGTGG
CGGCGGCGGCG------CGTCGTCGTCGTCGCTGTCGTCGAGGACGACGACTCCTCCTTCGTCGCGGCCCCGGCGGCGCT
GCTCGAAGCGCCGTAGGGCGGCGCACTGGCGCTCCCTCTCCATCTTCAGGAAGTCCTTGCGCGCCCATTCCAGGGCCGCC
TCGTCGTCGAGCTCCACGTCGCCGTGTTCCGGCTTCACGGTGGGGAGACCCGGCTCCGTTTTCACCGGCGCGAGCCCCGA
CTCCGTCTTTGGCTTGACGAAGCGCGGAAGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGCCGC
TGCGAGTGCGCCGGCCGAGCGGTGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGAGCCGGAGGAGTGG
GAAGAAGA--
>chr2D_2234
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----------------------------------------------------------------------------ACTA
AGAGCATCTCCAGCCGTTGGCCTCCAGGGG---CGTCTAAAATCGCCGCCTGGGGGCGAGCCTGCGCAAAAAAA--CGGC
CTGGGGGCAAGTTGGTCCCC-AGTCGCCGGCCCCAGGGCCGCCCCCCAGACGCGTCTAAATTAA------AAAAAAAACG
TTCGGCGAAGTTCGACTAAACACGTCTAAATTTCGGCAAACTTTGGCATATATTAGACATGTT-----CGCGG----TAC
ATAGTAAAGAAATCTAAAATAAGAACTCGTTGAACGCGGAGTAGTCGTCGTCGTAGCCGCCATCCTCGCCGCCGTCGTCG
TCGGCGGCCTTCTCCTC---CTT---GACGCGGTCGTCCCTGGTGGACCCCTGCCCGGCGTCGCCAAGGCGGACTGGTGG
CGGCGGCGGCG------CGTCGTCG------CTATCTTCGATGACGACGACTCCTCCTTCGTCGCGGCCCCGACGGCGCT
GCTCGAACCGCCGCAGGACGGCGCACTGGCGCTCCCTCGCCATCTTCAGGAAGTCCTTACGCGCCCATTCCAGGGTCGCG
TCGTCGTCGAGCTCCACGTCGCCGTGCTCCGTCTTCACGGCGGGGAGACCCGGCTCCGTTTTCACAAGCGCGAGCCCCGG
CTCCGTCTTTGGCTTGACGAAGCGCGGAGGAGCCGACGAGGAGGCGCGCCCTCCGCCCTCGTTGATGACGATGCCGGCGC
TGCGAGTGCGTCGGCCGAGCGGCGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGAGCCGGAGGAGTGG
GAAGAAGAG-
>chr4D_2235
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-----------------------------------------------------------------------------CTA
AGAGCATCTCCAGCCATTGGCCCCACA-GGGGACGCCTAAAATCGCCGCCTGGGGC-GAGCCGTCGCAAAAAAA---GGG
CCTGGGGCGAGTTGGTCCCC-AGTCGCCGGCCCCAGGGCCGCCCCC-AGATGCGTATAATTTATT---A--AAAAAAACG
TTCGGCGAAGTTCGGTTAAACACGGCTAAATTTCGACAAACTTTGGCATATATT-GACATGTTCG----GCGG----TAC
ATAGCAAATATAACTAATAAAAGAAATCGATGAACGCCGAGTAGTCGCCGTCGTCACCGCCATCCTCGCCGCCGTCGTCG
TCGGCGGCCTTCTCCTCCTTCTT---GACGCGGCCGTCCCTGGTGGACCCCTGACCGGCGTCGCCAACGCGGACTGGTGG
CGGCGGCG---CGTCGTCGTCGTCG------CTGTCCTCGATGATGACGACTCCTCCTTCGTCGCGGCCCCGGCGGCGCT
GCTCGAACCGCCGCAGGGCGGCGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTCCTTGCGCGCCCATTCCAGAGCCGCC
TCGTCGTTGTGCTCCACGTCGTCGTGCTCCGTCTTCACGGCGGGGAGACCCGGCTCCGTCTTCACCGGCGCGAGCCCCGG
CTCCGTCTTTGGTTTGACGAAGCGCGGAGGAGCCGACGAGGAGGCACGCCGGCCGCCCTCGTTGATGACGATGCCGGCGC
TGCGAGTGCACCGGCCGAACGGCGTCTCCGCCGCGGGCTCGGTCTTGACGCCGAGCAGCGCCGGAGAGCCGGAGGAGTGG
GAAGAAGAGC
>chr5D_2236
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------------------------------------------------------------------------------TA
AGAGCATCTCCAGCCGTTGGCCCCCCA-GGGG-CGCCTAAAATTGCCGCCTGGGGC-GAGTCGGCGCAAAAAAA---GGC
CTGTGGGCGAGTTGGTTCCC-AGTCGCCGGCCCCAGGGCCGCCCCC-AGATGCGTCTAATTTTTTC--A--AAAAAAACG
TTCGGCGAAGTTCGGTTAAACACGACTAAATTTCGACAAACTTTGGCATATATT-GACATGTTCGCGACGCGG----TAC
ATAGAAAATATAACTAAAAAAAGAAATCGCTGCACGCCGAGTAGTCGTCGTCGTCGCCACCATCCTCGCCACCGCCGTCG
TCGTCGGCCTCCTCCTC---CTT---GACGCGGCCGTCCCTGGTGGACCCCTGACCGGCGTCGCCAACGCGGACTGGTGG
CGGCGGCGGCACGTCGTCGTCGTCG------CTGTCTTCGATGACGACGACTCCTCCTTCGTCGCGGCCCCGGCGGCGCT
GCTCGAACCGCCGTAGGGCGCCGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTCCTTGCACGCCCATTCCAGGGCCGCG
TCGTCATCGAGCTCCACGTCGCCGTGCTCCGTCTTCACGGCGGGGAGACCCGGCTCCGTTTTCACCGGCGCGAGCCCCGG
CTCTGTCTTTGTCTTGACGAAGCGCGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGCGC
TGCGAGTGCGCCGGCCGAGCGGCGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGAGCCGGAGGAGTGG
GAAGAAG---
>chr2D_2236
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------------------------------------------------------------------------------TA
AGAGCATCTCCAGCCGTTGGCCCCCAGGGGGT--GCCTAAAATCGCCGCCTGGGGGCCAGCCGGCGCAAAAAAG---GGC
CTGGGGGCGAGTTGGTCCCC-AGTCGCCGGCCCCAGGGCCGCCCCC-AGATGCGCATAAATTAG----A--AAAAAAAAG
TTCGGC-AAATTCGTTTAAATACGACTAAATTTCGGCCAAATTTGGCATATATT-GACATGTTCG----GCGG----TAC
ATAGCAAATATAACTAAAACCAAAAATCGC-GAACGCCGAGTAGTCGCCGTCGTCGCCGCCATCCTCGCCGCCGTCGTCG
TCGGCAGCCTTCTCCTC---CTT---GACGCGGCCGTCCCTGGTGGACCCCTGACCGGCGTCCCCAACGCGGACTGGTGG
CGGCGGCG---CGTCTTCTTCATCG------TTGTCCTCGATGACGACTCCTCCTCCTTCGTCGCGGCCCCGGCGACGCT
GCTCGAACCGCGCCAGGGCGACGCGCTGGCGCTCCCTCGCCATCTTCAGGGAGTCCTTGCGCGCCCATTCCAGGGCCGCG
TCGTCGTCGAGCTCCACGTCGCCGTGCTCCGTCTTCATGACGGGGAGACCCGGATCCGTCTTCACCGGCGCGAGCCCCGG
CTTCGTATTTGGCTTGACGAAGCGCGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGCGC
TGCGCGTGCGCCGGCCGAGCGGCGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCCGCGGAGAGCCGGAGGAGTGG
GAAGAAG---
>chr5D_2237
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-------------------------------------------------------------------------------A
AGAGCATCTCCAGCCATTGGCCCCCCA-GGGGGCGCCTAAAATCGCCGCCTGGGGGCGAGCCGGCGCAAAAAAG---GGC
CTCGGGGCGAGTTGGTCCCC-AGTCGGCGGCCCCAGGGCCGCCCCC-TGACGCGTCTAATTTTTTTAAA--AAAAAAACG
TTCGGCGAAGTTCGGCTAAACACGTCTAAATTTTGGCAAACTTTGGCATATATTAGACATGTT-----CGCGGCTTATAC
ATAGCAAATATATCTAA-AAAAGAACTCGCTGAACGCGGAGTAGTCGCCGTCGTCGCCGCCATCCTCGCCGCCGTCGTCG
TCGGCGGCCTTCTCCTC---CTT---GACGCGGCCGTCCCTGGTGGACCCCTGCCCGGCGTCGCCATGGCGGACTGGTGG
CGGCGGCGGCGCGTCGTCGTCGTCG------CTGTCGTTGAGGACGACGACTCCTCCTTCGTCGCGGCCCCGGCGGCGCT
GCTCGAAGCGCCGCGGGGCGGCGCACTGGCGCTCCCTCTCCATCTTCAGGAAGTCCTTGCGCGCCCATTTCAGGGCCGCC
TCGTCGTCGACCTCCACATCGCCGTGTTCCGTCTTCACGGCGGGGAGACCCGGCTCCGTTTTCACCGGCGCGAGCCCCGG
CTCGGTCTTTGGCTTGACGAAGCGCGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGCGC
TGCGAGTGCGCCGGCCGAGCGGCGTCCCCGCCGCGGGCTCAGCCTTGACGCCGAGCAGCGCCGGAGAGCCGAAGGAGTGG
GAAGAAGA--
>chr1A_2237
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-------------------------------------------------------------------------------A
AGAGCATCTCCAGCCGTTGTCCCCCAGGG--T--GCCTAAAATCGTCGTCTGGAGGCGAGCTGGTGAAAAAAAA---ATT
CTGAAGGCGAGTTGGTTCTC-AGTCGCCGACCCGATGGCCGCCCCC-AGATGCGTATAATTTATT---G--AAAAAAAAG
TTCAGCGAATTTCGGTTAAACACGGCTAAATTTTGGAAAAC-TTGGCATATATT-GACATGCTCG----GCAG----TAC
ATAGCAAATATAACTAATAAGAGAAATCGATGAACGCCGAGTAGTCGCCGTCGTCGCCGCCATCCTTGCCGCCGTCGGCG
GCGGCCTTCTCCTCCTC---CTT---GACGCGGTCGTCCCTGGTGGACCCCTGACCGGCGTCGCCAACGCGGACAGGTGG
CGGCGGCG---CGTCGTCGTCGTCG------CTGTCCTCGATGACGACGACTCCTTCTTTATCGCGGCCCCGGCGGCGCT
GCTCGAACCGCCGCAAGGCGGTGCACTAGCGCTCCCTCGTCATCTTCAGGGAGTTCTTGCGCGCCCATTCCAAAGCCGCG
TCGTCGTCGTGCTCCACGTCGTCGTGCTCCGTCTTCACGGCGGGGAGACCCCGCTCCGTCTTCACCAGCGCGAGCCCCGA
CTCCGTTTTTGGCTTGACGAAGCGCGGAGGAGCCGACGAGGAGGCGTGCCGACCGCCCTCGTTTATAACGATGCCGGCGC
TGTGAGTGCGCCGGCCGAGCGGCGTCTCCGCCGCGGGCTCGGTCTTGACGCCGAGCAGCGCCGGAGAGCCGAAGGAGTGG
GAAGAAGAGC
>chr7D_2238
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AGAGCATCTCCGGCCGTTGGCCCCACA-GGGGGCGCCTAAAATTGCCACCTGGGGGCGAGCCGGCGCAAAAAAA---GGG
CCTGGGGCGAGTTGGTCCCC-GGTCGCCGGCCCCAGGGCCGCCCCC-AGATGCGTAATTTTTTTT--------TAAAAGG
TTCGGCGGAGTTCGGTTAAACACGGCTAAATTTCGATAAACTTTGGCATATATT-GACATGTTCG----GCGG----TAC
ATAGCAAATATAACTAAAAAAAGAAAACGCTGAACGCCGAGTAGTCACCGTCGTCGCCGCCATCCTCGCCGCCGTCATCG
TCGTCGGCCTTCTCCTC---CTT---AACGCGGCCGTCCTTGGTGGACCCCTGACCGGCGTCGCCAACGCGGACTGGCGG
CGGCGGCG---CGTCGTCATCGTCG------CTGTCCTCGATGACGACGACTCCTCCTTCGTCGCGGCCCCGGTGGCGCT
GCTCGAACCGCCGCAGGGCGACGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTCCTTGTGCGCCCATTCCAGGGCCGCA
TCGTCGTCGAGCTCCACGTCGTCGTGCTCCGTCTTCACGGCGGGGAGACCCGGCTCCGTCTTCACCGGCGTGAGCCCCGG
CTCCGTCTTTGGCTTGACGAAGCGCGGAGGAGCCGACAAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGCGC
TGCGAGTGCGCCGGCCGAGCGGCGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGAGCCGGAGGAGTGG
GAAGAAGAG-
>chr7B_2238
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AGAGCATCTCCAGCCGTTGGCCCCCCA-GGGGGCGCCTAAAATCGTCGCCTGGGGGCGAGCCGGCGCAAAAAAAA--GGC
ATGTGGGGGAGTTGGTCCCC-AGTCGCCGGCCCCTGGGCCGCCCCC-AGATGCGCATAG-TTTTTCAAA--AATAAAACG
TTCGGCGAAGTTCGGTTAAACACGGCTAAATTTCGGCAAACATTGGCATATATT-GACATGTTCG----GCGG----TAC
ATAGCAAAATGTAAC--TAAAAAGAATCCATGAACGCCGAGTAGTCACCGTCGTCGCCGCCATCCTCGCCG---CCGTCG
GCGGCGGCCTTCTCCTC---CTT---GACGCGGCCGTCCCTGGTGGACCCCTGACCGGCGTCGCCAACGCGGACTGGTGG
CACCGGCG---CGTCGTCGTCGTCG------CTGTCCTCGATGACGACGACTCCTCCTTCGTCGCGGCCCCGGCGGCGCT
GCTCGAACCGCCGCAGGGAGGCGCACTGGCGCTCCCTTGCCATCTTCAGGGAGTCTTTGTGCGCCCATTCCAGGACCGCG
TCATCGTCGAGCTCCACGTCACCGTGCTCCGTCTTCACGGTGGGGAGACCCGGCTCCGTCTTCACCGGCACTAGCCTCGG
CTCCATCTTTGGTTTGACGAAGCGCGGAGGAGCCGACGAGGAGGCGCGCCGACCGTCCTCGTTGATGACGATACCGGCCC
TGCGAGTGCGCCAGCCGAGCGGCGTCTCCGCCGCGGGCTCGGCCTTGACGTCGAGCAGCGCCGGAGAGCCGGAGGAGTGG
GAAGAA----
>SNPs
----S---S-S-----S-------S--------S-S---S----------------S---S-------------------
----------S--SS---S--------------------S-----S-------S------S-SSSSSSSS----------
----------S---------------S---SS-SSS------S---S----S------S--S------------S-----
--------------S------------------------------------------S----------------------
----S-S-------------S------S----S----------------S----------S---S---------------
--------SS----------S-------------S-------S--------S--SSSSSSS--S--SSS---S--SSSSS
SSSSS--SSSSSS-SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--------S-----S--S---S-----------
--------S-SS-------S-----------S------------------------SS--------S------S----S-
----------------------------------S--------------SS-----------SS-----S--S-SSSSSS
SSSSS-------------S-------------------S---------------------S--------S----------
-----------------------S--------S-----------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------------------SSSSSSS---------S------------S--S
--S-S----------S---------SS----------S------------------------------------------
-S----S-----------S--------S-----------------S----------------------------------
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-------------S-------S----------------------------------------------------------
--------------S----------------------------------------------------S-S----------
------------------------------------S-------------------------------------------
---------------S-----S--------------------------S-------------------------------
----------------------------------------------S---------------------------------
--------------S-----------------------------------------------------------------
--------------------S-----------------------------------S-----------------------
--------S-------------------------------------------------------------------S---
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----------------------------S--------S-------S-----------------------------S----
--------------S-----S------SS------S----------SSSSSSS-----------S-S-------------
-------S----------S-------------SS----------S----S------SS--S-----------------S-
---------------------------------------------------------S----------------------
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------------------------S--S----------------------------------------------------
---S-S---------------------------------------S----------------------------------
----------------------------S---------------------------------------------------
-----------------------SSS------------------------------------------------------
S-------------------------------------------------------------------------------
------------S---------------------------------------S---------------------------
----------------------------S-------------------S-------------------------------
S----------------S--------------------------------------------------------------
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>forward_535
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-----------------------------------TGGATCACACGTGCATGACT-------------------------
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>reverse_2527
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----------------------------------------------TTTGACCCCAGTGGCAATCA--------------
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