>input_sequence_63083
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-ATGCTACTGTTTGGAAGAAAAGGACTGCTTCCTGCAGTGTCAGGCTGTGTGATTCTCTTGCTTGCAAGCTCGATCCATG
GCGCTTCAGATAGCCTGGAGGGTCTGAACCAAAGCTACAAGAGCGTTCAGCCATTGGAGGTAAACAAAAAGCTGTCAAGT
T----TTCTCTCCCCTGTAAATAAGTTTCAGAGACTCTTTCCATGCTCCTATGAAACTTTGGATGCAAGAATCTGAATGT
GTCATTGCACAACTGCTATCACTGACTAACATAAAACTTACACTTGGATGAACTGTTG--TTTTTGCAGCTGACGCCCAA
GCTGTCGCTGCAGCTCAAGCTCCACGCCTTCCTCCTCTGGTCCTCCGTCGGCTTCCTCATGCCGATCGGCGTGCTGCTGA
TCAGGTTCTCGAGCAACGTGAAGAGCGCCAAGGCCGTCAGGGTCCTCTTCTACTGCCACGTCGCCGCGCAGGTCGCCGGC
GTGGCCCTGGCCACCGCCGCCGCGGCGCTGTCGATCACCAACTTCCAGAACGCCTTCAACAACACCCACCAGCGGATCGG
GGTCGCCCTCTACGGCCTCGTCTGGCTCCAGCCGCTCATCGGCTTCCTCAGACCCGACAGGTATGGCGGATACATG----
GACGAACACCTTGAATTTCCTCATGAA-----------------------------------------------------
-------TTCGTGATGTTTGCTGAC---------TGATCTCTTGTTGTACT---TCAGGGGCG---------TGAAGGCG
AGGAGCGTGTGGTACCTGGCGCACTGGCTGCTGGGGG-TGGTGGTGTGCGTCGTCGGGGTGGCCAACGTCTACATCGGCC
TCCACACGTACCGGGAGAGGACCGGCAGGAGCGTCGGGCTCTGGACGGCGCTCCTCACCGCCGAGGTCTCCGCCGTGGCG
CTCGTCTACCTCCTCCAGGACAGGTGGAACCACGTCATCCGGCAAGAAGAGGCGGCCGCTGGCGACGAGCGGCGGTCGGA
GACGGAGACGTCGGAGGAG---CCGTCGTACCCGGCCAACGACCACAAGGAGGTGGCCGTGATGCCGTAG----------
--------------------------------------------------------------------------------
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-------------------
>chr1D_1_TraesCS1D01G407600
ATTCACAAAAATCAAAATGAACACAAAACTAAAGCAAAAGAAAAATGCAATGGCACAAACAAAAGCAGCAGATGCCTTTG
CTCTGAGTTGTGCTGATCTTGATCAAAAGACACGATCAACTTTGCCAAACAACCTCAATGGCGCAGTTGAACAACGCCCA
GCTTTCTCCGAGACCGCTTTCTTTCTTTCCGCAAAGAAAAAAAAGGATAAAATCCCTCG-CTAGATGCCGATGCAGCATC
CAACAATATCTCGCTGCTTGGGTGCTTCCTGCAGCTCCACCACCACCACCACCACCACAAAAGCCACCCTTCCACTCCAT
--------ACCCTCGGAGCTGTAAAAGCACAACCGAGCCAAAAATGTGCTCAAAAGCACGCCCAACCCTGCTCACATCCC
ATCTTATTCCATCCCA-TTCCCCAGAAGTCCACCATGCTAA-----------------GCGGCAAAAGCGGCCTCTGATG
CCCAAATCATTTCATCCGGCTTGCTAAAGGAGGGGGATAGGTGGTAGCTAGCATAGGACGCCCCTCCCAAGTTATCCTCT
TGGACCGGCTAAATCTTGCGTTCCTGAACTTGCAAAGCCAGATTCTTGCATTCCCCCGCAAGCTTCTTCGGTCGC----C
GCATCGCGCCGAGGGTTGGCGCGGTTCGCCGGCGTTGATTGGTCTCTGCACATTGTTTA------------AGCTCAGCC
A-GGTTTCTTTTTCTCTTGTTCAAATGCCCTG---GTATTTAAGGTGAGGGGGAGCTTTGCAAGAAAGGAATGGCTTGGA
TGGGTTT----AGTAGCATGAGGTGGTAGC-GG-GAGAGAGCAGAGCCCAGAAGCTTGCCCTGTTCATTCA---TCACCT
TCTCCTTCAGCCATTGCTGGCTGGTGTAGGCGCGTC--------------------------------------------
----------------GATCCATCTTGCTTTGGTTTGATCTTTTGCTGCTCAAGAA-----GTCCACTTTGGTTCAGTTC
AGTTGCTTGCCATTTTCGATCTTCTTGGAGTTGCTTGCTCTGTTCCTGCTAAGGGCAGATTTGATAAATAAAAAAGCATC
AATGCTACTGTTTGGAAGAAAAGGACTGCTTCCTGCAGTGTCAGGCTGTGTGATTCTCTTGCTTGCAAGCTCGATCCATG
GCGCTTCAGATAGCCTGGAGGGTCTGAACCAAAGCTACAAGAGCGTTCAGCCATTGGAGGTAAACAAAAAGCTGTCAAGT
T----TTCTCTCCCCTGTAAATAAGTTTCAGAGACTCTTTCCATGCTCCTATGAAACTTTGGATGCAAGAATCTGAATGT
GTCATTGCACAACTGCTATCACTGACTAACATAAAACTTACACTTGGATGAACTGTTG--TTTTTGCAGCTGACGCCCAA
GCTGTCGCTGCAGCTCAAGCTCCACGCCTTCCTCCTCTGGTCCTCCGTCGGCTTCCTCATGCCGATCGGCGTGCTGCTGA
TCAGGTTCTCGAGCAACGTGAAGAGCGCCAAGGCCGTCAGGGTCCTCTTCTACTGCCACGTCGCCGCGCAGGTCGCCGGC
GTGGCCCTGGCCACCGCCGCCGCGGCGCTGTCGATCACCAACTTCCAGAACGCCTTCAACAACACCCACCAGCGGATCGG
GGTCGCCCTCTACGGCCTCGTCTGGCTCCAGCCGCTCATCGGCTTCCTCAGACCCGACAGGTATGGCGGATACATG----
GACGAACACCTTGAATTTCCTCATGAA-----------------------------------------------------
-------TTCGTGATGTTTGCTGAC---------TGATCTCTTGTTGTACT---TCAGGGGCG---------TGAAGGCG
AGGAGCGTGTGGTACCTGGCGCACTGGCTGCTGGGGG-TGGTGGTGTGCGTCGTCGGGGTGGCCAACGTCTACATCGGCC
TCCACACGTACCGGGAGAGGACCGGCAGGAGCGTCGGGCTCTGGACGGCGCTCCTCACCGCCGAGGTCTCCGCCGTGGCG
CTCGTCTACCTCCTCCAGGACAGGTGGAACCACGTCATCCGGCAAGAAGAGGCGGCCGCTGGCGACGAGCGGCGGTCGGA
GACGGAGACGTCGGAGGAG---CCGTCGTACCCGGCCAACGACCACAAGGAGGTGGCCGTGATGCCGTAGCATGACCATG
GGAGCTCGCTCGCTTGGGC--AAACGCAACACCGATTCTGTACAGTTCATGTGTGCTTGGGATTGC------GTCTTGGT
AACTTGTTAGCTGAAGCTGCAGATTGAACAGCTTTTCAGTGAGAGTAGATACAATACAACTCTCGGTGTTGCATTTTCCC
TGGCCGGGGATTGCATGATCAATTAACATGAGATTTACGTACACACAGTACCAATACAGTGAGACATTCCAGGAACAACA
GTCACAGTATCAAACCTATCCGCCGCGGCAAGCAAGTGTCGCAGCCACGTAACCTCAGCGCCGACTTCCCCTGCCACCT-
---------CCATCTTGGGCATCGAGTCGGTGTAGACGAAATCGAGCAAGGCGTTGAACACATTCGGCTCCATGTCTTGT
ATCTGTATGGCAC-TGGCTGTAGCAATCCCCTCCTTCATGGGACCAAAGAGGGAGGTTCATCGCAAGTTGGCAACTTGAG
CATGAAACAACCTGACGTTCAAGG----------GCTACTTATTTGCTAGCTACAGGATGACAATGCAGACCAAGAAAGA
GACCAACATGCCAAAGATAGTAGGCAGATAAGCAGCAACATGGTTTTGAGA----TCATTCATCCACAGTAGCAGCAATC
CTC-TTGTGCAGATAACAGCTAGCTTCCATAGTAGTAGTAGTGACGACCACAATAAGTTCATACAGGTACTGATGCACTC
CACTTACACAGAGTAACCAAGTTCAGATAATTTATACTAACGCATTCCCGGCTTGCAGAATAACCACAGAACTAC-----
-----------------------------AACAACAACAACCATAGCATGGTCAGATAACCTACAGGGAGCAGCTTGCAT
AGCGATAACGGGC-GGCTAACAGTATAACAACCTCTCAACGGTCCTGAGGGAAGAGCCATGCTGCCAGATACATCTCAGC
GCACCGCTTCCAGGAAATATTTGGATCACCGGAACCGATGCTGCGGAATCTCATGGAATAGACGCCGAAAGAAGTCTTCT
CCTCATCATAGGCATAGTC
>chr1A_1
ATCCAGAAAAATTAAAATGAAGACAAAACTAAAGCAAA---AAAATGCCATGGCACAAACAAGAGCAGCAGATACCTTTG
CTCCGAGTTGTGCTGATCCTGATCAAAAGACAGGATCAACTTTGCCAAACAAACTCAATGGCACAGTTGAACAAGACCCA
GCCTTTTTCCAAAT-------TTGCTTTCTGCAAAGAAAAATT-----------CCTCG-CTAGATGCCGATGCAGCATC
CAACAATATCTCGCTGTTTGGGTGCTTCCTGCAGCT------CCACCACCACCACCACAAAAGCCACCCTTCCACTCCAT
CATATCATACCCTCAGAGCTGTAAAAGCACAGCCGAGCCAAAAATGTGCTCAAAAGCACGCCCAGCCCTTCTCATACCCC
ATCTTATTCCATCCCA-TTCCCCAGAAGTCCACCATGCTAA-----------------GCGGCAAAAGCGGCCTCTGATG
CCCAAATCATTTCATCCGGCTGGCTAAAGGAGA--GATAAGTGGTAGCTAGCATAGGACGCCCCTCCCAAGTTATCCTCT
----------------TGCATTCCTCAACTTGCTC-GCCGGATTCTTGCATTCCCCCGCAAGCTTCTTCAGTCGC----C
GCATCGCGCCGAGGGCTG--GCGGTTCGCCGGCGCTGATTGGTCTCTGCGCATTGTTTA------------AGCTCAGCC
A-GGTTTCTTTTTCTCTTGTTCGAATG--CTG---GTATTTAAGGTGAGGGGGAGCTTTGCAAGAAAGGAATGGCTTGGA
TGGGTTT----AGTAGCATGAGGTGGTAGTGGGAGAGAGAGCAGAGACTAGAAGCTTGCCCTGTCCATTCA---TC---T
TCTCCTTCTGCCATTGCCGGCATACGTAGGCGCGTC--------------------------------------------
----------------GATCAATCTTGCTTCGGTTTGATCTTTTGCTGCTCAAGAGGTTCAGTTCA--------------
-GTTGCTTGCTCTTT---ATCTTCTTGGAAGTGCTTGCTCTGTTCCTGCTGAGGGCAGATTTGATAGAC----AAGCATC
AATGCTACTGTTTGGAAGAAAAAGACTGCTCCCTGCAGTGTCTGGCTGTGTGATTCTCTTGCTTGCAAGCTCAATCCATG
GCGCTTCAGATAGCCTGGAGGGTCTGAACCACAGCTACAAGAGCGTTCAGCCATTGGAGGTAAATAAAAAGTTGTCAAGT
T----TTCTCTCCCCTGTAAATAAGTTTCAGAGACTCTTTCCATGCTCCTATGAAACTTTTGATGCAAGAATCTGAATGT
GTCATTGCACAACTGCTATCACTGACTAACAGAAAACTTACACTGGGATGAGCTGCTGTTTTTTTGCAGCTGACGCCCAA
ACTGTCGCTGCAGCTCAAGCTCCACGCCTTCCTCCTCTGGTCGTCCGTCGGCTTCCTGATGCCGATCGGCGTGCTGCTGA
TCAGGTTCTCGAGCAACGTGAAGAGCGCCAAGGCCGTCAGGGTCCTCTTCTACTGCCACGTCGCCGCGCAGGTCGCCGGC
GTGGCCCTGGCCACCGCCGCGGCGGCGCTGTCGATCACCAACTTCGAGAACGCGTTCAACAACACCCACCAGCGGATCGG
GGTCGCCCTCTACGGCCTCGTCTGGCTCCAGCCGCTCATCGGCTTCCTCAGGCCCGACAGGTACGAACATATTGT-----
-----------------CACGCATAGATTCTGTCA-----------------------GAAATTTGTGTGTTTCCCGACT
GAA---------------------TGAAGGTTTGTGATGTCTTGTT---CT---TCAGGGGCG---------TGAAGGCT
CGGAGCGTGTGGTACCTGGCGCACTGGCTGCTGGGGG-TGGTGGTGTGCGTCGCCGGGGTGGCCAACGTCTACATCGGCC
TCCACACGTACCGGGAGAGGACGGGGAGGAGCGTCGGGCTCTGGACGGCGCTCCTCACCGCCGAGGTCTCCGCCGTGGCG
CTCGCCTACCTCCTCCAGGACAGGTGGAACCACATCGTCCGGCAAGAAGAGGCGGCCACTGGCGAGGAGCGGCGGTCGGA
GACGGAGACGTC---------------GTACCCGGCCAACGACCACAAGGAGGTGGCCGTGATGCCGTAGCATGGCGATA
TATGGGAGCTTCGCTTGGGCAAAACGCAACACCGATTCTGTACAGTTCATGTGT--------------------CTTGGT
AACTTGTTAGCTGAAGCTGCAGATTGAACAGCTTTTCAGTGAGAGTAGATAGAAAATAACTCTCGCTGGTGCAT------
--------------------------------------------------------------------------------
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-------------------
>chr1B_3
--TCAGAAAACATAAAAGGAACACAAAACTAAAGCAA----AAAATGCCATGACAAAAACAAAAGCAGCAGATGCCTTTG
CGCCGAGTTGCGCTGATCTTGATCAAAAGACACGATCAACTTTGCCAAACAAACTCAATGGCGCAGTTGAACAACACCCA
GCTTTTTTCCAAAT-------TTGCTTTCTGCAAAGAAAAATT-----------CCTCA-CTAGATGCCGATGCAGCATC
CAACAATATCTCGCTGTTTGGGTGCTTCCTGCAGCTC---CACCACCACCACCACCACAAAAGCCACCCTTCCACTCCAT
CATATCATACCCTCAGAGCTGTAAAAGGCCA--------AAAAATGTGCTCAAAAGCACGCCCAGCCCTGCTCATATCCC
ATCTTATTCCATCCCAATTCCCCAGAAGTCCACCGTGCTACACCACGGTTGCTGCTAGGCGGCAAAAGCGGCCTCTGATG
CCCAAATCATTTCATCCGGCTTGCTAAAGGAGA--GATAGGTGGTAGCTAGCATAGGACGCCCCTCCCAAGTTATCCTCT
TGGACCGGCTAAATCTTGCGTTCCTGAACTTGCAAGT-CAGATTCTTGCATTCCCCCGCAAGTTTCTTCGGTCGGTCGTC
GCATCACGCCGAGGGTTG--GCGGTTCGCCGGCGTCGATTGGTCTCTGC-----------GCGCATTGTTTAGTTCAGTC
TTGGTTTCTTTTTCTCTTGTTCAAATGCCCTG---GTATTTAAGGTGAGGGGGAGCTTTGCAAGAAAGGAATGGCTTGGA
TGGGTTT----AGTAGCATGAGGTGGTAGCGGGAGAGAGAGCAGAGACTTGAAGCTTGTCCTGTTCATTCATCTTC---T
TCTCCTTCTGCCATTGCTGGCGTACGTACGCGCGTCTTGTTTTTTCTGTTCAAAGGTTCAGTTCAGTTGCTTGTTCCTTC
TTCCATTGCTGGCATCGATCGATCTTTTTTCGGTTTCATCTTTTGCTGCTCAAGAG-----GTCCA--------------
-GTTGCTTGCTCTTTTCGATCTTCTTGGAGGTGTTTGTTCTTGCCGAGGTCCGAGTGAGACTGAATCAGC----AGCATC
AATGCTACTGTTTGGAAGACAAAGACTGCTTCCTGCAGTGTCAGGATTTGTGATTCTCTTGCTTGCAAGCTCAATCCATG
GCGCTTCAGATAGCCTCGAGGGTCTGAACCAAAGCTACAAGATCGTTCAGCCATTGGAGGTAAAATG---ATTGTGAAGT
TCTCCTTTTCTCCCCTGTCAGTAAGTTTCAGAGATTCTTTC----------------------TGCAAGAATCTGGCTGA
CTGC-----------------------------AAACTTACACTTGGATGAACTGCTCTTTTTTTGCAGCTGACGCCCAA
GCTGTCGCTGCAGCTCAAGCTCCACGCCTTCCTGCTCTGGTCGTCCGTCGGCTTCCTGATGCCGATCGGCGTGCTGCTGA
TCAGGTTCTCGAGCAACGTGAAGAGCGCCAAGGCCGTCAGGGTCCTCTTCTACTGCCACGTCGCCGCGCAGGTCGCCGGC
GTGGCCCTGGCCACCGCTGCGGCGGCGCTGTCGATCACCAACTTCGAGAACGCGTTCAACAACACCCACCAGAGGATCGG
GGTCGCCCTCTACGGCCTCGTCTGGCTCCAGCCGCTCATCGGCTTCCTCAGGCCCGACAGGTGGTTAGCTTGACTG----
------------------ACGCATACATTCGACCAAAGTTCAGTCCTGAGTCCTGACTGAAATTTGTGTGCTCCCTGACT
GAA---------------------TGGAGGTTTGTGATGTCTTCTT----T---TCAGGGGCG---------TGAAGGCG
AGGAGCGTGTGGTACCTGGCGCACTGGCTGCTGGGGT-TGGCGGTGTGCGTGGTCGGGGTGGCCAACGTCTACATCGGCC
TCCACACGTACCGGGAGAGGACCGGCAGGAGCGTCGGGCTCTGGACGGCGCTCCTCACCGCCGAGGTCTCCGCCGTGGCG
CTCGTCTACCTCCTCCAGGACAGGTGGAACCACGTCGTCCGGCAAGAAGAGGCGGCCGCTGGCGACGAGCGGCGGTCGGA
GACGGAGACGTCCGAGGAGTCTCCGTCGTACCCGGCCAACGACCACAAGGAGGTGGCCGTGATGCCGTAGCATGACGATA
TATGGGAGCTCGCTTGGGC--AAATGCAACACCTA-TCTGTACAGTTCATGTGTGCTTGGGAATGGGATTGTGTCTTGGT
AACTCGTTAGCCGAAGCTGCAGATTGAACAGCTTA-CAGTGAGAGTAGATAGAAAACAACCCTCGGTTCTGCATTTTCCC
TGGCCGGGGATTGCTTGATCAATGAACATGAGATT----TACACACGGTACCAATATAGTGAGACATTCCAGGAACAAGA
GTCACAGTATCAAGCCTATCCGCCGCGGCAAGCAAGTGTCGCAGCCACGTAACCTCAGCGCCGACTTCCCCTGCTTCCCC
TTCCACCTCCCATCTTGGGCATCGAGTCGGTGTAGACGAAATTCAGCAAGGCCTTGAACACATTCGGCGCCATGTCTTGT
ATCTGTATGGCACTTGGCTGTAGCAATCCCCTCCTTCATGGGACCAAAGAGGGAGGTTCATCGCAAGTTGGCAACTTGAG
CATGAAACTACCTGACGTTGAAGAATGAAGATGAGCAACTAACTTGCTAGCTACAGGGTGACAATAAAGACCAAGAAAGA
GACCACCATGCCAG-----------AGATAAGCAGCAACACGATTTTAAGATCACTCATTCATCCACAGTAGCAGCAAAC
CTCTTTGTGCAGATAACAGCTAGCTTCCATAGTAGTAGTAGTGACGACCACAATAAGTTCATACAGGTACTGATGCACTC
CACTTACACAGAGTAACCAAGTTCACATAATTTATACCAAAGCATTCCCGGCTTGCAGGATAACCACAGAACGACAACAT
CTATAGCATGGTAAGACAACCAAACCACGAACAACAACATCCATAGCATGGTCAGATAACCCGCAGGGAGCAGCTTGCAT
AGCGATAACGGGCCGGCTAACAGTATAACAACCTCTCAACGGTCCTGAGGGAAGAGCCATGCTGCCAGATACATCTCAGC
GCACCGCTTCCAGGAAATGTTTGGATCACCGGAACCGATGCTGCGGAATCTCATGGAATAGACGCCGAAAGAAGCGCTCT
CCTCATCATAGGCATAGTC
>chr1D_43
------------------------------------------AAATGCCGTGACACAAACTAAAGCAGCAGATGCCTTTG
CTCTGAGGTGTGCTGATCTTGATCAAAAGAAACGATCAACTTTGCCAAACAAACTCAATGGCACAGTTGAACAACACACA
GTTATCTCTGAAACCG----CTTTCTTTCTGCAAAGAAAAAG------AAAATCCCTCGTCTAGATGCCGATGCAGCATC
CAACAATATCCTGCTGTTTGGGTGCT----------------------CCACCACCACAAAAGCCACCCTTTCACACC--
---ATCATACCCTCAGACCTGTAAAAGCACAGCCGAGCCAAAATGTG---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTCT
TGGACCAGCTAAATCTTGCATTCCTGAACTTGCTT-GCTAGATTCTTTCATTCCACCGCAATTTCCTTCGGTCAC----T
GCATCGCACCAACGGTTA--GCGTTTCACCAGCGCTGATTGGTCTCAGTTGTTGTCCTCTGCACATTGTGTAGTTCAGCT
A-GGTTCTCTGCACATTGTTAATGTTCTAGGACTAGTATTTAAGGTGAGGGGGAGCATTGCAAGAAAGGGATGGCTTGGA
TGGGTATGTCCAGTAGCATGAGGTGGTAGC-GGAGAGAGAGAAGAGACTAGAAGCTTGCCCTGTTCATCATCATCTTC--
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-----------------------------TCCTTCTGCCATTGCCGGCCGGCATACGTAGGTGCATCGATGTGATCCTTC
TCAGGT------GCAATGTCAAGAGCACCAAGGCCATCAGGGTCCTCTTCTATTGCCACATCGCCGTGTAGGT-------
----CCCTGGCCACCGCCGCGGCAGCGCTGTCCATCAGCAACTTGGTGAACGTGTTCAACAACGCCCACCAGCAGATCGG
GCTCGCCCTCTACGGCCTCGTCTGGCTCCAGCCCCTCATCGGC-------------------------------------
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>chr1D_994
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--------------------------------------------------------------------------AGCATC
AATGCTACTGTTTGGAAGAAAAGGACTGCTCCCTGCAGTGTGAGGCTGTGTGATTCTCTTGCTTGCAAACTCAACCTATG
GTTCTTCAGATAGCCTGGAAAGATTGAACCAAAGCTACGAGAGCGTTCAGCCATTGGAGGTAAAATG---GTTGTGAAGT
TTTCCTTTTCTCCCCTGTAGATAAGTTTCAGAGATCCTTTCCATGTCCCTATCCAACTTTGGATGCAAGAATCTGAATGT
GTCATTGCTGAACTGCTATCATTGAC-----ACTCGGTTGAACACT--GGAACTGT------------------------
--TGTCGCTGCAGCTCAAGCTTCACACCTTCCTCGTCTGGTCGTGGGTCGGCTTCCTGTTGCCGGTGAGTGTGCTGCTGA
TCAGGTTCTCGAGCAAC-TGAAGAGCGCCAAGGCCGTCAGGGTCCACGTC------------GCCACACAGGTCA-----
---------------GCTGCAGCGGCGCTGTCGATCACCAACTTCGACAACGCGTTCAACAACACCCACCAGCGGATCGG
GCTCGCCCTCTATGGCCTCGTCTGGCTCCAGCCGCTCATCGGATTCCTTAGACCCCTCAGGT------------------
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>chr1B_994
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--------------------------------------------------------------------------AGCATC
AATGCTACTGTTTGTAAGAAAAGGACTGCTCCCTGCAGTGTCAGGGTGTGCGATTCTCTCGCTCGCAAGCTCAATCCATG
GTTCTTCAGATAGCCTGGAAAGATCGAACCAAAGCTTCGAGAGCGTTCAGCCATTGGAGGTAAAATG---GTTGTGAAGT
TTTCCTTTTCTCACCTATAAATAAGTTTCAGAGATTCTTTCCATGTCCCTATCCAACTTTGGATGCAAGAATCTGAATGT
GTCACTGCAGAACTGCTATCATTGAT-----ACTCGGTTGAACATT--GGAACTGTTA--TTTTTGCAGCTGACGCCCAA
GCTGTCGCTGCAGCTAAAGCTCCACACCTTCCTCCTCTGGTCGTCGGTCGGCTTCCTGATGCCAGCTGGCGTGCTGTTGA
TCAGGTTCTCGAGCAAC-TGAAGATCGCCAAGGCCGTCAGGGTCCTCTTCTACTGCCACGTCGCCACAGGTCGGT-----
-----------------CGCGGCGGCGCTGTCGATCACCAACTTTGAGAACACGTTCAACAACACCCACCAGCAGATCGG
GCTCGCCCTCTATGGCTT-GTCTGGCTCCAGCCGCTCATCGGATTCCTTAGACCTGACAGGTTAGTTAGACACATC----
AACAAATACATTGATTTCCTGTAA--------------------------------------------------------
----ATGTTCTTGATGAAAGTGTGTGATGGTTTGTGATCTCTTGTT---CT---TGAGATGAAAGTATGTGATGAAGGCG
AGGAGCGTGTGGTAGCTGGTGCACTGGCTGCCGGGGA-TGGCGGTGTG--------------------------------
--------------------------------------------------------------------------------
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-------------------
>chr1B_1047
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------GTGTGATTCTCTTGTTTGCAAACTCGACATATG
GTTCTTCAGATGGCCTGGAGACATTGAGCCAAAGCTACGACAGTGTTCAGCCATTGGAGGTAAAATG---GTTGTGAAGT
TTTCCGTTTCTCCCCTGTAAATAAGTTTCACAGATACTTTCCATGTTCCTATCCAACTTCGGATGCAAGGATCTGAATGT
GTCATTGTAGAACTGCTACCATTGACACTCCACTCGGTTGAACACT--TGAACTGTTG--TTTTTGTAGCTGACGCCCAA
GCTGTCGCTGCAGCTCAAGCTCCACACCTTCCTCCTCTGGTCGTCGGTCGGCTTCCTGATGCCGGTTGGTGTGCTGCTGA
TCAGGTTCTCGAGCAATGTGAAGAGCTCCAAGACCGTCAGGGTCCTCTTCTACTGCCATGTCGCCACACAGGACGCCGGC
GTGGCCCTGGCCACCGGG-----GGCACTGTCG---ACCAACTTCAAGAACGCGCTCAACAACATCCACCAGAGGATCTG
G--------------------CTGGCTCCAGCCTCTCATCGGCTTCCTCAGACCCCACAGGTAAGAGCACATCGACGACG
AACAAACACATGATCCACACGCTTAGATTCTACTATCA---------------------AACTTTGAGTATTTTCCCCCT
TATCATCTCCTTGATGTTTCTTGTT---------TGGTTATTTTGTGTTTCTGCTCAGGGGCG---------TGAAGGCG
AGGAGCGTGTGGTACCT----CACTGGTTGCTGGGGGGTGGCGGT-----------------------------------
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-------------------
>SNPs
-----S------S-------------------------SSS-------S-------------------------------
----------------------------------------------------S----------------------S----
-----------S----SSSS---------S-----------SSSSSSS--------------------------------
----------------S--------------------SSS----------------------------------------
--------------S----------------S--------------------------------S---------S-----
--------------------------------------------------------------------------------
--------------------------------SSS---------------------------------------------
-----------------------------------S--------------------------------------------
------------------SS-----------------------------S------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-S---------------------------S-S-
--------S------------SSSS-------------------------------------------------------
--------------------S---------S------------------------S----------SSSSSSSSSSSSSS
S---------SS------------------S-------------------S---------------S-SSSSS-------
--------------------------------------------------------------------------------
----------------------------------------------------------------S------S--------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
------------------------------------------S--------------S----------------------
--------------------------------------------------------------------------------
--------------------S------------------------S-------S--------------------------
---------------------------------------------------------------S-SS-------------
S--S-----S----S--S--S---SS------------------------------------------------------
----------S---------S--SS-----------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
------------S---------------------------------------------------------------S--S
SSS-SSS-------------------------------------------------------S--S--------------
---------------------------------------------------S--S-------------S-----------
--------------S--------S-----------SSSS-------S---------S---------------------S-
-------------S------------------------------------------------------------SS--S-
------------------------------------------SS--------S---------------S-----------
--------------------------------------------------------------------------------
--------S----------S---S------------S---S-S--------------S-------SS-------------
-----S-------SSSSSSSSSSSS---------------S-S----S------------------------------S-
--------------------------------------------------------------------------------
-------------------------S-----------S--S-----------------S-------------S-------
---------------------------------------S---------------------SS-----------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------SSS---
-------------------
>forward_513
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------ATCCGGCTTGCTAAAGGAGG-----------------------------------------------
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-------------------
>reverse_1744
--------------------------------------------------------------------------------
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---------------------------------------------------------------TGGCGGATACATGGACG
AAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_1654
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCACCAACTTCCAGAACGCC--------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------
>reverse_3103
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------ACAGGGAGCAGCTTGCAT
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
