>input_sequence_63043
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--------------------------------------------ATGGCGGTCCCATCGTCGTCCTTGTTGTCGTCGCTG
CTGCTCCTCGCGCTC---CTGCTGCATCATTGCTCCGCGGCCCAGGATCACGGCAGCGCCGCCGTCATCGTCAACATCTC
GTCCCTCGAGGACGTCGTCCGCGACCGCGCGTTCGAGCTGCTCCACCGCACCGACAAGCTCGTGGGCGTGCCCCTCACGG
CCTGCCCGTCGCCGTGCGGCCTCGTCGAGGTCCAGGCCTCGGCGCTGCGCGTGCGGAGCAGCTCCCTCTGGGCCGACGGC
GTCAACGCCACC------GCCGCCGACACCGCGGGGTTCACCGTGCCGCCGCGCGTCGTGCCGTCCCCGTTCGCCCGCCG
CGTCGACGTCGTCTTCGAGCGGTTCGTCGGCGGCAACTCCTCGTCCGGCGCGCTCTTCGCCGCGCCGCCCGGGTACGCGC
TGGCTGCCCCCGTGGCCGCGCTGCTCGCGTACGACGTGTCGACCGGAAACAACGGCAGCAGGGCTGTCGGACTCCGGGCG
CTCGGCGCGCCGGTCCGCCTGGAGTTCGGGTACCTCGCGCCTGCGGCGGCGAACGGGACGCCGCCGTTTAACGCCACGGC
GGCAAGGTGCGTAACCTTCGCGGTGGACAGCGGGAAGGCCAAGGCCGTGGCCACGCACGCCATGGCGTCGGACACCGCGT
GCACGGTGACCGGCACGGGCCACTACGGCGTGGCGGTGCGGCTGCAACCGACACCGCCTTCGCTGACGCCGCCGACGCCG
CAGCCGCCTGCAGCGGTGCGGGAGCGGTGGTGGGCGTGGATGGCGGTGGCCGGCGTCGGCGGGGTGGTGGTGGTGGGCTT
CCTGGCGGCCACCGTGGTCGCGGCGGTGCGGTGGAGCAGGAGGCGCAGGAGGGAGGAGATGGACCTGCGGGCGCTGGCCG
GGGAGGAGCTGGGGAGGATGGCGGTGCGGGGGAGCAGGATGCCGGCGGCGAAGATGGTGAGGACGCGGCCGGAGCTGGAG
GACGGGAGCCCCATGGCGTGGCGGCGCTAG--------------------------------------------------
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>chr7B_1_TraesCS7B01G014900
GGACAACCATGGACAGGGGAGGGAAGCGCATGTCCATGAATTCCAGGGACAAAGCCGCACCTGCAGGCTAGGAATCGCGC
AAGGGGATGGCACGCCGGGCGCACTCCCGGCCGGGCGAGCTGCAGAGGCAGCTGCCGCCGGGTAACCAAGGACACCGTAG
ATCCGTAGCTCGAGGGGAAGGGAGCGGGTGGGGCAGATGCCACAGCACGAACGGAGGGAGCTGCACGTCGGAGGAGGCCA
GGGGCCCAGCACGGCCGTGCTGACCAGCCCTTCGTCGCCGACGGCGCAGGGATGGGCGGAGGTGGACGGCGTTTTGCACC
ATATGATCGGGGTACCCCTATCTCATCTTCTTCCTCTTGGGAGACCGGTGCATACCTTCCTTTTCCTCATCCTTCTCGCC
ATCTCCCTCCTCGTGGATTTTTCGGTCTCACCATCGCCAAGTCAAGGCATTACCACATTGTCACTAGGTTGTCATTACCT
CGGTAACAGTTTCGGTTAGCTCCCCTCCCCCTCCTCATTCTTCGTCCTCCTTCCTTCACTCATGCACTCCCTCCACTAGT
TCGGGCAAGCGTTCACTATCAAGAATGAAGACTGAACGCTCGCGTGGTAAAATTTTCCTCTCACCTTCAGGAGTAAATAT
TCTTTCTTTAATTTTAGTATAAAGTTGGGTTATCTATTTTGGAACGGAGGGAGTACATAGAAATGAGTGTATGTGCGCAT
GTATGAGCATGTATGTCTGCCTCTGCACTGTGTTGAAAAAA----GGGATAATATAATGCTGCATTTCATCTGAGTGCTG
GTACTAATTAACAGCCAGCATCCCCCCTAAATATAGGAGATCATTTCCCTCCATTGGTGATTAACCTCTCGTAGCTCTGG
CCGGAACCTCCTCCGCTCGCTCCATCCTTCCCGGCGCGCCGTTTCGAGCCCTCCGTCGAGATGGCGGCATCCTATCGCCG
CCGCCACATGCCACGGAGCTAGCCCTCCAGAAAGAGAGGCAGCAATGGCGGTCCCATCGTCGTCCTTGTTGTCGTCGCTG
CTGCTCCTCGCGCTC---CTGCTGCATCATTGCTCCGCGGCCCAGGATCACGGCAGCGCCGCCGTCATCGTCAACATCTC
GTCCCTCGAGGACGTCGTCCGCGACCGCGCGTTCGAGCTGCTCCACCGCACCGACAAGCTCGTGGGCGTGCCCCTCACGG
CCTGCCCGTCGCCGTGCGGCCTCGTCGAGGTCCAGGCCTCGGCGCTGCGCGTGCGGAGCAGCTCCCTCTGGGCCGACGGC
GTCAACGCCACC------GCCGCCGACACCGCGGGGTTCACCGTGCCGCCGCGCGTCGTGCCGTCCCCGTTCGCCCGCCG
CGTCGACGTCGTCTTCGAGCGGTTCGTCGGCGGCAACTCCTCGTCCGGCGCGCTCTTCGCCGCGCCGCCCGGGTACGCGC
TGGCTGCCCCCGTGGCCGCGCTGCTCGCGTACGACGTGTCGACCGGAAACAACGGCAGCAGGGCTGTCGGACTCCGGGCG
CTCGGCGCGCCGGTCCGCCTGGAGTTCGGGTACCTCGCGCCTGCGGCGGCGAACGGGACGCCGCCGTTTAACGCCACGGC
GGCAAGGTGCGTAACCTTCGCGGTGGACAGCGGGAAGGCCAAGGCCGTGGCCACGCACGCCATGGCGTCGGACACCGCGT
GCACGGTGACCGGCACGGGCCACTACGGCGTGGCGGTGCGGCTGCAACCGACACCGCCTTCGCTGACGCCGCCGACGCCG
CAGCCGCCTGCAGCGGTGCGGGAGCGGTGGTGGGCGTGGATGGCGGTGGCCGGCGTCGGCGGGGTGGTGGTGGTGGGCTT
CCTGGCGGCCACCGTGGTCGCGGCGGTGCGGTGGAGCAGGAGGCGCAGGAGGGAGGAGATGGACCTGCGGGCGCTGGCCG
GGGAGGAGCTGGGGAGGATGGCGGTGCGGGGGAGCAGGATGCCGGCGGCGAAGATGGTGAGGACGCGGCCGGAGCTGGAG
GACGGGAGCCCCATGGCGTGGCGGCGCTAGCTCCTCCGCCGGTCGCACTGTCGCCGCCTTGATTAACTAGGTGTACC---
-TTTTTTCTCAGCATCAGATATTCAGACTTGTATTGTTGTTGTACAGTATTACACACAGTACTTTGTAGTACTCTATATA
TATATATGATGTTTTGTGTACACTCGGGTTAAAAATGTACATTGAAATAGGTAGGTTATTATCTTGAGAGCAACATCTCA
CTGCATGTTCT-TGAGAAC--TAGCAGCAGATTGCAATAGACTGTCCCACTTCATTTACTGAATCTAATAAGTTGCTG--
-TTCTGATGCTCCATCCAGGAT------AGAACAAAACTCAAAACTGTGACTGAAATATAGTGCTGATATGCACATTATT
TGGTGTCACCAAATTCACAAGAAGGAACATCTGGCCATGAAAAAAAAAATACATACACATTACATGCATGGCTATGAAAA
ATACATCATCATTTCTTCTCCTAAGAACTTCGAACGATTTAACGATGGTGATAGCAGGGTTACAGATTTCCTCCC-----
-----ATTTTATACTTCTATATTTGTTTGCTGGAGCAAGAAA-----CTGGGATTTACTCTGTTCCAACTTCAGTGCTTG
TGAAGAGCGGCAACGGTCAACAAACATAAGCTCAATT----GTACATCACTCAAAATTT-AGGTAACAATACATAGTTAA
CAAAGTTACAGAGAATTACTGCACGACGGCACTGCGTCTTCTTCAGATTCCAAATAGAGATGAACTCCTCCGGAGTACGA
GAACAGAGTGCCGTATATCTGTTCTCCAAGCATGTCCACTCTCTGAAACTGATTATTGTACATCTCCTGAGAAACTGCTG
CAGTGAACACGTA-----TCATCAACAATCTCTACTAATTGTTTCCGTTCGATGTGTATGACCAATACTCGTTGACCAGT
TCGCGGAAGAGAGATCCTTCAGTTTCCATGAGCTTCGCAGGTTTATCATACTCCACTGCTTTCCCTGGAAGTGTTCATAT
ATAGCCACTGAAAAAAATAGCGCGCTATAAC
>chr7D_736
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---------------TCTGCGTCTGTACTGGGTTGAAAAAAAAGAGGGATAATATAATGCTGCATTTCATCTGAGTGCTG
GTACTAATTAACAGCCAGCATCCCCCCTAAATATAGGAGATCATTTGCCTCCATTGGTGATTAACCTCTCGTAGCTCTGG
CC---ACCTCCTCCGCTCGCTCCGTCCATCCGGCCCGCCG--TTCGAGCCGTCCGTCGAGATGGCGGCATCCTACCGCCG
CCGCCACACGCCACGGCGCTAGCCCTCCAGAAAGAGAGGCAGCAATGGCGGTCCCATCGTCGTCCTTGTTGTCGTCGCTG
CTGCTCCTCGCGCTCTTCCTGCATCATCATTGCTCCGCTGCCCACGATCGCGGCAGCGCCGCCGTCGTCGTCAACATCTC
CGCCGTGGAGGACGTCGTCCGCGACCGCGCGTTCGAGCTGCTCCACCGCACCGACAAGCTCGTGGGCGTGCCCCTCACGG
CCTGCCCGTCGGCGTGCGGCCTCGTCGAGGTCCAGGCCTCGGCGCTGCGCGTGCGGAGCAGCTCCCTCTGGGCCGACGGC
GTCAACGCCACCGACGCCGCCGCCGGCACCGCGGGGTTCACCGTGCCGCCTCGCGTCGTGCCGTCCCCGTTCGCCCGCCG
CGTCGACGTCGTCTTCGAGCGGTTCGT---CGGCAGCAACTCGTCCGGCGCGCTCTTCGCCGTGCCGCCCGGGTACGCGC
TGGCCGCCCCCGTGGCCGCGCTGCTCGCGTACGACGTGTCGACCGGGAACAACGGCAGCAGGGCCGTCGGGCTCCGGGCG
CTCGGTGCGCCCGTCCGCGTGGAGTTCGGTGACCTCTCGTCGGCGGCGGCGAACGGGACACAGCCGTTCAACGCCACGGC
GGCGAGGTGCGTGACCTTCGCGGTGGCCAGCGGGCAGGCCAAGGCCGTGGCCACGCACGCCATGGCGTCGGACACCGCGT
GCACGGTGACCGGCACGGGCCACTACGGCGTGGCGGTGCGGCTGCAACCGCCACCGCCTTCGCCGACGCCGCCGACGCCG
CAGCCGCCTGCGGCGGTGCGGGAGCGCTGGTGGGCATGGATGGCGGTGGCCGGCGTCGGCGGGGTGGTGGCGGTGGGTTT
CCTGGCGGCCACCGTGGTCGCGGCGGTGCGGTGGAGCAGGAGGCGCAGGAGGGAGGAGATGGACCTGCGGGCGTTGGCCG
GGGAGGAGCTGGGGCGGATGGCGGTGCGGGGGAGCAGGATGCCGGCGGCGAAGATGGTGAGGACGCGGCCGGAGCTGGAG
GACGGGAGCCCCATGGCGTGGCGGCGCTAGCTCCCCCGCCGGTCGCACTGTCGCCGTCTGGTTTAACTAGGTGTACCTTT
TTTTTTTCTCAGCATCAGATATTCAGACTTGTATTGTTGTTGTACATTATTACACACAGTACTTTGTAGTACTCTATATA
TGATATA------TTGTGTAAACTCAGATTAAAAATGTACATCGAAATAGGTTATCTT---TCTTGAGAGCAACATCTCA
CTGCATTTCTT-TGAGAACAGTAGTAGCAGATTGCAATGGACTGTCTACTTCCTTT------------------------
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>chr7A_738
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-----------------TGCGTCTGTATTGTGTTAAAAAAA-----GGATAATATAATGCTGCATTTCATCTGAGTGCTG
GTACTAATTAACAGCCAGCATCCCCCCTAAATATAGGAGATCATTTGCCTCCATTGGTGATTAACCTCTCGTAGCTCTGG
CC---ACCTCCTCCGCTCGCTCCGTCCATCCGGCCCGCCG--TTCGAGCCCTCCGTCGAGATGGCGGCATCCTACCGCCG
CCGCCACACGCCACGGCGCTAGCCCTCCAGAAAGAGAGGCAGCAATGGCGGTCCCATCGTCGTCCTTGTTGTCG---CTG
CTGCTCCTCGCGCTCTTCCTGCATCATCATTGCTCCGCTGCCCAGGATCGCGGCAGCGCCGCCGTCGTCGTCAACATCTC
CGCCGTGGAGGACGTCGTCCGCGACCGCGCGTTCGAGCTGCTCCACCGCACCGACAAGCTCGTGGGCGTGCCCCTCACGG
CCTGCCCGTCGCCGTGCGGCCTCGTCGACGTCCAGGCCTCGGCGCTGCGCGTGCGGAGCAGCTCCCTCTGGGACGACGGC
GTCAACGCCACCGACGCCGCCGCCGGCACCGCGGGGTTCACCGTGCCGCCCCGCGTCGTGCCGTCCCCGTTCGCCCGCCG
CGTCGACGTCGTCTTTGAGCGGTTCCT---CGGCAACTCCTCCTCCGGCGCGCTCTTCGCTGCGCCGCCCGGGTACGCGC
TGGCCGCCCCCGTGGCCGCGCTGCTCGCGTACGACGTGTCGACCGGGAACAACGGCAGCAGGGCCGTCGGGCTCCGGGCG
CTCGGCGCGCCCGTCCGCGTGGAGTTCGGGGACCTCGCGCATGCGGCGGCGAACGGGACGACGCCGTTCAACGCCACGGC
GGCGAGGTGCGTGACCTTCGCGGTGGAGAGCGGGAAGGCCAAGGCCGTGGCCACGCACGCCATGGCGTCGGACACCGCGT
GCACGGTGACCGGCACGGGCCACTACGGCGTGGCGGTGCGGCTGCAACCGCCACCGCCTTCGCCGCCGCCGCCGCCGCCG
CAGCCGCCTGCGGCGGTGAGGGAGCGGTGGTGGGCGTGGATGGCGGTGGCCGGCGTCGGCGGGGTGGTGGTGGTGAGCTT
CCTGGCGGCCACCGTGGTCGCGGCGGTGCGGTGGAGCAGGAGGCGCAGGAGGGAGGAGATGGACCTGCGGGCGCTCGCCG
GGGAGGAGCTGGGGAGGATGGCGGTGCGGGGGAGCCGGATGCCGGCGGCGAAGATGGTGAGGACGCGGCCAGAGCTGGAG
GACGGGAGCCCGCTGGCGTGGCGGCGCTAGCTCCTCCGCCGGTCGCACTGTCGCCGTCTGGTTTAACTAGGTGTAG---T
TTTTTTTCTCAGCATCAGATATTCAGACTTGTATTGTTGTTGTACATTATTACACACAGTACTTTGTAGTACTCTATATA
TGATATA------TTGTGTAAACTCGGATTAAAAATGTACATCGAAATAGGTC-------ATCTTGGGAGCAACATCTCA
CTGCATGTTCTCTGAGGAC--TAGTAGCAGATTGCAATGGACTTTCTACTTCATTTCTACATATAATTTGCTCTTCTCAA
CTTCTGATGCTCCCTCCACTTCCAGTACAGAGCGAAACTCAAAATTGTGACCGAAATATAATGCCAATATGCACATTATT
TGGTGTCACTAAATC----------------------------------TACATACAAATTAT-----------------
ATACATCATCATTTCTTCTCCTAACAAGTTCG--------------------AGCAGGGTTACAGATTTGAAGTTCTTCC
CAATTACTGTAGACTTGTATGCTTGATTGCTGGAACGAGGAACTATTCTGGGATTTGCTCTGTTCAG-CTTCAGCGCTTG
TGAAGAGCGGCAACGGTCAACAAATAATAAGCTAAACTGTAGTATATTACTCAAAATTTCAGGTAACAATACATAACTAA
AAGAATCCAGGCAATTT-CTGGAAGATGGCACTGCATCTTCTTCAGATTGCAAATAA--ATGAGCTCCTCTGGAGTATGA
CAAGAGATTTTTCTTTCTGATCCAAACATGCCCGT----TCCCTGAAACTGGTTCTTGTACATCTCCAGAGAAACTGATT
CTTGAACAGTAACGCACGTCATCAACGATCTCTCCTAACTGTTTCAGTTCGATGTGTACGACGAGTACTCGTTCACCAGT
TTGCGGAAGAGAGATCCTTCAGTTTCCATGAGCTTTATAGGTTTGTCATACTCCACTACTCTCCCTGGAAGTGTTCAT--
-------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----S----S------------------------------------------------------
----------------------------------------------S---------------------------------
--SSS------------------S---S---S-S-SSS-SSS--------------------------------S-----
--------S-------S---------------------------------------------------------------
----------------------SS--------------S----------S----------------S-------------
SS--S-S-------------------------------------------------------------------------
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-------------------------S------------------------S-----------------------------
---------------------------SSS--------------------------------------------------
----S-----------------------------------------S-----------------S-----S---------
-----------S------S-----------S-------------------------------------S-----------
---S--------S-------------------------------------------------------------------
--------------------------------------------------S------------S----------------
-----------S--------------------------------------------------------------------
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--------------------------------------------------------S--S-S------------------
----------------------------------------------S---------------------------------
-SSSSSSSSSSSS-------S------S--------------S---------SSSS-SSS--------------------
------------------------S-------------S-------SSSS-S-S--SSSSSS--SSSS-SSSS-S--S--
-------------S----SSSS---------S-S----------S------S--------S---SS--------------
---------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S----SSSSSSSSSSSSSSSSSS
------------------------S--S----SSSSSSSSSSSSSSSSSSSS-----------------SSSSSS-----
------S-S--S----S---SS---S--------S-S--S----------------S--------SSS------S-----
------------------------S-SS-SSSS--SS-------S--S---------------------------SS---
S-S-S-SSSS-SS-S--S---S-S--S--------S-------------S------SSS----S------S------S--
S--S---S-SSSS-S-S-SSSSSSSS--S--SS--SSSS--S---------S--S------------S---------S-S
-SSSS-SSSSSSS-------------S------S----S------S------------S---S-S--------S------
-S---------------------------------SSS------S------------S--S-----------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_407
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-------------------------------------------------------------------CATCCTTCTCGCC
ATCTCCC-------------------------------------------------------------------------
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>reverse_2311
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----------------------------------------------------------------------AGTTGCTGTT
CTGATGCTCCA---------------------------------------------------------------------
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