>input_sequence_63040
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---------------------------------------AGACACCGCTAGCAAAAGCAAAGC---TACTACTAGAACCA
ACAGTGACATGGAGCTCATATTCTCTGATGAAGCGCTGGCCATTGTCGTCCCCATAGCTGCCTACTGGGTCTACTCCGGC
ATGTACATGGCGCTTGGACGGTCCATGGACCAGTACAGGCTACACCCAAGGGAGGAGGAGCGCAGCAAGAACCTCGTGCC
CAAGCGCGACGTCGTCAAGGGCGTCCTCCTCCAGCAGCTCGTGCAGGCCGCCGTCGCCGCCGCCATTTTCACAGTATGTT
AGTACAACTCTGCATGCATGGACATGCAAACCTTCATATACATATGATATAA------------------ACGTACCTAC
C-----------------GCAGCTTCGAGGCGAAAGCACCGGGACGGCCGCCGGCGAAGCACGGCAGCGGACGACCTGGG
CAACGTGGGTGACGGTGGCGATGCAGATCGCGGTGGGCATGGCCGTGCTGGACGGGTGGCAGTATGCGTGGCACCGGTAC
ATGCACCTCAACAAGTTCCTGTGCCGGCACGTCCACTCGTGGCACCACCGCCTTGTCGTGCCCTACGCCTTGGGCGCGCA
GTACAACCACCCCATGGAGGGCCTCCTCCTCGACACCGTCGGCGGCGCGCTCGCCTTCCTCGCCTCCGGCATGGCGCCCC
GCGTCTCCATCTTCTTCTTCACGCTCTGCACCGTCAAGGGCGTCGACGACCACTGCGGCCTGTGGCTGCCAGGGAACGTG
TTCCGCCTCTGCTTCTGGAACAACACGGCATACCACGACATCCACCATCAGCCGCGAGCCAGCAGATACAACTTCTCGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGCACGCACATGCCCTATGTTGTCGAGC---ACAGGACCCAAGGAGGGC
TCCACGTGCGGCCCGTGGAAGCCCTTAACTAAGCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATTGTTGTGTTTCAGATTTGACTTATATG
TCACCAGAGTATTTATCCTTCCCTCATGCAACCAGGATACTACTATACATCACAAATTGATATCCCAAAAAA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr7A_1_TraesCS7A01G082900
CTGCTCCCGGTAAAAACGAGCAGGTGTTCATACTCCAGGGTTCGGTACTTCGATTGCCATATTACACTGAAACAGAAGTG
CTCAGTGAACATGCCGAGGAACCTAAGATATCGTCGTACACAAGTTTAAGGCAGAGGAGCATCAAGCACGCACAAAAAGA
AAGCCATGTAATGACAAACTGAAGAGTTCTTTTCAGTCCAACAGCATGCGCATCGGAGTGCTCTCTTTCCCTTGTTCTTG
GTCTTGCTTTATTTCCACGAGCGGCAGGGTGGACGGATGGCGGTACAAAGAGCTGCGCTGTCCACCGCACGAAGAAGAGG
AGACG---AGGTGGGAGGGAGGAGAGAGAGGAAGTGCGACCAAATAGTTTCTAGGCCTCGCTTCATTGCCCGAACGACGT
GCATCTTAGTAACCGTAAAAACTAGTTGATTCACCGGACCTTAGATAATGTGGCCCACTTGGCAGCTGCTCCCGAAATAA
ATGTGAATGTAAAAAACAGTGCG--------------CCAGCAGCCAAAACGGAGCCACAGGAAAAGAATCGAGCGGCCG
AACGAGCGCAGCGCACACAAATATGC--------------------------CTCCGGATGGCGGATAGTCTAGCGAGAT
TTATACTAGGTTAGATGAGGTTTTGAGTTTTGGGGATTCTCCCTTGAATCGACACGCACAAGCTTATATATTACTAAACG
ACTAAAATCCACACATGGAACGACCGATATG-TTGACTAAATTCCGTATGTGGAACACGTCCAGCTTGAACCACTTTTGA
CTAA--AATAAATTCCTATGTCCATGGAACGCCTTGCTTGAACGACTTTTGACTAAATTCCGTATGTGG-ACGTCTGGG-
----TAAAGCAACAGAATTTCTATATGGCCAAG--------ATCTACTGC------------------------------
--------------------------------------------------TAGATTTTAAAG-AAAATTC-----AAGAG
TCCGATGATTACAGCTTGACAACGGAGTCCCATGACCGAGGCAATCTGT---------AACCAGCTAGCATTTTCATCGG
TCGATATA----AACCCATAGAGCCAGTCTACTACTACCAGACACCGCTAGCAAAAGCAAAGC---TACTACTAGAACCA
ACAGTGACATGGAGCTCATATTCTCTGATGAAGCGCTGGCCATTGTCGTCCCCATAGCTGCCTACTGGGTCTACTCCGGC
ATGTACATGGCGCTTGGACGGTCCATGGACCAGTACAGGCTACACCCAAGGGAGGAGGAGCGCAGCAAGAACCTCGTGCC
CAAGCGCGACGTCGTCAAGGGCGTCCTCCTCCAGCAGCTCGTGCAGGCCGCCGTCGCCGCCGCCATTTTCACAGTATGTT
AGTACAACTCTGCATGCATGGACATGCAAACCTTCATATACATATGATATAA------------------ACGTACCTAC
C-----------------GCAGCTTCGAGGCGAAAGCACCGGGACGGCCGCCGGCGAAGCACGGCAGCGGACGACCTGGG
CAACGTGGGTGACGGTGGCGATGCAGATCGCGGTGGGCATGGCCGTGCTGGACGGGTGGCAGTATGCGTGGCACCGGTAC
ATGCACCTCAACAAGTTCCTGTGCCGGCACGTCCACTCGTGGCACCACCGCCTTGTCGTGCCCTACGCCTTGGGCGCGCA
GTACAACCACCCCATGGAGGGCCTCCTCCTCGACACCGTCGGCGGCGCGCTCGCCTTCCTCGCCTCCGGCATGGCGCCCC
GCGTCTCCATCTTCTTCTTCACGCTCTGCACCGTCAAGGGCGTCGACGACCACTGCGGCCTGTGGCTGCCAGGGAACGTG
TTCCGCCTCTGCTTCTGGAACAACACGGCATACCACGACATCCACCATCAGCCGCGAGCCAGCAGATACAACTTCTCGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGCACGCACATGCCCTATGTTGTCGAGC---ACAGGACCCAAGGAGGGC
TCCACGTGCGGCCCGTGGAAGCCCTTAACTAAGCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATTGTTGTGTTTCAGATTTGACTTATATG
TCACCAGAGTATTTATCCTTCCCTCATGCAACCAGGATACTACTATACATCACAAATTGATATCCCAAAAAAGTTC----
-ATATATATAGGAGCATGTGCAT------TTCCTGTCGGCGGTGGTTTGAAATATCTGTCATTCGAGCATCTGAGCAATT
TCTTGTCGATGAAAATGGCATGCTT-CAAGG-C-TGTCAGAGAAAAGAATTGCTACATCTGCATCAAAAGTTC-------
AAAACCAACACCTTGATTTTCTGTACAACA----GCACCACGTCAGACTAGATAGTAAAGCTTCATGTTCCGCGAGCTTC
TATTCGGAGTTCTGTCTTTACAAAAGTTAGAAAACAT---CTTCATTCGTGCTGACCGGATTACAAACAATAAGGCCTCC
TTTGGTTTAGAGGAATTTCATAGGAATTCTAGAGAATAGGATTCTTATAGGATTTTTTTTCTTTAGAGCCCTTTGGTTCA
TAGAAATGGATTCCTATTCCTACATAGGATTGGTTCCCATCCTCCACATTTCATAGGAAAATAAAAAAAAGCCTAGACTC
AATGTAAAAATTCCTTTGGTGTCAACCAAATGACATCTTGTTTCCTATTCCTACTCATAGGATTTGAGATACATGTCATC
TCATTTTCTACAAGATTGCTATTCCTATGATAATCCTATCCTATGAACCAAAAGAGGCCTAAAATAGTACTAGGCTAATA
TTCATAGGCAAGTTGTGTCCTGTGTGAAACTCTGGCATGCAGCTAAAAGAAATCAGTGTTGCAATTCAGATTACCTTGTC
GCCTTGTCGCCTTGTCGCTACATGAATGTAGAACATGTTATAGTATATATTTTTAAGAGTGTACCCCAGATCCGAGTATA
TAAGAT----AGGAAGAATGAAATCTCAGGAGCATCTATCTGAAAGAAACCATCATTTATACAACTATGTATCCCATTAA
AGCGAGAGAGTTCTTTTATTTTTTGAAAAACGAAAGATCACAGTAAGAAAGCAGAGAAGTAAGTAAGAGAAGATGCCGAC
CAAGAAACATAAATATGTGATCAGACAGCATCAAAACATGTTCCAGGTTGGAAGGCAAGTCCAG
>chr4A_1
CTGCTCCCAGTAAAAACGAGCAGGTGTTCATACTCCAAGGTTTGATACTTCGATTGCCATATTACACTGAAACAGAAGTG
CTCGGTGAACTTGCCGAGGAACCTGGGATATCGT----CACAAGTTTAAGGCAGAGGAGCATTAGACATGCACAAAAAGA
AAGCCATGTAATGACAAACTGAAGAATTCTTTTCTGTTCAACAGCATGCACATCGGCGTGCTCCCTTTCCCTTGTTCTTG
GTCTTGCTTTATTTCCACGAGCGGCAGGGTGGACGGATGGCGGTGCAAGGAGCTGCGCTGTCCACCGCACGAAGAAGAGG
AGACG---AGGTGGGAGGGAGGAGAGAGAGGAAGTGCAACCAGATAGTTTCTAGGCCTCGCTTCATTGCCCGAACGATGC
ACATCATAGTAATCGTAAAAAGTAGTTGATTCACCGGACCTTAGATAATGAGGCCCACTTGGCAGCTACCCCCGAAAGAA
ATGTGAATGTAAAAACGAGTGAATGGTTCACCACGCACCAGCAGCCAAAGCGGAGCCACAGGAAAAGAATTGAGCG----
------------------------GC--------------------------CTCCGGATGGCGGGTAGTCTAGCGAGAT
TTA---TAGGTTAGATGAGGTTTTGAGTTTTGGGGATTCTCCCTTGGACCGACACGCACAAGCTTA-----TACTAAACG
ACTAAAATCCACACATGGAACGACCGATATTATTGACTAAATTACGTATGTGGAACACGTCCGGCTTGAACCACTTTTGA
CTAAG---TAAATTCCTATGTGCATGGAACGCCTTGCTTGAACGACTTTGGGCTGTATTCCGTATGTGGAACGTCTAGG-
----TAAAGCAACAGAATTTCCATGGCCAAGATCCACTAAAATCTACTGC------------------------------
--------------------------------------------------TAGATTTTAAAG-AAAATTC-----AAGAG
TCCGATGATTACAGCTTGACTA----------------------------GGGAGTACAACCAGCTAGCATTCTCATCGG
TCGATATA----AACCCAGAGCGCCAGTG---TACTACCAGACACCGCTAGCAAAAGCAAAGC---TACTACTAGAACCA
ACAGTGACATGGAGCTCGTATTCTCTGATGAAGCCCTGGCCATTGTCGTCCCCATAGCTGCCTACTGGGTCTACTCCGGC
ATGTACATGGCGCTTGGACGGTCCATGGACCAGTACAGGCTACACCCAAGGGACGAGGAGCGCAGCAAGAACCTCGTGCC
CAAGCGCGACGTCGTCAAGGTCGTCCTCCTCCAGCAGCTCCTGCAGGCCGCCGTCGCCGCCACCGTTTTCACGGTAGTAT
ATAACAGCTCTGCATGCATGCATCGACCTG------TATACACATGAATTAC------------------TTGTACTTAC
ACTGACGTACCTATACGGACAGCTGGGAGGCGAAATCCCC------GCCGCCGGCGAATCACGGCAGCGGACGACCTGGG
CCATCTGCCTGACGGTGGCGCTGCAGATCGCTGTGGGCATGGCCGTGCTGGACGGGTGGCAGTACGCGTGGCACCGGTAC
ATGCACCGCAACAAGTTCCTGTACCGGCACGTCCACTCGTGGCACCACCGCCTCGTCGTGCCCTACGCCTTCGGCGCGCA
GTACAACCACCCCGTGGAGGGCCTCCTCCTGGACACCGTCGGCGGTGCGCTCGCCTTCCTCGCCTCCGGCATGTCGCCCC
GCGTCTCCATCTTCTTCTTCACGCTCTGCACCATCAAGGGCGTCGACGACCACTGTGGCCTGTGGCTGCCGGGGAACGTG
TTCCGCCTCTGCTTCTGGAACAACACGGCGTACCACGACGTCCACCATCAGCCGCGCGCCGGCAGATACAACTTCTCGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGGACGCACATGCCCTACGTCGTCGAGC---ACAGGCCCCAAGGAGGGC
TCCACGTTCGGCCCATGGAAGCCCTTAGCTAAGCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATT---GTGTTTCAGATTTGACTG-TATG
TCAAAAAAATATTTATCCTCCCCTCCTGAAACGAGGATACTACTACATATCACAAATTGAAATCCCAAAAAAGTTC----
-ATAT----------AGGAGCTTGTGCATTTCCTGTTGGCGGTGTTTTGTAATATCTGTCATTCGAGCATCTGAGCATTT
TCTTA---ATGAAAATGACATGCTTTCAAGGCC-TGACAAAGAAAAGAAATGCCACATCTCAATCGCAATAAGCTGCATT
AAAACTAGGACCTTGATTTTCTGTACAACA------ACCACATCAGACTAGTTAGTAAAGCTTCATCCTCTGCGAGCTTC
TATTCGGAGTTCTGTCTTCACAAAAGTTAGAAAACACCTGCTTCATTCGTGCTGACCGGATTAAAAA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AAAATAGTAGTAGGCTAATA
TTCATAGGCAAGTTGTGTCCTGTGTGAAACTCTGGCATGCATGTTAGAATAAATC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr7D_176
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AAACTGAAGAATTCTTTTCAGTCCAACAGCATGCACATCGACGTCCTCCCTTTCCCTTGTTCTTG
GTCTTGCTTTATTTCCACGAGCGGCAGGGTGGACGGATGGCGGCACAAGGAGCTGCGCTGTCCACCGCACGAAGAAGAGG
AGGAGACAAGGTGGGAGGGAGGAGAGAG--GAAGTGCGACCAGATATTTTCTAGGCCTCGCTTCATCGCCCGAACGACGC
GCATCTTAGTAACCGTAAAAAGTAGTTAATTCGCCGGACCTTAGATAATGAGGACCACTTGGCAGCTACTCCTGAAAGAT
ATGTGAATATAAAAAAGAGTGAACGGTTCACCACGCGTCAGCAGCCAAAACGGAGCTACAGGAAAAGAATCGAGCG----
------------------------GCCGAACAAGCGCAGTGCACGCGGATGCCTCCGGATGGCGGGTAGTCTAGCGAGAT
TTG---TAGGTTAGACGAGGTTTTGAGTTTTGGGGATTCTCCCTTGGATCGACACGCACAAGCTTA-----TACTAAACG
ACTAAAATCCAAACATGGAACGACCGATATG-TTGACTAAATTCCGTATGTTGAACACGTCCGGCTTGAACCACTTTTGA
CTAAG---TAAATTCCTATGTGCATGGAACGCCTTGCTTGAACGACTTTTGACTAAATTCCGTATGTGGGACGTCTGGG-
----TAAAGC--------------------------------TCTACAGC------------------------------
--------------------------------------------------TAGATTTGAAAGAAAAATTC-----AAGAG
TCCGATGATTACAGCTTGACAACGGAGTCCCATGACCGAGGCAATCTGTTGGGAGTATAACCAGCTAGCATTCTCATCGG
TCGATATATATAAACCCAGAGCGCCGGTG---TACTACCAGACACTGCTAGCAAAAGCAAAGT---TACTACTAGAACGA
ACAGTGACATGGAGCTCGTATTCTCTGATGAAGCGTTGGCCATTGTCGTCCCCATAGCTGCCTACTGGGTCTACTCCGGC
ATGTACATGGCGCTTGGACGGTCCATGGACCAGTACAGGCTACACCCAAGGGAGGAGGAGCGCAACAAGAACCTGGTGTC
CAAGCGCGACGTCGTCAAGGGCGTCCTCCTCCAGCAGCTCGTGCAGGCCGCCGTCGCCGCCGCCATTTTCACGGTATA--
AG---AATTCTCCATGCATGGACCTGCAAACATTCATATACATATGATATAAACTTACACAGTCACCGACAAGTACCCAC
T-----------------GCAGCTTCGAGGCGAAAGCACCGGGACGGCCGCCGGCGAAGCACGGCAGCGGACGACCTGGG
CCACGTGCCTGACGGTAGCGATGCAGATCGTGGTGGGCATGTCCATGCTGGACGGGTGGCAGTACGCGTGGCACCGGTAC
ATGCACCGCAACAAGTTCCTGTACCGGCACGTCCACTCGTGGCACCACCGCCTCGTCGTGCCCTACGCCTTCGGTGCACA
GTACAACCACCCCGTGGAGGGCCTCCTCCTCGACACCGGCGGCGGCGTGCTCGCCTTCCTCGCCTCCGGCATGTCGCCCC
GCGTCTCCATCTTCTTCTTCACGCTCTGCACCGTCAAGGGCGTGGACGACCACTGCGGCCTGTGGCTGCCGGGGAACGTG
TTCCGCCTCTGCTTCTGGAACAACACGTTGTACCACGACGTCCACCATCAGCCGCGCGCTAGCAGATACAACTTCTCGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGGACGCACATGCCCTATGTGGTCGAGC---ACAGGCCCCAAGGAGGCC
TCCTCGTGCGGCCCATGGAAGCCCTTAACTAAGCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATT---GTGTTTCATATTTGACTG-TATG
TCACAAACGTATTTATCCTTCCCTCATGCAACCAGGATGCTACTATACATCAGAAATTGATATCCCAAAAAAAGTTCATA
TATAT----------AGGAGCATGTGCATTTCCTGTCGGCGGTGGTTTGTAATATCTGTCATTCGAGCATCTGAGCAATT
TCTTCTTGATGAAACTGGCATGCTT-CAAGG-CCTGGCAGAGAAAACAATTGATACATTTCAATCGCAATAAGCTGCAT-
AAAACTAACACCTTGATTTTCTGTACAACATGCAGCACCACATCAGACTAGATAGTAAAGCTTCATCTTCTGCAAGCTTC
TATTTGGAGATCTGTCTCTACAAAAGTCAGAAAACATCTGCTTCATTCGTGCTAACCGGATTAAAAG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AAAATAGTACTAGGCTAATA
TTCATAGGCAAGTTGTGTCATGTGTGAAACTCTGGCATGCAGCTGAAAGAAATCAGTGTTGCAATTCAGATTAT------
--CTTGTCGGCTTGCCGCTACATGAATGTAGAACATGTTATA---TATATTTTTGAGAGTGTACCCCAGATCCGAGTATA
GAAGATCGAGAGAAAGAATGAAATCTCAGCAGCATCTATCTGAACGAAACCATCATTTATACAACCATGTACTCCATTAA
AGCGAAAGAGTTCTTTTCTTTTTTGAAAAACGAAAGATCACAGTAAGAAAGCGGAGAAGTAAATAAGAGAAGATGCAGAC
CAAGAAAGATAAATATGTGATCAGACAGTATCAAAACATGTTCCAGGTTGGAAGGCAAGTCCAG
>chr4A_612
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------ATGAGGTTTTGAGTCTTTGGGGTTCTCCCTTGGATCGTCACACACAAGCTTA-----TACTAAACG
ACTAAAATCCACACATGGAATGACCGATATG-TTGACTAAATTCCATACGTGGAACGCGTCGGGCTTGAACCAATTTTGA
CTAAATAATAAATTCCTAGGCGCATGGAACGCCTTGCTTGAACGACTTTTGACTAAACTCCGTATGTGGAACGTCTGGGC
CGGGTAAAGCAACAGAATTTCTATGGCTAAGATCTACTAAAATCTTCTCTCGGGGTAAAGAAATATAAGTGCGTTTAGAT
CACTACTTTAAAGATCTAATAAACACTATTATATTTTTTTACGGAGGGAGTAGATGTTTAAG-AGATTCGGAAGAAAGAG
TCCGATGATTACAGCCTTGACAACACTACATATCGGGTCGTATGACAGCGACCAC-------------CATTCTCATCGG
TCGATATA----AACTCACAGCACCAGTG---TACTACCAGACACCGCTAGCAAAAGCAAGCAACGTACTACTAGAACGA
ACAGTCACATGGAGCTCGTATTCTGTGATGAAGCGCTGGCCATTGTCGTCCCCATAGCTGCCTACTGGGTCTACTCCGGC
ATGTACATGGCGCTTGGACGGTCCATGGACCAGTACAGGCTACACCCAAGGGACGAGGAGCGCAGCAAGAACCTCGTGCC
CAAGCGCGACGTCGTCAAGGGCGTCCTCCTCCAGCAACTCCTGCAGGCCGCCGTCGCCGCCACCATTTTCACGGTATGTT
AG---AACTCTGCACGCATGGACCTGCAAACATTCATACATATA-------AACTTACATAGTCACCGACACGTACCTAC
C-----------------GCAGCTTCGAGGCAAAAGCACCGGGACGGCCGCCGGCGACGCACTTCAGCGGGCGACCTGGG
CCATGAGCCTGACGGTGGCGCTGCAGATCGCGGTGGGCATGGCCGTGCTGGACGGGTGGCAGTACGTGTGGCACCGGTAC
ATGCACCTCAACAAGTTCCTGTACCGGCACGTCCACTCGTGGCACCACCGCCTCGTCGTGCCCTACGCCTTCGGCGCGCA
GTACAACCACCCCGTGGAGGGCCTCCTCCTCGACACCGTCGGCGGGGCGCTCGCCTTCCTCGCCTCCGGCATGTCGCCCC
GCGTCTCCATCTTCTTCTTCACGCTCTGCACCGTCAAGGGCGTGGACGACCACTGTGGCCTGTGGCTGCCGGGGAACGTG
TTCCGCCTCTGCTTCTGGAACAATACGGCGTACCACGACGTGCACCATCAGCTGCGCTCTAGCAGATACAACTTCTCGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGGACGCACATGCCCTATGTGGTCGAGC---ACAGGCCCCAAGGAGGGC
TCCACGTACGGCCCATGGAAGCCCTTAGCTAAGCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATT---GTGTTTCAGATTTAACTC-TATG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr6D_1340
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
C-----------------ACAGCTTGTAGGCGAGAGCACCGCGACGGCCACCGGCAGAGCACCGCAGCGGACCTGGACCG
GGACGTGCTTGACGGTGGCGTGCCAGATCGGAGTGGCCATGGCCGTGCTCGACGGGTGGCAGTACGTGTGGCACCGGTGC
ATGCACCTCAACAGGTTCCTGTACCGGCACGTCCACTCGTGGCATCACCGCCTCGTCGTGCCCTACGCCTTCGGCGCCCT
GTACAACCACCCCATCGAGGGCCTCCTCCTCGACACCATGGGCGGCGCGCTCGGCTTCCTCGCCTCCGGCATGTCCCCGC
GCGTCTCCATCTTCTTCTTCACGCTCTGCACCGTCAAGGCCGTCGACGACCACTGCGGCATGTGGCTGCCGGGGAACATG
TTCCACCGGTGCTTCTGGAACAACACGGCGTACCACGATGTCCACCATCAGCTGCGCACTAGTGGATACAACTTCTCGCA
GCCCTTCTTCGTGACATGGGACAGGGTGTTTGGGACGCACATGCCCTATGTGATCGAGGAAGACAGGGCCCACGGTGTGC
TCCGGGCGCGGCCCATGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr4A_1461
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------GGCAGTACGCATGGCACCGGTGC
ATGCACCTCAACAAGTTCCTGTACCAGCACGTCCACTCATGGCACCATCGCGTCATCGTGCCCTGCGCCTTGGGCGTGCA
ATACAACCACCCTGTGGAGGGTCTCCTCCTCGACACCGTCAGCAGCGTGGTCACCTTCCTCGCCCCCGGTATGTCGCCCC
ACGTCTCCATCTTCTTCTTGACACTCTGCACCGTCAAGGGCGTCGACGACCACTACGGGCTGTGGTTGCCGGGGAACGTG
TTCCACCTCTGCTTCTGGAACAACACGGCGTACCACGACGCCCACCATCTATCGCGCGCCGGCAGATACAACTTCTGGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGGACGCACATGCCTTATGTGGTCGAGC---ACAGGCCCCAAGGAGGGC
TCCATGTGCGTCCCATGGAAGCCCTTAACTATGTA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATA-TTGTTTTTCAGATTTGACTG-TATG
TCACCAAAGTATTTATCCTTCACTCATGCAACCAGGATGCTACTATACATCACAAATTGATACCCCAAAAAACTTC----
-ATAG----------AGGAGCTT------TTCTTGTTAGTGGTGGTTTGTAATATCTATCATTCGAGCATCTGAGCATTT
TCTTA---ATGAAAATGGCATGCTT-GAAGGCC-CGGCAGAGAAAAGAAATGCCACAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr4A_1461
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GGCACTACGCATGGCACCGATGC
ATGCACCTCAACAAGTTCCTGTACCAGCACGTCCACTCATGGCACCACCGCGTCATCGTGCCCTGCGCCTTGGGCGTGCA
ATACAACCACCCTGTGGAGGGCCTCCTCCTCGACACCGTCAGCAGCGTGGTCACCTTCCTCGCCCCCGGTATGTCGCCCC
ACGTCTCCATCTTCTTCTTGACACTCTGCACCGTCAAGGGCATCGACGACCACTACGGGCTGTGGTTGCCGGGGAACGTG
TTCCACCTCTGCTTCTGGAACAACACGGCGTACCACGACGCCCACCATCTATCGCGCGCCGGCAGATACAACTTCTGGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGGAAGCACATGCCCTATGTGGTCGAGC---ACAGGCCCCAAGGAGGGC
TCCATGTGCGTCCCATGGAAGCCCTTAACTATGTA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATA-TTGTTTTTCAGATTTGACTG-TATG
TCACCAAAGTATTTATCCTTCACTCATGCAACCAGGATGCTACTATACATCACAAATTGATACCCCAAAAAACTTC----
-ATAG----------AGGAGCTT------TTCTTGTTAGTGGTGGTTTGTAATATCTATCATTCGAGCATCTGAGCATTT
TCTTA---ATGAAAATGGCATGCTT-GAAGGCC-CGGCAGAGAAAAGAAATGCCACAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr7A_1462
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GCAGTACGCGTGGCACCGGTGC
ATGCGCCTCAACAAGTTCTTGTACCAGCGCGTCCACTCATGGCACCACCGCCTCGTAGTGCTCTACGCTTTGGGCGCGCA
GTACAACCACCCTATGGAGGGCCTCCTCCTCGACACCGTCAGCGGCGTGTTCGCCTTCCTCGCCCCAGGTATGTCGCCCC
GTATCTCCATCTTCTTCTTCACACTCTGCACCGTCAAGGGCGTCGACGACCACTACGGGCTGTGGTTGCCGGGGAACGCG
TTCCACCTGTGCTTCTGGAACAACACGGTGTACCACGACATCCACCATCAGTCGTGCGCCAGCAAATACAACTTCTCGCA
GCCCTTCTTTGTGACGTGGGACAAGGTGTTTGGGACGCACATGCCCTATGTGGTCGAGC---ACAGGCCGCAAGGAGGGC
TCCATGTGCGTTCCATGGAAGCCCTTAACTATGTACTCCCTTCGTTCCTTTTTAGTTCGCATATACGATTTGTCTAAAGT
CAAGGCTTGCAAAGTTTGACCAACTTTATATAAAAAATACCAACATTCATAATATGAAATCAATATCAGTAGATGTGTCA
TGACTTAAATTTTCATATTGTATAACTTTAGCCTGGTAGATGTTGATATTTTTCATATAAATATGGTTAGACTTTATAAA
GTTTGACTTCATACAATTTTTATATGCAGAGTAAAAAGAACCGGAGGGAGTATA-TTGTGTTTCAGATTTGACTG-TATG
TCACCAAAGTATTTATCCTTCCCTCATGCAACCAGGATGCTACTATACATCACAAATTGACACCCCCAAAAACTTC----
-ATAT----------AGGAGCTT------TCTTTGTTGGCGATGGTTTGTAATATCTATCGTTCGAGCATCTGAGCATTT
TCTTA---ATGAAAATGACATGCTT-CAAGGCC-CGACAGAGAAAAGAAATGCCACATTTCAATCACAATAAGCTGCAT-
TAAAACAATACTTTGATTTTCTGTACAAC----AGCACCACATCAGACTAGCTAGTAAAGCTTCATCTTCTGCGAGCTTC
TGTTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>SNPs
--------S----------------------------S----S-S-----------------------------------
---S------S-------------SS--------SSSS------------------------S-SS--S-----------
-------------------------S-----------------------S------S------S----------------
------------------------------------------------S-------------------------------
------------------------------------------S------------------------------------S
---------------------S----------------------------S----------------S---------S--
----------------S----SS-----------------------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S--------------
---SSS----------------------------------------S-------------------SSSSS---------
--------------------------------------------------------------S-----------------
---------------------S----------------------------------------------------------
------------------------SSSSSSS-S-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
------------------S--S------SSSS------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--S--------------------S-------S------------------------------------------------
--------------------------------------------------------------------------------
-S-----SS-------------------------------------------------------S---------------
----------------------S------------------------------S--------------------------
-------------------------------------------------------------------------S------
----------------------------------------------------------------------S---------
-----------------------------S--------------------------S-----------------------
---------------------------------S-----------------S---------------S------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------SS----
------S-------------------------------------------------------------------------
-----SSSSSSSSSS-S-S------------------------------S------------------------------
----S-S-----------------------------S-----------------------SS----S--SSSS-------
-----------------------------------------S------------------------S---S---------
---------------------------------------------------------------S---SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
--------------------------------------------S----------------------------SSSSSSS
SS-------S----S---------------------------SSS---------S-------------------------
S-----------S----------------S--------------S--------------------S-----SS-------
-----S-----------S----------------------------------S---------S-------------S---
-------S--------------------S-----------------------------------
>forward_558
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CAGGAAAAGAATCGAGCGGC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_2711
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CGCGAGCTTC
TATTCGGAGT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
