>input_sequence_62996
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--------------------------------------------------GCTTATTCCGGGAGCCAGGTTGGTCGCGGT
CGGACTCGTTTGACAGTGCGTGTTGCCTACCATTCTCTGGCGAATTTGCCAACAGGAATCTGTAATGTC-----------
-CAAGGTGACAAGTAGCTAGTGACCCATGAACCATGATGATGCA----ATATACTGGACTGC---CCTCTGCCTGGATAC
ACACCCACAAGTACTTGGCTCTCTT---------------------------ACGAGCATTAGCAATGGCAAGCATCAGC
GCCACGGCCGTCTTCGTCGCCGCCGGACCGCCACGGTCTCTATGTAAGCAAAAA-GCTTGTCATCC---CCGCAAAAATG
CCGGCCATGTGCAACATGCCGAGTTGCTA---TCTAACAATGGGACGACGCATG---CAGGGCTGCCTCGGCTGAGTGTG
GCCAAGGCCGCG---AGGCTGAGGTGCAGCTGCTCCAAGGACCTCAAGAAGAAGGCTTCTTCGGCCCTGGCTATGGCGGT
GGTCAAGGGCGCGCCGCTGCTCGCTGAGGCGAGCGCCATGGCGGTGGCGGCAGCCCCGGTGCTGGCCCCGGCGCTGGTTC
TGGCGCTGGTGGACGAGCGGGTGTCGACCTACGGCACCGGGCTGAGCCACGACCTGCTGGGGTGGATCCTGATGGTTGCC
TTCGGCCTCGCCTTGTCCTACACCGTCTACTCCTCCATCCTCCAAGACGACAACGACGACGACCAGTCCACCGCCGGCGG
CATCACGATCTGAACACCGCACCGCCACCTTCTTCTTCCGCCAGGCTGATCCGGCCGTCAAAGCTTTGCATGATTACCAT
TGGTCTATGAAGCAGGGACGAATATTGAATCCTAAGCTACTGATTATGGTAGTCGTAC-TTTCTTTTTTTCTTGCGGGCA
GGAGTACTTTCTATGACGGTGTTAAATAGTTGAGTCGATCGTATGCGTGTGACTTTGTATCAAGGATCGGGTGACTTGCC
CATGGCATGTTACCATCGCTGTGCTGTATTAATATGTCGTCTACTTGTCACAAGCCCGGGGTTATACTAATAATCAATTT
ATGTTGTA------------------------------------------------------------------------
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------------------------------------------------
>chr1D_1_TraesCS1D01G328600
ATAAGATATTCAGTGCTGCACCACCCAATTTGAACACCTGGCAATTCTACCTACAGGAAGGGCTGCAACACATCATTCTC
AGGTCAAAGCAAGCCAAGGGCGACAAGATAGATCTGTGGATTGAACAGTTCCTGTAATTTTTTGATTATGTTGCCTAGAG
CTGGTATTGGGTGATTCACCACATGTATTACACTTTTGTACATAATTTTATATTAATGAAAATACCGTAGAACAATTGTT
CTACGGTCACAGGGTCAATTTTTTTTACAACCA-----------------------------------------------
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-------------------------------------------------------------------------GACTCCC
CATACCCGCCTCAAATGTCCGGATGGGCTGTTC-----------------------------------------------
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--GGGCACCCCCGTCACGTCGGATTGACCTGGAGGGCCCGTGCCAATTCGCCGGTATTCATCCTCCCCTCCTTGATACTA
AAGGTCAGCGCCACCAGACTTAAAAGAATTATATGGTCATCGATGTACCCTTTCAGATTCAGATGAAGATGTCGAAAATG
ATCAATAAACTTTTATAAA---AGCAAGGCCATCAATGCTTGCT------TTGTAAGGAACATGGACAGTCTTGATGTAT
CTTCTCAGTTTATGAACAAAGAAGATTCATAGTGACAGTCTACAACCTTCAGAAAAGATACGTTGATGACCGAAGCTAAC
CGCTTTGGGAGGACTCGGCTATTTAAGCCGGTCGCATCACTCCTCGCCGCTCTGCGAGGTGGGACTAAATCGCCGATCAA
GCCGGCCCAACACTGAAATCTTAAGTTTTTACTTATATTTCCTAATTTACTGTTCCTGCAGGAGCATATAAG--------
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--------------------------------------------------------------CTTGCGAGTAGATACTCC
GCGTCCCTGAAAGTCCCTTTATTAGCTCGAGCTCAAATGCTCCTGGTGTGAACACTAAAATATCAAACAATCATACTATT
TGTACCATTTCCGTTATCTGTCTTTCGTCGTCCATTGGTCCCTGTCGTGCCAAATCTATAGCGCTCTTGCTGTGTGTACC
CTGCCTGCCAACCGTGCTGAT-----------------------------------------------------------
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-----------------------TATACCTGACGCCCAACGTCCACAGTTGCTTATTCCGGGAGCCAGGTTGGTCGCGGT
CGGACTCGTTTGACAGTGCGTGTTGCCTACCATTCTCTGGCGAATTTGCCAACAGGAATCTGTAATGTC-----------
-CAAGGTGACAAGTAGCTAGTGACCCATGAACCATGATGATGCA----ATATACTGGACTGC---CCTCTGCCTGGATAC
ACACCCACAAGTACTTGGCTCTCTT---------------------------ACGAGCATTAGCAATGGCAAGCATCAGC
GCCACGGCCGTCTTCGTCGCCGCCGGACCGCCACGGTCTCTATGTAAGCAAAAA-GCTTGTCATCC---CCGCAAAAATG
CCGGCCATGTGCAACATGCCGAGTTGCTA---TCTAACAATGGGACGACGCATG---CAGGGCTGCCTCGGCTGAGTGTG
GCCAAGGCCGCG---AGGCTGAGGTGCAGCTGCTCCAAGGACCTCAAGAAGAAGGCTTCTTCGGCCCTGGCTATGGCGGT
GGTCAAGGGCGCGCCGCTGCTCGCTGAGGCGAGCGCCATGGCGGTGGCGGCAGCCCCGGTGCTGGCCCCGGCGCTGGTTC
TGGCGCTGGTGGACGAGCGGGTGTCGACCTACGGCACCGGGCTGAGCCACGACCTGCTGGGGTGGATCCTGATGGTTGCC
TTCGGCCTCGCCTTGTCCTACACCGTCTACTCCTCCATCCTCCAAGACGACAACGACGACGACCAGTCCACCGCCGGCGG
CATCACGATCTGAACACCGCACCGCCACCTTCTTCTTCCGCCAGGCTGATCCGGCCGTCAAAGCTTTGCATGATTACCAT
TGGTCTATGAAGCAGGGACGAATATTGAATCCTAAGCTACTGATTATGGTAGTCGTAC-TTTCTTTTTTTCTTGCGGGCA
GGAGTACTTTCTATGACGGTGTTAAATAGTTGAGTCGATCGTATGCGTGTGACTTTGTATCAAGGATCGGGTGACTTGCC
CATGGCATGTTACCATCGCTGTGCTGTATTAATATGTCGTCTACTTGTCACAAGCCCGGGGTTATACTAATAATCAATTT
ATGTTGTACTCTTTGTTAAATCATTGTTACTGTCCCCGTCAACACAGCTAGCGCCGTAATGTACAGTAGTGTTCATGATT
TGTATGACCCTGTCACTAACAAGGTCTTTTGCTTCCCTGGTAGTCCAACAAGTGGGGTGGTGGCGGTACCACCCTTCACA
TGCTACCATGCTCCAACTTTGAAAAAGTCACATTTAGATGTTTCAAAAAATTCTAATTTTTTTTGTGGTGTTCACAAGAC
ATGTATATAATCCCTAAAAAATCAGATGAAAATCCGAACACACATTAAGTAACAAAAAAGACAAATCTAGAATGGATAGT
GTCAAATCAAGGCAAAATATGGATAGTGTCAGAAATACCACTATTCAGGTACGGTTTTGTCTTTTTTGTTTCTCAATGTA
CACTTCGAATTTTGATTTGGATTCTTTAGGAGTTATGAACATATGTCCTGTGAACATCCACAATTTTTTTGAAATATCTA
AATGTGACTTTCTAAAATTTGGATCATGGGAACATGTAAATGGTGGTGTCACCTTTTTAGGGGTAAAACCGGGCTTTATT
CATCAAATACCACATCGTGTGGGATAGAGTCCGGGTCGTGGGATTGACCAAACCAAACGTGACGTTCCAGACCTAATGTT
AGTGAGAACCTGGCTAGACTATGTGCTTCGACATTGACAACACGACTTTCAAAAGAAAAAATACAATCAATAAAAGATGT
TTGTAACTTAATCTCACTATTATTGCTCCGTTGCTTCCTCTACTCCCACTTTGAAAATCACGAATCACCTGTTTAGTGTC
AGACACAATGACAATACGGTGGAGATGGAGATCTTCTGCCAATGCCAAAGCCTCCCTGCATGCGGTAGTCTCCAAGGCCA
CTGGATCATCCATGCCTCCAATTACAATAGAGCCACTGCCCCTGAATCATCAAGTGAAATGAGCAACTCTGAGCCTGGTC
CTTCTTTTTTTTAGTGGCTCCTCTATTCCTCTCTCCCTGCTCCTCTGC
>chr1A_264
CTAGCTAACAACGAGACGCTGCATGCAGGGCTGCCTCGGCTGAGAGTGGCCAAGGCCGCGAGGCTGAGGTGCAGGTGCAG
CTACTCCAAGGACCTCATGAGAAAGGCGTCTTCAGCTCTGGCTCTGGCGGTAGTCAAGGGCGCACCCCTGCTCGCTGAGG
CGAGCGCCATGATGGTGGCGACGGGCCCAGTGCTGGCCCCGGTGCTGGTGCTGGCGCTGGTCGACGAGCAAATCATGCCA
ACGGAAGGTGCCGGGTTGAAGAATGACCTGCTTGGGTGGATCCTGGTGGTTGCCTTGGGCCTCGCCTTGTCCTACACCGT
CTACACCTCCATCCTCGATGACGACGACCAGTCCAGCGCCGGTGGCATCACGACCTGATCATACCGTCATATTCTTCTTC
TGCCTGCCGGCCTCATGCGTGAAAGCTTTGCGTGATTTACCATCAACCTATGAAGCATGGATGAATATTGAATACCGAGC
TATACTAATTATGGTATAGTAGTACTATGATGACAATGTTAAATACTACTTCCTCCGTTCTTAAATATTTGTCTTTCTAA
ACATTTCAAATGACTACTACATACGAATATACGTAGACATATTTAAGAGTGTAGATTCACTCATTTTGCTTCGTATGTAG
TCACTTGTTGAAATGCCTAGAAAGACAAGTATTTAGAAACGGAAGGAGTAGTAACTAGTACTCCCTCCGTAAAGAAATAT
AAGTGCTCTTACATTTCTTTACGGAGGGAGTACCAGTTGCAGTCGTACTGGGTGTGACTTTGCAACGCGGATCTCCTTGC
CACTATGCATGAAGCAAGTTCAGCGCTAGTAGCTGTATTAATCTATCGTCTAGTTGTGAGTTGTCACGGGCAAGGGTTGT
AATAACTAGTTTAAGCTGTGTTATCACATCATTATACTAGCCCTGTCATCAGCAAGGACGTTTGTTTCGCTTCTTGGACA
ACAAGTGAGCTGAGCGCAGTTGGCAAGCTCCTACATCTCATAGCTGAGCTCGAGAGTTCGAGCCACCCCACACCCGAAAA
AGACCATCGTTGTGATGAAACGCTCCGTGGCAACTTGGGTCGCCGCATGTACACCTGAATCTTCAGGTGATATTGAGCAA
ATCTGAACCTTGGTCTCTTCCTTTTTTTGTTTTTTTGTTTTGAAGGTCGTTGGTAGCTCCACTCCTGAAGTGGACTGGGG
AAGTCTAAATTATCCTTTTTGTACCTCTGTCATCAGTTCCCACCTGCTCGTCCTGCCCCAGGCACTGATTTATTTTGGAT
TCAGAAATGCTATTCTCCTGCGTATACTTTTACAAAAACTTTTACGTATTCAAAGAGGGATAGTAATTAACCACCCTGGA
GCTAGACATGGCAATAACCGTCATTCGATTGTACTGGTGCGTACGATTTTTGCAGATGGGTTACAAAAAATAGGATTGCT
CTTTTTGATCTACGCCTGTAAATTTGGGTGTTGAAGAAATGGGAGTACCTTCATTTGTCCTTACACCAGTATGAACCACT
CGGATAGAGCTGGGTACTCTATTCTTCATCTTTAAGAATCCACTAATATAAGATGTAAGAGCATTCACAACCGGACTCCC
CATACCCGCCTCAAATGTCCGGATGGGCTGTTTGGTCAGTGTCCGGGCGCAAAAACGCCACCCATTCAGGCTCCCCACAA
CCGGCCCCAAAGCCGGGACTGACCGCCACTCCTCATATTCAGCCCAAATCTAAGCCGGATATGGGAACGCCCAGACGCGT
TTGGGCACCTCCGTCACGTCGGATTGACCTGGAGGGCCCGTGCCAATTCGCCTGTATTTGTCCTCCCCTCCTTGATACTA
AAGGTCAGCGCCACCGGACTTAAAAGAATTATGTGGTCATCAATGTACACTTTCAGATGAAGATGAAGATGTCGAAAATG
ATTAATAAACTTTTATAAA---AGCAAGGCCATCTATGCTTGCT------TTGTAAGGAACATGGACAGTCATGATGTAT
CTTCTCAGTTTATGAATAAAGAAGATTCATAGTGACAGTCTACAACCTTCAGAAAAGATATGTTGACGACCGAAGCTAAC
TGCTTTGGGAGGACTCGGCTATTTAAGCCGGCCGCGTCACTCCTCACCGCTCTGCGAGGTGGGACTAAATCCCCAATCAA
GCCGGCCCAAC-----------------------------------------ACTGTTCCTGCAGGAGCATATAAGC---
--------------------------------------------------------------------------------
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---------------------------------------------------------------TTGCGAGTAAATACCCC
GAGTCCCTAAAAGTCCCTTTCTCAGCTCGAGCTCAAATGCTCCTGGTGTGAACACTAAAATATCAAACAATTCTACTATT
TGTACCATTTCCGTTATCTGTCTTTCGTCGTCCATTGGTCCCTGTCGTGCCAAATCTATAGCGCTCTTGCTGTGCGTACC
CTGCCTGCCAACCGTGCTGAT-----------------------------------------------------------
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-----------------------TATACCTGACGCCCAACGTCCACAGTTGCTTATTCCGGGAGCCAGGTTGGTCGCGGT
CGGACTCGTTTGACAGTGCGTGTTGCCTACCAATCTCCGGCGAATTTG-CAACAGGAATCTGTAATGTCCAAATTCCAAT
GCAAGGTGGCAAGTAGCTAGTGACCCATGAACCATGATGATGCAATATATATACTGGACTGC---CCTCTGCCTGGATAC
ACATCCAAA--TAATTGGCTCTCTTACGATCAGAGAGCGCTACACAT---CTACAAGCATTAGCAATGGCAACCATCAGC
GCCACGGCCGTCTTCGTCGCCGCCGGACCGCCGTGGTCTCCAGGTAAGCAAAAA-GCTTGTCATCC---CCGCAAAAATG
CCGGCCATGTGCAACATGTTAAGTTGCTACTAACTGACAATGAGACGCTGCTGCGCACAGGGCTGCCTCGGCTGAGAGTG
GCCAAGACCGCGAGCAGGCTGAGGTGCAGCTGCTCCAAGGACCTCAAGAATAAGGCTTCTTCGGCTCTGGCTATGGCCGT
GGTCAAGGGCGCGCCGCTGCTCGCTGAGGCGAAAGCCATGGCGGTGGCGGCGGCCCCGGTGCTGGCCCTGGCGCTGGTTC
TGGCGCTGGTGGACGAGCGGATGTCGACCGACGGCACCGGGCTGAGCCACGACCTGCTGGGGTGGATCCTGATGGTTGCC
TTCGGCCTCGCCTTGTCCTACACCTACTACTCCTCCATCCTCAAAGACGACAACGACGACGACCA-CTCAGCGCCGGCGG
CATCACGATCTGAACACCGCACCGCCATCTTCTTCTTCCGCCTGCATGGTTACCAGTGATATACG---------------
-----TATGAAGCATGGACGAATATTGAATCCTAAGCTACTGATTACGGT------------------------------
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------------------------------------------------
>chr1B_384
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------------------------------------------------------------------------TGCTACTA
AAGGTCAGCACCACCGGACTTAAAAGA----TATGGTCATCGATGCACCCTCTCGGGTTCAGATTCAGATGCCAAAAATG
ATTATTAACTTTTAACAAATTAAGCAAGGTTATCAATGCTTGCTTTGTAATTGTAAGGAACATGGACAGTCATGATGTAT
CTTCTCTGTTTATTAACAAAGAAAATTCATAGTGACAGTCT-CAACCTTCCGAAAGGATATGTTGATGACCAAAGCTAAC
CGCTTTGGGAGGACTCGGCTATTTAAGCCGGCCGCGTGGCTCCTCGCCGCTCTGCGAGGTGGGACTAAACCCCCAACCAA
GCCGGCCCAACACTGAAAATCTTAAGTTTTTACTTATAC---TTTCTAATTTATGGTTCATGCAGGAGCATATAAGC---
--------------------------------------------------------------------------------
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---------------------------------------------------------------TTGCGAGTAGATACTCC
GCGTCCCACAAAGTCTCTTTCTCATCTTGAGCTCAAATGCTCCTGGTGTGAA---TAAAATATCAAACAGTTGTACTATT
TCCACCATTTCTGTTATCTGTCTTCCGTCGTCCATTGGTCCCTGTCGTGCCAAATCTGTAGCGCTCTTGCTGTGTGTACC
CTGCCTGCCAACCGTGCTGAA-----------------------------------------------------------
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-----------------------TATACCTGACGCCCAGCGTCCACAGTTGCTTCTTCCGGGAGTCAGGCTGGTTGTGGT
TGGACTCGTTTGACAGTACGTGTTGCCTACCAATCTCTGGCGAAATATCCAAAAGGAATCTGTGATGTC-----------
-CAAGGTGGCAAGTAGCTAGTGACCCATGAACCATGATGATGCA----ATATATATACTGGATTGCCTCTGCCTGGACAC
ACACCCACAAGTAATTGGCTCTCTTACGATCAGAGAGTGCTACACAT---CTACGAGCAATAGCAATGGCAACCATCAGC
GCCACGGCCGTCTTCGTCGCCGCCGGACCGCCGCGGTCTCTAGGTAAGTAAAAA-GCTTGTCATCC---CCGCAAAAATG
CCGACCATGTGCAACATGTTAAGTTGCTA---ACTGACAATGAGATGCCGCATG---CAGGGCTGCCTCGGCTGAGTGTG
GCCAAGGCCGCGAG---GCTAAGGTGCAGCTGCTCCAAGGACCTCAAGAATAAGGCTTCTTCGGCTCTGGCTCTGGCGGT
GGCCAAGGGCGCGCCGCTGCTCGCCGAGGCGAGCGCCATGGCGGTGGCGGCCGCCCCGGTGCTGGCCCCGGCGCTGGTTC
TGGCGCTGGTGGACGAGCGGGTGTCGACCGACGGCACCGGGCTGAGCCACGACCTGCTGGGGTGGATCCTGATGGTTGCC
TTCGGCCTCGCCTTGTCCTACACCGTCTACTCCTCCATCCTCGAAGAGGACAACGACGACGACCAGTCCAGCGCCGGCGG
CATCACGATCTGAACACCAGACCGCCA-----------------------------------------------------
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------------------------------------------------
>chr1D_770
CTAACTAACAACGAGACGCTGCATGCAGGGCTGCCTCGGCTGAGAGTGGCCAAGGCCACGAGGCTGCGGTGCAGGTGCAG
CTACTCCAAGGACCTCGTGAGAAAGGCGTCTTCGGCTCTGGCAGCTCTGGCGGTAGTCAAGGATGCACCTCTGCTCGTTG
AGGCGAGCGCCATGATGGCGGCGACAGGCCCAGTGCTGGCCCCGATGCTGGTGCTGGCGCTGGTCGACGAGCGGATCATG
CCAATGGAGGGTGCCGGGATGAACAACGACCTGCTGGGGTGGATCCTGGTGGTTGCCTTGGGCCTCGCCTTGTCCTACAC
CGTCTACTCCTCCATCCTCGACGACGACGATGACGACGACCAGTCCAGCGTCGGTGGCATCATGATCTGATCACACCGCC
ATCTTCTTCTTCTGCCTGCCTGCCTCATGCGTGAAGGCTTTGAGTGATTTACCATCGACCTATGAAGCATGCATGAATAT
TGAATATTGAGCTAATTATGGGTATAGGACTATAGGAATACTATGATGCCAATGTTAAATACTAGTACTAGTTGCAGTCG
TACCGGGTGTGACTTTGTAACGCGGATATCGTTGCCACTATGCATGAAGCGAGTTCAGCTGTATTAATCTATCGTCTAGT
TGTGAGTTGTCACGGGCAAGGGGTTGTAATAACTAGTTTAAGTTGTGTTATCAGTTATCACATCATTATATATAGTAGCC
CTGTCACTAACAAGGACGTTTGTTTCGCTTTCTTGGACAACAAAGGGGCGGTGGCGCAGTTAGCAATCTCGTAGGTCGCA
TGGCTGAGGTCGAGAGTTCGAGCCATCCTCACCCCATACTTGAAACGACCATGGTTGTGATGAAACGCTCTGTTCAGGTG
ATATTGAGCAGGTCTGAACCTTGGTCTCTTTCTTTTTTCTTTTTTGTTTTGAAGGTAGTTGCTAGCTGTAGCTCCACTCT
GAACTGGACTGGGGGAAGTCTGAATTATCCTTTTTGGACCTCCGCCATTCCTCTCTCCCTGCTCGTCTGCCACCCCAGAA
CTCTACTCCTCTCCCTAGCATCAGTTCCCACGTCCTGCCCAGGCACTGATTTATTTTTGATTCAGAAATGCTATTCTTAC
GTATACTTTTACAAAAACTTTTACGTACTCGAAGAGGGATAGTAACCACCCAGGAGCTAAACATGGCAATAACCGTCATT
CGATTGTACTGGTGCGTAAGATTTATGTAGATGTGTTGCATAAACATAGCATTGCTCTTTTTGATCTACTCCTATAAATT
TGGGTGTTGAAGAAATGAGAGTACCTTCATTTGTCTTTGGACCAGTATGAACCACTCGGATAGAACTAGGTACTCTATCC
TTTATCTTTAAGAATCCACTAATATAAGATTTTAGAGCATCTACAACCGTACTCCTCATACCCGTCTCAAACGTCCGGAT
GGGCTGTCCGGACGCAAAAACGCCACCCATTCGAGCTCCCCACAACCGACCCAAAAGTCGGGACTGGCCAACACTCCCCA
TATCCAATGCAAATCTGAGGCGGATATGGGGACGCCCATACGTATTCGGGTACACCCATCACGTCGGACTAATCGGGAGG
GCCCGTGCCAATTCGTCTGTATTCCTCCTCCCCTCCTTGCTACTAAAGGTCAGTGCCACTGGACTTATTATACGTGGTCA
TCGATGTACCCTTTCAGAGATTCAGAATCAGATGTTGAAAATGATTAATAAACTTTTAAAAAAGCTAGGCCATCAATGCT
TGCTTTGTATGAAACATGGACAGTCATGATATATCTTCTCTGCTTATGAACAAAGAAGATTCATAGTTCAGAAAGGATAT
GTTGATGACGGAAGCTAACCA-----------------------------------------------------------
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--CTTTGGGAGGACTTGGCTATTTAAGCCGGTCGCGTCACTCCTCGCCGCTCTACTAGGTGGGACTAAACCCACAACCAA
GCCGGCTCAACATTGAAAATCTTAAGTTTTTACTTATACTATTTTCTAATTTACTGTTCATGCAGGAGCATATAGGCCCT
GTTTGTTTGGCCTTTTACTTTTGCTTTTACAGTTTTTCCACTTTGGCCAAAAAGCCACAGCAGCTCCTAAATATATGCTT
TTGGAACCAAATATTGTTATATTGGTTCATCAAAAGCCATAAAATCTTCAAAAGCACCTATTTACGAGTTTTTATGACTT
TTTGGTCAAAATGAAAAGGCTGCAAAAGCTGAAGTGAAAGCCCAAACAAACAGTGTCATAAGCTTCCGAGTAGATACTCC
GCGTCCCTCAAAGTCTCTTTCTCAGCTCGAGCTCAAATGCTCCTGGTGTGAA---TAAAATATCAAACAATTATGCTATT
TGTACCATTTCCGTTATCTGTCTTTCGTCGTCCATTGGTCCCTGTCGTGCCAAATCTATAGTGCTCTTGCTGTGTGTACC
CTGCCTGCCAACCGTGCTGATTATACCTCAGCCTGGACGTGACGAGCGGCTTCTGGCCCGGCTCGTGGCCCGTTATGGAC
CGGACCGTACGGTCCTGGCCCGGTAGAAAAAATGGTCGGGCCGAGCTCAGCAATTAGGCCCGACAAACTCTCGGTCCGGT
CCGGATTTTGACCGAGCCCCCGAGGAGGACCGACAAAACGCAGTCACCACGGTTGTCGTTCCTCATCGTCACGGCCGGCA
ACCCCCGAGCGAACCACCGCGTCTCCGAGCACCGCCGCATCCCCATCTTCCTGCCTGTGCGATGAATTGGTCCAGAACGC
CGCCTACACGACGCACGCATCCTCTCTTCCCCGACCAAGGCCGCCGTCTGCCGCCATCAATTTTGTCGCAGTCGTCAAGT
CCCGGCCTTACTGACGTGACGAAGCAGTCCAACCTGTGCACGCAGGCACGCAGGGCACGAACTGTATCTCATTCTTTGCC
CGTCGTGTCGGCGAACACTCTTGAATAAATCCGAAGCTCCTGTCACGTTTTCAGTTAGTTCAGTTAGCACTTTGGTTTTT
CGTCAGGTTAGGCTCGAACACTTTCCTTCTGTTAGCTAGTTTAGCTCGCGGGTCTAACTGCCTGGAGCCAGACTCGCGCC
TCGTCGGTCTGCTCGTGGAACGGCACCAGTGTTGTGGATCACGACGACGAAAGTCAGGGGCCACGAAGCCTTGTTTCCCG
TTCTGTTAGTCTGACTAATAGAACAGAAAAGGTCTGAAGTTTGTGCAGCGCAAAACACCTGTATCTTCCTTTTTTTTCTT
CAGCAATCTCTCGTTCGCGTGGGTTCGTTCCAAGGGCACCTCTGGTGCAGACAAACACGTTGGAGAACACACACACGTTG
GTGTGCCCCGTCTTGTTCCCCATGAACTGGAAGTTGATCTCGTCATGATTGTCCCAATGTCTGAATTTGGCAATTAATTG
ACGCACATATAGTTAGAATTGCATGCAGTACAAGCTGATTAGCAATCTGAAACTGGAAGCGCCGATGTGCTGACGGTAAC
GGTGCCGACGGGCGGCGGAGTTCTCCAGGACGAGCTTGATGTTGGCAGAGATGCTACCATAGATGAACTGCCTCTTCGTC
TGCAGCAAGCAGCCGGAGTAGTTGATCTTTAGGACAGGGCACGACACAGACGAACGCAGACGGGCGCAAGGCACACACGC
AGCTCACGTTCACCCTCCATCGCTCGGTCCCTCGGTCCTGACCGAGCTTTCTCCTCGCCGGTCCGGTCCAGGGAAACAGG
CCCGCTGGGCACTTCGGTCCGGTCCGGTCCGGACCGGTCGCGGCCGGTCCAAAGCACGGCTCGGTCAGGGACCGGACCGG
CTCGGACCGTGTCCACCCTGAATTATACCTGACGCCCAACGTGCACAGTTGCTTCTTCCGGGAGCCAGTTTGGTTGTGGT
TGGACTCGTTTGACAGTGCGTGTTGCCTACCAATCTCTCGCGAATTTTGCAACTAGAATCTGTAATGTC-----------
-CAAGGTGGCAAGTAGCCAGTGACCCATGAACCATGATGATCCA----ATATATATACTGGACTGCCTCTGCCTGGATAC
ACACCCACAAGTAATTGGCTCTCTTACGATCAGAGAGCACTACACATCTACTACGAGCATTAGCAATGGCAACCATCAGC
GCCACGGCCGTCTTCGTCGCCGCCAGACCGCAGCGGTCTCCAGGTAAGCAAAAAAGCTTGCCATCCCCGCCGCAAAAATG
CCGGCCATGTGCAACATGTTAAGTTGCTA---ACTGACAATGAGATGCTGCTGCGCACAGGGCTGCCTCGGCTGAGGGTG
GCCAAGGCCGCCAG---GCTGAGGTGCAGCTGCTCCAAGGACCTCAAGAAGAAGGCTTCTTCGGCCCTGGCTATGGCGGT
GGTCAAGGGCGCGCCGCTGCTCGCTGAGGCGAGCGCCATGGCGGTGGCGGCGGCCCCGGTGCTGGCCCC-----------
-GGCGCTGGTGGACGAGCGGGTGTCGACCGACGGCACCGGGCTGAGCCACGACCTGCTGGGGTGGATCCTGATGGTTGCC
TTCGGCCTCGCCTTGTCCTACACCTACTACTCCTCCATCCTCAAAGACGACAACGACGACGACCA-TCCAGCGCCGGCGG
CATCACGATCTGAACACCACACCGCCATCTTCTTCTTCCGCCTGCCTGATCTGGCCGTCAAAGCTTTGCATGATTACCAT
TGGTCTATGAAACATGGACGAATATTGAACCCTAAGCTACTGATTACGGTAGGAATACTTTTATTATTATTTTGCGAGCA
-GAGTACTTTCCATGACGGT------------------------------------------------------------
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------------------------------------------------
>SNPs
S---SSS-SSSS-S-SS--SS--SS--SSSSSSS-S-SSSSS-SSSSSS--S-SSSS-S-S-SSSS-SSSSSSSS-S-SS
SSSSSSS-SSS-S-SS-S-SSS-SSSSS-SSSSSSS-SSSSSSSSSSSSS-SSSS--SSSSSSSSSSS--S-----SSS-
-S--S-SS-S-SSSS-SS-S--SS-SSSSS----SS--SS-S-S--SS-SSSSSSSSSSSSSS--SSSSS--SS--SS-S
-S-SS-SSSSSS--SSSSS-SSS-SSS--S-SS-----------------------------------------------
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---------S------------------------------------------S-----SS--------------------
---------------S----------------------------------------------------------------
--S--------------------------------------------------------------------S--------
------------------------------------------------------------S-------------------
-----------------------------------S-----------------------------------S--S-----
------------------SSS-S-SS----SSS-SSSSS-SS-SSS-S-S-SS-SS-S--S-SSSSSSS-SS--------
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--------S-----------S-S------------------------------------------------S--------
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--------------------------------S-----------------------------------------------
--------S-----------------------------------------------------------------------
-------------S----------------------------------------------------------S-------
--------------------------------S---------S-------------------------------------
------------------SSS-----------S--S------S----S--------------------------------
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---------------------------------------------------S----------------------------
-----------------------------S--------------------------------------------------
------------------------------------------S---------------------------S---------
---------------------------S--------------S-S------S----------------------------
--------------S-------------------------------S-----SSS-------S--S--S-S-----S---
S----------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1819
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---------------------------------------GTGCCAATTCGCCGGTATTC---------------------
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>reverse_5020
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-----------------------------------------------------------TCAAGGATCGGGTGACTTGC-
--------------------------------------------------------------------------------
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------------------------------------------------
>forward_2152
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----------------------------------------------------TGCGAGGTGGGACTAAATCG--------
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>reverse_5080
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---------------------------------------TCTACTTGTCACAAGCCCGG---------------------
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>forward_5067
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-------TGTTACCATCGCTGTGCTGT-----------------------------------------------------
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------------------------------------------------
>reverse_6106
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-------------------------TTCCTCTCTCCCTGCTCCTC---
