>input_sequence_21870
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-------------------------------------------------------------------ATGGAGTCGCTGC
CGCGGAAGCGCAAGGGCGCGCGCTCCCTCGCCGGCTCCCTCCACGACGCCTCCGCGGACCGCAAGCGGACCTGCCGGGAG
CGGAAGCCGCGCCCCGACAAGAAGAAAAAGAAGCCCTCCGCCGCCGGCGATGACGCCGCCACCGCCTCCGGCCGGGGCGG
CGTGGTCATGACGGCGCCGCCGGCCAGCGGCCGGGCCACCCCGGACAGCCCCGGCCGGGGCCTCAAGCGCAAGGTCGGCT
GCATCGAGTCCGCCACGCGCATAGGCCGCAAGAAGCGCCTCGAGACCGAGTACGAGCTCGGCGACGAGATCGGCCAGGGC
AAGTTCGGCTCCGTCCGGATCTGCCGCGCCAAGGCCGGCGGCGAGGAGTTCGCCTGCAAGGCGCTCCCCAAGAACGGCGA
GGAGACGGTCCACCGCGAGGTCGAGAT--------CATGCAGCACCTCTCCGGCCACCCCGGCGTCGTCACGCTCAAGGC
CGTCTTCGAGGACGCCGACAAGTTCTACCTCGTCATGGAGCTCTGCAGCGGCGGCCGCTTGCTCGACGAGATGGCCAGGG
ACGGCACCTTCTCCGAGCAGCGAGCCGCCCTCGTCATCAAGGATCTAATGTCGGTCGTCAAGTACTGCCACGAAATGGGC
GTCATCCACAGGGACATTAAGCCGGAGAATATTTTGCTCACCAAGACTG-GCAAGATGAAACTAGCTGATTTTGGATTGG
CAGCACGAGTTACTAACGGTAAATTCTTGCTGATATTTCACTTTGAAGCTCTACTAGATGATAAATAA---GTTGGGTTC
CTGGGGGTACTCTATGTTTACACAAGTTGCAATTTTGATTTGCTTTATATGACAAAAAAGACATCAATTAGAAGTAGTAG
AAGATCGACTGGA--------------CCATACAAGGTTTTATAATCTTTAATG---ATTAGTATGGTGTTACAACATTT
AGAATTGATGGTTGTACATAGTTGATCTGCGATGCGAGTAATTTGCCATGTTAACTGGATTACGGCGGGTTTCAGGTTTC
AATCA---CACAGCATTTTTACAGGTTGCTCATCTTTGTGACCATGCATATCATCTAATCTAATGTGT--TAAACTTCTA
AACAAGTCAGTTGGATAGCTTTTGATTTTTGAGTCAGAAAGTTGGTAGGAAATTTATTCATGTGTCTTCTCCTCTTGCCT
GATATGCTTAGAGAATGGGGGTGATTTGAATGGAGTCTCAAAGTCAGAGCGCCTATGCCTGGAAACTCTTTGTGCATTCA
CCTGCAAGTATCTATATGTATAGTGTGAGACCCAATATAGCACTCTTAAAGTACTGAGCATTTCAGACCATTTCATGTTT
CATACTTACACAGTCGATACTGATTGTATTCACTGAATTGGGCCACTTGGTTATGATGGTTGTGTAACTAATAAGATAGT
ACCAGTTCTGCATCAAGAGTTAGGCGCTCTCATTTCTTAAGTCATTGCGGAGTCGGAAGTGGTGAATGTTTCGCTCAGAT
TCTTGTTTAAATGATGATTTCTACATGCCGATTCAGTGTTTTGCATGGTATTGCGAATGAAGAAATGTTCTGTGTCGTCC
CA-TTAATATGTTAAGGTT--TTTTTAGTCATGAATTGGTAGCATGTGGTGCCTTCATTGGTACTAATATTTTGCTAGAT
ATCCAAGGTAATTGAGGCATTGCGCTAATTGATAGTTGGTTTCATTCTACTTATGGTGGTACTGATACTAA-TTTTCTTA
TTTGCGTGGAATTTGGATGTTAAGAATCTACACTGATCAATTTAATCCTTGTATTGATATTAATTTATGGCATGCTCCTG
CAAGTACCTGTTGTGATAAGTCTGAGGGCCAGAATAGTCTTCTTGAGCATACCAAACAGGCTGTGTAATATTTTGAATAT
GGTCTTGAGTCATTTTGATGAATTAGGAAGTGGTGTGATGTCTGTCTGAATGGAGTCATATAGTCTATGAGTTGGAGTTG
TCAGCATGGCTTCAGGGGCACTGGTTCTTATAAACAGCTGCTTATATTTTGTAAGGTAATATTTAGATTATAGTAATTCT
GCAGTATTTATCTATTGTTACCCATGTCTCTATCCTCTGTTCCAACTCTAGTTATCAGTTATCGCTCT-------AATGC
AATGCAGTAAGCCACTGCTGTCTTATTACTTCTTATTAGACACTTACAAATTCAGTTCA-GAGTCTCTTCTGTCATGCTA
GAGTGATGCATGCGTTGTCTTAAAACTTCACTGACACTGCCCTAGGCTAAAAACAAATACATCCCATGGTGCTGAGGTGG
AGCAGAATGAGAGAAATT-AGCCGCATGAACATTGAGTGACGGACAGTTTATCTAATGCCGCAATGCTCTAAACCTAGCA
AATGGTGATAAGT----------------CTGTACGATATTTTACCTTATGCATTGAAGTTCTAAGAATCCAGTATCACC
TAATTTGTGCTAAGG----------------------G---------------------ATGCTATTTTGTTTAGTCTGT
TATGTTTGTATAATTGACTACACTTTGGTTCCTGAATAGCCCCAAATCATCTTTTTAGGGTTTTACTTGGACAGTC-AGA
TGTATAAATGTGTGTTTACTAGAAGTAGCTGATGTTTTTGGTCACCACTAAACAGGTCAGAAATTGTCTGGCGTTGCTGG
GAGCCCAGCCTATGTGGCGCCTGAGGTGTTGTCAGGAAGCTATTCTGAGAAAGTAGACATATGGGGTGCTGGGGTGCTCC
TCCATGTACTACTGCTTGGTTCACTTCCATTTCAAGGGGGCTCTCTGGAAGCTGTCTTTGAAGCTATAAAGACAGTTGAG
CTTGATTTCAACAGCGGTCCATGGGAATCAATGTCAGTTCTTGGACGGGATCTTATAAGTCGAATGTTGGATCGAGATGT
CTCTTCTAGAATGACTGCTGATCAAGTTCTTTGTAAGTCCAGGCAGTTTCTCATCCAGCATAACTTTATGTATAT-TTT-
ATAAGGTTTTAATTAATTTATTGATGATACTATTTCAGGTCATCCATGGGTGTTGTTTTACACGGAATGTACCCTGAAGG
CTGTAACTCCTAATGTCACTAACCAGATTGTAGCACCCAAAATTCCATGGGACAGAATTAGATCACATTCTGAGTCGTCA
GCTTCAGATTCGTCGAGCCAGAGGTCGGAGGACCAGGATGAATGTGGCATAGTCGACGCACTGACTGCGGCAATAACACA
TGTTAGAATATCGGAGCCGAAAAGAACCCGGCTTTGCAGCCCTGGCATTCCCATACAGCAGGAATGCTCCTCAAACTTAA
AGAGCAACCTGTGCACGGCGTTCTGA------------------------------------------------------
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>chr5B_1_TraesCS5B01G243700
GTATCCTTCCAGAACCCTCCGTC----GTGAGAAAAAATCTGACCGCGCAGCGCACAATCGCCATCAGCCGCGGCATCAA
ATCGGGGC-GATAACCGCACCCGCACCGGAACCGGCAAAAGCCCAGGCGACGGAACGTCGCGTGATTTCCCCG-----CA
GACCACCACCGTCACCCACCCGTCCGGCACCGCTCCATCGCGCACGTCTGCCCGTACGCGTCCA----------------
-GCCCGAACCGTGCCCGCCTTTCCCTTCTCTTCCTCCCGTGCTCCTCCCGAGCGGCCGAACCGACACCGAGACGACGCCA
GCCCCCACCCGCGGGAGGGAGGGACACGAGTCCAACAAAGGCGGCCCCTACCCCCACCCCCATCCCCACCACCACCGTCC
TCATCTCCTCCTCGAGCCCCTCCCCCCCTCCTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCTCCGCATCTCGCCACCAACCTCCCACCCGA
TCCCCAACCCCATGATCCGCAGGAGGCGCGGGCACGCCGCCTAGGGTTTCCACTCCCCTTCCCCCCGATGGAGTCGCTGC
CGCGGAAGCGCAAGGGCGCGCGCTCCCTCGCCGGCTCCCTCCACGACGCCTCCGCGGACCGCAAGCGGACCTGCCGGGAG
CGGAAGCCGCGCCCCGACAAGAAGAAAAAGAAGCCCTCCGCCGCCGGCGATGACGCCGCCACCGCCTCCGGCCGGGGCGG
CGTGGTCATGACGGCGCCGCCGGCCAGCGGCCGGGCCACCCCGGACAGCCCCGGCCGGGGCCTCAAGCGCAAGGTCGGCT
GCATCGAGTCCGCCACGCGCATAGGCCGCAAGAAGCGCCTCGAGACCGAGTACGAGCTCGGCGACGAGATCGGCCAGGGC
AAGTTCGGCTCCGTCCGGATCTGCCGCGCCAAGGCCGGCGGCGAGGAGTTCGCCTGCAAGGCGCTCCCCAAGAACGGCGA
GGAGACGGTCCACCGCGAGGTCGAGAT--------CATGCAGCACCTCTCCGGCCACCCCGGCGTCGTCACGCTCAAGGC
CGTCTTCGAGGACGCCGACAAGTTCTACCTCGTCATGGAGCTCTGCAGCGGCGGCCGCTTGCTCGACGAGATGGCCAGGG
ACGGCACCTTCTCCGAGCAGCGAGCCGCCCTCGTCATCAAGGATCTAATGTCGGTCGTCAAGTACTGCCACGAAATGGGC
GTCATCCACAGGGACATTAAGCCGGAGAATATTTTGCTCACCAAGACTG-GCAAGATGAAACTAGCTGATTTTGGATTGG
CAGCACGAGTTACTAACGGTAAATTCTTGCTGATATTTCACTTTGAAGCTCTACTAGATGATAAATAA---GTTGGGTTC
CTGGGGGTACTCTATGTTTACACAAGTTGCAATTTTGATTTGCTTTATATGACAAAAAAGACATCAATTAGAAGTAGTAG
AAGATCGACTGGA--------------CCATACAAGGTTTTATAATCTTTAATG---ATTAGTATGGTGTTACAACATTT
AGAATTGATGGTTGTACATAGTTGATCTGCGATGCGAGTAATTTGCCATGTTAACTGGATTACGGCGGGTTTCAGGTTTC
AATCA---CACAGCATTTTTACAGGTTGCTCATCTTTGTGACCATGCATATCATCTAATCTAATGTGT--TAAACTTCTA
AACAAGTCAGTTGGATAGCTTTTGATTTTTGAGTCAGAAAGTTGGTAGGAAATTTATTCATGTGTCTTCTCCTCTTGCCT
GATATGCTTAGAGAATGGGGGTGATTTGAATGGAGTCTCAAAGTCAGAGCGCCTATGCCTGGAAACTCTTTGTGCATTCA
CCTGCAAGTATCTATATGTATAGTGTGAGACCCAATATAGCACTCTTAAAGTACTGAGCATTTCAGACCATTTCATGTTT
CATACTTACACAGTCGATACTGATTGTATTCACTGAATTGGGCCACTTGGTTATGATGGTTGTGTAACTAATAAGATAGT
ACCAGTTCTGCATCAAGAGTTAGGCGCTCTCATTTCTTAAGTCATTGCGGAGTCGGAAGTGGTGAATGTTTCGCTCAGAT
TCTTGTTTAAATGATGATTTCTACATGCCGATTCAGTGTTTTGCATGGTATTGCGAATGAAGAAATGTTCTGTGTCGTCC
CA-TTAATATGTTAAGGTT--TTTTTAGTCATGAATTGGTAGCATGTGGTGCCTTCATTGGTACTAATATTTTGCTAGAT
ATCCAAGGTAATTGAGGCATTGCGCTAATTGATAGTTGGTTTCATTCTACTTATGGTGGTACTGATACTAA-TTTTCTTA
TTTGCGTGGAATTTGGATGTTAAGAATCTACACTGATCAATTTAATCCTTGTATTGATATTAATTTATGGCATGCTCCTG
CAAGTACCTGTTGTGATAAGTCTGAGGGCCAGAATAGTCTTCTTGAGCATACCAAACAGGCTGTGTAATATTTTGAATAT
GGTCTTGAGTCATTTTGATGAATTAGGAAGTGGTGTGATGTCTGTCTGAATGGAGTCATATAGTCTATGAGTTGGAGTTG
TCAGCATGGCTTCAGGGGCACTGGTTCTTATAAACAGCTGCTTATATTTTGTAAGGTAATATTTAGATTATAGTAATTCT
GCAGTATTTATCTATTGTTACCCATGTCTCTATCCTCTGTTCCAACTCTAGTTATCAGTTATCGCTCT-------AATGC
AATGCAGTAAGCCACTGCTGTCTTATTACTTCTTATTAGACACTTACAAATTCAGTTCA-GAGTCTCTTCTGTCATGCTA
GAGTGATGCATGCGTTGTCTTAAAACTTCACTGACACTGCCCTAGGCTAAAAACAAATACATCCCATGGTGCTGAGGTGG
AGCAGAATGAGAGAAATT-AGCCGCATGAACATTGAGTGACGGACAGTTTATCTAATGCCGCAATGCTCTAAACCTAGCA
AATGGTGATAAGT----------------CTGTACGATATTTTACCTTATGCATTGAAGTTCTAAGAATCCAGTATCACC
TAATTTGTGCTAAGG----------------------G---------------------ATGCTATTTTGTTTAGTCTGT
TATGTTTGTATAATTGACTACACTTTGGTTCCTGAATAGCCCCAAATCATCTTTTTAGGGTTTTACTTGGACAGTC-AGA
TGTATAAATGTGTGTTTACTAGAAGTAGCTGATGTTTTTGGTCACCACTAAACAGGTCAGAAATTGTCTGGCGTTGCTGG
GAGCCCAGCCTATGTGGCGCCTGAGGTGTTGTCAGGAAGCTATTCTGAGAAAGTAGACATATGGGGTGCTGGGGTGCTCC
TCCATGTACTACTGCTTGGTTCACTTCCATTTCAAGGGGGCTCTCTGGAAGCTGTCTTTGAAGCTATAAAGACAGTTGAG
CTTGATTTCAACAGCGGTCCATGGGAATCAATGTCAGTTCTTGGACGGGATCTTATAAGTCGAATGTTGGATCGAGATGT
CTCTTCTAGAATGACTGCTGATCAAGTTCTTTGTAAGTCCAGGCAGTTTCTCATCCAGCATAACTTTATGTATAT-TTT-
ATAAGGTTTTAATTAATTTATTGATGATACTATTTCAGGTCATCCATGGGTGTTGTTTTACACGGAATGTACCCTGAAGG
CTGTAACTCCTAATGTCACTAACCAGATTGTAGCACCCAAAATTCCATGGGACAGAATTAGATCACATTCTGAGTCGTCA
GCTTCAGATTCGTCGAGCCAGAGGTCGGAGGACCAGGATGAATGTGGCATAGTCGACGCACTGACTGCGGCAATAACACA
TGTTAGAATATCGGAGCCGAAAAGAACCCGGCTTTGCAGCCCTGGCATTCCCATACAGCAGGAATGCTCCTCAAACTTAA
AGAGCAACCTGTGCACGGCGTTCTGACATGACCCCAATGTATAGCTCCTTGTGTGTTGGTCTGATGTCAGTGATGGCTCA
GCCTGCTGGTTGTCTC--TGCTGAGGATAATAACTCGGGTTTTCCTGTCAGAGCAAGCAAGCGTTTGACATGGTGATGCT
GTAGATTGCGGTGATGGCTGATGAACCCGACATGGTAGCTGATGCTGTAAATTTTGTAAATAGAATGATCCATGTAGCTA
ATTTATATCTTGACAGAGTTCAGAATAATTTCAGTCTATGATGGTAAACATAGTGTGCGACATCATCCTTGTTCCATTCT
TTGTTTCTTCCGGTTCCTCCTAGT--ATTGAG-ATCAGATTTTTGCATGGATTTCTTGCACTCGGATCAT----TTTTTT
GTTACTAGATCTTTTTCACCCTGAATGTATTTTCCAGAAGCTGTACTCTTAATCTGATTTTGTGACTC--AGATATAACA
CCAGAGAAAAACAA----------------TATGGTGGAGGAAAGAGAAAAAAGAGGCTTATCTTCTTTTA------ATT
ATTTCCTCTGTTTCATAATGTAGTGTGTATACTTCCTTCGTTCCTAAATATTTGCCTTTCTTGAGATTTCAACAACATAT
GAATATATGTAGATATATTTTAAGAGTGTGAATTCACATTTTGCTCAAATCTCCCGAGCGTCCTCTTGTTCCTTTCACGC
ATTTTTCAACCCCGTGAACGTTTTTCAAATTTATGAACTTTTTTGAAAAACCTGAACAATTTTCAAGTCCATGAATTTTT
TGTTCCTTTCACGCATTTTTCAACTCTGTGAACGTTTTTCAAATTTATGAACTTTTTTGAAGAACCTGAACAATTTTTAA
GTCCATGAATTTTTTCTAATAATTCATTTTTTAAATACAACTCTATGATTTTTAAAATTTCATGATTTTTATTAGTAAAG
TCAACTAGTCAACCAAACGAGTGAAGAGAGGACGACCGAGCGAGCCAACAGCTCGCCTTGGTGGGCCGACCATGTGAGCT
CCCTCAATACCTTTTCACG
>chr5D_1
GTATCCTTCCAGAACCCTCCGTCCGTCGTGAGAAAAAAGATCTGGC-------CACAATCGCCATCAGCCGGGGCATCAA
ATCGGGGC-GATAACCGCACCCGCACCGGAACCGGCAAAAGCCCAGGCGACGGAACGTCGCGTGATTTCCCCG-----CA
GACCACCACCGTCGCCCACCCGTCCGGCACCGCTCCATCGCG----TCTGCCCGTACGCGTCCA--------CCCGCCCC
AGCCCGAACCGTGCCCGCCTTTCGCTTCTCTCTCTCCCCCGTG-CTCCCGAGCGGCCGAACCGACACCGAGACGACGCCA
GCCCCCACCCGCGGGAGGGAGGGACACGAGTCCAACAAAGGCGGCCCCTACCCCCACCCCCATCCCCACCACCACCGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------
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----------------------------------------------------------------------------CTGC
CGCGGAAGCGCAAGGGCGCGCGCTCCCTCGCCGGCTCCCTCCACGACGCCTCCGCGGACCGCAAGCGGACCTGCCGGGAG
CGGAAGCCGCGCCCCGACAAGAAGAAAAAGAAGCCCTCCACCGCCGGCGATGACGCCGCCACCGCCTCCGGCCGGGGCGG
CGTGGTCATGACGGCGCCGCCGGCCAGCGGCCGGGCCGCCCCGGACAGCCCCGGAAGGGGGCTCAAGCGCAAGGTCGGCT
GCATCGAGTCCGCCACCCGGATAGGCCGCAAGAAGCGCCTCGAGGCCGAGTACGAGCTCGGCGACGAGATCGGCCAGGGC
AAGTTCGGCTCCGTCCGGATCTGCCGCGCCAAGGCCGGCGGCGAGGAGTTCGCCTGCAAGGCGCTCCCCAAGAACGGCGA
GGAGACGGTCCACCGCGAGGTCGAGAT--------CATGCAGCACCTCTCCGGCCACCCCGGCGTCGTCACGCTCAAGGC
CGTCTTCGAGGACGCCGACAAGTTCTACCTCGTCATGGAGCTCTGCAGCGGCGGCCGCTTGCTCGACGAGATGGCCAGGG
ACGGCACCTTCTCCGAGCAGCGAGCCGCCCTTGTCATCAAGGATCTAATGTCGGTCGTCAAGTACTGCCATGAAATGGGC
GTCATCCACAGGGACATTAAGCCGGAGAATATTTTGCTCACCAAGACTG-GGAAGATGAAACTAGCAGATTTTGGATTGG
CAGCACGAGTTACTAACGGTAAATTCTTGCTAATATTTCACTTTGAAGCTCTGCTAGATGATAAATAA---GTTGGGTTC
CTGGGGGTACTCTATGTTTACACAAGTTGCAATTTTGATTCGCTTTATACGGC-AAAAAGATATGAATTAGAAGTAGTAG
TAGATCGACTGGAAGTCCGACATTGGACCATGCAAGGTTCTATAATCTTTAATG---ATTAGTATGGTGTTACAACATTT
AGAATTGATGGTTGTACATGGTTGATCTGCGATACGAGTAATTTGCCATGTTAACTGGATTATGGCGGGTTT-AGGTTTC
AATCA---CACAGCATTTTTACAGGTTGCTCATCTTTGTGACCATGCATATCATCTAATCTAATGTGT--TAAACTTCTA
AACAAGTCAGTTAAATAGCTCTCGATTTTTGAGTCAGAAAGTTGGTAGGAAATTTATTCATGTGTCTTCTCCTCTTGCCT
GGTATTCTTAGAGAATGGGA-TGATTTGAATGGAGTCTCAAAGTC-GAGCGCCCATGTCTGGAATCTCTTTGTGCATTCA
CATGGAAGTATCTATATGTATAGTCTGAGACCCAATATAGCACTCTTAAAGTACTGAGCATTTCAGACAGTTTCATGTTT
CAAACTTACACAATCGATAGTGATTGTATTCACTGAATTGGGCCACTTGGTTATGATGGTTGTGTAACTAATAAGATAGT
ACCAGTTCTGCATCAAGCGTTAGGCGCTCTCATTTCTTAAGTCCTTGCGGAGTCGGAAGTGGTGAATGTTTCGCTCAGAT
TCTTTTTTAAATGATGATTTCTGCATGCCGTTTCAGTGTTTTGCATGGTATCGCAAATGAAGAAATGTTCTGTGTCGTAC
CAATTAATATGTTAAAGGTTTTTTTTAGTCATGAATTGGTAGCATGTGGTGCCTTCATTGGTAATT---TTTTGCTAGAT
ATCCAAGGTAATTGAGGCATTGCGCTAATTGATAGTTGGTTTCATTCTACTTGTGGTGGTGCTGATACTAATTTTTCTTA
TTTGCGTGGAATTTGGATGTTAAGAATTTACACTGATCAATTTAATCCTTGTATTGATATTAATTTATGGCATGCTCCTG
CAAGTACTTGTTGTGATGAGTCTGAGGGCCAGAATAGTCTTCTTGAGCATACCAAACAGGCTGTGTAATGTTTTGAATAT
GGTCTTGAGTCATTTTGATGAATTAGGAAGTGGTGTGATGTCTGTCTGAATGGAGTCATATAGTCTATGAGTTGGAGTTG
TCAGCATGGCTTCAGGGGCACTGGTTCTTATAAACAGCTGCTTATATTTTGTAAGGTAATATTTAGATTATAGTAATTCT
GCAGTATTTATCTATTGTTACCCATGTCTCTATCCTCTGTTCCAACTCTAGTTATCAGTTATCACTCT-------AATGC
AATGCAGTAAGCCACTGCTGTCTTAGTACTTCTTATTAGACACTTACTGATTCAGTTCAAGAGTCTCTTCTGTCATGCTA
GAGTGATGCATGTGTTGTCTT-AAACTTCACTGACACTGCCCTAGGCTAG-AACACATCCATCCCATGGTGCCGAGGTGG
AGCAGAATGAGAGGAATT-AGCCGCATGAACATTGTGTGACGAACAGTTTATCTAATGCTGCAATGCTCTAAACCTAGCA
AATGATGATAAGTGACAACAATAATGTTACTGTATGATATTTTACTTTATGCATCAAAGTTCTAAGAATCCAGTATCACC
TAATTTGTGCTAAGG----------------------GATGCAGATGTTTAGAGCTCTGATGCTATTTTGTTTAGTCTGT
TATGTTTGTATAATTGACTTCACTTTGGTTCCTGAATAGCCCCAAATCATCTTTCTAGGGTTTTACTTGGACAGTCAAGA
TGTATAAATGTGTGTTTACTAGAAGTAGCTGATGTTTTTGGTCACCACTAAACAGGTCAGAAATTGTCTGGCGTTGCTGG
GAGCCCAGCCTATGTGGCGCCTGAGGTGTTGTCAGGAAGCTATTCTGAGAAAGTAGACATATGGGGTGCTGGGGTGCTCC
TCCATGTACTACTGCTTGGTTCACTTCCATTTCAAGGGGGCTCTCTGGAAGCTGTCTTTGAAGCTATAAAGACAGTTGAG
CTTGATTTCAACAGCGGTCCATGGGAATCAATGTCAGTTCTTGGACGGGATCTTATAAGTCGAATGTTAGATCGAGATGT
CTCTTCTAGAATAACTGCTGATCAAGTTCTTTGTAAGTCCAGGCAATTTCTCATCCAGCATAACTTTATGTTTATATTT-
ACAAGGTTTTAATTAATTTTTTGATGATACTATTTCAGGTCATCCATGGGTGTTGTTCTACACGGAATGTACCCTGAAGG
CTGTAACACCTAATGTCACTAACAAGATTGTAGCACCCAAAATTACATGGGACAGAATTAGATCACATTGTGAGTCGTCA
GCTTCAGATTCGTCTAGCCAGAGGTCGGAGGACCAGGATGAATGTGGCATAGTCGACGCACTGACAGCGGCAATAACACA
TGTTAGAATATCGGAGCCGAAAAGGACCCGGCTTTGCAGCCCCGGCATTCCCATACAGCAGGAGTGCTCCTCAAACATAA
AGAGCAACCTGTGTACGGCGTTCTGACATGACCCCAATGTATAGCCCCTTGTGTGTTGGTCTGATGTCAGTGATGGCTCG
CCCTGCTGGTTGTCTCTGTGCTGAGGATAATAACTCGGGTTTTCCTGTCAGAGCAAGCAAGCGTTCGACATGGTGATGCT
GTAGATTGCGGTGATGGCTGATGAACCCGACATGGTAGCTGATGCTGTAAATTTTGTAAATAGAATGATCCATGTAGCTA
ATTTATATCTTGAGAGAGTTGAGAATAATTTCAGTCTATGATG---AACATAGTGCGCGCCATCATCCTTGTTCCATTTT
TTGTTTCTTCCTGTTCCTCCTAGTCTATTGAG-ATCAGATTTTTGCACGGATTTCCTGCATT-GGATTTT----TTTTTT
GTTACTAGATCTCTTTCGCCCTGAATGTATTTTCCAGAAGCTGTACTCTTAATCTGATACTTGTGATTTAAGATAT----
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr5A_50
-----------------------------------------------------CACAGTCGCCATCAGCCGGGGCATCAA
ATCGGGGCAGATAACCGCGCCCGCACCGGAACCGGCAAAAGCCCAGGCGACGGAACGTCGCGTGATTTCCCCGCAGACCA
GACCACCACCGTCACCCACCCGTCCGGCACCGC--------G----TCGGCCCGTACGCGTCCACCCACCCGCCCGCCCC
AGCCCGAACCGTGCCCCTTGTCTCCTCCCCC----CCCGTGCTCCTCCCGAGCGGCCGAACCGACACCGAGACGACGCCA
GCCCCCACCCGCGGGAGGGAGGGACACGAGTCCAACAAAGGCGGCTCCTACC-----------CCCCACCACCACCGTCC
TCATCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNN---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CCCCCCGATGGAGTCGCTGC
CGCGGAAGCGCAAGGGCGCGCGCTCCCTCGCCGGCTCCCTCCACGACGCCTCCGCGGACCGCAAGCGCACCTGCCGGGAG
CGGAAGCCGCGCCCCGACAAGAAGAAAAAGAAGCCCTCCGAC---------GACGCCGCCACCGCCTCCGGCCGGGGCGG
CGTGGTCATGACGGCGCCGCCGGCCAGCGGCCGGGCCACCCCGGGCAGCCCCGGCCGGGGGCTCAAGCGCAAGGTCGGCT
GCATCGAGTCCGCCACGCGCATAGGCCGCAAGAAGCGCCTCGAGGCCGAGTACGAGCTCGGCGACGAGATCGGCCAGGGC
AAGTTCGGCTCCGTCCGGATCTGCCGCGCCAAGGCCGGCGGCGAGGAGTTCGCCTGCAAGGCGCTCCCCAAGAACGGCGA
GGAGACGGTCCACCGCGAGGTCGAGAT--------CATGCAGCACCTCTCCGGCCACCCCGGCGTCGTCACGCTCAAGGC
CGTCTTCGAGGACGCCGACAAGTTCTACCTCGTCATGGAGCTCTGCAGCGGCGGCCGCTTGCTCGACGAGATGGCCAGGG
ACGGCACCTTCTCCGAGCAGCGGGCCGCCCTTGTCATCAAGGATCTAATGTCGGTCGTCAAGTACTGCCACGAAATGGGC
GTCATCCACAGGGACATTAAGCCGGAGAATATTTTGCTCACCAAGACTG-GCAAGATGAAACTAGCTGATTTTGGATTGG
CAGCACGAGTTACTAACGGTAAATTCTTGCTAATATTTCACGTTGAAGCTCTACTAGATGATAAATAATTTGTTGTGTTC
CTGGGGGTACTCTATGTTTACACAAGTTGCAATTTTGATTCGCTTTATATGGC-AAAAAGATATCAATTACAAGTAGTAG
AAGATCGACTGGAAGTCCGACATTGGACCATACAATGTTCTATAATATTTAATAATTATTAGTATGATGTCATGGCATTT
AGAATTCATGGTTGTACATAGTTGATCTGTGATACGAGTAATTTGCCATGTTAACCGAATTACTGCGGGTTTCAGGTTTC
AATCACTTCACAGCATTTTTGCAGGTTGCTCATATTTGTGACCATGCATATCATCTAATCTAATGTCTTCTAAACTTCTG
TACAAGTCGGTTGGATAGCATCCAATTTGTGAGTCATG-AGTTGGTAGGAAATGTATTCATGTGTATGCTCCTCTTGCCC
GATATGCTTAGAGAATTGGG--GATTTGAATGGAGTGTCAAAGTC-GAGCGCCCAT--CTGGTATCTCTTAGTGCATTCA
TCTGCAAGTATTTATATGTATAGTCTGAGGCCCAATATAGCACTCTTAAAGTACTGAGCATTTCAGACAGTTTCATGTTT
CATACTTACACAATCGGTACTGATTGTATTCATTGAATTGGGCCACTTGGTTATGATGGTTGTGTAACTAATAAGATGGG
ACCAGTTCTGCATCAAGAGTTAGGCGCTCTCATTTCTTAAGTCCTTGCGGAGCTGGAAGTGGTGAATGTTTAGCTCAGAT
TCTTGTTTAAATGATGATTTCTGCATGCCGATTCAGTGTTTTGCATGGTATTGCAAATGAAGAAATGTTCTGTGTCGTAC
CAATTAATATGTTAAAAGGTGTTTTTAGTCATGAATTGGTAGCATGTGGTGCCTTCATTGGTAAGTTC---TTGCTAGAT
ATCCAAGGTAATTGAGGCATTGCGCTAATTGATAGTTGGTTCCATTCTACTTGTGGTGGCGCTGATACTAATTTTTCTTA
TTTGCGTGGAATTTGGATGTTAAGAATCTACACTGATCAATTTAATCCTTGTATTGATATTAATTTATGGCATGCTCCTG
CAAGTACCTGTTGTGATGAGTCTGAGGGCCAGAATAGTCTTCTTGAGCATACCAAACTGGCTGTGTAATGTTTTGAATAT
GGTCTTGAGTCATTTTGATGAATTAGGAAGTGGTGTGATTTCTGTCTGAATGGAGTCATATAGTCTATGAGTTGGAGTTG
TCAGCATGGCTTCAGGGGCACTGGTTCTTATAAACAGCTGCTTATATTTTGTAAGGTAATATTTAGATTATAGTAATTCT
GCAGTATTTATCTATTGTTACCCATG--TCTATCCTCTGTTCCAACTCTAGTTATCAGTTATCACTCTAATGTCTAATGC
AATGCAGTAAGCCAGC-----CTTGGTACTTCTTATTAGACACTTACCGATTAAGTTCAAGAG--TCTTCTGTCATGCTA
GAGTGATGCATGTGTTGTCTT-AAACTTCACTGACACTGCCCTAGGCTAA-AACACATACATCCCATGGTGCTGAGGTGG
AGCAGAATGAGAGGAATTTAGCCGCATGAACATTGAGTGACGAACAGATTATCTAATGCTGCACTGCTCTAAACATAGCA
AATGATGATAAGTGACAACAATAATGTTACTGTATGATATTTTACCTTATGCATCGAAGTTCTAAGAATCCAGTATCACC
TAATTTTGTGCTAAGGGATGCAGATGTTTAGAGCTCTG---------------------ATGCTATTTTGTTTAGTCTGT
TATGTTTGTACGATTGACTTTACTT-GGTTCCTGAATAGCCCCAAATCATCTTTCTAGGGTTTTACTTGGACAATC-AGA
TGTATAAATGTGTGTTTACTAGAAGTAGCTGATGTTTTTGGTCACCACTAAACAGGTCAGAAATTGTCTGGCGTTGCTGG
GAGCCCAGCCTATGTGGCGCCTGAGGTGTTGTCAGGAAGCTATTCTGAGAAAGTAGACATATGGGGTGCTGGGGTGCTCC
TCCATGTACTACTGCTTGGTTCACTTCCATTTCAAGGAGGCTCTCTGGAAGCTGTCTTTGAAGCTATAAAGACAGTTGAG
CTTGATTTCAACAGCGGTCCATGGGAATCAATGTCAGTTATTGGACGGGATCTTATAAGTCGAATGTTGGATCGAGATGT
CTCTTCTAGAATAACTGCTGATCAAGTTCTTTGTAAGTCCAGGCAATTTCTCATCCAGCATAACTTTATGTTTATATTTT
ATAAGGTTTTAATTAATTTTGTGATGATACTGTTTCAGGTCATCCATGGGTGTTGTTCTACACGGAATGTACCCTGAAGG
CTGTAACTCCTGATGTCACTAACAAGATTGTAGCACCCAAAATTCCATGGGACAGAATTAGATCACATTGTGAGTCGTCA
GCTTCAGATTCGTCGAGCCAGAGGTCGGAGGACCAGGATGAATGTGGCATAGTCGACGCACTGACAGCGGCAATAACACA
TGTTAGAATATCGGAGCCGAAAAGGACCCGGCTTTGCAGCCCCGGCATTCCCATACAGCAGGAGTGCTCCTCAAACTTGA
AGAGCAACCTGTGCACGGCGTTCTGACATGACCCCAATGTATAGCTCCTTGTGTGTTGGTCTGATGTCAGTGATGGCTCG
GCCTGCTGGTTGTCTCTGTGCTGAGGATAATAACTCGGGTTTTCCTGTCAGAGCAAGCAAGCATTTGACATGGTGATGCT
GTAGATTGCGGTGATGGCTGATGAACCCGACATGGTAGCTGATGCTGTAAATTTTGTAAATAGAATGATCCATGTAGCTA
ATTTATATCTT--GAGAGTTGAGAATAATTTCAGTCTATGCTGGTAAACGTAGTGTGCACCATCATCCTTGTTCCATTCT
TTGTTTCTTCCTGTTCCTCCTAGACTATTGAGGATTAGATTTTTGCATCGATTTCCTGCATT-TGATATTATTATTTTTT
GTTAATAGATCTTTTTCGCTGTGAATGTATTTTCCAGAAGCTGTACTCTTAATCTGATATAC-TGACTTAAGATATTACA
CCAGAGAAAAAAAAACAATATGGTAAATGCTAAGGTGGTGGAAAGAGAAAAAAGAGGCTTATCTTCTTTTCTTAATTATT
ACTACCTTAGTTTCATAATATAGTGTGTAGATTTC---------------------------------------------
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>chr2D_1261
GTCG----------------------------------------------------------------------------
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-----------GCCACGCGGATAGGCCGCTAGAAGCGCCTCGATGCCGAGTACTAGCTCGACGGCGAGATCGAACGGGAA
AAGTTCGGCTCCATTCGGATCTGCCGTGCCAACGCCGGCGGCGAGGAGTTCACAA--------CTCCCCAACAATGGCAA
GGATACGGTAGACTGCGTGGCCGACATCGTGCAGGCATGTAGCACCTCCCGGGCCACCCTGGTGACATCACGCTCAAGGC
CGTCTGCGAGGACATCGGCAAGTTCTACCTCATCATGGAGCTCTGCAACGGCGACCGCTTGCTGGACGAGATGGCCAGGT
ATGTTACCTTCTTTGAGTTGCAAGCCACATTTGTGATCAAGGATCTCATGTTAGTGGTGAAGTACTGCCACGAAATGGGC
GTCATCCACAGGGACATTAAGCCGGGATATATTTTGCTCAGCGGAAACATGGAAGATGAAACTAGCAGATTTTGGATAGG
CAGCATGAGTCACTAACGGAAATTTTTTGCTAATAT--------------------------------------------
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-------------------
>SNPs
--------------------------------------SS-SSSSSSSSSSSS------------------S--------
--------------------------------------------------------------------------------
------------------------------------------SSSS----------------------------------
-------------------------------SS-----------------------------------------------
--------------------------------------------------------------------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
----------------------------------------S----------S-S-------S------------------
---------------------------------------S----------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------S------------------------S-------S---S------S---------------
------------------------S-------------------------------------------SS----------
------------S-------------------------------------------------------------------
-------------------------------------------S------------------------------------
----------------------S-------------------------------S-----------------------S-
---------------S-S---------------------------------------------S-SSSS-----------
----------------------------------------------------S-------S-------------------
--------------------------------------------------------------------------------
-----------------S---------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-------------------------S---------------------SS-------------------------------
------------S--------S----------------------------S----S------------------------
-------------S----------------------------S----------------S--------------------
----S-----------------------------S-------------------S-------------------------
--------------------------------------------------------------------------------
-------------------S----------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S--------------------------------S-------------------------S--------
-------------------S-------------------------------------S----------------------
-----------------------S---------------------------------------------S----------
-----------------------------------------------------------------S--------------
------------------------S-----------------S--------------------S----------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------S--------------------------------------S--------------------
-----------S-------------------------------------------S----S-S----SS-----------
-----------------S----------------------------------------S--SSSSS-S--------S---
-----------S--------------------S-----S-------------------------------S---------
-S-S---SS----------S---------S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_413
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ACCGTCC
TCATCTCCTCCTC-------------------------------------------------------------------
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-------------------
>reverse_2305
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------ACTCTTTGTGCATTCA
CCTGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>forward_2294
--------------------------------------------------------------------------------
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----------------------------------GTCTCAAAGTCAGAGCGCCT--------------------------
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-------------------
>reverse_4363
--------------------------------------------------------------------------------
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------------------------------------------TGGCATTCCCATACAGCAGG------------------
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-------------------
>forward_4306
--------------------------------------------------------------------------------
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----------------------------------------------GCATAGTCGACGCACTGACT--------------
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-------------------
>reverse_5380
--------------------------------------------------------------------------------
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-------------------AGTGAAGAGAGGACGACCGA-----------------------------------------
-------------------
