>input_sequence_21859
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-----------------------ATGGCGGCGGCAGC---GTGGAGGAGGCTGCTGCTGCAGTCGGAGACGCCGCGGCGC
CAGCAGCAGCAGGCGGCGGCGGCGTCGCCGTCGCCGTGGAGCGCGGGCTACCTCAACACGTGGCTGTCGCAGCGCACGCC
CGTCTTCGGCCTCCGCCTCTGGGTGCTCATGGGCATCGCCGTCGGCGCCGCCATCGTGCTCGTGCTGCTGCTGCTCTTCC
TCTGCCTCTCGCGCCGCCGCCGCGGCCGCCGCGCGGCCAATCTCTACCACCCCGCCGACGCCAAGCCCCTCA---AGCAG
CAGCAGCACTTGCAGCACCACCACGCGCCCACGCCGGCCAAGGACATCCAGGAGATCGTGCGCCGGCAGCAG---CAGCA
GCCGGCGCCGACCCCGCTGCCGCAGCCCGCCGCGGTGCAGATGGCCAAGGCGGAGCCGCCGCCGCCGCAGA---------
CGCAGGCGCAGACGCTGCAGCAGCAGAGGGCGCAGCTGCCGGCGATGCCCTCGGGGTCCAAGCGCTCGACGGCGGCCAGC
GGCCTGTCGGCCACCACGAGCGGCGGGAGCGAGCGGGACCTGGCCACGCCGAGGAGCGCCGGCAGCGGCGCGGCCGGGCC
GGAGGTGTCGCACCTCGGCTGGGGCCACTGGTTCACCCTCCGGGAGCTGGAGAAGGCCACCGACGGGCTCGCCGAGGAGA
ATGTGATCGGCGAGGGAGGCTACGGGATTGTTTACAGAGGCACGCTGCAAGATTCCACCATCATTGCCGTCAAGAATCTG
CTCAATAATAGGTAACCTCGTGACCTCACATCTCGAAAGCTTCCGCCTCTTCTTTCTCCTTTCAGCTGTTCGATTTGAAT
CG-AACAGAAATCTCCTACGTTTCGATGCTCCGGTGAGCGCTCGAGGGTCAAATTTCTGTGTTTTGGTCCGT--TCATCA
AAGCAAATCCATCGGCCAGAGTT------------------ATTTGATTTGGGGGAAAA--AATCTTGCAAGCAA-----
-----------------------ATCCATCCTTTGCTGA--------TGAACTTGTTCCAG-------------------
------TTTTTTCATGAAATTGTTGTGCTTTGCTGATGAACTGTTGGATTGTGGGGCTCAATAAAATTTTCAAATTACTT
T------CTTCATTCACCCTCTTTCTGTGTGCCCATCTGCATTCGATTCTTCTCGTTTCCCGTGGCTCATTTTAAACACT
GCACACATTTCGATGGCTCGATTCGCCGTTCCATTTCTCAACCCATAC---TACTCTGATATCCATGTCTCTGATAAAAA
TATCCATTTCTCTC--------------------TCCCTGCTTTTGCATCAGGGGCCAGGCCGAGAAGGAGTTCAAGGTG
GAGGTCGAAACCATCGGCCGTGTCCGGCACAAGAACCTCGTCAGGCTGCTCGGCTACTGCGTAGAGGGTGCCTACAGGTA
GAATGCATT-GCAATCTCTTCCTCAATTTCTGAATCAGTTTCCGAATTTCTCTTCTAATGTGGTTGAACTTA-ACAGGAT
GCTTGTCTACGAGTATGTCGACAACGGCAACCTTGATCAGTGGCTTCATGGAGAGATTGGGGAGGAGAGCCCATTGACCT
GGGATATGAGGATGAACATAATTATCGGAACTGCTAAAGGGTAATGCTTCTTCACTCAG---------------------
------AGTGCTGTTTCTTGGACTATAATCTTCCTCATTT---TACAGTTTAGCACCAATCTGTATATACAGTGGTTACT
GTGTGTGGCTAGGCTGTGACTGAAGAAACAAACCAAATATAGCTCATTAGCATTTTAGTTTCTTGGAAGACATAGGTGCT
AGCTGGCATGTTTAGGCCTGTTCTGTTACGAGACATGCGTCTCGGTTAGGATGATGGAGCCGAGTTCTGGTGAGATTCGC
TGTCCCAAGGAATTCAGATGCTTCACTCAGAAG--TTGTTAGGACC----------------------------------
-------------------------------------------------------------------------------T
ATTTCTTGACATGCACATATTCCTTTGTAAGAGGTTAGAGAAAGAGACAACTGATTGCAACCTATGTTTCGCAGATATGT
AAATATTATGGTACTGGCGTTTCATTCTG---------------------------------------------------
-------------------------------------------------------------------CTTCTGAAAACAA
TTTGAATTTCATACCCATATTTAAATAGGAGAAAAAGGTCTTTAGTTTCTGAGACATGGCATGTGCTTATCTTGCATGCC
TCCTTCCCTTTGCTTTCCTGCTGCCAGCTTTATTTCAAACAGAGCACCCGGTTTGAGATAGTTTGACGTTCTCCCTCTAG
CACTCTAATGT---------------------------------------------------------------------
-------------------------------------------------------AGTACTAGTATTTGTTAATATTTTG
TTTAGCTTGCGTGTGTTTTTAGAATAGAACATTGTGATTCTGTTTAGCGGTCAAAGCCTGAACTGAAGCATCATGTGCAC
TGGCAAGCACTCTAGCTGTTATATTCTTTGCCTGGAAGTAATATTATTGCCAGTGGTTTGCTTAAACAACCTCAACAGCT
CTCTTCAATGCTGGATGTGATAGTAAAAATTCGTCACCTCTGACACCCGATTTTTCTTGCACAGGCTGGCCTATCTTCAC
GAAGGGCTGGAGCCGAAGGTTGTTCACCGCGACGTCAAATCTAGCAATATTCTCATCGACAAGCAGTGGAATGCTAAAGT
ATCGGATTTTGGGCTTGCGAAACTGCTGTGCTCGGAGGAAAGCTATGTTACTACCCGTGTTATGGGAACTTTCGGGTTAG
TGTTGATAGTCTTTTAGTGCTCAGTGATGCAGCAAAGGTTGTTTGTATCTTGTCATGACTGAGCCTTTTTTCTTAATGTT
GCAGCTATGTGGCGCCTGAGTACGCCAGCACCGGAATGTTAACTGAGAGGAGCGATGTGTATAGCTTTGGCGTTCTTTTG
ATGGAGATTATAACTGGTAGATCTCCTGTAGATTATACCAGGTCAGCTGGAGAGGTAAGCTTTTTTTGTG--TGCCCATT
TTTAGTAGTTTCTTTTCAGAAATGTGGAGGCGGCCCCGATGAAGCTAAATTCTTGTATTTTTCAGGTGAACTTGATTGAG
TGGCTGAAGAACATGGTGGCTGAGAGGAAAGCAGAGGACGTAGTCGACCCCAAGCTTCCCGAGAGGCCTTCCCCGAAAGC
ACTGAAGCGGGCACTTCTAGTCGCCCTCCGCTGTGTCGACCCCGATGGCCATAAGCGGCCTAAAATGGGGCATGTGATCC
ACATGCTGGAGATGGAGGACCTAAACCCCCGCGGCGACGTATGTTC----CTTCCTACTATCTCAGCAACCTTGCTATAA
TCTCTCATTCGCTCAGCATCAGTGCTCAGTTACTCACATTGTCAACTGCAACGAATGAAATGTGCAGGACAGGAAGCCCC
GAAGGGATGCGGCAACGGACAGATCCAGCTCGATGGAGGACGGGAGCGTGAGCAAGCGCGAGAACCAACGGTACAGATGA
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-------------------------------------------------------------------------
>chr4D_1_TraesCS4D01G314800
ATATCTATATCTATACCAATATAAAAA-AAC---CAAAGAGGCAGATCCAACTAATCTCGACCGTCAAATGAGGTCAATC
TAATGACCTAGACTGCTCTAATGGTGAGCGCTAAACA----------TGTAATTGATATTTTGCCAAATATAAA-CGTCA
GAATTAATGACATAATTAACAAGCAGATG---ATACCCTACCTAATATCCACGTGCAATTAATATACTGCATACTAATAT
CAATGTGCATTCCACTCGTACACATTTACTAGTATCTATAAATCACACAGTCCCATTAATTAACACGCCTAGCAATATTC
CTAGTGCCAAATTTAACATTTCATTACCAGTAAAAAAATCAACGATGGGAACGATTTTGGAACATATGGCACCCAACCAC
CAACGAACACAAATCCTATTTTCAACAAAAGATCCCTCCAGCATATC-A-TCCAAGTGGTGATAAAGCACACTCTTTGAT
C-CACAAAGCAAAAGACACAGACAACGAGGCAAAAATGAAATGTTGCAAAAGGTGATTACATGCATGATAACC----CTA
GCACTAATGCAACT---ATCATTGACAAAAGTTGAACTAGTAGTAGGAGTACATAATAAAAGCAGTAAATAATAAATCCA
TAAAAAATGGCACCATGCA-TGGCTTGGCTTTCACACATTCTTTTCC-AAAAGAAAGATGATATAAAGACT---------
--------------------GATCCCAAAACCATATCCGGCTTGCCTCTGGCCCCACCGCAATGTGTCAGTGACCTCACT
GCCCCTGGGTCCACTGTCATCCGGGCCCACGTGTCATGGAACGATGGCAACGGGCTGACAAGTAACGGCAGAACCCTGCG
T---CTCTACAAAATGCTAACCCCACACGGCAAAGCGTACCCACGCCGGACGCTCCCCTGCCTCC-GAACCAATCTCCCG
TCGAGTCAGACGCGCATGTAAGCGGCCGGAGAAGAATCCCAACCTCCCAAGCGACTCTGTCCCATCATCACCGTCGCCGC
CGTCAGCAGCTAGAGCCGTGGCGATGGCGGCGGCAGC---GTGGAGGAGGCTGCTGCTGCAGTCGGAGACGCCGCGGCGC
CAGCAGCAGCAGGCGGCGGCGGCGTCGCCGTCGCCGTGGAGCGCGGGCTACCTCAACACGTGGCTGTCGCAGCGCACGCC
CGTCTTCGGCCTCCGCCTCTGGGTGCTCATGGGCATCGCCGTCGGCGCCGCCATCGTGCTCGTGCTGCTGCTGCTCTTCC
TCTGCCTCTCGCGCCGCCGCCGCGGCCGCCGCGCGGCCAATCTCTACCACCCCGCCGACGCCAAGCCCCTCA---AGCAG
CAGCAGCACTTGCAGCACCACCACGCGCCCACGCCGGCCAAGGACATCCAGGAGATCGTGCGCCGGCAGCAG---CAGCA
GCCGGCGCCGACCCCGCTGCCGCAGCCCGCCGCGGTGCAGATGGCCAAGGCGGAGCCGCCGCCGCCGCAGA---------
CGCAGGCGCAGACGCTGCAGCAGCAGAGGGCGCAGCTGCCGGCGATGCCCTCGGGGTCCAAGCGCTCGACGGCGGCCAGC
GGCCTGTCGGCCACCACGAGCGGCGGGAGCGAGCGGGACCTGGCCACGCCGAGGAGCGCCGGCAGCGGCGCGGCCGGGCC
GGAGGTGTCGCACCTCGGCTGGGGCCACTGGTTCACCCTCCGGGAGCTGGAGAAGGCCACCGACGGGCTCGCCGAGGAGA
ATGTGATCGGCGAGGGAGGCTACGGGATTGTTTACAGAGGCACGCTGCAAGATTCCACCATCATTGCCGTCAAGAATCTG
CTCAATAATAGGTAACCTCGTGACCTCACATCTCGAAAGCTTCCGCCTCTTCTTTCTCCTTTCAGCTGTTCGATTTGAAT
CG-AACAGAAATCTCCTACGTTTCGATGCTCCGGTGAGCGCTCGAGGGTCAAATTTCTGTGTTTTGGTCCGT--TCATCA
AAGCAAATCCATCGGCCAGAGTT------------------ATTTGATTTGGGGGAAAA--AATCTTGCAAGCAA-----
-----------------------ATCCATCCTTTGCTGA--------TGAACTTGTTCCAG-------------------
------TTTTTTCATGAAATTGTTGTGCTTTGCTGATGAACTGTTGGATTGTGGGGCTCAATAAAATTTTCAAATTACTT
T------CTTCATTCACCCTCTTTCTGTGTGCCCATCTGCATTCGATTCTTCTCGTTTCCCGTGGCTCATTTTAAACACT
GCACACATTTCGATGGCTCGATTCGCCGTTCCATTTCTCAACCCATAC---TACTCTGATATCCATGTCTCTGATAAAAA
TATCCATTTCTCTC--------------------TCCCTGCTTTTGCATCAGGGGCCAGGCCGAGAAGGAGTTCAAGGTG
GAGGTCGAAACCATCGGCCGTGTCCGGCACAAGAACCTCGTCAGGCTGCTCGGCTACTGCGTAGAGGGTGCCTACAGGTA
GAATGCATT-GCAATCTCTTCCTCAATTTCTGAATCAGTTTCCGAATTTCTCTTCTAATGTGGTTGAACTTA-ACAGGAT
GCTTGTCTACGAGTATGTCGACAACGGCAACCTTGATCAGTGGCTTCATGGAGAGATTGGGGAGGAGAGCCCATTGACCT
GGGATATGAGGATGAACATAATTATCGGAACTGCTAAAGGGTAATGCTTCTTCACTCAG---------------------
------AGTGCTGTTTCTTGGACTATAATCTTCCTCATTT---TACAGTTTAGCACCAATCTGTATATACAGTGGTTACT
GTGTGTGGCTAGGCTGTGACTGAAGAAACAAACCAAATATAGCTCATTAGCATTTTAGTTTCTTGGAAGACATAGGTGCT
AGCTGGCATGTTTAGGCCTGTTCTGTTACGAGACATGCGTCTCGGTTAGGATGATGGAGCCGAGTTCTGGTGAGATTCGC
TGTCCCAAGGAATTCAGATGCTTCACTCAGAAG--TTGTTAGGACC----------------------------------
-------------------------------------------------------------------------------T
ATTTCTTGACATGCACATATTCCTTTGTAAGAGGTTAGAGAAAGAGACAACTGATTGCAACCTATGTTTCGCAGATATGT
AAATATTATGGTACTGGCGTTTCATTCTG---------------------------------------------------
-------------------------------------------------------------------CTTCTGAAAACAA
TTTGAATTTCATACCCATATTTAAATAGGAGAAAAAGGTCTTTAGTTTCTGAGACATGGCATGTGCTTATCTTGCATGCC
TCCTTCCCTTTGCTTTCCTGCTGCCAGCTTTATTTCAAACAGAGCACCCGGTTTGAGATAGTTTGACGTTCTCCCTCTAG
CACTCTAATGT---------------------------------------------------------------------
-------------------------------------------------------AGTACTAGTATTTGTTAATATTTTG
TTTAGCTTGCGTGTGTTTTTAGAATAGAACATTGTGATTCTGTTTAGCGGTCAAAGCCTGAACTGAAGCATCATGTGCAC
TGGCAAGCACTCTAGCTGTTATATTCTTTGCCTGGAAGTAATATTATTGCCAGTGGTTTGCTTAAACAACCTCAACAGCT
CTCTTCAATGCTGGATGTGATAGTAAAAATTCGTCACCTCTGACACCCGATTTTTCTTGCACAGGCTGGCCTATCTTCAC
GAAGGGCTGGAGCCGAAGGTTGTTCACCGCGACGTCAAATCTAGCAATATTCTCATCGACAAGCAGTGGAATGCTAAAGT
ATCGGATTTTGGGCTTGCGAAACTGCTGTGCTCGGAGGAAAGCTATGTTACTACCCGTGTTATGGGAACTTTCGGGTTAG
TGTTGATAGTCTTTTAGTGCTCAGTGATGCAGCAAAGGTTGTTTGTATCTTGTCATGACTGAGCCTTTTTTCTTAATGTT
GCAGCTATGTGGCGCCTGAGTACGCCAGCACCGGAATGTTAACTGAGAGGAGCGATGTGTATAGCTTTGGCGTTCTTTTG
ATGGAGATTATAACTGGTAGATCTCCTGTAGATTATACCAGGTCAGCTGGAGAGGTAAGCTTTTTTTGTG--TGCCCATT
TTTAGTAGTTTCTTTTCAGAAATGTGGAGGCGGCCCCGATGAAGCTAAATTCTTGTATTTTTCAGGTGAACTTGATTGAG
TGGCTGAAGAACATGGTGGCTGAGAGGAAAGCAGAGGACGTAGTCGACCCCAAGCTTCCCGAGAGGCCTTCCCCGAAAGC
ACTGAAGCGGGCACTTCTAGTCGCCCTCCGCTGTGTCGACCCCGATGGCCATAAGCGGCCTAAAATGGGGCATGTGATCC
ACATGCTGGAGATGGAGGACCTAAACCCCCGCGGCGACGTATGTTC----CTTCCTACTATCTCAGCAACCTTGCTATAA
TCTCTCATTCGCTCAGCATCAGTGCTCAGTTACTCACATTGTCAACTGCAACGAATGAAATGTGCAGGACAGGAAGCCCC
GAAGGGATGCGGCAACGGACAGATCCAGCTCGATGGAGGACGGGAGCGTGAGCAAGCGCGAGAACCAACGGTACAGATGA
TGATGGGAACGGCACAAGAACGACGA---CGCCGAA---CCGGGACATGATCTGGG--TGTGCGGATCGGATTGCCGCTT
GCTAGATA-TGTACGTACTTACGGTACCATTAA----CCAAGCATGTCATGATTGCATTATTTTTTGGCCCCTGATTGGA
TCTCATAGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTGATTGTATTATATGTGAGAGCATCGTTCTATGACAGTTC-TTGATATAC
TCACTTGTTGAGCCGCGCAAGTGTGGGGGCCTGCTGGTGTGGTGTT-CTTCTGACTTGTGACTAACATGCC-TTTCCTTG
GCCATAGCTGACACTCATCAGAGTCTTAATGATAACCCACTGGCTAAATGCAAGTGCTGGAGTAGTTAATCCTC------
-----------------------------ATGATTCCTGGCACTGGAAGATGAGGCACTGATCATGCATATGCATATGCA
TGCCTTGTTGCTGGCTGCA-------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CTGCACGCACGTGAGGTCACATGCCATTTGCG---------
-------------TTCTTTTTTCTCT----GATGAAGATGCTGGCAAAGCCATTGCTGTTTATCATCGTCGCCAT-----
------TGGTTTGGTTTGGCCGAATGCTCTTTTTGGCCGTCCACTATACCGCATCTGGCTGCTCGGTG-AAACAGCATTT
----GGGCCGGCCCTTGTCGGCTTCGCCTTGTCCTGTCCTGGTCTTAACCATGCCCGTCGTCTTTACCTTTGC
>chr5A_1
ATATTTATATCTATACCAATATATAAA-AAGACACAAAGAGGCATGTCCGAATAATCTTGACCGTCAAACAAGGTCAATC
CAACAACCTAGACTGCTCCAATGACGAGCACTCAACATGTTTAGCG-TGCCATTAATATCATACCAAATAAAAA-TGTTA
GAATTAATCACATAATTAACATGCAAGACGATATCCACTACCTGATATCCACACGCAGTTAATATACTGT---CTAATAT
CAATATGCATTGCAC--GTACACATTTATTGATATGTATAGATCACACAGTCCCATTAATTGACACCCCTAGCAATATTC
CTAGTGCCAAATTTAACATTTCATTACCAGTAAAAA-ATCAACGATGGCAACAATTTTGGAACGTATGGCATCCAACCAC
CAACCAACACAAATCTTATTTAGAACAAAAGATCCCACCACCATATTGATTCCAAGTGGTGATAAAGCACACTCTTTGAT
CTCACAAAGCAGAAGACACAGACAACTAGGCAAAAATGAAATGTTGCAAAAGGTGATTACATGCACGCATAACATAC---
-CACTAATGCAACT---ATCATTGACAAAAGTTGAACTAGGAGT---AGCACATAATAGAAGCAGTAAATAAATCCAGC-
--AAAAATGGCACCATGCA-TGGCTTGGCTTTCACACATTCTTTTCCCAAAAGAAAGATGAAATAAATCTCATTCTCATG
GCTCCCACATTTTAAAGGCCGATCCCAAAACCATATCCGGCTTGCCTCTGGCCCCACCGCAGCGCCACAGTGACCTCACT
GCCCCTGGGTCCACAGCCACCCGGGCCCACGTGTCATTGGGCGAAGGCAACGGGCTGACCAGTAACGGCAGAACCCTGCT
GCGCCTCTACAAAATGCTAACCCCACACGGCAAAGCGTACCCACGCCGGACGCTCCCCTGCCCCCCAAACCAATCTCCCG
TGGAGTCAGCCGCGCATGTAAGCGGCCGGAGAAGAATCCCAACCTCCCAAGCGACTCTGCCCCATCGTGGTCGTCAGCAG
CAGCAGCAGCTAGAGCCGTGGCGATGGCGGCGGCGGCGGTGGGGAGGAGGCTGCTGCTGCAGTCGGAGACGCCGCGGCGC
CAGCAGCAGCAGGCGGC---------GCCGTCGCCGTGGAGCGCGGGGTACCTCAACACGTGGCTGTCGCAGCGCACGCC
CGTCTTCGGCCTCCGCCTCTGGGTGCTCATGGGCATCGCCGTCGGCGCCGCCATCGTGCTCGTGCTCCTGCTGCTCTTCC
TCTGCCTCTCGCGCCGCCGCCGGGGCCGCCGCGCGGCCAATCTCTACCACCCCGCCGACGCCAAGCCCCTCA---AGCAG
CAGCAGCACCTGCAGCACCAGCACGCGCCCACGCCGGCCAAGGACATCCAGGAGATCGTGCGCCGGCAGCAGCACCAGCA
GCCGGCGCCGACCCCGCTGCCGCAGCCCGCCGCGGCGCAGATGGCCAAGGCGGAGCCGCCGCCGCCGCAGA---------
CGCAG------ACGCTGCAGCAGCAGAGGGCGCAGCTCCCGGCGATGCCCGCGGGGTCCAAGCGCTCCACGGCGGCCAGC
GGCCTGTCGGCCACCACGAGCGGCGGGAGCGAGCGGGACCTGGCCACGCCGAGGAGCGCCGGGAGCGGCGCGATGGGGCC
GGAGGTGTCGCACCTCGGGTGGGGCCACTGGTTCACGCTCCGGGAGCTGGAGGAAGCCACCGACGGGCTCGCCGAGGAGA
ATGTGATCGGCGAGGGGGGCTACGGGATTGTCTACAGAGGCACGCTGCAAGATTCCACCATCATTGCCGTCAAGAATCTG
CTCAATAATAGGTAACCTCGTGACCTCATATCCCGAAAGTTTCTGCGTGTTTA-TCTCCTTTGAGCTGTTCGATTTGAAT
TGAAACATAAATCCCCTACGCTTTGATGCTCGAATGAATCCCCTAC-----AATTTCTGTGTTTTGGTCTCCCCTCATAA
AAATGAATCCATCGGCCAGAGTGAATTCCTCTTGCTGCGTGATTTGATTTGGGGGAAAACAAATCTTTCAAGCAA-----
-----------------------ATACCCATCCACTGTCTTTTGCCTTGATCTTGTTCCTG-------------------
------TTTTTTCATGAAATTGTTGTGCTTTACCGATGAGCTGTTGGATTGTGGGGCTCAATAAAAATTTTCAAATCACC
TGTCCGGCATCATTCACTCTCTTTCCGAGTGCCCATCCGCATTCGATTCTCCGCGGTTTCCGTGACGCATTTTAAACACT
GCACACATTTCTAGGATTCGAAG-GCTGTTCCATTTCTCACCCCGTCCCATA----------------CTCTGATAAAAA
TATCCGTTTCTCCCCCCATACTCTGATGTCCACATCCCTGCTTTTGCATCAGGGGCCAGGCTGAAAAGGAGTTCAAGGTG
GAGGTCGAAACGATCGGCCGTGTCCGGCACAAGAACCTCGTCAGGCTGCTCGGCTACTGCGTGGAGGGTGCCTACAGGTA
AAATGCATTTGCAATCTCTTCCTCAATTTGTGAACCAGTTTCCGAATTTCTCTTCTAATGTGGTTGAACTTA-ACAGGAT
GCTTGTCTACGAGTATGTCGACAACGGCAATCTCGATCAGTGGCTTCATGGCGAGATTGGGGAAGAGAGCCCATTGACCT
GGGATATGAGGATGAACATAATTATCGGAACCGCTAAAGGGTCATGCTTCTTCACTGTTATTTCACCTTACTAAATGGGT
TTGCCAAGTGCTATTTCTTGGACTATAATCTTCCTCATCATTCTATAGTTTAGCTCC-ATCTGTATATACGGTGGTTACT
GTGTGTTGCTAGGCTGTGACTGAAGAAATAAACCAAATATAGGTCATTAGCATTTTAGTTTCTTGGAAGACAAAGGTGCT
AGCTGGCATGTTTAGGTCTGTTCTGTTACGAGACATGCGTCTCGGTTAGGATGATGGAGCCGAGTTCTGGTGAGATTCGC
TGTCCCAAGGAATTCAGATGCTTCACTCACAAGTTTTGTTAGGACC----------------------------------
-------------------------------------------------------------------------------T
ATTTCTTGACATGCACATATTCCCTTTTAAGAGTTTAGAGAAAGAGACAACTGATTGCAACCTATGTTTCACAGATATGT
AAAAATTATGGTACTAGCGTTTCATTT-----------------------------------------------------
-----------------------------------------------------------------TACTTCTGAAAACAA
TTTGAATTTCATACCCAT--TTAAATAGGAGAAAAAGGTCTTTAGCTTCTGAGACATGGCATGTGCTTATCTTGCATGCC
TCCTTCCCTTTGCTTTCCCGCTGCCAGCTTTATTTTAGACAGGGCACCCGGTTTGAGATAGTTTGAGGTTCTCCCTCTAG
CACTCTAATGT---------------------------------------------------------------------
-------------------------------------------------------AG---TAGTATTTGTTAATATTTTG
TTTAGCTTGCGTATGTTTGTAGAATAGAACATTGTGATTCTGTTTAGCGGTCAAAGCCTGAACTGAAGCATCATGTGCAC
TCGCAAGCACTCTAGCTGTTATATTCTTTGCCTGGAAGTAAT---ATTGCCGGTGGTTTGCTTAAACAACCTCAACAGCT
CTCTTCAATGCTGGATGTGATAGTT-AAATTCGTTACCTCTGACACCCGATTTTGCTTGCCCAGGCTGGCCTATCTTCAC
GAAGGGCTGGAACCGAAGGTTGTCCACCGCGACGTCAAATCTAGCAATATTCTCATCGACAAGCAGTGGAATGCTAAAGT
ATCGGATTTTGGGCTTGCAAAATTGCTGTGCTCGGAGGAAAGCTATGTTACCACCCGTGTTATGGGAACCTTTGGGTTAG
TGTCGATAGTCTTTTAGTGCTCGGTGATGCAGAAAAGGTTGTA--TATCTTGTTATGACTGAACCTTTTG-CTTTATGTT
GCAGCTATGTGGCGCCTGAATACGCCAGCACCGGAATGTTAACTGAGAGGAGCGATGTGTATAGCTTTGGCGTTCTTTTG
ATGGAGATCATAACTGGTAGATCTCCTGTAGATTATACTAGGTCAGCTGGAGAGGTAAGTTTTTTTTTTTTA-GCCCATT
TCTATTAGTTTCTTTTCAGAACTGTGGAGGCGG-CCCGATGAAGCCAAATTCTTGTATTTTCCAGGTGAACTTGATCGAG
TGGCTGAAGAACATGGTGGCTGAGAGGAAAGCAGAGGAAGTGGTCGACCCCAAGCTCCCCGAGAGGCCTTCCCCGAAAGC
CCTGAAGCGGGCTCTTCTGGTCGCCCTTCGCTGCGTCGACCCCGATGGCCATAAGCGGCCTAAAATGGGGCATGTGATCC
ACATGCTGGAGATGGAGGACCTAAACCCCCGCG---ACGTATGTTT----CTTCCTACTATCTCGGCAACCTTGCTATAA
TCTTTCATTCGCTCAACATCAGTGATCAGTTACTCACATTGTCAACTGCAACGAATGAAATGTGCAGGACAGGAAGCCCC
GAAGGGATGCGGCAACTGACAGATCAAGCTCGATGGAGGATGGGAGCCTGAGCAAGCGCGAGAACCAACGGTACAGATGA
TGATGGGAAGGACAGAAGAACGACGA---TGCCGAGCCGCCGGGACATGATCTGAGTTTGTCCGGAT-GGACTGCCTCTT
GCTAGATA-TGTACGTACGTATGGTACCATTAATTAACCAAGCATGTGGTGATTGCATTATTTTTTGGCCCCTGATTGGA
TCTCATAGTACTTATGATAC----ATAACCAACTCAACCCCCCTCCT---T-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCTCTTGATTGTATTATATGTGCGAGCATCGTTCTATGACAGTTC-TTGATATAC
TCACTTGTTGAACCGCACAAGTGCAGGCTGATGGTGTTCTCCTCTGACTTGTGACTTGTGACTAACACC-----------
--CCCAGCTGACGCTCATGGCAGTCTTAATGATAACCCACTAGCTAATTGCAAGTGTTGCTTTGTTTTTGTGCCCTCTGC
TACTGCTGATCTAGCAGCACTTGGTC-TTATGATTCCTGGCACTGGAAGATGAGGCAGTGATCATGCCTCCTTGTT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CTTGCTGCTGGCT----GCACGTGAGGTCACATGCCATTTGCACCATGCACA
CTCTCTGATGAAGAT--------------------AGATGCTGACAAAGCCATTGTTGTTTATCATCATCGCCAT-----
------TGGTTTGG-----CTGAATGCTCTTTTTGGCCGTCCACTGTACCGCATCTGGCGACTCAGTAAAAACAGCATCT
----GGGCCAGTCCTTGTCGGCTTCGTCCTGTCCTG-------------------------------------
>chr4B_1
ATATATATATATATTCCAATATAAAAAGAAC---TAAAGAGGTAGATCCACCTAATCTCAGCCGTCAAACGAGGTCAATC
CAATGACCTAGACTACTCCAATGACGAGCGCTCAATATATTTAGCGTTGCAATTAATATCATGCCAAATATAAAACGCCA
GTGTTAATCACATAATT---------ATG---ATATCCTACCCAATATCCATGTGCAATTCATATACCACTGCATAATAT
CAACGTGCATGCA---CGTACACAATTACTAGTATGTATAAATCACACAATCCCATTAATTGACACCCTAGCAC--ATTT
CTAGTGCTACATTTAACATTCTATTCCCAGTAAAAA--TCAACAATGGCAAC-ATTTTGGAACGTATGGCACCCAACCAC
CAACCAACACAAATCCTATTTAGAACAAAAGATCCCACCGCCATATTGA-TCCAAGTGGTGATAAAGCACACTCTTTGAT
-TCACAAAGCAAAAGACATAGACAACTAGGCAAAAATGAAGTGTTTCAAAAGGTGATTGCACGATAACACTAGCTGACTA
GCACTAATACACTAATAATCCTTGACAAAAGTTGAACTGTATACAT-------TAATAAAACCAGTAAATAAATCCAT--
--AAAAATGGCACCATGGCTTGGCTTGGCTTTCACACATTCTTTTCC-AAAAGAAAGATGAGATACATCTCATGGCGCCC
ACA-------TTTAAAGACCGATCCCAAAACCATATCCGGCTTGCCTCTGGCCCCACCACAGCGCCACAGTGACCTCACT
GCTTCTGGGTCCACAGTTATCCGGGCCCACGTGTCATTGAACGAGCGCAACAGGCTGACCAGTAACGGCAGAACCCTGCG
T---CTCTACAAAATGCTAACCCCACACGTCAAAGCCTACCCACGCCGGACGCTCCCCTGCCTCCCGAACCAATCTCCCG
TCGAGTCAGACGCGCATGTAAGCGGCCGGAGAAGAATCCCAACCTCCCAAGCGACTCTGTCCCATCATCACCATCGCCGC
CGTCAGCAGCTAGAGCCGTGGCGATGGCGGTGGCAGC---GGGGAGGAGGCTGCTGCTGCAGTCGGAGGCGCCGCGGCGC
CAGCAGCAGCAGCAGGCGGCGTCG---CCGTCGCCGTGGAGCGCGGGGTACCTCAACACGTGGCTGTCCCAGCGCACGCC
CGTCTTCGGCCTCCGCCTCTGGGTGCTCATGGGCATCGCCGTCGGCGCCGCCATCGTGCTCGTGCTGCTGCTGCTCTTCC
TCTGCCTCTCGCGCCGCCGCCGCGGCCGCCGCGCGGCCAATCTCTACCACCCCGCCGACGCCAAGCCCCTCAAGCAGCAG
CAGCAGCACTTGCAGCACCACCACGCGCCCACGCCGGCCAAGGACATCCAGGAGATCGTGCGCCGGCAG------CAGCA
GCCGGCGCCGACCCCGCTGCCGCAGCCCGCCGCGGTGCAGATGGCCAAGGCGGAGCCGCCGCCGCCGCCGCAGGCGCAGG
CGCAG------ACGCTGCAGCAGCAGAGGGCGCAGCTCCCGGCGATGCCCGCGGGATCCAAGCGCTCGACGGCGGCCAGC
GGCCTGTCGGCCACCACGAGCGGCGGGAGCGAGCGGGACCTGGCCACGCCGAGGAGCGCCGGCAGCGGCGCGGCGGGGCC
GGAGGTGTCGCACCTCGGGTGGGGCCACTGGTTCACGCTCCGGGAGCTCGAGGAGGCCACCGACGGGCTCGCCGAGGAGA
ATGTGATCGGCGAGGGGGGCTACGGGATTGTTTACAGAGGCACGCTGCAAGATTCCACCATCATTGCCGTCAAGAATCTG
CTCAATAATAGGTAACCTCGTGACCTCATGTCTCGAAAGCTTCCGCCTCTTCTTCCTCCTTTGAACTGTTCGATTTGAAT
CG-AACAGAAATCTCCTACGTTTCGATGCTCCGGTGAGCGCTTGAGGGTCGAATTTCTGTGTTTTGGTCCGT--TCATCG
AAACAAATCCATCGGCCGGAGTT------------------ATTTGATTTGGGGGAAACGAATATCTTGGTAGCAAACTG
CATCGTGCGAGTTTGATGGATGGATACCCATCTACTGCCTTTCCCACTGAAGAAATACCAATCTTTTGCCATGATTTCGT
TCTAGTTTTTTTCATGAAATTGTTGTGCTATGCTGATGAACTGTTGGATTGTGGGGCTCAATAAAAATTTAAAATTACTG
T------CATCATTCACTCTCTTTCTGTGTGCCCATCTGCATTCGATTCTTCTCGTTTCCCGTGGCTCATTTTAAATACT
GCACACAATTCTATGGCTCGATTCGCTGTTCCATTTCTCACCCCATACTACTACTCTGATATCCATGTCTCTGATAAAAA
TATCCATTTCTCCC--------------------TCCCTGTTTTTCCACCAGGGGCCAGGCCGAGAAGGAGTTCAAGGTG
GAGGTCGAAACGATCGGCCGTGTCAGGCACAAGAACCTCGTCAGGCTGCTCGGCTACTGCGTCGAGGGTGCCTACAGGTA
CAATGCATT-GCAATGTCTTGCTCAATTTCTGAATCAATTTCCGAATTTCTCTTCTAATGTGGTTGGATTTGGACAGGAT
GCTTGTCTACGAGTATGTCGACAACGGCAACCTTGATCAGTGGCTTCATGGAGAGATTGGGGAGGAGAGCCCATTGACTT
GGGATATGAGGATGAACATAATTATCGGAACTGCTAAAGGGTAATGCTTCTTCACTGTCATTTCACCTTACTAAGTGGGT
TTGCCAAGTGCTATTTCTTGGACTATAATCTTCCT---CATTCTATAGTTTAGCACC-ATCTGTATATACAGTGGTTACT
GTG-----------TGTGACTGAAGAAATAAACCAAATATAGGCCATGAGCATTTTAG-TTCTTAGAAGACATGGGTGCT
AGCTGGCATGTTTAGGCCTGTTCTGTTACGAGACATGCGTCTCGGTTAGGATGATGGAGCCGAGTTCTGGTGAGATTCTC
TGTCCCAAGGAATTCAGATGCTTCACTCAGAAGTTGTTAGGACCTACTCCCTCCGTCCGGAAATACTTGTCATTGAAATG
GATGTATCTAGATGTATTTTAGTTGTAGATACATCCATTTTCATTCATTTTGATGACAAGTAATTCCGGACGGAGGGAGT
ATTTCTTGACATGCACATATTCCTCTTTAAGAGGTTAGAGAAAGAGACAACTGATTGCAACCTATGTTTCTCAGATATGT
AAAAATCATGGTACTAGCGTTTCATTCTGCTCCCTCCGTCCCATAATATACGAGTGTTTTTTACAATATAAGAGCGTTTT
TTACACTACACTAGTATAAAAAACGCTAGTATAAAAAACGCTCTTATATTATGGGACGGAGGGAGTACTTCTGAAAACAA
TTTGAATTTCATACCCATATTTAAATAGGAGAAAAAGGTCTTTAGTTTCTGAGACATGGCATGTGCTTATCTTGCATGCC
TCCTTCCCTTTGCTTTCCTGCTGCCAGCTTTATTTTAAACAGAGCACCCGGTTGGAGATAGTTTGAGGTTCTCCCTCTAG
CACCCTAATGTAGTACTCCCTCGTCCGAAAATACTTGTCATCAAAATGGACAAAAAAGGATGTATCTAAAACTAATATAC
ATCTAGATACATCTTGTTTTATTCATTTTGATGACAAGTATTTCCGGATGGAGGGAG---TAGTATTTGTTAATATTTTG
TTTAGCTTGCGTATGTTTATAGAATAGAACATTGTGGTTCTGTTTAGCGGTCAAAGCCTGAACTGAAGCATCATGTGCAC
TGGCAAGCACTCTAGCTGTTATATTCTTTGCCTGGAAGTAAT---ATTGCCAGTGGTTTGCTTAAACAACCTCAACAGCT
CTGTTGAAAGCTGGATGTGATAGGAAAATTGCTTG-CCTCTGACACCCGATTTTGCTTGCCCAGGCTGGCCTATCTCCAC
GAAGGGCTGGAACCGAAGGTTGTCCACCGTGACGTCAAATCTAGCAATATTCTCATCGACAAGCAGTGGAATGCTAAAGT
ATCGGATTTTGGGCTTGCGAAACTGCTGTGCTCGGAGGAAAGCTACGTTACTACCCGTGTTATGGGAACTTTCGGGTTAG
TGTCAATAGTCTTTTAGTGCTCAGTGATTCAGCAAAGGTTGTTTGTATCTTGTCATGACCGAACCTTTCG-TTTTATGTT
GCAGCTATGTGGCGCCTGAATACGCCAGCACCGGGATGTTAACTGAGAGGAGCGATGTGTATAGCTTTGGCGTTCTTTTG
ATGGAGATTATAACTGGTAGATCTCCTGTAGATTATACTAGGTCAGCTGGAGAGGTTAGTTTTTTTTTTCTTTGCCCATT
TTTGGTAGTTTCTTTTCAGAATTGTGGAGGCGG-CCCGATGAAGCTAAATTCTTGTATTTTCCAGGTGAACTTGATCGAA
TGGCTGAAGAACATGGTGGCAGAGAGGAAAGCAGAGGACGTAGTCGACCCCAAGCTTCCCGAGAGGCCTTCCTCGAAAGC
ACTGAAGCGGGCTCTTCTGGTCGCCCTTCGCTGCGTCGACCCCGATGGCCATAAGCGGCCTAAAATGGGGCATGTGATCC
ACATGCTGGAGATGGAGGACCTAAACCCCCGCG---ACGTATGTTCCTTCCTACTTACTATCTCAGCAGCCTTGCTATAA
TCTCTCATTCGCTCAACATCAGTGCTCAGTCACTCACATTGTCAACCGCGATGAATGAAATGTGCAGGACAGGAAGCCCC
GAAGGGATGCGACGACGGACAGATCCAGCTCGATGGAGGACGGGAGCCTGAGCAAGCGCGAGAACCAACGGTACCGATGA
TGATGGGAATGGCACAACGACGACGATGCTGCCGAACCGCCGGGACATGATCTGAGTCTGTGCGGATCGGACTGCCCCTT
GCTAGATAATGTACGTACGTACGGGTACC---ATTAACCAAGCATGTCGTGATTGCATTATTTTTTGGCCCCTGATTGGA
TCTCATAGTACTTATGATATACTTATAACCAACTCAACCCCCCTCCTCCTT-----------------------------
--------------------------------------------------------------------------------
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-------------------------GCTCTTGATTGTATTATATGTGCGAGCATCGTTCTATGACAGTTCTTTGATATAC
TCACTTGTTGAACCGCACAAGTGTGGGCTGCTGCTGGTCTGGTGTT-CTTCTGACCTCTGACTAACATGCCTTTTCCTTG
GTCCCAGCTGACACTCATAGCGGTCTTAATGATAACCCACTAGCTAATTGCAAGTGTTGCTTTGTTTTTGCGCCCTCTGC
T---GCTGATCTAGTAGCCCTTGATCCTTATGATTCCTGGCACTGGAAGATGAGGCACTCATCATGC---------TGCA
TGCCTTGTTGAGATGGTGTTTGTTTCTCTAGTCCTAGGACTTTTTAAAAAAGACTCTCAAGGAGGTGCTTCTAAGGACTT
TTAGCAAAAAGTCCCAAAAAAGTCCCATCATGTTTGGTTTGGTAGGGACTTTTTCTAGTCCCTGCACCAAAAAGTCCCTG
GAAACAAACACCACCTGAGTTGTTGTGGCTTGCTGCTGGCTGCATGCACGTGAGGTCACATGCCATTTGCACCATGCACA
CTCTCTTTCACTTTTCTTTTCTCTCTCCCCGATGAAGATGCTGACAAAGCCATTGTTGTTTATCATCATCGCCATTGCCA
TTGGTTTGGTTTGG-----CCGAATGCTCTTTTTGGCCGTCCACTATACCGCATCTGGCTGCTCAGTG-AAACAGCATTT
GGGCGGGCCGGCCCTTGTCGGCTTCGCCTTGTCCGTC------------------------------------
>SNPs
----S----------------------------------------------------------------S----------
S-----------------S----SS-------S----------------S----S----SS-------------------
--------S------------S---S--------------------------------------------SSS-------
---------------S-------------------S-------------------------S----S-------------
------------------------------------S-----------S---S----------S----------------
----S----------------SS-------------S---S-----S---------------------------------
--------------------------S--------------------------------------S-SSS-S--------
----------------------------------------S----SS--S----------------------SSSSSS-S
SS-----------------------------------------------------------S-----SSSS---------
-------------------------------------------------------------SS-SSS-------------
--------------S----------------------S------S--------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
---------------------S--SS---------------------S--------------------------------
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--------------------------------------------------------------------------------
-----SSSSSS--------------------------S------------S-----------------------------
--------------------------------------------------------------------------S-----
------------------S-----------------S---------------S---------------------------
----------------S---------------------------------------------------------------
----------------------------S---------------------------------S-----------------
--------------------------------------------------S-----------------------------
--S----------------------------------------------------------------S------------
-------------------------S-SSSSS-SSSSSS-----------------------------------------
------------------------------------------------------------------S---S--------S
--------S--------S--------------------------------------------------------------
-----------S--------------S-------------S---------------------------------------
------------S-------------------------------------------------------------------
-----------S--------------------------------------------------S-----------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------SSS---------------------
------------S-------------------------SS-----S-----------S----------------------
------S---------------------S-------------S-------------------------------------
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--------------------------------------------------------------------------------
--------------------------S-------------------------------------------S---------
---S-----------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S------------------------------S-------------
--------------------------------------------------------------------------------
---------------------------------------------------------SSS--------------------
------------S-----S-------------------------------------------------------------
------------------------------------------SSS-----------------------------------
----------------------------------S-------------------S-----S-------------------
-----------S-----------S--------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------S------SS---S-----
-------------------S------------------------------------------------------------
--------------------------------------S--------------------S-------S-S----------
---------------------S-----------S---------------------------S--------------S---
--------------------------------------------------------------------------------
------------S-----S--------S-----S----------------------------------------------
---------------------------------SSS--------------------------------------------
---------------S----------------------------------------------------------------
-----------------------------------------------S--------------------------------
---------S-------------------S------------------------S----------------S----S---
------------------S-----------------------------S-------------------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS----------------------S--------------------------------
-----------S----S----------SSS--------S-----------------------------------------
-S-SS-------------SSS--------------------S-----S--------S--SSS-SS--SSS-SS-------
-------------------------------------------------------------------S-SSSSS-S----
----------SSSSSSSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-------------------------S---------
--------------------S----------------------S-----------S-----------S------------
--------------SSSSS---------------------------------------------S---------------
------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_845
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-------------------------CCCACGTGTCATGGAACGAT-----------------------------------
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>reverse_2003
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--GCAAATCCATCGGCCAGAGT----------------------------------------------------------
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>forward_1777
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-----------------------------------------------------------------------------AGA
ATGTGATCGGCGAGGGA---------------------------------------------------------------
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>reverse_3556
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-----------------------------------CAAACAGAGCACCCGGTTTG-------------------------
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>forward_2492
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------------------------------------------------------------------------TCAAGGTG
GAGGTCGAAACC--------------------------------------------------------------------
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>reverse_4235
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--------------------------------------------------------------------------AATGTT
GCAGCTATGTGGCG------------------------------------------------------------------
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>forward_4012
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------------------------------------------------------------------------ATCTTCAC
GAAGGGCTGGAG--------------------------------------------------------------------
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>reverse_6124
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-------------------------------------------CTTAACCATGCCCGTCGTCT----------
