>input_sequence_21833
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--ATGGCCAACCTCCTGCACCTCCCGGACCTCGCGGCGGCCCGGCCGCCGGCGGCCGGCGTCGCGCGGAGAAGGGAGGCG
AGGGTCGTGGCGGCTGCCAGGGCCGGGGGCCGCGTGAAGCAGGAGGAGCCCGGGACGGGGACGGGGAGGGGGCGGGTGAT
CAGGGTCACGGACCCCGTGCGGAACGGGAGGCTGCCGGTGCCGGCGCCCCCGCCGCTCTTCTCCGTGCCGATGACGCCGG
CCTCGGAGTCGCCGGCGGCGACCACGCGGCGGGACGACGACGAGGAGGAGCGGCGCAGGTACTACCTCAACCTGGGCTAC
GCCATCCGCACGCTCAGGGAGGAGATACCCGACGTCTTCTACAAGGAGCCCAGCTTCGATATATACAGGTCCGTGCCCAT
GTTTCATTGCTTCTCTTTGTCTTCACTTTGAGAACCTTTCAGAAACTTTTATATTTGAAAAATACAAAAACAAAGGATCA
ACTGTTAGGTGGAACCCTGGTAAATTTAGGGGTGAAATTGG--------------------------------------T
GTGGCTACTTCATAAGGGATTGGTCTGTGGCAGACTGGCA--------TCAGCTTCTAATTAGAACATGCTACATGCATA
TTTCGCTGCAGATATCTCTCTGGGTTAAGTAGTTGTGCCGACGCAGTAATTATTTGATTGCCATTGACCGATGTTGATGG
CTAGATTGCCTCACAATACCGCATCTCTTCTAAATTGAAATTATGATCTAGCTTAGTCTTTCAGTACTCTTCACACCTAT
CTAGTGTTGGATGTTTTTCGAGATGGGATGGATGACCTGGGCAGCGCAGCTACTATTGGGCTATCAAGCATCAGAAGAAC
CACATTTCAGAAACCATCTAATGAAGCTTAGGTTTTATCTCTATATAATGTTAATTAGGATATGGTTTGTCTTGTGGATG
TGAGTAGGACCTCTTTACTTGTAGAACTACCCAATGCATTCCTCAAGAGATTCAGAGATTCATGTTCGAGGCAGTAGCGT
TGGCCCTCTAGTGTTGATTCTGAGTGGACATTGGTACAATGAACTGAAATGTGGACTGGAGAGCAGAGTATATGTGCGAT
AGGCTTGACTCAGTAGTGTGAGGCTCTTGTACTAGATTCACAATATGGTGGCATCTATCTTTTCTTCTTTATTATGCACA
CGGTTAG-CCTCTACATTTTATCTGTTTTTTTTC-CTTCTGTTGCAGAGTTTTGTTTTGTTTCTTTATCGGGAACTAGTA
AGTTAATTAGTGTAATAGAAACGCATCCTTGCTTCTAAAAGAACCAGTGGTGCATGGTTAGGGAGGAAGAGATGACCAGG
CTGATCAAGTTCTAAAGTAGGTTCTTTCTTGTTTGCGCCGATCATCATCGATCTATGGTGATAGCTTAGCGCTGTAGTTG
CCCTTTTGGCCATTTTCTTTGTTTTGCTCTGCATTTTATAGAGGGTTCCTGCATCCATTTTCCCTATCTTCTGTTACTTG
TT--GGGAGCTTTTATCCTCGTAACACGGAGACAGTCAGTTCTCCTGCTTGTTCTCCTTAAAAATACAATCTAATTCTGG
TTAGTGTGTGTTTTCTGGTTTGGTTGGGATGTAATGATATCTCTTTCTTGTTAGCATACTGTGGCCATCTTGTTTAATAA
TTATCAATTAATGCAAGCAATATGACATTTGCTTGAGCTTATCTTATCCATTTAGCGTGTTGTCTAATCTACGATGCAGA
CTGGGAGTGGGACCACACATTTATAAACACGACCCAACATCAGTTGCTTACATAAGTGTTTCTTGCATTAACCTTATCAG
TATGTCAGTTGTCCATTAGAGTTTATATTTTATTACTGCGATCATGAGGTTATCCCCTGCAATAATGCAAAAGAGCCGTT
GCTAAGAGTATCTTTTGTATGTGGGACTCGGGTGTAAAGATTAGAGGGGGTGAGGCTAGCTAAATTATTTGATGAACCGG
TTCTAGTTTGAGGATCGAGTCTAAGCAAATAAAATGATTGAATGGGTGCAATGTCAGTTTGCAAACTCAC--GAGATAAA
TATGCTAGTGCTCAGAAAAACGTAGAGCTGATTGTCTTTCTGCTAACTAGTGGGTCCTACAGCCAGGTCAAAGACATTGT
AGCAAATTTTGCTCTGCTAGACTCTCTATGGGTGGCAGACTTCATCTCAACAAAATCCTCAGCACATTGCCCATGCCCTA
ACCATTTAAG-TACATCCAAATCATACAGTACTTTTCTTGCATCTTTAAGCTGCCTTCGAAGTTCGAATATTCACTGAAC
TTAGGGGCTGTTTGGTTTGAGACTAAGTTTGCCTAAGGTTGCCACGC-CAACGTTAAGCAAGTTTGACCAACTTAGTTGG
GCGTTTAGTTGCAGCCACATCTTAGGAAAAATGCTTTTTGCCACACTAGGGCCCCAATCACATCCACTCACAAAGTGTGG
CAAGATTCCCTTAGGCTTGCCAACTTGTGGCTCCAATTTTGTTGAACCAACCTTAGGCAAGTTTGGCAAAAACTTGTGGC
AAAGTGTGGCAGTGCTAGGCCTAGAACCAAATTAGCCCCCAAGAGAAACAGAAAAATACAATATTTTGTATCTGAATTAC
GAGGTTACTATTACACCTGCATGTTTAATTGCTCGATCTTGGCTCTGTTCGAACTTTAGCATGTATTTCTAATGCTTTGC
AGTTGCTCACATGAGTTGAGTAACTTGGGCCTGCATCTGTCTTCCATTCTAAGTAACTTATTATGTTATGCAGAGTACAT
TGCACGAAGGTTGCATTTTCTTGTACAGATTTGTACTGTTGAGTCTTGTCATTGGTCTTTCCCTAATTCTGTTTGTTGCT
ATTTGCCAGAGATGATATCGTCTTCAGAAACCCTTTCAATAAATTCGAGGGCATTGACAATTACAGAAGTCTATTCTGGG
GATTGCGCTTTACTGGACGTATCTTCTTCAAAGCATTATGGGTTGATATAGTTAGTATATGGCAGCCTGCCGAGAATCTT
ATTATGATTCGCTGGATTGCCCACGGCATTCCTAGAGTCCCATGGGATGGCCATGCCCGCTTTGATGGTGCCTCCATTTA
CAAACTCGACAGGAATGGGAAGATCTATGAGCATAAGGTACACAACATTGCTACGAACCCACCGACAAAGTACAAGGTCC
TGTCTGTTCAAGAGCTAGTCAGATCACTTAGCTGTCCGTCCACTCCAAAACCAACGTATTTCGAGGCTTCATCTCAATCT
TTGAGCACGGCGTCACTTTATTCAAGGTTGGCATGGATCAGACGCTTAGCAAATCTCAGAGGAGGATAG-----------
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--------
>chr3B_1_TraesCS3B01G174500
TTATATAGCGGCAACCCCCCTTTAGGGTTTGGTGTGATCATTCCCACGTTTCCCACTAATGGGCCCTAGGCCTATACGAC
TGAGGAGGGGGCATGTCGTATGTGATCCCTTTGCCTCGCAATATACGTCGAGCTCAAGGCGAGGTTATCATCCTTGTTTC
CAGGTCAACCCCCTTCTCTTTGTCATGCATAGCACTCCACAAAATATGATTAACACCTTAATCATAAGCATGCCCATGCG
TTTCC--AAAAACTGAACACTTAGAGGGCCTAAGAAACGCCACCCCCATCACCGGAGGGGCAAATCCCATCTTGATCAGT
CTACGATTTACGACATGCTTTACAGTAAATCCGAAA--------------------------------------------
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---------------------------------------------------------------------TCCACCTTCAT
AATAACCTAGTTTAGAAGCAAGGAAGGCTTCATCCTAATCGCCTCACGAGAGGATACTGCAAATTAACCATAGCTTGTCT
CATAACATTTGCATATTCACGTAGATACATCGAAATGGTCAAAGTTGTTTATGATCAGAGACCGCGAGATCTAGTAAAAC
TTAACGAAGTGAGTATTCGCAAAACATGTT---GTTTTCAGTTGGAGGATAATGTTTTGAGAAAGACATAACCGGACATG
TAGCTTGTTGTTCATCTTCAGAAATGCCCACGGACAGAGACACCGGCAGCAAGCAGATGCAC-AAGCCGCCCCAGACTCG
GCAGATATTTCCATTTTTCTAAAAGAAAAGGGGGGGAGACTCGGCAGATATTCTGCTACGCGTCGTCCTCAAAATAGAGA
CACGCAGCAAGCCAAACGAGCGCGCCATCTGACGCCACGCTCGCCGCGGAACAGAATATCCAAAACCGAACTGGAAACGG
ACCGAACAAATACCCAAGTCAAATGAAATGACCCTTCTCTCCTCCGCTCCGCTCCGCCCCTCTCTCACGCAGTTCACACA
CTCCTCTCCCTCTC---CTCCTCTCCTCACCCCACCAAAACCTAAGCAAGAAAGGCCAGAGGAGCTCCGAATTCGGGCTC
GAATGGCCAACCTCCTGCACCTCCCGGACCTCGCGGCGGCCCGGCCGCCGGCGGCCGGCGTCGCGCGGAGAAGGGAGGCG
AGGGTCGTGGCGGCTGCCAGGGCCGGGGGCCGCGTGAAGCAGGAGGAGCCCGGGACGGGGACGGGGAGGGGGCGGGTGAT
CAGGGTCACGGACCCCGTGCGGAACGGGAGGCTGCCGGTGCCGGCGCCCCCGCCGCTCTTCTCCGTGCCGATGACGCCGG
CCTCGGAGTCGCCGGCGGCGACCACGCGGCGGGACGACGACGAGGAGGAGCGGCGCAGGTACTACCTCAACCTGGGCTAC
GCCATCCGCACGCTCAGGGAGGAGATACCCGACGTCTTCTACAAGGAGCCCAGCTTCGATATATACAGGTCCGTGCCCAT
GTTTCATTGCTTCTCTTTGTCTTCACTTTGAGAACCTTTCAGAAACTTTTATATTTGAAAAATACAAAAACAAAGGATCA
ACTGTTAGGTGGAACCCTGGTAAATTTAGGGGTGAAATTGG--------------------------------------T
GTGGCTACTTCATAAGGGATTGGTCTGTGGCAGACTGGCA--------TCAGCTTCTAATTAGAACATGCTACATGCATA
TTTCGCTGCAGATATCTCTCTGGGTTAAGTAGTTGTGCCGACGCAGTAATTATTTGATTGCCATTGACCGATGTTGATGG
CTAGATTGCCTCACAATACCGCATCTCTTCTAAATTGAAATTATGATCTAGCTTAGTCTTTCAGTACTCTTCACACCTAT
CTAGTGTTGGATGTTTTTCGAGATGGGATGGATGACCTGGGCAGCGCAGCTACTATTGGGCTATCAAGCATCAGAAGAAC
CACATTTCAGAAACCATCTAATGAAGCTTAGGTTTTATCTCTATATAATGTTAATTAGGATATGGTTTGTCTTGTGGATG
TGAGTAGGACCTCTTTACTTGTAGAACTACCCAATGCATTCCTCAAGAGATTCAGAGATTCATGTTCGAGGCAGTAGCGT
TGGCCCTCTAGTGTTGATTCTGAGTGGACATTGGTACAATGAACTGAAATGTGGACTGGAGAGCAGAGTATATGTGCGAT
AGGCTTGACTCAGTAGTGTGAGGCTCTTGTACTAGATTCACAATATGGTGGCATCTATCTTTTCTTCTTTATTATGCACA
CGGTTAG-CCTCTACATTTTATCTGTTTTTTTTC-CTTCTGTTGCAGAGTTTTGTTTTGTTTCTTTATCGGGAACTAGTA
AGTTAATTAGTGTAATAGAAACGCATCCTTGCTTCTAAAAGAACCAGTGGTGCATGGTTAGGGAGGAAGAGATGACCAGG
CTGATCAAGTTCTAAAGTAGGTTCTTTCTTGTTTGCGCCGATCATCATCGATCTATGGTGATAGCTTAGCGCTGTAGTTG
CCCTTTTGGCCATTTTCTTTGTTTTGCTCTGCATTTTATAGAGGGTTCCTGCATCCATTTTCCCTATCTTCTGTTACTTG
TT--GGGAGCTTTTATCCTCGTAACACGGAGACAGTCAGTTCTCCTGCTTGTTCTCCTTAAAAATACAATCTAATTCTGG
TTAGTGTGTGTTTTCTGGTTTGGTTGGGATGTAATGATATCTCTTTCTTGTTAGCATACTGTGGCCATCTTGTTTAATAA
TTATCAATTAATGCAAGCAATATGACATTTGCTTGAGCTTATCTTATCCATTTAGCGTGTTGTCTAATCTACGATGCAGA
CTGGGAGTGGGACCACACATTTATAAACACGACCCAACATCAGTTGCTTACATAAGTGTTTCTTGCATTAACCTTATCAG
TATGTCAGTTGTCCATTAGAGTTTATATTTTATTACTGCGATCATGAGGTTATCCCCTGCAATAATGCAAAAGAGCCGTT
GCTAAGAGTATCTTTTGTATGTGGGACTCGGGTGTAAAGATTAGAGGGGGTGAGGCTAGCTAAATTATTTGATGAACCGG
TTCTAGTTTGAGGATCGAGTCTAAGCAAATAAAATGATTGAATGGGTGCAATGTCAGTTTGCAAACTCAC--GAGATAAA
TATGCTAGTGCTCAGAAAAACGTAGAGCTGATTGTCTTTCTGCTAACTAGTGGGTCCTACAGCCAGGTCAAAGACATTGT
AGCAAATTTTGCTCTGCTAGACTCTCTATGGGTGGCAGACTTCATCTCAACAAAATCCTCAGCACATTGCCCATGCCCTA
ACCATTTAAG-TACATCCAAATCATACAGTACTTTTCTTGCATCTTTAAGCTGCCTTCGAAGTTCGAATATTCACTGAAC
TTAGGGGCTGTTTGGTTTGAGACTAAGTTTGCCTAAGGTTGCCACGC-CAACGTTAAGCAAGTTTGACCAACTTAGTTGG
GCGTTTAGTTGCAGCCACATCTTAGGAAAAATGCTTTTTGCCACACTAGGGCCCCAATCACATCCACTCACAAAGTGTGG
CAAGATTCCCTTAGGCTTGCCAACTTGTGGCTCCAATTTTGTTGAACCAACCTTAGGCAAGTTTGGCAAAAACTTGTGGC
AAAGTGTGGCAGTGCTAGGCCTAGAACCAAATTAGCCCCCAAGAGAAACAGAAAAATACAATATTTTGTATCTGAATTAC
GAGGTTACTATTACACCTGCATGTTTAATTGCTCGATCTTGGCTCTGTTCGAACTTTAGCATGTATTTCTAATGCTTTGC
AGTTGCTCACATGAGTTGAGTAACTTGGGCCTGCATCTGTCTTCCATTCTAAGTAACTTATTATGTTATGCAGAGTACAT
TGCACGAAGGTTGCATTTTCTTGTACAGATTTGTACTGTTGAGTCTTGTCATTGGTCTTTCCCTAATTCTGTTTGTTGCT
ATTTGCCAGAGATGATATCGTCTTCAGAAACCCTTTCAATAAATTCGAGGGCATTGACAATTACAGAAGTCTATTCTGGG
GATTGCGCTTTACTGGACGTATCTTCTTCAAAGCATTATGGGTTGATATAGTTAGTATATGGCAGCCTGCCGAGAATCTT
ATTATGATTCGCTGGATTGCCCACGGCATTCCTAGAGTCCCATGGGATGGCCATGCCCGCTTTGATGGTGCCTCCATTTA
CAAACTCGACAGGAATGGGAAGATCTATGAGCATAAGGTACACAACATTGCTACGAACCCACCGACAAAGTACAAGGTCC
TGTCTGTTCAAGAGCTAGTCAGATCACTTAGCTGTCCGTCCACTCCAAAACCAACGTATTTCGAGGCTTCATCTCAATCT
TTGAGCACGGCGTCACTTTATTCAAGGTTGGCATGGATCAGACGCTTAGCAAATCTCAGAGGAGGATAGGGTGGGTCTTA
GCACGATACTTACAAAATCTACCTTTTTGTTGTATTGTAGTCACCAGTCACTGATGAGTAGTACTGAATCATAACTGTTG
TATATATGTACAGAGACAAATTTATACAGAATAAAGTTGCTCTTGGTTGAGCTGTATGGACTGCAGTGCTGCATATGTTT
GTGAGCAAGCTAATTTGGGGGCGTGCCTGCTCCGGTTCCCTGAAGTCGCCGACCTGGACATTGCAACGGTCTCCAAAACA
GCGAATTTGACAACTAGTTTTATTGCAGTATTATATCTATAAATCCCAGACTAAAT--TATATATTGTGAAGCATATGAA
GTCCAGCATTATTATATCTATGAATCCAGACTAAAATCATATATTGTGAACCATGTCAAGTCCAGCATTCTTTGTGTCTA
TTTTGTCATGTTATAAATACTCAGAACAGAATGGTTGAGTAAATCAACTGGAAAGAACAAAGGTGCAGCGTTCCCTTGTC
TAAGATCTCACAAAATCATGCGCCAAATTCATCTAGCACGACGCCAATAGCTGCACCAGCCATGTCTAAGAACTTCTACA
CTATCACGCGCACAGCT--GAAGGTTAATCAGCAAAAGCATGACGAGCAGTAGCAAAGATGTACGCTAATACGTTTAGGA
GTTTTCTTTTCTTGAACCGAGTTTAGGAGTTTGTTAAATTTTAACCATTGCGCTAAGCGGTGGTACCATGTTCAAAATCC
ATGTATCAAGGACTAATGCGCATAC--TTTAAGATAACAAAACATGGTGTTTTATGGTATGGACTTGCGACACATCCACA
TTCTTTCTGACAGTCATATTATTACGCGGTACACAAGTTCAGTTTCTA--------------------------------
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-----------------CCTTC-ACCATGACATAAGACATCAAGCCCTCAAACTTCCAAGTTTGGCACAAATAACCACCA
ATCCTTTAAGCATTGGATGGATATAGGGCAGAATCAGGATGA---CAGTAAATATTCATGGCCAACAGTTGATTTGATCA
TCAACAAA
>chr3A_121
ATATAT--------------------------------------------------------------------------
----------------------------------------------GTCAAGCTCAAGGCGAGGTTATCATCCTTGTTTC
CAGGTCAACCCCCTTCTCTTTGTCATGTATAGCACTCCACAAAAT--GATTAACACCTTAATCATAAAAATGCCCATGTG
TTTCCAAAAAAACTAAACACTTAGAGGGCCTAAGAAACACCACCCCCATCACCGAAGGGGCAAATCCCATCTTGACCAGT
CAACGATTTACCACATGCTTTCCGGTAAATCCGAATTCCACCTTTATAATAACCTAATTTCAAAGGAAGGACGGCTTCAT
CCTAATCGCCTCGCGAGAGGGTACTGCAAATTAACCATAGCTTGTTTCATAACATTTGCATATTCACGTAGACACACAGA
ATGGTCAAAGTTGTTTATGATCAGAGATCGTGAAGCGAGTATTCGCAAAACATGTTGTTTTCAGTTGGAGGATAATATTC
TGAGAGAGACAAAACCGGACCTGTAGCCTGCTGTTCATCATCAGAAATGCCCGCAAACAGAGACACCGATATGAAAACCT
TTTCCTGATGCCTCGGGACTCCTCGTCTGCGCTTGCCCCTTTAGCATCAAAGAGAAAACGAGGACGCTGCGCGCGCTGAC
GCCCGCCTGGTTCCAGTCATCATGGCTTGCGTCACAGAAACCTCGCGAGGTGTCTCTTGTCTTGATCTCTCTGCCCTCAC
GAGACAGTCTGATGAGGCCGCTCATGAGGAGGTCTTGCGTCGTCCACGTGAGGTTTGGCCTCTCGCGAGGGTCTTGAGTG
TTTGTTGAAAAAAATGGGCCGTATGGGGTCGCTGGTGGAGTCACGCTGCGGGTCGCAGGCAGGCAAATTTGGGAACCCCC
GTTCCCAGAACGCCGACACCCATCTTGACGAGTCTATGATTTACCACATGCTTTCCGGTAAATCCGAATTCCATCTTTAT
AATAACCTAATTTCAAAGCAAGGAAGACTTCATCCTAATCGCCTCGCGAGAGGATACTGCAAATTAACCATAGCTTGTTT
CATAACATTTGCATATTCACGTAGACGCACA-AAATGGTCAAAGTTGTTTATGATCAGAGATCGCGAA------------
--------GCGAGTATTCGTAAAACATGTT---GTTTTCAGTTGGAGGATAATATTCTGAGAGAGACAAAACCGGACCTG
TAGCCTGTTGTTCATCATCAGAAATGCCCGCAGACAGAGACACCGGCAGCAAGCAGATGCAC-AAGCCGTCCCCGACTCG
GCAGATATTTTTGCAAGAAGAC--AAAAAGAAA--GAGACTCGGGAGATATTCGGCTACGCGTCGTCCTCAGAATAGAGA
CACGCAGCGGGCGAAACGAGCGCGCCATCCGACGCCACGCTCGCCGCCGCG--GAATATCCAAAACCGAACTGGAAACGG
ACCCAACAAATACCCAAGTCAAATGAAATGACCCTTCTCTCCTCCGCTCCGCTCCGCCCCTCTCTCACGCAGTTCACACA
CTCCTCTCCCTCT-----------CCTCATCCCACCAAAACCTAAGCA----------GAGGAGCTCCGAATCCAGGCTC
GCATGGCCAACCTCCTGCACCTCCCGGACCTCGCGGCGGCCCGGCCGCCCGCGCACGGCGTCGTGCGGAGGAGGGGGGCG
AGGGTCGTGGCGGCGGCCAGGGCCGGGGGCCGCGTGAAGCAGGAGGAGGCCGGGACGGGGACGGGGCGGGGGCGGGTGAT
CAGGGTCACGGACCCCGTGCGGGACGGGAGGCTGCCGGTGCCGGCCCCGCCGCCGCTCTTCTCCGTGCCGATGACGCCGG
CCTCGGAGTCGCCGGCGGCGACCACGCGCCGGGACAACGACGAGGAGGAGCGGCGCAGGTACTACCTCAACCTGGGCTAC
GCCATCCGCACGCTCAGGGAGGAGATACCCGACGTCTTCTACAAGGAGCCCAGCTTCGATATCTACAGGTCCGTGCCCAT
GTTTCATTGCCTCTCTCTGTCTTCACCTTGAGATCCTTTTAGAAACTTTTATTTAAAAAAAATACAAAAACAAAGGATCA
ACTGTTAGGTGGAACCCTGGTGAATTTGGGGTAAAATTGGTGAGTGCTTCTAATTGATTGATTAGCATCGCTATCTGTTT
GTGGCTACTTCATAAGGGATTGGTCTGTGTCAGACTGGCA--------T--------AATTAGAACATGCTACATGCATA
TTTCGCTGCAGATGTCTCTCTGG-------------------------ATTATTTGATTGCCATTGACCGATGTTGATGG
CTAGATTGCCTCACAATACCGCATCTCTTCTAACTTGAAATTATAGTCTAGCTTAGTCTTTTGGTACTCTTCGCACCCAT
CTAGTGTTGGATGTTTTTTGAGTTGGGATGGATGACCTGGGCAGCGCAGCTACTATTGGGCTATCAAGCATCAGAAGAAC
CACATTTCAGAAACCATCTAATGAAGCTTAGGTTTTATCTCTATATAATGTTAATTAGGATATGGTTTGTCTTGTGGATG
TGAGTAGGACCTCTT-ACTTGTAGAGCTACCCAATGCATTCCTCAAGAGATTCAGGTATTCATGTTCGAGGCAGTAGCAT
CAGCCCTCTAGTGTTGATTCTGAGTGGACATTGGTACAATGAACTGAAATGTGGACTGGAAAGCAGAGTATATGGGTGAC
AGGCTTGACCCAGTGGTGTGAGGCTCTTGTACTAGATTCGCAATGTGATGGCATCCATCTTTTCTTCTTTCTTATGCACA
TGGTTAGCC-TCTACATTTTATCTGTTTCTTTTTTCTTCTGTTGC--AGTTTTGTTTTGTTTCTTTATCGGGAACTAGTA
AGTTAACTAGTGTAATAAAAACACATCCTAGCTTGTAAAAGAACCAGTGGTGCATGGTGAGGGAGGAAGAGATGACCAGG
CTGATCAAG-TTTTAAATAGGTTCTTTCTTGTTTGCGTCGAGCATCGTCGGTCTATGGTGATAGCTTAGCGCTGTAGTTG
CCCTTTTGGCCATTTTCTTTGTTTTGCTCTGCATTTTATAGAGGGTTCCTGCACCCATTTTCCCTATCTTCTGTTACTTG
TT--G--AGCTTTTATCCTCGTAACACAAAGACAGTCAGTTCTCCTGCTTGTTCTCCTTAAAAATACAATCTAATTCTGG
ATAGTATGTGTTTTCTGGTTCGGTTGGGATGTAATGATGTCTCTTTCTTGTTAGCATACTGTGGCCATCTTGTTTAATAA
TTATCAATTAATGCAAGCAATATGACATTTGCTTGAGCTTATCTTATCCGTTTAGCGTGTTGTCTAATCTACGATGCAGA
CTGGGAGTGGGACCAAACATTTATAAACATGACCCAACATCAGTTGCTTACATAAGTGTTTCTTGCATTAACCTTATCAG
TATGTCAGTTGTCCATTAGACTTTATATTTTATTATTGCGATCATGAGGTTATCCCCTGCAATAGTGCAAAAGAGCCGTT
GCTAAGAGTATCATTTGTATGTGGGACTCGGGTGTAAAGATTAGAAGGGGTGAGGCTAGCTAAATTATTTGAGGAACCGG
TTCTAATTTGAGGACCGAGTCTAAGCAAATAAAAGAATTGAATGGGCGCAATGCCAGTTTGCAAACTCTCATGAGATAAA
TATGCTAGTGCTCAGAAAAAGGTAGAGCTGATTGTCTTTCTGCTAGCTAGTGGGTCCTACAGCCGGGTCTAAGACATTGT
AGCAAATTTTGCTCTGCTAGACTCTCTATGGGTAGCAGACTTCATCTGAACAAAATTCTCAGCACATTGCCCATGCCCTA
ACCATTTAAATTACATCCAAATCATACAGTACTTTTCTTGCATCTTTAAGCTGCCTTCGAAGTTCGAATATTCACTGAAT
TTAGGGGCTGTTTGGCTTGAGACTAAGTTTGCCTAAGGTTGCCATGCGCAACGTTAAGCAAGTTTGACCAACTTAGTTGG
GCGTTTGGTTCCAGCCACATCTTAGGAAAAATGCTTTTTGCCACACTAGAGCTCCAATCACATCCACTCACAAAGTGTGG
CAAGATTCCCTTAGGCTTGCCAACTTGTGGCTCCAATTTTTTTGAACTAACCTTAGGCAAGTTTGGCAAGAACTTGTGGC
AAAGTGTGGCAGTGTTAGGACTAGAACCAAATTAGCCCCTAAGGGAAACAGAAAAATACAATATTTTGTATCTGAATGAC
GAGGTTACTATTAGACCTGCATGTTTAATTGCTCGATCTTGGCTCTGTTTGAACTTTAGCATGTATTTCTAATGCTTTGC
AGTTGCTCCCATGAGTTGAGTAACTTGAGCCTGCATCTGTCTTCCACTCTAATTAACTTATTATGTTATGCAGAGTACAT
TGCATGAAGGTTGCATTTTCTTGTACAGATTTGTACTGTTGGGTCTTATCATTGGTCTTTTCCTAATTCTGTTTGTTGCT
ATTTGCCAGAGATGATATCGTCTTCAGAAACCCTTTCAATAAATTCGAGGGCATTGACAATTACAGAAGTCTATTCTGGG
GATTGCGCTTTACTGGACGTATCTTCTTTAAAGCATTATGGGTTGATATAGTTAGTATATGGCAGCCTGCCGAGAATCTT
ATTATGATTCGCTGGATTGCCCACGGCATTCCTAGAGTCCCATGGGATGGCCATGCCCGCTTTGACGGTGCCTCCGTTTA
CAAACTCGACAGGAATGGGAAGATCTATGAGCATAAGGTACATAACATTGCTACGACCCCACCGACAAAGTACAAGGTCC
TGTCTGTACAAGAGCTAGTCAGATCACTTAGCTGTCCGTCCACTCCAAAACCAACATATTTCGAGGCTTCATCTCAATCT
TTGAGCACGGCGTCGCTTTATTCGAGGTTGGCATGGATCAGACGCCTAGCAAATCTCAGAGGAGAATAGGGTGGGTCTTA
GCACGATACTTACAAAATCTACCTTTTTGTTGTATTGTAGTTACCAATCACTGATGAGTAGTACTGAATCATAACTGTTG
TATATATGTACAGAGACAAATTTATACAGAATAAATTTGTTCTTGGTTGAGCTGTATGGACTGCAGTGCTGCATATGTTT
GTGAGCAAGCTGATTTGGGGGCGTGCCTGCTCCGGTTCCCTGAAGTCGCCGATCTGGACATTGCAACGGTCTCCAAAACA
GCAAGTCTGACTACTAGTTTTATTGCAGTATTATATCTATAAATCCAGGCTAAAATTATATATGTTGTGAACCATATGAA
GTCCAGCATTATTATGTCTATAAATCCAGACTAAAGTTATATATTGTGAACCAAATGAAGTCCAGCATTCTTTGTGTCCA
TTTTGTCATGTTATAAATACTCAGAACATAATGGTTGAGTAAATCAACTCGAAAGAACAAAGGTGCAGCGTTCCCTTGTC
TAAGATCTCACAAAATAATGTGCCAAATTCATCTAGCACGACGCCAATAGCTGCACCAGCCATGTCTAAGACCTTCTACA
CTATCACGCGCACACAGCAGAAGGTTAATCAGCAAAAGCATGACGAGCAACAGCAAAGATGTACGCTAA---GTTTAGGA
GTTTTTCCTT-TTGAACCGAGTTTAGGAGTTTGTTAAATGTTAACCGTTGCGCTAAGCGGTGACACCATGTTCAAAATCC
ATGTATCA-GGACTACTGCACATAC-TTTTAAGATAACAAAACATGATGTTCTATGGTACGGACTTGTGACACATCCACA
TTCTTTCGGACAGTCATATTATTACCGAATATGTCTAAGCCTAACCGGTTGTGCGCGCAACTCGAATCGTCTCCGTCGCT
GCGTCATGTGGATTCGCACGAGCGTGCCCCACCTGGTCCCACCCAACAATCCATAGCCTTATTTTCTCAGCGCTATATGC
GGCACGGCGGCAGGAATACAGGTCACATCGTATCTCTCTCGCTCGGCCGTTCCCCACCCCTCATTCCTTCTCTCTCTCGT
TCCCCATCCCGTGTCTGTCGAATCCGGCGCGCCGCCGGCTCCCTCCTCCCTTGCCATGGCCACGCATCGCCGGGTTGCTC
CTCCTCCGTGGCCCCCTCCCCTCTCCTGACATGTGACGTGCTTCTCACCGGTAGTCGATTGTCCTCCGCCCATGCCCTGC
TGCCTCTATCGCCAGATCCGCCATCGAGGTAAGATGGAGCAGCGTGGCTGCCTCATAGCCATGGTGGGGGATGATGAGAG
GATGTCGGGCATCGACGAACCACGAGCAGCAGCATCATCACTGTGAGCAGCTCGGTTGTGGCCAGATCTAGAGTCCAGCG
GCTCGGCGGCAAGGCCCAGTGAGGAGTCTAGAGCTCCTCCTCATCTTCCCCGTCGTCTTCCTTAAAGAGTCTAGGTAGCA
GTGATTCCTCTCCTTGTTTTTTCTTAAACAAGATTTTTATTCTTTTCCCAATCTTTTAAGATGCATGTGGTTTCGTATGT
GACAGTGGCTTCTATCCGATGTATTTTTCATCCAGCAAGTTTAGGAATATGGATTGATCTTATTTTATTTCCTCTCCTGC
AGTTTTCGGATAGAAGAATGCACTTGTTTTGTCCCTCTCCATACTCAAGAAATTTTTTATTGATCTGAATGTGTATCTTG
TAATCATTACCTGAACATTAATGGAAGAAACGAGGACCATTCATTAAGCATGTAATTTAATGGTCCATTAGCAATAGAAG
CCCTTCTGTCTCTCACGCAGATGTAGTTTAAAAATTAAATTGTACAGTTGGAACAAAGAAATTCCTTGTGCCAGTCTGGT
GTTGATTTGACGCTAGCTGTAGCTGCAATACGGGAGAGAGAATGTCACAAGAAAACTTATATACGCTAGAATACAGGAAA
TCTTTGTAGGACCTGCCTGCATGTTGATTTGACGTGCATGTTAGATGTGTGGAAGAGATATGCGTCGCACGCGCAATGCG
TTAGGAAAAATCCATGTCCATCAACCATGAAATAAGACATCAAGCCCTCAAACTTCCAAGTTTAGCACAAGTAACCACCG
ATCCTGTAAGAACTGGATGG--ATAGGGCAGAATCAGGATGAGGACAGTAGATATTCATGGCCATCAGTCGATTTGATCA
TTAACAAA
>chr3D_527
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-TAACGATGCGAGTATTCGCAAAACATGTTGTTGTTTTCAGTTGGAGGATAATGTTTTGACAAAGACAAAACCGGACCTG
TAGCTTCATCG---------GAAATACCCGCAGACAAAGACACCGGCAACAAGCAGATACACAAAGCTGCCCCCGACTCG
GCAGATATTTTTTTTTTTGCTGAAAAAAAGAAA--GAGGCTCGGCAGATATTCTGCTACGCGTCGTCCTCAAAATAGAGA
CACGCAGCGGGCGAAACGAGCGCGCCATCTGACGCCACGCTCGCCGCCGCG--GAATATCCAAAACCGAACTGGAGACGG
ACCCAACAAATACCCAAGTCAAATGAAATGACCCTTCTCTC----------CTCCGCCCCTCTCTCACGCAGTTCACACA
CTCCTCTCCCTCTCCTCCTCCTCTCCTCACCCCACCAAAACCTAAGCAAGAAGGGCCAGAGGAGCTCCGAATCCAGGCTC
GCATGGCCAACCTCCTGCACCTCCCGGACCTCGCGGCGGCCAGACCGCCCGCGCCCGGCGTCGCGCGGAGGAGGGGGGCG
AGGGTCGTGGCGGCGGC---GGCCGGGGGCCGCGTGAAGCAGGAGGAGGCCGGGGCGGGGACGGGGAGGGGGCGGGTGAT
CAGGGTCACGGACCCCGTGCGGGACGGGAGGCTGCCGGTGCCGGCCCCGCCGCCGCTCTTCTCCGTGCCGATGACGCCGG
CCTCGGAGTCGCCGGCGGCGACCACGCGCCGGGATGACGACGAGGAGGAACGGCGCAGGTACTACCTTAACCTGGGCTAC
GCCATCCGCACGCTCAGGGAGGAGATACCCGACGTCTTCTACAAGGAGCCCAGCTTCGATATCTACAGGTCCGTGCCCAT
GTTTCATTGCTTCTCCCTGTCTTCACTTTGAGATCCTTCCAGAAACCTTTATTTAAAAAAAATACAAAAACAAAGGATCA
ACTGTTAGGTGGAACCATGGTGAATTAGGGGTAGAATTTGTGAGTGCTTCTAATTGATTGATTAGCATCGCTATCTGTTT
GTGGCTACTTCATAATGGATTGGTCTGTGGCACACTGGCACCAGCTTCT--------AATTAGAACATGCTACATGCATA
TTTCGCTGCAGATATCTCTCTGGGTTAAGTAGTTGTGCCGACGCAGTAATTATTTGATTGCCATTGACCGATGTTGATGG
CTAGATTGCCTCACAATACCGCATCTCTTCTAACTTGAAATTATGATCTAGCTTAGTCTTTCAGTACTCTTCACACCTAT
CTAGTGTTGGGTGTTTTTCGAGTTGGGATGGATGACCTGGGCAGCGCAGCTACTATTGGGCTATCAAGCATCAGAAGAAC
CACATTTCAGAAACCATCTAATGAAGCTTAGGTTTTATCTCTATATAATGTTAATTAGGATATGGTTTGTCTTGTGGATG
TGAGTAGGACCTCTT-ACTTGTAGAGCTACCCAATGCATTCCTCAAGAGATTCAGAGATTCATGTTCGAGGCAGTAGCAT
CAGCCTTCTAGTGTTGATTCTGAGTGCACATTGGTACAATGAACTGAAATGTGGACTGGAGAGCAGAGTATATGTGCAAT
AGGTTTGACCCAGTGGTGTGAGGCTCTTGTACTAGATTCGTAATGTAATGGCATCTATCTTTTCTTCTTTCTTATGCACA
TGGTTAG-C-TCCACATTTTATCTGTTTCTTTTTTCTTCTGTTGCAGAGTTTTGTTTTGTTTCTTTATCGGGAACTAGTA
AGTTAATTAGTGTAATAGAGACACATCCTAGCTTGTGAAAGAACCAGTGGTGCATGGTGAGGGAGGAAGAGATGACCAGG
CTGATCAAGTTTTAAAGTAGATTCTTTCTTGTTTGCACCGGTCATCATCGATCTATGGTGATAGCTTAGCGCTGTAGTTG
CCCTTTTGGCCATTTTCTTTGTTTTGCTCTGCATTTTATAGAA----------------------------TGTTACTTG
TTGGG--AGCTTTTATCCTCGGAACACAAAGACAGTCAGTTCTCCTGCTTGTTCTCCTTAAAAATGCAATCTAATTCTGG
TTAGTATGTGTTTTCTGGTTTGGTTGGGATGTAATGATGTCTCTTTCTTGTTAGCATACTGTGGCCATCTTGTTTAATAA
TTATCAATTAATGCAAGCAATATGACATTTGCTTGAGCTTATCTTATCCATTTAGCGTGTTGTCTAATCTACGATGCAGA
CTGGGAGTGGGACCACACATTTATAAACACGACCCAACATCAGTTGCTTACATAAGTGTTTCTTGCATTAACCTTATCAG
TATGTCAGTTGTCCATTAGAGTTTATATTTTATTATTGCGATCATGAGGTTATCCCCTGCAATAGTGCAAAAGAGCCGTT
GCTAAGAGTATCTTTTGTATGTGGGACTCGGGTGTAAAGATTAGAAGGGGTGAGGCTAGCTAAATTATTTGAGGAACCGG
TTCTAGTTTGAGGATCGAGTCTAAGCAAATAAAAGAATTGAATGGGCGCAATGTCAGTTTGCAAACTCAC--GAGATAAA
TATGCTAGTGCTCAGAAAAACGTAGAGCTGATCGTCTTTCTGCTAGCTAGTGGGTCCTACAGCCAGGTCTAAGACATTGT
AGCAAATTTTGCTCTGCTAGACTCTCTATGGGTGGCAGACTTCATCTCAACAAAATTCTCAGCACATTGCCCATGCCCTA
ACCATTTAAATTACACCCAAATCATACAGTACTTTTCTTGCGTCTTTAAGCTGCCTTCGAACG-------TTCACTGAGC
TTAGTGGCTGTTTGGTTTGAGACTAAGTTTGCCTAAGGTTGCCACGCACAACGTTAAGCAAGTTTGACCAACTTAGTTGG
GCGTTTGGTTCCAGCCACATCTTAGGA----------TTGCCACACCAGGGCCCCAATCACATCCACTCACAAAGTGTGG
CAAGATTCCCTTAGGCTTGCCAACTTGTGGCTCCAACTTTATTGAACTAACCTTAGGCTAGTTTGGCAAAAACTTGTAGC
AGAGTGTGGCATTGCTAGGCCTAGAACCAAATTAGCCCCTAAGAGAAACAGAAAAATACAATATTTTGTATCTGAATTAC
GAGGTTACTATTAGACCTGCTTGTTTAATTGCTCGATCTTGTCTCTGTTCGAACTTTAGCATGTATATCTAATGCTTTGC
AGTTGCTCCCATGAGTTGAGTAACTTGAGCCTGCATCTGTCTTCCATTCTAATTAACTTATTATGTAATGCAGAGTACAT
TGCACGAAGGTTGCATTTTCTTGTACAGATTTGTACTGTTGAGTCTTATCATTGGTCTTTTCCTAATTCTGTTTGTTGCT
ATTTGCCAGAGATGATATCGTCTTCAGAAACCCTTTCAATAAATTCGAGGGCATTGACAATTACAGAAGTCTATTCTGGG
GATTGCGCTTTACTGGACGTATCTTCTTTAAAGCATTATGGGTTGATATAGTTAGTATATGGCAGCCTGCCGAGAATCTT
ATTATGATTCGCTGGATTGCCCACGGCATTCCTAGAGTCCCATGGGATGGCCATGCCCGCTTTGATGGTGCCTCCGTTTA
CAAACTCGACAGGAATGGGAAGATCTATGAGCATAAGGTACATAACATTGCTACGACCCCACCGACAAAGTACAAGGTCC
TGTCTGTACAAGAGCTAGTCAGATCACTTAGCTGTCCGTCCACTCCAAAACCAACGTATTTCGAGGCTTCATCTCAATCT
TTGAGCACGGCGTCGCTTTATTCGAGGTTGGCATGGATCAGACGCCTAGCAAATCTCAGAGGAGGATAGGGTGGGTCTTA
GCACGATACTTACAAAATCTACCTTTTTGTTGTATTGTAGTTACCAGTCACTGATGAGTAGTACTGAATCATAACTGTTG
TATATATGTACAGAGACAAATTTATACAGAATAAAGTTGCTCTTGGTTGAGCT---------------------------
-----------AATTTGGGGGTGTGCCTGCTCCGGTTC-CTGAAGTCGCCGATCTGGACATTGCAACGGTCTCCAAAACC
GCGAGTCTGACTACTAATACTATTGCAGTATTATATCTATAAGTCCAGACTAAAATTATA--TATTGTGAACAATATGAA
GTCCAGCATTATTATAC-------------CTAAAATTATATATTGTGAACCACATGAAGTCCAGAATTCTTTGTGTCTA
TTTTGTCATGTTGTAAATACTCAGAACAGAATGGTTGAGTAAATCAACTGGAAAGAACAAAGGTGCAACGTTCCCTTGTC
TAAGATCTCACAAAATCATGCGCCAAATTCGTCTAGCACGACGCCAATAGCTGCACCAGCCATGTCTAAGACCTTCTAGA
CTATCACGCGCACACAGCAGAAGGTTAATCAGTAAAAGCATGACGAGCAGCAGCAAAGATGTACGCCAA---GTTT----
------------------------AGGAGTTTGTTAAATGTTAACCGTTGTGCTAAGCGGTGACACCATGTTCCAAATCC
ATGTATCA-GGACTACTGCACATACTTTATAAGATAACAAAACATGATGTTTTATGGTATGGACTTGTGACACATCCACA
TTCTTTCGGACAGTCATATTATTAC-------ACAAGTTCAGTTTCTA--------------------------------
--------------------------------------------------------------------------------
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-----------------CCTTCAACCATGACATAAGACATCAAGCCCTCAAACATCCAAGTTTGGCACAAATAACCACCA
ATCCTGTAAGAATTGGATGG--ATAGGGCAGAATCAGGATGAGGACAGTAAACATTCATGGCCATCAGTCGATTTGATCA
TTAACAAA
>SNPs
S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------------------------------
---------------------------S-----------------SS--------------------SS---------S-
--------------S-----------------------S---------------S--------------------S----
-S---------S---------S-S-----------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S---S--
---------S---SS-----------S------------------S--------------------------------S-
-------------------------SS--SSS-----------------------------S-----SSSSSSSSSSSSS
S------S-S----------------------------------------------------------S--------S--
----------------S------------S-S-----------------------------------------S------
----------SSS-----SS-S--S-----SSSSS---------------------------------------------
--------SS--S----------------------------------S-SSSS---------------------------
---S----------------------------------------------------------------------------
----------------------------------------------------S-------------------S-S-----
-S-----------------------------------------------S---S----------------S----S----
--------------S---------------------------------S-------------------------------
----------------------S----------------------S--S-------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------S-----------------
----------------S----------------S------------------S-SSS-----------------------
---------------------S-----S---SS---S---S---------------------------------------
-------------------------------------------------SSSSSSSS-----------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------S----------------------------------------------------S-
SS------------------------------------------------------------------------------
---------S----S------------------------S----S--S----------------------S---------
S--------S------------------S----S----------------------------------------------
----------------------S------S----S-----------------------S---------------------
-----------S--------------------------------------------------------------------
-----------------------------------------------------S--------------------------
-----SS--------------------SS---------------------------------------------------
-----S--------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S----------------------------S---------------
---------------------------------------------S--------------------------S-------
----------------------------------SS----------S---------------------------------
---------------------------------------------S-----------------------S----------
--------------------------------------------------------S-----------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---S---------------------------------------------------------------------
----------------------------------------S------S--------------------------------
---------------------------------------S----------------------------------------
-------------S------------------------------------------------------------------
--------S------------------S------------------------S---------------------------
-----------------------------------------------S------------S-------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------------------------------------------S----
------------------------------------------S-------------S-----------------------
-------S------------------------------------------------------------------------
--------------S--------S---------------------S----------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
----S-S----S----------------------------------SS-SSS-------------------S--------
---------------------S---------------S---------------SS-S-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------SSS---------------------------------S------------------SSS--------
-----SSS--S----------------------------S------S---------------SS----------------
--------S------S---S--------------------------S--------------------S------------
-------S-----------------SSSS--S------------------------------------------------
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-----S----S---------SS------------------------------------------S----S----------
-S------
>forward_106
--------------------------------------------------------------------------------
------GGGGGCATGTCGTATGTGAT------------------------------------------------------
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>reverse_2188
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---------------------------AGGGGTGAAATTGGTGTGGC---------------------------------
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>forward_1675
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-------------------------------------------------------CCAGAGGAGCTCCGAATTCG-----
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>reverse_3646
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---------------------------------------------GGGGGTGAGGCTAGCTAAAT---------------
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>forward_2719
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-----------------------------------------------------------TCATGTTCGAGGCAGTAGCG-
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>reverse_4428
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---------------------------GGCCTGCATCTGTCTTCCAT---------------------------------
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>forward_2721
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-------------------------------------------------------------ATGTTCGAGGCAGTAGCGT
T-------------------------------------------------------------------------------
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>reverse_4528
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-----------------------------------------------GTCATTGGTCTTTCCCTAATTCTGT--------
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>forward_2722
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--------------------------------------------------------------TGTTCGAGGCAGTAGCGT
TG------------------------------------------------------------------------------
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>reverse_4541
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------------------------------------------------------------CCCTAATTCTGTTTGTTGCT
ATTTGC--------------------------------------------------------------------------
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>forward_3830
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---------------------------------------------------GGGTCCTACAGCCAGGTCA----------
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>reverse_5253
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----------------------------------------------------CCTGGACATTGCAACGGTCT--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------
