>input_sequence_21759
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---------------------------------------------------------------------------ATGGA
TCGCCGAGCCTTCAGGAGTAACTCGTGCAACAGCAAGAACACGGCGCCTCCCCCCTCGCCCT---CGGCGGCGTCGGCGG
CGGTGTACCGGACGTCCTCGGCGCCGGTGGGGGGCTCCAAGGACAACGTCGGCGAGCGCAAGGCGCTGCTGCCCCGGCGC
CCCGAGGGCGGCACGGCCCGCAAGGCCTACAAGGGCCCCAAGCGGCGGGTGCAGTGGAAGGACACCCACGGGAAGAAGCT
CGCCGAGGTCTTGGAATTCCAGCCTAGGTAAGCAAACCAAGCAACCTCCGTGCATCATTTCAATATTAATTTTTGTGCTG
CCGTAAATGTGCTAGATAGACGCACCATGCTTCTTTTGATCCTACACTACATGATGCCGATGCCG------ATGAGTTCC
ATGCGATGTTTCCTTGTTTGGCTACCCAAATTAGCTGCATAGG-GGTTGCTTGGATAGTTGGAACTCTTAGGTGGGCGTC
TCTTGTCAAGCAGGAAAGAGGGAAATGATTGCTGTAGTCACGAGGTTCGGTGATCAAATGATGTGTATCCTGCCAGGATA
CCACTTTAGAACATGTGATC--------CATTTGGGGTGTCACAATCTGCCAATGTCAGCTAGCTAGGCGAACTGAATTA
TTGTGCCTGGGGGCTTTTCAACATCCAATTCAAGTAACTGGGGTCTATGCTTCCCTTGAACTCTTCTGAAGTAACATGTG
GCTATAATTTCAGTCTTAGTTTGTCGTTTACCTGACCTATAAATTCACCCCGAGTCCGCTGTGAACTGATTAGACAGAAA
CATGTTCTACTTGTGGTGCCGTAAAAGTTAAGTACGAACTGGTGTTGCAAAATGATTGCATAAAGTCTTAGGCAACTAAT
CCATAATCGTGCTGGTGCGCAATTATGAACCATTTGTTGGAGTAGTGATTGGTCATTATTGATGTATCAAGGACTGGAAA
TGAAACAGCCCTTCAAAGTGGAAAAGGATGAGAATTTATGATGAGGCTGCTGCATTTCTTGGCCTCAGTGGCAGTATTAT
GTCTCCATTAGCCTATAAGAAAAACTGTGTATTGGTCTACTATTACTTTTGATACGCTCTTCTTACAGGCATGCAAATGA
TATGTGCTGTCATATGTGAAGCTGGTTTGTATATGTTCCTCAGTTGATACTGTAGATTTTGTCAATATAATTCAATCTGT
ATGCTAGTTCCTTATTTTTTTAACTTTAGTTCCTGATTTCTAGTCAAGCCATGATCAGTAGAGTTTTGGCGATTTTATTT
TCTGAGAGTAGACTTTGGCGATTTGATTAAACAAATTGTTGAAATTTTGATCAGTATCAGTAGACTTTTGGCAATTTTAT
TGAAAATTTAGACGAGTTGAACCTCGTCATTTATCAAAATGTATTTATTAATTATGCATGTTGGGGTGGGGCTGCACATG
TTAATGCTAATTAGCAGTAGATTATTGAACATCTGATTCCTCAAATTTTCAACTAATAAATTTAGATCCGAATGTAATTA
TTAATGTTGATTATTATGATTTATCTTCAGTAAATTGGGCAATTATACATTATACTGTTATGAGCTAAAGTGGTAACCTA
TCCCGTTCAGAAGCCACTCTTCCACGTCAGGGGTTATCCCTGTCACTGTTTTCTAGTGCCCCATCATTGGTCTTCGGACC
TTTACCCTACCCATAACGGAGACTTCGTTAAAAACCTAGAATTGATGACACATATACCTAACAAGGAAACAGT--TTAAA
GTGGCAATACAGTATTGGTTTATTTATTTCCTTTCATAACAGCTGTAGTTATGTAACTTGTTCTAAGGCCTCCTGCATTG
GAACAGGAAATGTTTAACTTATCCGTAACATTTCTGGATGCAAAATTCGGTTACGCTGCAAGCAAGTTTAGTAATATAGC
AGTCTAATTGTCGGATTGAGGTAATATGTGATGTCTGGCGGTTCAGGACTGAGGACTTGGACCACCTGCATATGAATTGA
GGACAGTCCACCTGAAAATGCCCT----GTTTCCGCCTACACAAGACCATTCCATTAGTCCAAATTAATCTGCATCGGAA
CATTTATTTATTTTAACAACCATGAAATTACACAACTGTAATCTGATCTCAGTTGAACAAGCTTAGGTAAGCTCTGTTAC
TTTGATATGGATATTTGGAAACCCTTGTTTATGTTCTTCACAGTTACAGTTTGATTAGTCCGTGGTGG------TACCC-
--TACCCTACATCTTTGTTCGGTGTAAGTTCAGTTTAACCAAGTGGAACTTGTTGGCACATGACTTCTTTTGTTCTC--A
AGATATTTGCTTCGCCTTTTTTTTCCATACGACCCCCAACAAGGGACAGGGTTCTCATTTGTCACACTGTGTAGCAATTG
CTTACAGTTCCAAATTGCTTATTTTTACACGAGCAGTACCTTTTATAGGCTTTGGAGTTGCAGAGGCGTAATGAATACTT
TGTTTTATCAGTCTGTAAGTTACAGTGGACCTTAATCTTTACCGCTGAAGTATACTTCTGTAAGAACTTTAATTACCTCA
AGTTGTCTTTCTTTGTACTGGCATCAGCTTTACAATAGAACCCACATAAGGTGCGATGATATGTGTTAATTGAAAATGTT
GTTCTCTTTTGGGATGCTAGATGGTATTAAAAGATTTTGAAATAGACCAGATTACAATGCATTAATATAGCCCATGCATC
TAAAGAGGTTGTAT-------CTAGAAATCTTGAGTTACAGTTTCATGGGGCCAGTATAATGACAGCAGTATTAGTGTAT
TACACATTA----TCACAGTGAAACTTGTTGGCATATGATTT--------------------------------------
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--------------------------------TCTCTCTCTCTCAGTATATTTACTTCGCCTGATTGCAGTTGCATATTT
GTTGCACCCTTTAGTCCTCGGAGATCAGTTTACAGTTCCAAATTTTGCTTATTTAAAAAAATGAGCAGTACCTTTATAGG
TTTTAGAAATTGCAGGTGTGTAGTAAATAATTTCTTTTATCAGTATTTCTCTCTGCTGGCATCAGCTGACAGTAGAATCC
ACATTGGGTGCAATGGTATGTGCTC----AAAATGATCTCTTTTGGAATCGTAGTATCTTGGCCGAGATACAATACGTTA
ATAACCCCATGCATCTAGAGAGGTCGTATC---------CGCGTTGAACTGTAATTATGTTGGTTGCTCAAGAAATTCCA
TGCACCCATCACAG---AAAAAAAGTCGATGCTGACATTTGCTTGTCTT---GATTTTCTTCCTCTAATTGCTCTGCCAT
-----CTTTTTTG----------CAGTGATTCAAGTGACTCGGATGATGATTATTTGGATACTTGCATATGCTCAGTCAT
GTAA----------------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G334300
CGATGTACTCCCTCCGTTCCAGCGATGTACTCCCGCCTAGCACTCGTCATTGGATGGCGTGTGGAGGTTGTCTCCGGTGA
ATCTCACGGGATTCGATTGGCGTCTTGGATCCTGTTTTCGCTGGTCTGCATTCGTGTGTCTTCATCTACATTTTTCACGT
GAGCATTGTGTTCAAACCATGTTTAAAAAATCAAATCAATATCCATTTTTATAACCAAACAAAC--AATATCCTAGTGTC
ATTCAC--ATCAGGATCATACAAAGAAGGAAAGTTGACAATGAGGATATGATTGCCACCCTGGTTATCTTGATTCAAACA
TGTTGCTCCCTCGTGGGAGTAATTTTTTACAAATG----AAAGTTGGATACACGTACAAGAATATCCCCATCATCAGTAA
-AAATAAAAATTCAGTTATAAATAAACAGGAAGTAAAG---GAGATCGTAACAAGGAACGGAAGAGACAGGGGAGGGAGG
TCCGGTCC----GGTCCGGTGGTTATTTGGCTGGGGGAGCCAGCCAAGGAGAGCCAAGGACGCGCGGGATCGGGTCTGCC
GTCACCACCACCGCCTCCGCCCGCCTGCGTCGCTCTCCGGCCCCGTGCCGTCCC------------CCACCCCCACCATT
CCTCCTCTCCTCTCCGGCCCCTCCAATCCAATCCCGCCGAATCCACTCCTCCTCCTCCTCGTCCCCCTCCCGCGGCCTCG
CCTCGATCCGGAAGGAATCTCCGGCCGGCCTCCCTCCCTCCAATTCCGCGCCCAACTCCCCAGGTCCGTTTGCTCTTCTT
GCCGTCCGCAGATTCG----GTTCCTCTGCTCGTTTCCGCCTCCGAGATTCACCGATTCCCGTCCA---TTCCGTCTTTG
TCTATCAGCTTGGGGCCATTTTGGAATCGTCCTCCCTCGAGGCGTCTGTCTCGGCCCCAAAGATCCAATTCGGTTGGATT
TCTGCTCCCGAGCCGGAGCCCGTCCGGAGGCGCACGACCTGAGACCGGCGCGGAGGGAGTTGATGCCACCCGGCGATGGA
TCGCCGAGCCTTCAGGAGTAACTCGTGCAACAGCAAGAACACGGCGCCTCCCCCCTCGCCCT---CGGCGGCGTCGGCGG
CGGTGTACCGGACGTCCTCGGCGCCGGTGGGGGGCTCCAAGGACAACGTCGGCGAGCGCAAGGCGCTGCTGCCCCGGCGC
CCCGAGGGCGGCACGGCCCGCAAGGCCTACAAGGGCCCCAAGCGGCGGGTGCAGTGGAAGGACACCCACGGGAAGAAGCT
CGCCGAGGTCTTGGAATTCCAGCCTAGGTAAGCAAACCAAGCAACCTCCGTGCATCATTTCAATATTAATTTTTGTGCTG
CCGTAAATGTGCTAGATAGACGCACCATGCTTCTTTTGATCCTACACTACATGATGCCGATGCCG------ATGAGTTCC
ATGCGATGTTTCCTTGTTTGGCTACCCAAATTAGCTGCATAGG-GGTTGCTTGGATAGTTGGAACTCTTAGGTGGGCGTC
TCTTGTCAAGCAGGAAAGAGGGAAATGATTGCTGTAGTCACGAGGTTCGGTGATCAAATGATGTGTATCCTGCCAGGATA
CCACTTTAGAACATGTGATC--------CATTTGGGGTGTCACAATCTGCCAATGTCAGCTAGCTAGGCGAACTGAATTA
TTGTGCCTGGGGGCTTTTCAACATCCAATTCAAGTAACTGGGGTCTATGCTTCCCTTGAACTCTTCTGAAGTAACATGTG
GCTATAATTTCAGTCTTAGTTTGTCGTTTACCTGACCTATAAATTCACCCCGAGTCCGCTGTGAACTGATTAGACAGAAA
CATGTTCTACTTGTGGTGCCGTAAAAGTTAAGTACGAACTGGTGTTGCAAAATGATTGCATAAAGTCTTAGGCAACTAAT
CCATAATCGTGCTGGTGCGCAATTATGAACCATTTGTTGGAGTAGTGATTGGTCATTATTGATGTATCAAGGACTGGAAA
TGAAACAGCCCTTCAAAGTGGAAAAGGATGAGAATTTATGATGAGGCTGCTGCATTTCTTGGCCTCAGTGGCAGTATTAT
GTCTCCATTAGCCTATAAGAAAAACTGTGTATTGGTCTACTATTACTTTTGATACGCTCTTCTTACAGGCATGCAAATGA
TATGTGCTGTCATATGTGAAGCTGGTTTGTATATGTTCCTCAGTTGATACTGTAGATTTTGTCAATATAATTCAATCTGT
ATGCTAGTTCCTTATTTTTTTAACTTTAGTTCCTGATTTCTAGTCAAGCCATGATCAGTAGAGTTTTGGCGATTTTATTT
TCTGAGAGTAGACTTTGGCGATTTGATTAAACAAATTGTTGAAATTTTGATCAGTATCAGTAGACTTTTGGCAATTTTAT
TGAAAATTTAGACGAGTTGAACCTCGTCATTTATCAAAATGTATTTATTAATTATGCATGTTGGGGTGGGGCTGCACATG
TTAATGCTAATTAGCAGTAGATTATTGAACATCTGATTCCTCAAATTTTCAACTAATAAATTTAGATCCGAATGTAATTA
TTAATGTTGATTATTATGATTTATCTTCAGTAAATTGGGCAATTATACATTATACTGTTATGAGCTAAAGTGGTAACCTA
TCCCGTTCAGAAGCCACTCTTCCACGTCAGGGGTTATCCCTGTCACTGTTTTCTAGTGCCCCATCATTGGTCTTCGGACC
TTTACCCTACCCATAACGGAGACTTCGTTAAAAACCTAGAATTGATGACACATATACCTAACAAGGAAACAGT--TTAAA
GTGGCAATACAGTATTGGTTTATTTATTTCCTTTCATAACAGCTGTAGTTATGTAACTTGTTCTAAGGCCTCCTGCATTG
GAACAGGAAATGTTTAACTTATCCGTAACATTTCTGGATGCAAAATTCGGTTACGCTGCAAGCAAGTTTAGTAATATAGC
AGTCTAATTGTCGGATTGAGGTAATATGTGATGTCTGGCGGTTCAGGACTGAGGACTTGGACCACCTGCATATGAATTGA
GGACAGTCCACCTGAAAATGCCCT----GTTTCCGCCTACACAAGACCATTCCATTAGTCCAAATTAATCTGCATCGGAA
CATTTATTTATTTTAACAACCATGAAATTACACAACTGTAATCTGATCTCAGTTGAACAAGCTTAGGTAAGCTCTGTTAC
TTTGATATGGATATTTGGAAACCCTTGTTTATGTTCTTCACAGTTACAGTTTGATTAGTCCGTGGTGG------TACCC-
--TACCCTACATCTTTGTTCGGTGTAAGTTCAGTTTAACCAAGTGGAACTTGTTGGCACATGACTTCTTTTGTTCTC--A
AGATATTTGCTTCGCCTTTTTTTTCCATACGACCCCCAACAAGGGACAGGGTTCTCATTTGTCACACTGTGTAGCAATTG
CTTACAGTTCCAAATTGCTTATTTTTACACGAGCAGTACCTTTTATAGGCTTTGGAGTTGCAGAGGCGTAATGAATACTT
TGTTTTATCAGTCTGTAAGTTACAGTGGACCTTAATCTTTACCGCTGAAGTATACTTCTGTAAGAACTTTAATTACCTCA
AGTTGTCTTTCTTTGTACTGGCATCAGCTTTACAATAGAACCCACATAAGGTGCGATGATATGTGTTAATTGAAAATGTT
GTTCTCTTTTGGGATGCTAGATGGTATTAAAAGATTTTGAAATAGACCAGATTACAATGCATTAATATAGCCCATGCATC
TAAAGAGGTTGTAT-------CTAGAAATCTTGAGTTACAGTTTCATGGGGCCAGTATAATGACAGCAGTATTAGTGTAT
TACACATTA----TCACAGTGAAACTTGTTGGCATATGATTT--------------------------------------
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--------------------------------TCTCTCTCTCTCAGTATATTTACTTCGCCTGATTGCAGTTGCATATTT
GTTGCACCCTTTAGTCCTCGGAGATCAGTTTACAGTTCCAAATTTTGCTTATTTAAAAAAATGAGCAGTACCTTTATAGG
TTTTAGAAATTGCAGGTGTGTAGTAAATAATTTCTTTTATCAGTATTTCTCTCTGCTGGCATCAGCTGACAGTAGAATCC
ACATTGGGTGCAATGGTATGTGCTC----AAAATGATCTCTTTTGGAATCGTAGTATCTTGGCCGAGATACAATACGTTA
ATAACCCCATGCATCTAGAGAGGTCGTATC---------CGCGTTGAACTGTAATTATGTTGGTTGCTCAAGAAATTCCA
TGCACCCATCACAG---AAAAAAAGTCGATGCTGACATTTGCTTGTCTT---GATTTTCTTCCTCTAATTGCTCTGCCAT
-----CTTTTTTG----------CAGTGATTCAAGTGACTCGGATGATGATTATTTGGATACTTGCATATGCTCAGTCAT
GTAAATACCGCAGGGCTGAATCTCCGGTGCATCTTGCGCAGGTGGAGAGTACGAGTGTTTAGCAAGAGCTGTATCTTAAT
GTTATGCATTGGCCTAACAGTCTTGTATAG-AAAAAGGTTCACTCCAACAGGCTCAAACTATCTCATGTAGAGCAAGTCA
GGGCTGCGACCTAGCAAGGACTGGCGACGACGAGCCCATATCATCTGTTGAATGCGCAAGCAGCAGGAAGTTGCGTCAGA
ATTTTGAGATATCGCCACGCAGCAGTTAGAAAGGAAAAAAAAAAGGACACGCGGTGTTCTCAGCAGCAGCCTTGCTCTCT
TCCTGACGAGTAACGTTATGTGTCATAAGCAAAATGCTCTTAGAA-TCAGACACCGACATGTCTTGCGCGGCTGGAATTG
CGACCGATTTTTTGTCAATAGTAGTGTCTGCCTCTTGGCATGTTAACTAACTAGCTGATGTTCCTGTCTGTCTGTCA--G
TCTGATGCTGTCATCACACGCTTAACATTATTCTTGCATGACTTGATGTGTG------ATGGATGCTGTAATTCCAAAGT
GCAAGGTTTGTCACATTCCTGTGCCCTGTTGGGCAGTTCACTGTCATCAAAAGGGGCCTCTCTTTTTTATTTCT---GCA
GAAGATGAACTTCTCATCAAAGCTCCAGTAATTTACCGCCTTGTTCACCTCAAAAGAAAAAAAAACACCACCTTGTATGT
TGTCATACATTTTTTTACACCTTTTATTTTAAACATCATGTGTATTGATTTTCTTCTTGTAAATAGTTACTTCCTGACAT
GTGATACAAGAAAGCTAAATTCTGTACCCGCAAAAAATAAAGCTAAATTCTACACAGAAAAAGGTTTATTTTAGGCCAAA
AAAAGGGTAAAACAAGTTTGAGGGAAAAAAAGAGAGAGGCAAATTTATGCCACAGGCCTGCATGGAACGCGATGCAATTC
CCGCCACGCAACACACACACACACACAGGATTCCGACGGCCCGGCCCGGCCCGCGGC
>chr4B_46
---------------------------------------------GTCATTGGACGACATGTGGAGGTTGTCTCCGGTGG
ATCTCATGGAATTTAATTGGTGTCTTGGATTGTGTCTTTGTTGGTCTGCATTTGTGTGTCTCCATCTACTTTTTTAT-GT
GAGCGTTGCGTTTATACCGTGTTTAAAAAATCAGC-----ATCCTTTTTTATAAGAAAATAATAATAATATCCTAGTGTC
ATTCATATATCAGGATCATATAAAGAAGGGAAGTTGACAATGATGATATGATTGCCACCCTGGTGATCTTGATTCAAACA
TGTTGCTCCCTCGTGGGAGTAATTTTTTATACAAGTAATAAAGTTGGATACACGTACAAGAATATCCCCATCATCAGCAA
TAAAAAGAAAACCAGTTATAAATAAACAGGAACTAATAAACGAGATGGTAACAAAGAAGGGAAGAGACAGGGGAGGGAGG
GAGGTCCGGTCGGGTCCGGTGGTTATTTGGCTGGGGGAGCCAGCCAAGGAGAGCCAAGGACGCGCAGGATCGGGTCTGCC
GTCACCACCACCGGCTCCGCCCGCCTGCGTCGCTCTCCGGCCCCGTGCCGTCCCCCGCCCCCACCCCCACCACCACCATT
CCTCCT-----CTCCGGCCCCTCCAATCCAATCCCGCCGAATCCACTCCTCCTCCTCGTCGTCCCCCTCCCGCGGCCTCG
CCTCGATCCGGAAGGAAGGAAGGAAT-------CTCCCTCCAATTCCGCGCCCAACTCCCCAGGTCCGTTCGCTCTTCTT
GCCGTCCGCAGATTCGTTCGGTTCCTCTGCTCGTTTCCGCCCCCGAGATTCACCGATTCCCGTCTCCCTTTCCGTCTTCG
TTTATCAGCTTGGGGGCATTTCGGAATCCTCCTCCTTCGAGGCGTCTGTCTCGGCCCCAAAGATCCAATTTGGTTGGATT
TCTGCTCCCGAGCCGGAGCCCGGCCGGAGGCGCACGACCTTCA------------GGAGTTGATGCCACCCGGCGATGGA
TCGCCGAGCCTTCAGGAGTAACTCGTGCAACAGCAAGAACCCGGCGCCTCCCTCCTCGCCCTCGGCGGCGGCGTCGGCGG
CGGTGTACCGGACGTCCTCGGCGCCGGTGGGGGGCTCCAAGGACAACGTCGGCGAGCGCAAGGCGCTGCTGCCCCGGCGC
CCCGAGGGCGGCACGGCCCGCAAGGCCTACAAGGGGCCCAAGCGGCGGGTGCAGTGGAAGGACACCCACGGGAAGAAGCT
CGCCGAGGTCTTGGAATTCCAGCCTAGGTAAGCAAACCAAGCAACCTCCGTGCATCATTTCAATGTTAATTTTTGTGCTG
CCGTAAATGTGCTAGATAGACGCACCATGCTTCTTTTGATCCTGCACTACATGATGCCGATGCCGATGC-----------
---CGATGTTTCCTTGTTTGGCTACCCAAATTAGCTGCATAGGGGGTTGCTTGGATAGTTGGAACTCTTAGGTGGGCGTC
TCTTGTCAAGCAGGAAAGGGGGAAACGATTGCTCTAGTCACGAGGTTCGGTGATCAAATGATATGTGTCCTGCCAGGATA
CCACTTTAGAACATGTGATCATGTGATCCATTTGGGGTGTTACAATCTGCCAATTTCAGCTAGCTAGGTGAACTGAATTA
TTGTGCCTGGGGGCTTTTCAACATCCAATTCAAGTAACTGGGGTCTATGCTTCCCTTGAACTCTTCCGAAGTAACATGTG
GCTATAATTTCAGTTCTAGTTTGTCGTTTACCTAACCTATAAATTCACCCCGAGTCCGCTGTGAACTGATTAGACAGAAA
CATGTTCTACTTGTGGTGCCGTAAAAGTTAAGTACGAACCGGTGTTGCAAAATGATCGCATAAAGTCTTAGGCAACTAAT
CCATAATCGTGCTGGTGCGCAATTATGGACCATTTGTTGGAGTAGAGATTGGTCATTATTGATGTATCAAGGACTGGAAA
TGAAACAGCCCTTCAAAGTGGAAAAGGATGAGAATTTATGATGAGGCTGCTTCATTTCTTGGCCTCAGTGGCAGTATTAT
GTCTCCATTAGCCTATAAGAAAAACTGTGTATTGGTCTACTATTACTTTTGGTACGCTCTTCTTATAGGGATACAAATGA
TATGTGCTGTCATATGTGAAGGTGGTTTGTATATGTTTCTCAGTTGATACTGTAACTTTTGGCAATATAATTCAATCTGT
ATGCTAGTTCCTTATTTTTTTAACTTTAGTTCCTGATTTCTAGTCAAGCCATGATCAGTAGACTTTTGGCGATTTTATTT
TCTGAGAGTAGACTTTGGCGATTTGATTAAACAAATTGTTGAAATTTTGATCAGTATCAGTAGACTTTTGGAAATTTTAT
TGAAAATTTAGACGAGTTAAACCTCGTCATTTATCAAAATTTATTTATTAGTTATGCATGTTGGGGTGGGGCTGCACATG
TTAATGCTAATTAGCAGTAGATTATTGAACATCTGATTCCTCAAATTTTCAACTAATAAATGTAGATCCAAATGTAATTA
TTAATGTTGATTATTATGATTTATCTTCAGTAAATTGGGCAATTATACATTATACTGTTATGAGCTAAAGTGGAAACCTA
TCCCGTTCAGAAGCCACTCTTCCACGTCAGGGGTTATCCCTGTCACTGTTTTCTAGTGCCCCATCCTTGCTCTTCGGACC
TTTACCCTACCCATGACGTAGACTTCGTTAAAAACCTAGCATTGATGACACATATACGTAACAAGGAAACAGTAATTAAA
GTGGCAATACAGTAT-GGTTTATTTATTTCATTTCATAACAGCTGTAGTTATGTAACTTGTTCTAAGGCCTCCTGCATTG
GAACAGGAAATGTTGAACTTATCCGTAACATTTCTGGATGCAAAATTCAGTTACGCTGCAAGCAAGTTTAGTAATATGGT
AGTCTAATTGTCGGATTGAGGTAATATGTGATATCTGGCGGTTCAGGACTGAGGACTTGAACCACCC-CATATGAATTGA
AGACAGTTCACCTGAAAATGCCCT----GTTTCCGCCTACACAAGACCATTACATTAGTCCAAATTAATCTGCATCGGAA
CATTCATTTATTTTAACAACCATGAAATTACACAACTGTAATCTGATCTTAGTTGAACAAGCTTAGGTAAGCTCTGTTAC
TTTCATATTGATATTAGGAAACCCTTGTTTATGTTCTTCACAGTTGCAGTTTGATTAGTCCCGTGATGGTACCCTACCC-
--TACCCTACATCTTTGTTCGGTGTAAGTTCAGTTTAACCAAGTGAAACTTGTTGGCACATGACTTCTTTTGTTC-----
-------------ACC-TTTTTTTCCATACGACCCCCAACCAGGGACAGGGTTCTCATTTGTCGCACTGTGTAGCAATTG
CTTACAGTTCCAAATTGCTTATTTTTACACGAGCAGTACCTTTTATAGGATTTGGAGTTGCAGAGGCGTAATGAATAGTT
TGTTTTATCAGTCTGTAAGTTACAGTGGACCTTAATCTTTACTGCTGAAGTATACTTCTGTAAGAACTTCAATTACCTCA
GGTTGTCTTTCTTTGTACTGGCATCAGCTTTACAATAGAACTGACATGAGGTGCGATGATATGTGTTAATTGAAAATGTT
GTTCTCTTTTGGGATGCTAGATGTTTTTAAAATATTTTGAAATAGACCTAATACAATACATAGC------CCCATGCATC
TAATGAGGTTGTATTTAGATTCTAGAAATCTCGAGTCACAGTTTCATGGGGCCAGTATAATCAGAGCAGTATTAGTATAT
TACACATTAATTATCCCAGTGAAACTTGCTGGCATATGATTTTCTCTCTCTCTNNNNNNNNNNCGCACACGCACACACAA
AAACACATTCCCTCTCTTCTTTGATATTGCAGTTGTACCCTCCGCTTGTCTAGTAGACCTCTCCCACCATCTCCGAGAAG
CAACTCCACCACCCCTCCGGCACTCTACCTCTATCTATCTGTCTGTCCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTTCTCTCTTCTCTCTCTCAACCTATTTACCGTCCTTCGCTTATGTATGGACACCGATCGATCT
CCCTCAAGACATAGGTAGTTAGATCTCTCCTTCTCAACACATATACGAGGTCGATCTACCTCTCTAGTTAGGTCTCTGCC
CCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCTCTCTCTCTCTCTCTGTCCTCTCTCTCTCTCTCAGTATATTTACTTCACCTGACTGCAGTTGCATATTT
GTTGCACCCTTTAGTCCTCGGAGATCAGTTTACAGTTCCAAATTTTGCTTATTTTTTAAAATGACCAGTACCTTTATAGG
CTTTAGAAGTTGCAGGTGCGTAATAAATAATTTGTTTCATCAGTCTTTCTTTCTGCTGCCATCAGCTGACAGTAGAATCC
ACATTGGGTACAATGGTATGTGTTCATAGAAAATGATTTCTTTTGGGATCGTAGTATCTTGGCCGAGATACAATACGTTA
ATAACCCCATGCATCTAAAGAGGTCGTATCTAAAAAGGGCGCGTTGAACTGTAATTATGTTGGTAGTTCAAGAAAGTCC-
----------------------------ATGCTGACATTTGCTTGTCTTCTTGATTTTCTTCCTCTAATTGCTCTGCCAT
-----TTTTTTTGTGACAATTTGCAGTGATTCAAGTGACTCGGATGATGATTATTTGGATACTTGCATATGCTCAGTCAT
GTAAATATCGCAGGGCTGAATCTCCGGTGCATCTTGCGCAGGTGGAGAGTATGAGTGTTTAGCAAGAGCTGTATCTTAAT
GTTATGCATTGGCCTAACAGTCTTGTATAGAAAAAAGGTTCACTCCAACAGGCTCAAACTATCTCATGTAGTGCAAGTCA
GGGCTGCGACCTAGCAAGGACTGGCGACGACGAGCCCATATAATCTGTTGAGTGCGCAAGCAGCTGGAAGTTGCGTCAGA
ATTTTGAGATATCGCCACACATCAGACTAGAAATGG-AAAAAAGTGACCCGCGGCGTTCGCAGCAGCAGCCTTGCTC---
---------------TTATGTGTGATAAGCAAAATGCTCTTAGAA-TCAGACACGGGCATTT-TTGCGGGGCTGGAATTG
CGACCGATTTTTTGTCAATAGTA---TCTGCCTCTTGGCATGTTAACTAACTAGCTGATGTTCCTG----TCTGTCA--G
TCTGATGCTGTCATCGCACGCTTAACATTATTTTTGCATGAATTGATGCC------CAATGGATGGTGTGATGGCAAAGT
GCAAGGTTTGTAACATTCTTGTGCCCTGTTGGGCAGTTCACTGTCATCAAAAGGGACCTCTTTATTTT-------CGGCA
CAAGATGAAGTTGCTCAGAGCC---CAGTA--------------------------------------------------
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>chr5A_624
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-----------CTCCGGCCCCTCCAATCCAACCCCCCCGAATCCTCTCCTC------CTCGTCCCCCTCGCGCGGCCTCG
TCTCGATCCGGAAGGAATCTCCCCGGCCGG--CCTCCCTCCGATTCCGCGCCCAACTCCCCAGGTCCGTTCGCTCTTCTC
GCCGTCCGTAGATTCG----GTTCCTCTGGTCCTTTCCGCCCCCGAGATTCACCGATTCCCGTTCCTC---CCGTCTTTG
TTTATCAGCTTGGGGGCATTTTGGAATCGTCCTCCCTCCAGGCGTCTGCCTCGGCCCGAAAGATCCAATTCGGTTGGATT
CCTGCCCCCGAGCCGGAGCCCGGCCGGAGGTGCCCGACCTGAGAGTGCCGCGGAGGGAGTTGATGCCACCCGACGATGGA
TCGCCGAGCCTTCAGGAGTAACTCGTGCAACGGCAAGAACCCGGCGCCTCCCCCCTCGTCCGCGGCGGCGCA---GGCGG
CGGTGTACCGGACGTCCTCGGCGCCGGTGGGGGGCTCCAAGGACAACGTCGGCGAGCGCAAGGCGCTGCTGCCCCGGCGC
CCCGAGGGCGGCACGGCCCGCAAGGCCTACAAGGGCCCCAAGCGGCGGGTGCAGTGGAAGGACACCCACGGCAAGAAGCT
CGCCGAGGTCTTGGAATTCCAGCCTAGGTGAGCAAACCAAGCAACCTCCGTGCATCCTTTCAATATTATTTTTTGTGCTG
CCGTAAATGTGTTACATAGATGCAACATGCTTCTTTTGATCCTGCACTACATGATGCCGATGCCGATGCCGATGAGTTCC
GTGCAATGTTTCCTTGTTTGGCTACCCAAATTAGCTGCATAGGGG-TTGCTTGGATAGTTGGAACTCTTAGGTGGGCGTT
TCTTGTCAAGCAGGAAAGGGGGAAATGATTGCTGTAGTCACGAGGTTCGGTGATCAAATGATATGTATCCTGCCAGGATA
CCACTTTAGAACATGTGATCATGTGATCCATTTGGGGTGTCACAATCTGCCAATTTCAGCTTGCTAGGTGAACTGAATTA
TTGTGCCTGGGGGCTTTTCAACATCCAATTCAAGTAACTGGGGTCTATGCTTCCCTTGAACTCTTCTGAAGTAACATGTG
GCTATAATTTCAGTTTTAGTTTGTCGTTTACCTGACCTATAAATTCACCCCGAGTCCGCCGTGAACTGATTAGACAGAAA
CATATTCTACTTGTGGTGCCGTAAAAGTTAAGTACGAACTGGTGTTGCAAAATGATCGCACAAAGTCTTAGGCAACTAAT
CCATAATCGTGCTGGTGCGCAATTATGAACCATTTGTTGGAGTAGAGATTGGTCATTATTGATGTATCAAGGACTGGAAA
TGATACAGCCCTTCAAAGTGGAAAAAGATGAGAATTTATGATGAGGCTGCTGCATTTCTTGGCCTCAGTGGCAGTATTAT
GTCTCCATTAGCCTATAAGAAAAACTGTGTATTGGTCTAGTATTACTTTTGGCATGCTCTTCTTACAGGCATACAAATGA
TATGTGCTGTCATATGTGAAGGTGGTCTGTATATGTTTCTCAGTTGTTACTGTAACTTTTGGCAATATAATTCAATCTGT
ATGCTAGTTCCTTATTTTTTGAACTTTAGTTTCTGATTTCTAGTCAAGCCATGATCAGTAGACTTTTGGCGATTTTATTT
TCTGAGAGTAGACTTTGGCGATTTGATTAAACAAATTGTTGAAATTTTGATCAGTATCAGTAGACTTTTGGCAATTTTAT
TGAAAATTTAGACGAGTTGAACCTCGTCGTTTATCAAAATGTATTTATTAATTATGCATGTTGGGGTGGGTCTGCACATA
TTAATGCTAATTAGCAGTAGATTATCGAACATCTGATTCCTCAAATGTTCAACTAATAAATTTAGATCCAAATGTAATTA
TTAATGTGGATTATTATGATTTATCTTCAGTAAATTGGGCAATTGTACATTATACTGTTAGGAGCTAAAGTGGAAACCTA
TCCCATTCAGAAGCCTCTCTTCCACGCCAGGGATTATCCCTGTCACTGTTTTCTAGTGCCCTATCCCTGCTCTTCGGACC
TTTACCCTACCCATCATGTAGACTTCGTTAAAAACCTAGGATTGATGACACATATACCTAACAAGGAAACAGTAATTAAA
GTGGCAATACAGTAT-GGTTTATTTATTTCCTTTCATAACAGCTGTAGTTATGTAACTTGTTCTAAGGCCTCCTGCATTG
GAACAGGAAATGTTTAACTTATCCGTACCATTTCTGGATGCAAAATTCGGTTACGCTGCAAGCAAGTTTAGTAATATAGC
AGTCTAATTGTTGGATTGAGGTAATATGTGATATCTGGCGGTTCAGGACTGAGGACTTGGACCACCC---TATGAATTGA
GGACAGTTCGCATGAAAATGCCCT----GTTTCCGCCTACACAACACCATTCCATTAGTCCAAATTAATCTGCATCGGAA
CATTCATTTATTTTAACAACCATGAAATTACACAACTGTAATCTGATCTTAGTTGAACAAGCTTAGGTAAGCTCTGTTAC
TTTGATATTGATATTAGGAAACCCTTGTTTATGTTCTTCACAGTTACAGTTTGATTAGTCCGTGATGG------TACCC-
--TACCCTACATCTTTGTTCGGTGTAAGTTCAGTTTAACCAAGTGAAACTTGTTGGCACATGACTTCTTTTGTTCTC--A
AGATATTTGCTTCACC-TTTTTTTCCATACGACCCCCAACAAGGGACAGGGTTCTCATTTGTCGCACTGTGTAGTAATTG
CTTACAGTTCCAAATTGCTTATTTTTACACGAGCAGTACCTTTTATAGTCTTTGGAGTTGCAGAGGCATAATGAATACTT
TGTTTTATCAGTCTGTAAGTTACAGTGGACCGTAATCTTTACCGCTGAAGTATACTTCTGTAAGAACTTTAATTACCTCA
AGTTGTCTTTCTTTGTACTGGCACCAGCTTTATAATAGAACCGACATAAGGTGCGATGATATGTGTTAATTGAAAATGTT
GTTCTCTTTTGGGATGCTAGATGGTATTAAAAGATTTTGAAATAGA----------------------------------
---------------------------------------------------CCAGTATAATCACAGCAGTATTAGTATAT
TACACATTAATTATCCCAGTGAAACTTGTTGGCATATGATTCTCTCTCC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CTCTCCCTCTCTCAGTATATTTACTTCACCTGACTGCCGTTGCATATTT
ATTGCACCCTTTAGTCCTCGGAGATCAGTTTACAGTTCCACATTTTGCTTTTTTT---AAATGACCAGTACCTTTATAGG
CTTTAGAAGTTGCAGGCGCGTAATAAATAATTTGTTTCATCAGTCTTTCTTTCTGCTGGCATCAACTGACAGTAGAATCC
ACATTGGGTACGATG-TATGTGCTAATAGAAAATGATCTCATTTGGAATCGTAGTATCTTGGCCGAGATACAATACGTTA
ATAACCCCATGCATCTAAAGAGGTGGTATCTAAAAAGGTCTCATTGGACTGTCATTATGTTGGTTGTTCAAGAAAGTCCA
TGTACCCATCACAAGAAAAAAAGAGTCCATGCTGACATTTGCTTG---TCTTGATTTTCTTCCTCTAATTGCTCTGCCAT
CTGTTTTTTTTTTTGACAATTTGCAGTGATTCAAGTGACTCGGATGATGATTATTTGGATACTTGCATATGCTCAGTCAT
GTAAATATTGCAGTGCTGAATCTCCGGTGCATCTTGCGCAGGTGGAGAGTATGAGTGTTTAGCAAGAGCTGTATCTTAAT
GTTATGCATTGGCCTAACAGTCTTGTATAG-AAAAAGGTTCACTCCAACAGGCTCAAACTATCTCATGTAGTGCAAGTCA
GGGCTGCGACCTAGCAAGGACTGGCGACGACGAGCCCATATAATCTGTTGAATGCGCAAGCAGCAGGAAGTTGCGTCAGA
ATTTTGAGATATCACCACACAGCAGTTAGAAAGGGT--AAAAAGGGACCCGCAGCGTTGGCAGCAGCAGCCTTGCTCTCT
TCCTGACGAGTAACGTTATGTGTGATAAGCAAAATGCTCTTAGAAATCAGACACGGGCATTT-TTGCGGGGTTGGAATTG
CGACCGA-TTTTTGTCAATAGTA---TCTGCCTCTTGGCATGTTAACTAACTAGCTGATGTTCCTG----TGTGTGTGTG
TCTGTTGCTGCCATGACACGGTTAACATTATTGTTGCATGAATTGATTGATGCCATCAATGGATGCTGTAATTGCAAAGT
GCAAGGTTTGTCACATTCATGTGCCCTATCAGGCAGTTCACTCTTATCAAAAGGGACCTCTTTTTTTTTCTTCTCCGGCA
GAATATAAGCTTGCTCAGAGCT---CAGTAATTTACC-------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chrUn_2658
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----------------------------------------------------------------------TCTTCGGACC
TCTACCCCACCCATAACATAGACTTTGT-AAAAATGTAGAATTGATAACACATATGCCTAACATGAAAAGT-TAATTAAA
GTGGTAATACAGTAT---TTTTTTTATTTCTTTTTATAACAGCTATAGTTATGTAACTTGTCCCAAGGCCTCCTGCATTG
GAATAGGAAATGCTCAACTTATCCATATCATTTCTAGATGCAA-ATTCGGCTACGCTGCAAGTTTCATAATATACTCC-T
AATCTAATTGTCAGATTGAGGTAATATGTGATATCTAGCGGTTCAGGACTGAGGACTTCAACCACCAGCATATGGATTGA
GGACAGTTCACACAAAAGTGCACATCTAGTTACCACCTAAACAAGACCATTCCATTAGTCCAAATTAATCTGCGTCGTAA
CATTTGATTATTTTAACAACCATGAAATTGCAGAACTGTAATCTAATCTCAGTTGAACGAGCTAAGGTAAGCTCTGTTAT
TTTGATATTGATATTAGGAAACACTTGTTTATGTTCTTCACAGTTACACTTTGGTTAGTCCGTGACGG------TACCCT
AGTACCCAACATCTTTGTTCGGTGTAGGTTTAGTTTAACCAAGTGAAACTTGTTGGCACATGACCTTTTTCTTTTCTCAA
AGATATTTGCTTC-------------------------------------------------------------------
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---------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-S-S--------------------S
------S--S---SS-----S---------SS---S--S-S-----------S--------S-------S-----SSS--
----S---S---S-S---S--------------SSSSSSS----S---------SS---S--SS----------------
-----S--------------S--------S-------------S--------------------S---------------
-----------------------------S-S-S-------------------------------------------S--
----S-S---SS--------------------S---SS--------S-------S---S---------------------
SSS-SS-S---------------------------------------------------------S--------------
-------------S---------------------------------------------------------S--------
------SSSSS---------------------------------------------------------------------
-----------------------SSSSSSSSS--------------------------------------S---------
-----------------------------------------S-----------------------S--------------
-S-------------S----------------------------------------------------------------
----------------------S---------------------SS-S--------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
S-------------------------------------------------------------------------------
------------------S-------------------------------------------S-----------------
------------------------------------------------------S-------------S-----------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S--------------------S-------
---------------------S---------------S----------------SS-----S------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------------------------------------------------S------
-----------------------------------------------------------------S---S----------
------------------S-------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S---------------------------------S-------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S------S----------------------------------------------------------------
---------------------------------------------S----------------------------------
-------------S--S----------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
------------------------------------------------SS--SSS-SSSSSSSSSSSSSS----------
---S---------------------------S----S------------------------S--------------S---
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S-----S---------------
------------------------------------------------------SSS-------S---------------
S-------S---------S---S----------S---S------S-----S-----------------------------
---------S----------------------------------------------------------------------
-----------------S------------------------------------------------S--------S----
--S----------S--------S----S----------------------------------------------------
-----S--------------------------------------------------------------------------
-------S-------------------------------------------S----------------------------
-----------------------------------------------------------------------S--------
-----------------------------------------S--------------------------------------
------------------S---------------SSS------S----S-----S----S--------------------
-----------------------S------------------------------S-S---S-S-----S-----------
-----------------------SSS----------------------------------------SSSS----------
--------------------------------S--------S------SS-----------------------S------
------------------S------------------------------------S-----S------SS----------
------------SSSSSS-SSSSSS------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_43
-----------------------GATGTACTCCCGCCTAGCAC-------------------------------------
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>reverse_1655
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------------------------------------------------------GTCAGCTAGCTAGGCGAACT------
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---------------------------------------------------------
>forward_866
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GATTCACCGATTCCCGTCCA--------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>reverse_2710
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GTCTTCGGACC
TTTACCCTACC---------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>forward_1081
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CTCGTGCAACAGCAAGAACA---------------------------------------
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>reverse_3048
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-------CCACCTGAAAATGCCCTGTT-----------------------------------------------------
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>forward_3027
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-----------------------------------------------ACTGAGGACTTGGACCACCT-------------
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>reverse_4716
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---------------------------------------------------------------------------TTCCA
TGCACCCATCACAGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>forward_3424
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------------------------------------------GGGACAGGGTTCTCATTTGTCA----------------
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>reverse_5848
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-------GCAACACACACACACACACA------------------------------
