>input_sequence_21729
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ATGCCTGCAAAGAAGAGATCCATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTTGCTCAAGCTCGAGGAGCAGAAGAA
TGATGACAAGGATGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCTTCTCCTGCGCCGCGCAAGGGAAGA
GAAAAAGGAATGACGAAGTCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTTTCTCCCTCCCGGTTGATCTGTTCA
TTCATCTACATCTTTCTT----CAGAAGTTGCAGGGAGAAGCTTCGTGTGGCCAAGAGATCGATGCGGCATATACCGGTA
CGTGATCACCGCCTCGTTTTCTGAT-----------GCTGCCTGTGTGTGCATGCGTGAATCCAGTTAATTTTGTTTCAG
ATAACATATCAGGCAAGGGCGCGACGTCGGAGCAGATCATCAACTACATTCTCAACATGCTGGAGCTGTAAGCTTGGGAC
TATGTGTATATCTTTTCTTTTCCGGTTTTGCTACATCACAAGCGAGGTTGCGTTGATGAGAGAGTGGCCGTGGATAGGGG
AGGAAAGGGCGGCGGCAAGAGAGCTAGAAGACGAGGATGTGATAAGGAAAGTTAGGGTTAGGTGACGAAGACGAATTATA
ACCATTGGATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAAGAAG-AAAATGCAATTGTGCTATAGCAAG
ACCCCTTTCGGTTTGAATAGAGCTCATGTGACTGGAATTTTCTTAAATTTAAATCACCTTGCTTCTTCCTCCTCCTCTCT
AGTGGCATGAGGTGGAGCTCATAACCGGCGCTAAGGAAGGAGATGGCCATGAAGAGAGGCCTGGGGCAGGGGGCATTGGC
GCGGGAGAAGAGCTGCCGCCACCTGGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGGGCAGCGCAACTAGCTATGGGATGGGTGGGGTCA
AAGAGAGGGTTGAGGAGCAAATGATGCGGCGACAATGAGAAAGCGATCGGATATTGGGAGAAGAGGGCGACGGTGGCAAC
CGGAGAGCTGAATGACGAGGA---CAGGAAATATAGAAAGTTAAGGGTTTAGGGGGATAAGGCCAAACATAGCCA-----
------TTGGATGGAACTTATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATGTGGCTGGGCTAAAGAAACG-----
------------------------GACCAGGCAACTATGCTCTAGCATATCTTTCTTGTTGGTGTCCTGTGGAAGC----
-ATCGGGAGCACAAGCGCGAACCTGGAAGGTTTTTTTTACATGCGCTTTCTTTGTCCTGTTGCAGGAGAGACGGACTCGA
GTTGTTCGCGATGCCGGATGACATCCAGGTAAAGCATGCACGCATGAACAAGACACGTCTGAAATTTCCCCACACGATTT
ATAGATGGA---AACGTTGACACATTTCTTGTTTCATCTTGACATGGTA------------------GTGCAGGTGGGTG
ATTGCGCGGAACGGGTAGAGAGGCCCGGCGATTTTGCGACGTTAAGGCAGAAGAACACAGATGGCACGTACAAGACACTG
GAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTCCTGTTGTTTCT-----------------TTTCTTTCTTTCTTTA
TTTATAGATGGATCATGGATGGATGGATGGATGGATAGATGGATAGAGAAATGAAGATTTGGTTCCATGATCTTCATGTG
CAGAAGGATGTGTACATGGTGTTCCAGAAAGCAATGTCCATAAACAGCCAGGACACCATACCTTACAAAGAGGTTAATCG
GTCGTTCATTCCTCCTCAATTAACCAACCATACTA--------TACGTTGCATGCATGCCAGAATGAATGAATG----TT
TGTTTTTGGCTCAGGCCGTGGCGTTGCTGGATCAAGCCAAGCAGGTTTTCCTGTCCCTCAAGAAGAACCGGATGTACTCC
GAGTCGGACCTCCTGGCGTGGCGTCACAAGCAACTCGACGCTGGGCCCAGCAAGGCAGCGAGAGATCAACAAGGCGGCGA
TGCTGCCGTTACACCTGCACAGCAGCGGCACAGCATCACGCCGCTGAAGAAGAAGGCCGCCGGCGTCGGCGTCGGCGAGA
AGAAACACCGGATCGGCAAGGGAGGAGTCAGAAGCACGCCATCGCCGGTAAAGAGAGCAAGAAAAGGTAATGA-----GT
CGAGGAGACGACATCGATCCAATGCACATCCAAAGAGACCATTGGTGAATGCTGACGTGATGGCGCTGGCCACAGGGTTC
GCAGCAGCGACAACGGAACCTGGTGGCGCCAGGGAGCTCAAAAGGAGGCTCACTTACAACGATGGCGCTGGTCGGGCAAC
GCCGGTGACGCCGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTTGTTTATGTATGTAAAATAAAAGCCTCTCAAC
----------------------------TATAGGAGTAACAATCATGGATGCATGCGTGTGCGTGGAAACTGAAGCAAAG
TTTTGGTGCAGCAACATCTGCAGGTGCAGGGGGGGCACACGTACCAGGAAAGCCTCCGGCGCTTCGTGCGGGACGCAGGG
CTCAAGGCAAGGCTGGCCACCGAGTTCAAGATCCTCGAATGTGACACTCGGGGCAGGCACAACCCCTCGCCGGCGTCCTA
CTGGAACGGTTTCGCCCCCAACGCCGGCACCTACTACCCCTCAAGTGCCGC---------------------------GA
CGTCACCGGCGGCCGGTGGCGAGCGGCCTTTTCCGGATTGCAAGCCGGGGACGGACGACCTGCTCAGCCTCGTGATGCTG
ATGGGCACGCCCGCCTTCTTGGAGAGAGCCAAGCACATGTTTGGTTACACGGCCTCTGAGGACAGCTCCAAGGTGACCAA
AGCTGCCAAGGAC---GCAAAGGTCACCATCACAGAAGCGCCGCAGACAAGTGACGCAGGCGACCCCGCT---GCCACTT
TCGGACCATTCGCTCCGCCCAAGTTGCCCCTCAGCCGGCTGGGCTTCAGCCAGTTCGCCGCCTCTTCTGCCCAGCCGTTC
ACAGTGAAGTCGAAATCTCCTGGAGAGAAGAGACGAGAATGA--------------------------------------
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>chr4D_1_TraesCS4D01G173900
TCCCCGCACGCCGCCGCTACTTCCTCCACCTCCTCTCCTCGCCGCCGCCCGCACCTTCCCCATTCGCTCCGGTGACCCGT
TGGCGCTTCCCTCGCCTATCCCCGCGTGCCGCTGCTGCTTTCTCCACCTCCTCTCCTCGCCGCCGCCCCTCCAGCACACC
ATTCCTTCGACGAACAGCGCCCGACGGCCATTTGCAGCTCGACGCCCACAAGGTGTTTGACAAAACGCTTGCAAGGTATG
TATTGCTTCAACTTTATATTTTGTAGATGAATTTGGTGAACT----------------ATTTGTTGTGCTGAAAGATAAA
CTATTTGTTTGAGTTGTAATAAATTGAACTATTTATTGTTGATTTATTTTGTGTGTGTTCGATCTTCTTGGTTCTATTTT
GAGTGCGAAATGGTGTTTGTGCTAGGGGCGCGCTGTGTAAATTTAGCGCGCCTGCTGGAGCTATAGCGCCGCGCCATATT
TTGCGGCGCCTGCTCCTGCTACGAGCAA---------AAAAAGGCTATTTCGGCAC--TAAAAATAGTTTAGCGCGTCGC
GCGGTTACGCGCCTGTTG----TGCTCTAACCAGATTCTTTTGCGTGCTA--CACAATGTACAAGGATTAATTTCAGATT
GCAGAAGGTAAGTGTTCACATATGGGAAGCAGCTACTAATGGTAAGTTGGCAACACGCGGGCACAAGCTTTTACAGCCAA
GCTGTAACTGGCTGAGCCATTCTAAGATGATTTCAGAGGCAAACTCCAGATTGTTTCCGTTTCAATGCAATTGCTGCTAT
ATTCACAATCTGTCAAACAGGATTGGCAACCCTTTAAAGCGCCCACGTAAAATAAAAATTTCCATGTCAGGAACAGCATT
CAAAGATTTACAGGGCCATACATACATGCTGGAAAAGTAACTACAGTAGCATGGTACA-TAAGTTATAGCGCATCTCAGG
CTCACATCACCTATTCCTCTTGTTGTTTGTTGGATACAACGACCATGAAGGAAGAAGAAACCAACAAGAAGAAG------
ATGCCTGCAAAGAAGAGATCCATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTTGCTCAAGCTCGAGGAGCAGAAGAA
TGATGACAAGGATGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCTTCTCCTGCGCCGCGCAAGGGAAGA
GAAAAAGGAATGACGAAGTCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTTTCTCCCTCCCGGTTGATCTGTTCA
TTCATCTACATCTTTCTT----CAGAAGTTGCAGGGAGAAGCTTCGTGTGGCCAAGAGATCGATGCGGCATATACCGGTA
CGTGATCACCGCCTCGTTTTCTGAT-----------GCTGCCTGTGTGTGCATGCGTGAATCCAGTTAATTTTGTTTCAG
ATAACATATCAGGCAAGGGCGCGACGTCGGAGCAGATCATCAACTACATTCTCAACATGCTGGAGCTGTAAGCTTGGGAC
TATGTGTATATCTTTTCTTTTCCGGTTTTGCTACATCACAAGCGAGGTTGCGTTGATGAGAGAGTGGCCGTGGATAGGGG
AGGAAAGGGCGGCGGCAAGAGAGCTAGAAGACGAGGATGTGATAAGGAAAGTTAGGGTTAGGTGACGAAGACGAATTATA
ACCATTGGATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAAGAAG-AAAATGCAATTGTGCTATAGCAAG
ACCCCTTTCGGTTTGAATAGAGCTCATGTGACTGGAATTTTCTTAAATTTAAATCACCTTGCTTCTTCCTCCTCCTCTCT
AGTGGCATGAGGTGGAGCTCATAACCGGCGCTAAGGAAGGAGATGGCCATGAAGAGAGGCCTGGGGCAGGGGGCATTGGC
GCGGGAGAAGAGCTGCCGCCACCTGGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGGGCAGCGCAACTAGCTATGGGATGGGTGGGGTCA
AAGAGAGGGTTGAGGAGCAAATGATGCGGCGACAATGAGAAAGCGATCGGATATTGGGAGAAGAGGGCGACGGTGGCAAC
CGGAGAGCTGAATGACGAGGA---CAGGAAATATAGAAAGTTAAGGGTTTAGGGGGATAAGGCCAAACATAGCCA-----
------TTGGATGGAACTTATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATGTGGCTGGGCTAAAGAAACG-----
------------------------GACCAGGCAACTATGCTCTAGCATATCTTTCTTGTTGGTGTCCTGTGGAAGC----
-ATCGGGAGCACAAGCGCGAACCTGGAAGGTTTTTTTTACATGCGCTTTCTTTGTCCTGTTGCAGGAGAGACGGACTCGA
GTTGTTCGCGATGCCGGATGACATCCAGGTAAAGCATGCACGCATGAACAAGACACGTCTGAAATTTCCCCACACGATTT
ATAGATGGA---AACGTTGACACATTTCTTGTTTCATCTTGACATGGTA------------------GTGCAGGTGGGTG
ATTGCGCGGAACGGGTAGAGAGGCCCGGCGATTTTGCGACGTTAAGGCAGAAGAACACAGATGGCACGTACAAGACACTG
GAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTCCTGTTGTTTCT-----------------TTTCTTTCTTTCTTTA
TTTATAGATGGATCATGGATGGATGGATGGATGGATAGATGGATAGAGAAATGAAGATTTGGTTCCATGATCTTCATGTG
CAGAAGGATGTGTACATGGTGTTCCAGAAAGCAATGTCCATAAACAGCCAGGACACCATACCTTACAAAGAGGTTAATCG
GTCGTTCATTCCTCCTCAATTAACCAACCATACTA--------TACGTTGCATGCATGCCAGAATGAATGAATG----TT
TGTTTTTGGCTCAGGCCGTGGCGTTGCTGGATCAAGCCAAGCAGGTTTTCCTGTCCCTCAAGAAGAACCGGATGTACTCC
GAGTCGGACCTCCTGGCGTGGCGTCACAAGCAACTCGACGCTGGGCCCAGCAAGGCAGCGAGAGATCAACAAGGCGGCGA
TGCTGCCGTTACACCTGCACAGCAGCGGCACAGCATCACGCCGCTGAAGAAGAAGGCCGCCGGCGTCGGCGTCGGCGAGA
AGAAACACCGGATCGGCAAGGGAGGAGTCAGAAGCACGCCATCGCCGGTAAAGAGAGCAAGAAAAGGTAATGA-----GT
CGAGGAGACGACATCGATCCAATGCACATCCAAAGAGACCATTGGTGAATGCTGACGTGATGGCGCTGGCCACAGGGTTC
GCAGCAGCGACAACGGAACCTGGTGGCGCCAGGGAGCTCAAAAGGAGGCTCACTTACAACGATGGCGCTGGTCGGGCAAC
GCCGGTGACGCCGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTTGTTTATGTATGTAAAATAAAAGCCTCTCAAC
----------------------------TATAGGAGTAACAATCATGGATGCATGCGTGTGCGTGGAAACTGAAGCAAAG
TTTTGGTGCAGCAACATCTGCAGGTGCAGGGGGGGCACACGTACCAGGAAAGCCTCCGGCGCTTCGTGCGGGACGCAGGG
CTCAAGGCAAGGCTGGCCACCGAGTTCAAGATCCTCGAATGTGACACTCGGGGCAGGCACAACCCCTCGCCGGCGTCCTA
CTGGAACGGTTTCGCCCCCAACGCCGGCACCTACTACCCCTCAAGTGCCGC---------------------------GA
CGTCACCGGCGGCCGGTGGCGAGCGGCCTTTTCCGGATTGCAAGCCGGGGACGGACGACCTGCTCAGCCTCGTGATGCTG
ATGGGCACGCCCGCCTTCTTGGAGAGAGCCAAGCACATGTTTGGTTACACGGCCTCTGAGGACAGCTCCAAGGTGACCAA
AGCTGCCAAGGAC---GCAAAGGTCACCATCACAGAAGCGCCGCAGACAAGTGACGCAGGCGACCCCGCT---GCCACTT
TCGGACCATTCGCTCCGCCCAAGTTGCCCCTCAGCCGGCTGGGCTTCAGCCAGTTCGCCGCCTCTTCTGCCCAGCCGTTC
ACAGTGAAGTCGAAATCTCCTGGAGAGAAGAGACGAGAATGAAGGACGAACCCAGCTCCAGCAAGTTCACTCCGTACATT
TTGT--------GTCGTGTCCTCAACTCCCATTGTATCGCTCAAAGTCAGC-GGGAAATGATAGTATTATTTTAGAATAA
T---TGCAACTAGCATCTCTTTTCTATCTAAACTTAGTCAAACATAGTTTATCATACATAATTGCAACTAGCACCGAGGT
TGCTCATAATCAAATGTATGCGAGTTCC--AACCATCACAGACTTCAGATATACACAAGACATTCTGCCACAGGCCAACA
TAGTTTTTGTTTGTTTTGCCAAGAAATAACATACCAGTAGTAATTAACATGCCACAACAGTTGTATTCTGATTGATACCA
AAGCATATTAGCAGACTGGACTCCTTTCTCTTATGTTTTTCTTAAAGGAAACACTGGCATATTATCTTCTTAACACGTAC
GTAG----------CTCTCAAAGCATCGCACGGCTGTAAACGCCACCTACACTGTAACAATTACTGCATCAGCCAACTTT
AAGAGGCCTCGCAAACTTAAAACAAGAAGCAGCAGCAGGACCTACAGTATGAGTGGCAGCTGCGTTTATCAACCTTTCCA
GGTATCCTTGATGTTCCTGACCGTCCTCAGCGCTTCAACTGCCGACTTGGCACCAAATTTTGCCTGCAGAATCAAGGATA
CAGTCACCAAATGTGTGCCGTTTGTGTTACAAGAAACTGTCTGAGATGGCGCAAGAGTACAATGCAACGGAAAAACCAAA
GAGACCAGATGAGCAGAAACTGGTGAGGAAGAAAAGAAACGACTGAAACTGTACAGCTAATAAAATTGAAATTAAGAGAC
TCCTGATGTGCTAGTTCTTATTTGTGAGGCGACAAGTTACTATCTAAAACTGGCGCTACGAATTACAGAAGATGGTATCA
TCTAGAAGCATAGTAACTAGCGGGTGTGCTTTACGGACCTGTATTTCAGGCAGATCAACACGCATGAAGGTGTTTATCTC
AAGCTCATCTCCTATAGTTGAGGGAA
>chr4A_38
-------------------------------------CTCGCCGCCGCCCGCACCTTCCCCATTCGCTCCGGTGACCCGT
CGACGCTTCCCCTGCCTATCTCCGCG-----CCGCTGCTTCCTCCACCTTCTCTCCTTGCTGCCGCCCCTCGAGCACACC
ATTCCTCCGACGAACAGCGCTCGACGATCGTTTGCGGCTCCGCGCCGACAAGGTGTTTGACAAAACGCTTTCAAGGTATG
TATTGCTTCAACTTTATATTTTGTAGATGAATTTGGTGAACT----------------ATTTGTTGTGA--AAAGATAAA
CTATTTGTTTGAGTTGTAATAAATTGAACTATTTATTGTTGATTTATTTTTTGTGTGTTTGATCTTCTTGGTTCTATTTT
GAGTGCGAAATGTCGTTTGTGCTGGGCGCGCACTGTGTAAATTTAGCGCGCCTGCTGGAGCTATAGCATCACGCCATATT
TTGCCGCGCCTGCTAGAGCAAGCGCCCTGCTGCAAGCAAAAAAGCTATTTCGGCACTGTAAAAATAATTTAGCGCATCGC
GTAGTTGCGCGCCTGTTGGAGATGCTCTTACGAGACTCTTTTGCGTGCTATACACAATGTACAAGGATTAATTTCAGATT
GCAGAAGGTAAGTGTTCACATATGGGAAGCAGCTACTAATGGTAAGTTGGCAACACGCGGAGACAAGCTTTTACAGCCAA
GCTGTAACTGGCTCAGCCATTCTAAGACGATTTCAGAGGCGAACTCCAGATTGTTTCCGTTTCAATGCAATTGCTGCTAT
ATGCACAATCTGTCAAACAGGATTGGCAACCCTTTAAAGCGCCCACGTAAAATAAAAATTTCCATGTCAGGAACAGCATT
CAAAGATTTACAGGGCCATACATC----CTGGAAAAGTAAC-----TAGCATGGTACA-TAAGTTATAGCGCATCTCAGG
CTCACATCACCTATTCCTCTTGTTGTTTGTTGGATACAACGACCATGAAGGAAGAAGAAACCAAGAAGAAGAAGAAGATG
ATGTCTGCAAAGAAGAGATCCATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTTGCTCAAGCTCGAGGAGCAGAAGAA
TGATGACAAGGATGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCTTCTCCTGCGCCGCGCAAGGGAAGA
GAAAAAGGAATGACCAAGTCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTTTCTCTCTCCCGGTTGATCTGTTCA
TTCATCTACATCTTTCTT----CACAAGTTACAGGGAGAAGCTTCGTGTGGCCAAGAGATCGATGCGGCATATACCGGTA
AGTGATCACCGCCTTGTTTTCTGATGGCATGCTGATGCTGCCTGTGTGTGCATGCGTGAATCCAGTTAATTTTGTTTCAG
ATAACATGTCAGGCAAGGACGCGACATCGGAGCAGATCATCGACTACATTCTCAACATGCTGGAGCTGTAAGCTTGGGAC
TATGTGTATATCTTTTCTTTTCCTGTTTTGCTACAGCACAAGCGATGTTGCGTTGATGAGAGAGTGGCCGTAGATGGGGG
AGGAAAGGGCGGCGGCAAGAGGGCTAGAAGATGAGGATGTGATAAGGAAAGTTGGGGTTAGGTGAAGAAAACGAATTATA
ACCATTGAATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAA----AAAAATGCAATTGTGCTACGGCAAG
ACCCCTTTCGGTTTGAATAGAGCTCATGTGACTGGAATTCTCTTAAATTTAAATCACCTTGCTTCTTCCTCCTCCCCTCT
AGTGGCATGAGGTGGAGCTCACAACCGGCGGT----AAGGAGATGGCCGTAAAGAGAGGCCTGGGGCTGGGGGCATTGGC
GCGGGAGAAGAGCTGCCACCACCTGGACATAGAGAGATGTTTGTGTGCGTGTGCGGAGAGGAGGGGGGGAGGGGTCATGT
AGAGAGCAAGGTGAGGAGGGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------AAGGGGGCTGCGTGACTAGCTATGGGGTGGGTGGGGTCA
AAGAGCGGGTTGAGGAGCAAATGATGCGG------------AGTGATCGGATATAGGGAGAAGAGGGCGACGGTGGCAAC
CAGAGAGCTGAATGACGAGGAGGACAGTAAATATAGAAAGTTAAGGGTTTAGGGGGATAAGGCGAAACATAGGAAGGTCT
TTTTTGTTGGATGGAACTCATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATGTGGCTTGGCTAAAGAAAGATTTTT
GAAACTAGCTTGGCTAAAGAAAGTGACCAGGCAACTGTACTCAAGCATCTCTTTCTTGTTGGTCGGGCTGTGGCGTTGTG
TATCGGGAGCACAAGCGCGAACCTGGAAGGTCTTTTTTACATGCGTTTTGTTTGTCCCGTTGCAGGAGAGACAGACTTGA
GTTGTTTGCGATGCCGGATGACATCCAGGTAAACCATGCTCGCATGAACAAGGCACGTCTGAAATTTCCCCTCGCGATTT
ATAAATGGAA---ACGTTGACATATTTCTTGTTTCATCTTGACATGGTG------------------GTGCAGGTGGGTG
ATTGCACGGAACGGGTAGAGAGGCCCGGCGATTTCGCGACGTTAAGGCAGAAGAACACAGATGGCACCTACAAGACGCTA
GAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTCCTGTTGTTTATTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTA
TTTATTTATTT-----------------------ATAGATAGATAGAGAAATGAACATTTGGTTCCATGATCTTCATGTG
CAGAAGGATGTGTACATGGTGTTCCAGAAGGCAATGTCCATAAACAGCCAGGACACCATACCTTACAAAGAGGTTAGTCG
GTCGTTCAT---TCCTCAATTAAGCAACCATACTA--------TACGTTGCATGCATGCCAGAATGAATGCATGAATGTT
TGTTTTTGGTGCAGGCCGTGGCGTTGCTGGATCAAGCCAAGCAGGTTTTCCTGTCCCTCAAGAAGAACCGGATGTACTCC
GAGTCGGACCTCCTGGCCTGGCGTCACAAGCAACTCGACGCCGGGCCCAGCAAGGCAGCGAGAGATCAACAAGGCGGCGA
TGCTGCTGTTACACCTGCACAGCAGCGGCCCAGCATCACGCCGCTGAGGAAGAAGGC---------------CGGCGAGA
AGAAACACCAGATCGGCAAGGGAGGAATCAGAAGCACGCCATCGCCGGTAAAGAGAGCAAGAAAAGGTAATGA-----GT
CGATGAGACGACATCGATCCAATGCACATCCAAAGAGAACATTGCTGAATGCTGACGTGATGGCGCTGGCCACAGGGTTC
GCAGCAGCGACAACGGAACCTGGTGGCGCCAGGGAGCTCAAAAGGAGGCTCACTTACAACGATGTCGCTGGTCGGGCAAC
GCCGGTGACGCTGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTCGTTTATGTATGTAAAATATACTCTACTACTC
CTATAG------------------------TAGGAGTAACAATCATGGATGC----------GTGGGAACTGAAGC-AAG
TTTTGGTGCAGCAACATGCGCAGGTGCAGGGAGGGCACACGTACCAGGAAAGCCTCCGGCGCTACGTGCGGGACGCAGGG
CTCAAGGCAAGGCTGGCCACCGAGTTTAAGATCCTCGAATGTGACACTCGGGGCAGGCACAACCCCTCGCCGGCCTCCTA
CTGGAACGGTTTCGCCCCCAACGCCGGCACCTACTACCCCTCAAGTGCCGCCGCCGCCGCCTCCACCGCGCTCCGCACAA
TGTCACCGGCGTCCGGTGGCGAGCGGCCTTTTCCGGATTGCAAGCTGGAGACGGACGACCTGCTCAGCCTCGTCATGCTC
ATGGGCACGCCCGCCTTCTTGGAGAGAGCTAAGCACATGTTTGGTTACACGGCCGCTGAGGACAGCTCCAAGGTGACCAG
AGCGGCCGGCGAC---GCAAAGGTCGCCGTCACAGAAGCGCCACAGACGAGTGAGCCAGGCGATCCGGCGGCAGCCACTT
TCGGACCGTTCGCTCCGCCCAAGTTGCCCCTTAGCCGGCTGGGCTTCAGCCAGTTCGCCGGCTCTTCGGCCCAGCCGTTC
ATGGTGAAGTCGAATTCTGCCGGGGAGAAGAGACGAGAATGAAGGACGAACCCAACTCCAGCAAGTTCACTCCGTCCATT
TTGT--------GTCGTGTCCTTGACTCCCATTATATCGCTCAGCGTCAGCGGGGAAATGATAGTATTATTTTAGAATAA
TAATTGCAACTAGCATCTCTTTTCTATCTAAACTTAGTCAGACACCT----------------------------GAGGT
TGCTCATCATCAAATGTATGCAAGTTCCAAAACCATCACAGACTTCAGATATACACAAGACTTTCTGCCACAGGCCAACA
TATTTTTTTTT--TTTTGCCAAGAAATAACATACCGGAAGTAATTAACATGCCACAACAGTTGTTTTCTGATTGCTACCC
AAGCATATTAGCAGACTGGACTCCTTTCTCTTATGTTTTTCTTAAAGGAAACACTGGCATATTACCTTCTTAACACGTAT
GTAGCTCGTTGCCACTCTCAAAGCATCGCACGGCTGTAAACGCCACCTACACCGTAACAATTACTGCATCAGCCAACTTC
AAGAGGTCTCGCAAACTTAAAACAAGAAGCAGCAGCAGGACCTACAGTATGAATGGCAGCTGCATTTATCAACCTTTCCA
GGTATCCTTGATGTTCCTGACCGTCCTCAGCGCTTCAACTGCCGACTTGGCACCAAATTTTGCCTGCAGAATCAAGGATA
CAGTCACCAAATGTGTGCCGTTTGTATTAC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGAAGCATAGTAACTAGCGGGTGTGCTTTATGGACCTGTATTTCAGGCAGATCAACACGCATGAAGGTGTTTATCTC
AAACTCATCTCCTATAGTTGAGGGAA
>chr4B_43
------------------------------------------CGCCGCCCGCACCTTCCTCATTCGCTCCGGTAACCCGT
TGGCGCTTCCCCCGCCTATCCCCGCGCGCCACCGCTGCTTCCTCCACCTTCTCTCCCCGCCGCCACCCCTTGAGCACACC
GTTCCTCCGACGAACAGCGCCCGACAGCCGTTTGCAGCTCGGCGCCCACAAGGTGTTTGGCAAAACGCTTGCAAGGTATG
TATTGCTTCAACTTTATATTTTGTGGATGAATTTGGTGAACTATTGTGGTGGTGAACTATTTGTTGTGCTGGAAGATAAA
CTATTTGTTTGAGTTGTAATAAATTGAACTATTTATTGTTGATTTATTTTTTGTGTGTTTGATCTTCTTGATTCTATTTT
GAGTGCGAAATGTTGTTTGTGCTGGGCGC--------------------------TGGAGCTACAGCGCCGCACCATATT
TTGCAGCGCC-----CTTCTGCGAGCGA---------AAAAAGACTATTTCGACACTATAAAAATAATTTAGCGCGTTGC
GCGGTTGCGCGCTTGTTGGAGATGCTCTTAGCAGATTCTTTCGCGTTC--TACACAGTGTACAAGGATTAATTTCAGATT
GCAGAAGGCAAGTGTTCACATATGGGAAGCAGCTACTAATGGTAAGTTGGCAACACGCGGGCACAAGCTTTTACAGCCAA
GCTGTAACTGGCTCAGCCATTCTAAGACGATTTCAGAGGCAAACTCCAGATTGTTTCTGCTTCAATGCAATTGCTGCTAT
GTGCACAATCTGTCAAACAGGATTGGCAACCCTTTAAAGTGCCCACGTAAAATAAAAATTTGCATGTCAGGAACAGCATT
CAAAGATTTACAGGGCCATACAAT----CTGGAAAAGTAACCACCGTAGCATGGTACATTAAGTTATAGCGCATCTCAGG
CTCACATCACCTATTCCTCTTGTTGTTTGTTGGATACAACGACCATGAAGGAAGAAGAAACCAAGAAGAAGAAGAAG---
---------------------ATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTTGCTCAAGCTCGAGGAGCAGAAGAA
TGATGACAAGGACGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCTTCTCCTGCGCCGCGCAAGGGAAGA
GAAAAAGGAATGACGAAATCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTTTCTCTCTCCCGGTTGATTTGTTCA
TTCATCTACATCTTTCTTTCTTCACAAGTTACAGGGAGAAGCTTCGTGTGGCCAAGAGATCGATGCGGCATATACTGGTA
CGTGATCACCGCCTCGTTTTCTCATGGCATATGC-TGCTGCCTGTGTGTGCATGCGTGAATCCAGTTAATTTTGTTTCAG
ATAACATGTCAGGCAAGGGCGCGACGTCGGAGCAGATCATCGACTACATTCTCAACATGCTGGAGCTGTAAGCTTGGGAC
TATGTGTATATCTTTTCTTTTCCGGTTTTGCTACAGCACAAGCGAGGTTGCGTTGATGAGAGAGTGGCCGTAGATGGGGG
AGGAAAGGGCCGCGGCAAGAGAGCTAGAAGATGAGGATGTGATAAGGAAAGTTAGGGTTAGGTGAAGAAGACGAATTATA
ACCATTGGATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAAGAAAAAAAATGCAATTGTGCTATGGCAAG
ACCCCTTTCGGTTTGAATAGAGCTCGTGTGACTGGAATTTTCTAAAATTCAAATCACCTTGTTTCTTCCTCCTCCCCTCT
AGTGGCATGAGGTGGAGCTCACAACCGGCGCTAAGGAAGGAGATAGCCGTAAAGGGAGGCCTGGGGCTGGGGGCATTGGC
GCGGGAGAAGAGT----------------TAGAGAGATGTTTGCGTGCGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----
---------------------------------------------------------------TGGGATGGGTGGGGTCA
AAGAGCGGGTTGAGGAGCAAATGATGCGGCAACA-----AAAGTGATCGGATATTGGGAGAAGAGGGTGATAGTGGCAAC
CGGAGAGCTGAATGACGAGGAGGGCAGGAAATATAGGAAGTTAAGGGTTTAGGGGGATAAGGCGAAACATAGCCA-----
------TTGGATGGAACTCATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATGTGGCTTGGCTAAAGAAAGGG----
--------------------------------------ACTCAAGCATCTCTTTCTTGTTGGTCGGGCTGTGGTGTTGTG
TATCGGGAGCACAAGCGCGAACCTGGAAGGTCTTCTTTACATGCGTTTTCTTTGTCCCGTTGCAGGAGAGACAGACTCGA
GTTGTTTGCGATGCCGGATGACATCCAGGTAAACCATGCAGGC--------------TCTGAAATTTCCCCTCGCGATTT
ATAGATGGAAACAACGTTGACACATTTCTTGTTTCATCTTGACATGGTGGTGCTGGTGCTGGTGCTGGTGCAGGTGGGTG
ATTGCGCGGAACGGGTAGAGAGGCCTGGCGATTTTGCGACGTTAAGGCAGAAGAACACAGATGGCACGTACAAGACACTA
GAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTTCTCCTGTTTCT-----------------TTTCTTTCTTTCTTTC
TTT-----------------------ATAGATGGATAGATGGATAGAAAAATGAGCATTTGGTTCCATGATCTTCATGTG
CAGAAGGATGTGTACATTGTGTTCCAGAAGGCAATGTCCATAAACAGCCAGGACACCATACCTTACAAAGAGGTTAATCG
GTCGTTCAT---TCCTCAATTAACCAACCATACTACTATACAGTACGTTGCATGCATGCCAGAATGAATGAATG----TT
TGTTTTTGGTGCAGGCCGTGGCGTTGCTGGATCAAGCCAGGCAGGTTTTCCAGTCTCTGAAGAAGAACCGGATGTACTCC
GAGTCGGACCTGCTGGCGTGGCGTCACAAGCAACTCGACGCCGGGCCCAGCAACGCAGCGAGAGATCAACAAGGCGGCGA
TGCTGCCGTTACACCTGCACAGCAGCGGCCCAGCATCACGCCGCTGAGGAAGAAGGC---------------CGGCGAGA
AGAAACACCAGATCAA---------------AAGCACGCCATCGCCCGTAAAGAGAGCAAGAAAAGGTAATGTGTCTGGT
CGAGGAGACGACATCCAAAGAGAACGT--------------TTGGTGAATGCTGACGTGATGGCGCTGGCCACAGGATTC
GCAGCAGCGACAAGGGAACCTGGTGGTGCCAGGGAGCTGAACAGGAAGCTCAGTTACAACGATGGCGCTGGTCGGGCAAC
GCCGGTGACGCTGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTCGTTTATGTATGTAAAATATAAAAGCCCCAGA
TGCTCTCAACTACTACTCGATCCTACTGTATATGAGTAACAATCATGGGTGC----------GTGGGAACTGAAGC-AAG
TTTTGGTGCAGCAACATCCGCAGGTGCAGGGGGGGCACACGTACCAGGACAGCCTCCGGCGCTTCGTGCGGCACGCAGGG
CTCAAAGCAAGGCTGGCCACCGAGTTCAAGATCCTCGACTGTGACACTCGGGGCAGGCACAACCCCTCGCCGGCCTCCTA
CTGGAACGGTTTCACCCCCAACGCTGCCACCTACTACCCCTCAGGTGCCGCCA---------CCACCTCGCCCCGCACGA
CGTCACCGTCGTCCGGTGCCGAGCGGCCGTTTCCGGATTGCAAGCTGGAGACGGACGACCTGCTCAGCCTCGTCATGCTC
ATGGGCACGCCCGCCTTCTTGGAGAGAGCCAAGCACATGTTTGGTTACACGGGCGCTGAGGACATCTCCAAGGTGACCAG
AGCGGCCGACGACGATGCAAAGGTCACCGTCTCAGAAGCGCCGCAGACAAGTGATGCAGGCGATCCAGCG---GCCACTT
TCGGACCGTTCGCTCCGCCCAAGTTGCCCCTTAGCCGGCTGGGCTTCAGCCAGTTCGCCGGCTCTTCGGCCCAGCCGTTC
ATGGTGAAGTCGAATTCTCCTTGGGAGAAGAGACGAGAATGAAGGACGAACCCAGCTCCAGCAAGTTCACTCCGTCCATT
TCACGTCTTCACGTCGTGTCCTCGACTCCCATTATATTGCTCAACGTCAGCGGGGAAATGATAGTATTATTTTAGAATAA
TAATTACAACTAGCATCTCTTTTCTATCTAACCTTAGTCAGACACCT----------------------------GAGGT
TGCTCATCATCAAATGTATGCAAGTTCC--AACCATCACAGACTTCAGATATACACAAGACATTCTGCCACAGGACAACA
TATTTTTTTTT-GTTTTGCCAAGAAATAACATGCCAGTAGTAATTAACATGCCACAACAGTTGTTTTCTGATTGATACCG
AAGCATATTAGCAGACTGGACTCCTTTCTCTTATATTTTTCTTAAAGGAAACACTGGCATATTACCTTCTTAACACGTAT
GTAGCTCGTTACCACTCTCAAAGCATCGCACGGCTGTAAACGCCACCTACACCGTAACAATTACTGCATCAGCCAACTTT
AAGAGGCCTCGCAAACTTAAAACAAGAAGCAGCAGCAGGACCTACAGTATGAGTGGCAGCTGCGTTTATCAACCTTTCCA
GGTATCCTTGATGTTCCTGACCGTCCTCAGCGCTTCAACTGCCGACTTGGCACCAAATTTTGCCTGCAGAATCAAGGATA
CAGTCACCAAACGTGTGTCGTTTGTGTTACAAGAAACTGTCTGAGATGGCGCAAGAGTGCAATGCAACAAAAAAACCAAA
GAGACCAGATGAGCAAAAACTGGTGAGGAAGAAAAGAAACGACTGAAACTGTACAGCTAATAAAATTGAAATTAAGAGAC
TCCTGATGTGGTAGTTCTTATTTGTGAGGTGACAAGTTACTATCTAAAACTGGCACTACGAATTACAGAAGATGGTATCA
TCTAGAAGCACAGTAACTAGCGGGTGTGCTTTACGGACCTGTATTTCAGGCAGATCAACACGCATGAAGGTGTTTATCTC
AAACTCATCTCCTATAGTTGAGGGAA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
-----------S--------------S---S-S-------S--------S---------------------S--------
------S----------------------S-----------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S--------S--------------------
------------S----------S--S----S------------------------------------------------
----S---------S-----------S---------------------------------------S-------------
------S---------------------S---------------------------------------------------
--------------------------------------------------------------------------------
-------------S-------------S----------------------------------------------------
--S-----------------------------------------------------------------------------
-----------------------SSSSS-------------S--S-----------------------------------
----------------------------------------------------------------S---------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
------------------------S-----S-------------------------------------------------
--------------------------------------------------------------------------------
-------S---------------------------------S--------------------------------------
-----------------------------------S-----------------------------------S---S----
-------------------------------S---------------------------------S--------------
------------------------------------------------------S-------------------S-----
---------------------------------------------------------------------------S----
---------------------S--------------------------S-S----------------S------------
-----------------S-----------SSSSSSSSSSSSSSSSSSSSSSSS---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---SS-------------------------
-----S------------------------S---SSSSS----S------------------------------------
---------------------------------------------------------------S----------------
------------------S------------------------------------------S-----------S------
------------------------------------S-S---S-----S--------------SSSSSSSS-SS-S----
-------------------------------S-------------S-----------S--------------S-------
------S--------------------------S------------------S------------------S-S------
------------------------------------------------S-------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
-----SS--SSSSSSSSSSSSSSSSS--S--------------------------S------------------------
-----------------------------S--------------------------------------------------
---------SSS--------------------------------------------------------------------
---------SS---------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-----------------------------S-----------------S---------SSSSSSSSSSSSSSS--------
---------S----------------S-----------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------S------------------------------------S------------------S--S-SS----S-
----------------------------------------------------SSSSSSSSSS----S---------S---
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
-----------S---------------------------------S--S------------------------S-----S
------------------------------------------------------S------------------------S
---S---S-S------------------S-------------------------S--------S--S--S----------
-------S-----------------------S----------------------------S------S------------
-SS-----------S--------S---------------------------------------------------S----
-----------------------S---------S----------S-----------------------------------
----------------------------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-------S-------------S----------------------------------------------------------
--S-----S--S----------------------------------------------------S--------------S
----------------------------------------------------------------S--------------S
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------SS----------
---------------S----------------------------------------------------------------
----------S------------------S------------------------S-------------------------
--------------------------------------------------------------------------------
--S-----------------------
>forward_167
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-------------------------------------------------------------------CCTCCAGCACACC
ATTCCTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1261
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------------------------------------------------------------CCTCCCGGTTGATCTGTTCA
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--------------------------
>forward_734
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---------------------------------------------------------------------------GCCAA
GCTGTAACTGGCTG------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2698
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---------------------------------------------------------TGTTGCAGGAGAGACGGACT---
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--------------------------
>forward_1596
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--------------------------------------------------------TGAGAGAGTGGCCGTGGATA----
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>reverse_2960
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-------------------------------------------------------------------------------G
GAGCAATTCGAGGTCAGCC-------------------------------------------------------------
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>forward_2636
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--------------------------------------------------------TGTTGGTGTCCTGTGGAAGC----
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>reverse_4706
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-----------------------------------------------------------------AACTAGCACCGAGGT
TGCTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
