>input_sequence_21598
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----------------------------------------------------------------------ATGGATCTGG
CAACTGTACCTCGACCTGCAAGTGAGAAGGTACACCTGGCAGTGGGGGATGATGCTAAGCAGTGTTGGCTTGCTCTCCGA
TGGGCTTTGCACTTCATCCCACCACAGATGTTGTTAGTTCTTGTCCACATCCACAGGCCAAGTACCCCAAGTAAGAATTC
TCTTTTT-GTCTGCTTCTAGTTTGTCTGATGTTATGTAACCCCTTGATTCTAATGAATCACAAGTAGTCATGCTGCTTGG
AGAAAATTTACAGATATTTTTCACCTC-TTAACATTTTGTAGCTGTTTGTTTCAGCCGTATTGGGAGCTTCAGTGCCAGC
AAGTAAGTTGACAGAAGATCATGTTAGAGAGCACAGGATAAGTGAGAGAAACATGATCGAGAAGAACTTAGAGGAATGCT
TGCAGATGTATAAGGTGAATGCTGAAACTGAAATGATTAGTCCGCAGCTCTGTTCTTTTGTATACAATGCATATTTTTTA
AGGAAGGAGTAGGACACTGATATTGTGCATTTCTTTTAGGTCAAAGCAGAGATACTCATAATTGACAAAGATGATGTGGT
CGTTGGACTTGGGGAGGTAGTCAAAGACCAGAAGGTTACCACACTCGTTATGGGCGTTAAAAGAAGGTATATTACTACTT
ACATATGTTTCCTGGGTGTCGGTAGCAGCCTGGCGCAGTATTAAATATCGCCGCAACTTACTAATGCATTTCATGTGACC
TCTGGGTTTTGATATAGAAAACATGGCTGGAAGAGCAAGACAGCAGATGCTTTGGAAAAACAGGCCGACTGCTTGTGCAA
TATTCTGTATCTTCATAAGGGAATTCTTGTTGCGAGCAGGTACTGGACAAATCCTTAATCAACCTTGCATGTTCTTTGGG
AGGTTATATTTTAGACCATGCAGAGAAACTGCATGTCAATGCATTAAGATAGTAAACGAGTCTGAACAAACCAAGAATGG
CCAAGCACCCAAAGGAACGATACGACTAAAGAAACAGAAACTGTACAATGCTGTACTGAAATAAAATAAAAACTGTACAA
GGCTAAGCCAAAACTCGCAACAGACCTTTTGCTCCCACCATGTACCACAGCTTTGTATTCATCCTTGTCTCTGTCGATGA
GCTGCTCTACCAACATGGGCTCATTGTTGAAAACCCTGTTGTTACAGTCCTTCCAGATGAACCAAGCTACCAAAATAGTT
GTCGTGTCGAAGCCCCTCCTGCTCATTTTGGTGAAGGCCTGACATGCAATGCAGAAGACCAAGTCAGGTCAAAACACCGT
GGTAGATCCGTAGATGTTACTGCCAGGTGGGAGGTTAGAACACAGTTGAACTGTTAGGCCTCTATGACAATCGACAAAAC
AAATTCACCTCCTTCCCTTTTGGTACCACTTCAAGCTTTAAAAAAATTACCTTGCCGGCATATATTCTGCTTATTAATAG
AAAAAAAAA-TAAGTGCAGTTCCAGTAATCAACCACATAATGGTATTGTTCTTTTCTTGATATAAAAGGAGACACGAGCA
TTCATTTGAAGTCCATTGTTTTATCACGTGGCATATTTTTTTCCAGCATATCCCCATTTCTCGGTTGTAAGGGAACATGA
TTGACTGTACTTTTTTT-CCTGCCAGAGTAAAAGATTGTATTACAGTTCCCTAAT-AAACATAAAATTTATTGTTACCCT
GACATGACAATGTTGTTGGTCGCGAGATCTTATGGGTTTCACCTCTAGCCTGCCCCAACTTGTTTGGCACTAAAGGCTTT
GTTGTTGTTGTTGACATGACAATGTTGCTAGCTTCTGTGATCTGTTCATCAGCATTTTTCTTACACTCTCGTTTATTTAC
AGGCATCAGCACACAGACAGGAAAATTGGCATTCCTTCTTTGGTAGGTTGCCACTTCTCAGGCAGTAATAGTAACACCAC
GAAATCCTCTTCTTTCTTCAACTCTCGAAGCACCACCGACACCTTTGACACGGAACATCTTGATGACCCTTCCCTAGTGA
TGAATTCAACCTATATATACAATGATTGTAGATTCAATGCTATAATTGGTCTCAAGTCATTTGACACTTTTAAGGAGCTA
GTAAAGCAGCAAATTTTAGCTGAGCACTCAAGGGACTTGTACCAGGCATTCAACATCAAATACTGTGATATCTTCACTGG
GTGCCAGTTAATTGGTGGCTTTGACTCACTCATTGGAGTAGATCCCCAACATTTAGGGGAGGAACATTGGAAATCCATCA
AGAGCTGGCCTGCAGTGTTGGAGTATATTGTCAGTGTTCTCAAGACATTGCAGATGCAGCTCCTCATGCAGAATCATCGT
GCATGCAATGGATTTACACATGATGACCTTTCAGAAGCAGTGAAAAAACCTATTAGGCGTCTGTTCACTGTTGCTTCAAT
TGTATCTGACCATGAGGTGCGGAAGTCACCAGAGAAGCTATTCTGTGTATTGAACATGTACACAGCACTCATAGATGCTG
CCCCCACTCTCAGGAAAGTCTTCTCTACAAAATCCATCAGAGAT------------GTTCTTCAAGAACTGGAGGACTCT
GTAAGGGGAATACTTAAAGAACTTAAAGGCTTAATTCAGACATACAACTCACCAAAAGTAGTGCAGGATGGAGATATCCT
GCCGATATGTGGGTACCTCATGAGATACATCATGCTCCTAGTGAAGCATAAAGGTTCACTTGATACGATTCTATCTCATG
ATTACACTGACAGTCTGTTGAAAGTTGAGGGAATGAGTTTGACAAGTGGTCTAGTATCTGGGCTCATTACTGATCTAGAA
TCAGTAATTGATAAACAGTCAAAGCAATGTGCTGCTTCTAAAGGACTCCAATTCATATTCTTGATGAACAACGTACATTT
GATACTTCAAGAAGTCAAGCAATCAGATGTACAGCTGACTGTAAAAGCCAAGTGGTTTGAGAAACGCCGATCCTTGATCA
AGGGGTACATAAAGAGTTACCTATCTGCATCATGGGGACCTGTTACGTCCACCTTGGAGGTTGCAAAAAGCATGTCTCCC
AGTAAAAAGGCAAGGATAAACTTGCTCAACTTCTGGTACACGGCTCCGCCTCTGACTCCCTTGCAGAGTTTTGCTTCGTC
TTTCAATGAAGCTTGCAGTAGCCAGATTTGCTTGAAGGTACCCAGTCCAGCTCTTCGAGATGAGCTTCGTGTAAAGATCC
TTGAGTTTGTTAGTCGAGCGTACCATGAACACTTGGCAGGTCAGAGACAGTCTGCAGAACAAAATGCGAGGGAATTTGAG
TCGGAGTGGAAAACCAAAATTAGTGATTTGTTTGAAGGATGA--------------------------------------
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-
>chr3B_1_TraesCS3B01G468100
AAATAATGTGTATGTTCTACATAAATTGCTGGCATACTACAAGTTGTACTGAAATCCTTGTTTCCTCATTATCGTGTGCC
ATATTGTAGGAGTTGCCATTCTTTACTTGACATGAGACGTTTTTGTAATGTGGG---CATCCTTCGCCAAAATATTTGTC
CATTTCGGGAC-------CATAAGGTGTGATTCAACTCCATTGGGG-AGTGAAATAGGGGAATCACGGGGAAAGAATCAA
GGGTATCTTTTTGTTTTGTGGGAAAGAATTAGGGGTATCTGGTTGCCATATAAATCAAGTTTGTACTTAATTGTACCTTT
TCTGTTCCAAACTAGATGCCATTTTGGCTTTTCATGGTCAGTGCTAA----------TTTTACTGTTAGTTTTATATGAA
TACGGTGTGTAAAGGAGTCGGGAAATATTATGAAACCTATGCACGACAAACCTAATGAGTACAATTTCAACATAACCAAC
TAAAATTGTGTTACTAATTATTACTTTTCAAAGATAGAGAAGTTTGACTGGACACCTAAAGCATCATCCATTTTGGAATG
GAGCTAGTAGCAACT--------AAAAGTGTTTGTGAATACGCCGTTCTGTCTGTGTTAACAAGGATGATCATTGTACCC
GACGTACAGAACTAGACAGATATGATGCATTGAGCATCAGAACTTTGGTTTTACCTCTCCTTATTGTCCTATTCGGATTC
GGAAATTTCCTTGAAGCTGACAGAAACTTGCCCTACACTCCTTCATAGAATTATTCCTTCAAAATGAGAATATGCTGTCC
AGATAAG-CCATTGTGGTTTGGAGTTATTCTTTGTTTCCTAGTGACCTAAGAGAAACTTAACTCCATCTTTAAAACAATA
ATCTACCATCAACAGAAGGCATTGCGCATCTGCGCAGACAATAAACCACAGAACACAGACCATCTGGGGGATTCTAAGTA
CAGGTGGAGCTAACATGTGCATGAATGTTGTTAATTAATGCACTAAAGGAAATAAAGGACATCTGAGCTCATGGATCTGG
CAACTGTACCTCGACCTGCAAGTGAGAAGGTACACCTGGCAGTGGGGGATGATGCTAAGCAGTGTTGGCTTGCTCTCCGA
TGGGCTTTGCACTTCATCCCACCACAGATGTTGTTAGTTCTTGTCCACATCCACAGGCCAAGTACCCCAAGTAAGAATTC
TCTTTTT-GTCTGCTTCTAGTTTGTCTGATGTTATGTAACCCCTTGATTCTAATGAATCACAAGTAGTCATGCTGCTTGG
AGAAAATTTACAGATATTTTTCACCTC-TTAACATTTTGTAGCTGTTTGTTTCAGCCGTATTGGGAGCTTCAGTGCCAGC
AAGTAAGTTGACAGAAGATCATGTTAGAGAGCACAGGATAAGTGAGAGAAACATGATCGAGAAGAACTTAGAGGAATGCT
TGCAGATGTATAAGGTGAATGCTGAAACTGAAATGATTAGTCCGCAGCTCTGTTCTTTTGTATACAATGCATATTTTTTA
AGGAAGGAGTAGGACACTGATATTGTGCATTTCTTTTAGGTCAAAGCAGAGATACTCATAATTGACAAAGATGATGTGGT
CGTTGGACTTGGGGAGGTAGTCAAAGACCAGAAGGTTACCACACTCGTTATGGGCGTTAAAAGAAGGTATATTACTACTT
ACATATGTTTCCTGGGTGTCGGTAGCAGCCTGGCGCAGTATTAAATATCGCCGCAACTTACTAATGCATTTCATGTGACC
TCTGGGTTTTGATATAGAAAACATGGCTGGAAGAGCAAGACAGCAGATGCTTTGGAAAAACAGGCCGACTGCTTGTGCAA
TATTCTGTATCTTCATAAGGGAATTCTTGTTGCGAGCAGGTACTGGACAAATCCTTAATCAACCTTGCATGTTCTTTGGG
AGGTTATATTTTAGACCATGCAGAGAAACTGCATGTCAATGCATTAAGATAGTAAACGAGTCTGAACAAACCAAGAATGG
CCAAGCACCCAAAGGAACGATACGACTAAAGAAACAGAAACTGTACAATGCTGTACTGAAATAAAATAAAAACTGTACAA
GGCTAAGCCAAAACTCGCAACAGACCTTTTGCTCCCACCATGTACCACAGCTTTGTATTCATCCTTGTCTCTGTCGATGA
GCTGCTCTACCAACATGGGCTCATTGTTGAAAACCCTGTTGTTACAGTCCTTCCAGATGAACCAAGCTACCAAAATAGTT
GTCGTGTCGAAGCCCCTCCTGCTCATTTTGGTGAAGGCCTGACATGCAATGCAGAAGACCAAGTCAGGTCAAAACACCGT
GGTAGATCCGTAGATGTTACTGCCAGGTGGGAGGTTAGAACACAGTTGAACTGTTAGGCCTCTATGACAATCGACAAAAC
AAATTCACCTCCTTCCCTTTTGGTACCACTTCAAGCTTTAAAAAAATTACCTTGCCGGCATATATTCTGCTTATTAATAG
AAAAAAAAA-TAAGTGCAGTTCCAGTAATCAACCACATAATGGTATTGTTCTTTTCTTGATATAAAAGGAGACACGAGCA
TTCATTTGAAGTCCATTGTTTTATCACGTGGCATATTTTTTTCCAGCATATCCCCATTTCTCGGTTGTAAGGGAACATGA
TTGACTGTACTTTTTTT-CCTGCCAGAGTAAAAGATTGTATTACAGTTCCCTAAT-AAACATAAAATTTATTGTTACCCT
GACATGACAATGTTGTTGGTCGCGAGATCTTATGGGTTTCACCTCTAGCCTGCCCCAACTTGTTTGGCACTAAAGGCTTT
GTTGTTGTTGTTGACATGACAATGTTGCTAGCTTCTGTGATCTGTTCATCAGCATTTTTCTTACACTCTCGTTTATTTAC
AGGCATCAGCACACAGACAGGAAAATTGGCATTCCTTCTTTGGTAGGTTGCCACTTCTCAGGCAGTAATAGTAACACCAC
GAAATCCTCTTCTTTCTTCAACTCTCGAAGCACCACCGACACCTTTGACACGGAACATCTTGATGACCCTTCCCTAGTGA
TGAATTCAACCTATATATACAATGATTGTAGATTCAATGCTATAATTGGTCTCAAGTCATTTGACACTTTTAAGGAGCTA
GTAAAGCAGCAAATTTTAGCTGAGCACTCAAGGGACTTGTACCAGGCATTCAACATCAAATACTGTGATATCTTCACTGG
GTGCCAGTTAATTGGTGGCTTTGACTCACTCATTGGAGTAGATCCCCAACATTTAGGGGAGGAACATTGGAAATCCATCA
AGAGCTGGCCTGCAGTGTTGGAGTATATTGTCAGTGTTCTCAAGACATTGCAGATGCAGCTCCTCATGCAGAATCATCGT
GCATGCAATGGATTTACACATGATGACCTTTCAGAAGCAGTGAAAAAACCTATTAGGCGTCTGTTCACTGTTGCTTCAAT
TGTATCTGACCATGAGGTGCGGAAGTCACCAGAGAAGCTATTCTGTGTATTGAACATGTACACAGCACTCATAGATGCTG
CCCCCACTCTCAGGAAAGTCTTCTCTACAAAATCCATCAGAGAT------------GTTCTTCAAGAACTGGAGGACTCT
GTAAGGGGAATACTTAAAGAACTTAAAGGCTTAATTCAGACATACAACTCACCAAAAGTAGTGCAGGATGGAGATATCCT
GCCGATATGTGGGTACCTCATGAGATACATCATGCTCCTAGTGAAGCATAAAGGTTCACTTGATACGATTCTATCTCATG
ATTACACTGACAGTCTGTTGAAAGTTGAGGGAATGAGTTTGACAAGTGGTCTAGTATCTGGGCTCATTACTGATCTAGAA
TCAGTAATTGATAAACAGTCAAAGCAATGTGCTGCTTCTAAAGGACTCCAATTCATATTCTTGATGAACAACGTACATTT
GATACTTCAAGAAGTCAAGCAATCAGATGTACAGCTGACTGTAAAAGCCAAGTGGTTTGAGAAACGCCGATCCTTGATCA
AGGGGTACATAAAGAGTTACCTATCTGCATCATGGGGACCTGTTACGTCCACCTTGGAGGTTGCAAAAAGCATGTCTCCC
AGTAAAAAGGCAAGGATAAACTTGCTCAACTTCTGGTACACGGCTCCGCCTCTGACTCCCTTGCAGAGTTTTGCTTCGTC
TTTCAATGAAGCTTGCAGTAGCCAGATTTGCTTGAAGGTACCCAGTCCAGCTCTTCGAGATGAGCTTCGTGTAAAGATCC
TTGAGTTTGTTAGTCGAGCGTACCATGAACACTTGGCAGGTCAGAGACAGTCTGCAGAACAAAATGCGAGGGAATTTGAG
TCGGAGTGGAAAACCAAAATTAGTGATTTGTTTGAAGGATGAAGTAGCAGTTTAATTTTCTGTCTGTGAGCGGAAGTGGA
TGAAGACCACAGTGCAAGTAGAGGCTTTGTATATTGTACCTATGTTGCTGCCCCTTGTGTTTGCGCCTGTATAATT----
----------------AAAGACATATGTTTGCTATGGAGGTACTATTTATATCTTTAACGTACATACTTAAGAACTTATA
TCTGTGTGACACGAATAAGGTTTCAGTCTTGGGACTTCGGGATGTCAAAATAGAAAATGCCGTCTCCCCTATATATTTTC
TTC-------CATCCAATC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATCCATTAGTAAATGCATCGAGGTATGGTATATTCAT
TCGTCCTTTACTTTGCTACTGTATTAATCACACAATGAACATAACTTTGCTGCCTCATGTGCTATGTTGGCTCTACTTGT
AC--------TTTCTTGCTTGGAGCTATTTCCTAGAGACATCCTCTCATGTTATCTTTATGGAATATATGTCATTCCCTC
CTGAACAAGAATGTGACAGTGAAAACGATGGAGATGAACAAGCAGACAAGGCCAGCTACCAA------------------
--------------------------------------------------------------------------------
----------CACAAAGAAACGTTCTTCGTACTTTCTGAGT-GGGGCATTCCAAGATCGAGACCAAGGATAGGGGAGCCG
GTGCTTCTTCGAGAAGACAAACACAGGCAAGGTACTAGCTTCCTGGCAACACGTAACTCATTGTTTTTACAGCAA-----
-------------------CGGCATAGGTTTTACAGTCAACCCGATTCTTGCTAGGTATGTTGTCCTCTTCTATCAGCTT
TTACTAAGAAAATTTGTACATGTTGATGCTATGAGATGCTAGAATTCGTTTTGCAACAAGACATGCCAATTGACCAACCA
GTAATCTTGTGATA----TATAAATCTAGTGTCATCTCTTCCTTCTTTTAAG---TATTGGTTGTGCGG-TGCATCTGAA
GACTCGAGGCAGATGATACCTGACCAAGTGAAACCAG-------------------------------------------
----------------------------------------------------------------------------AAAT
CCTGCCCTTCATTAGGACTTTCCACTTTGTCCTACTATGGCTGCACCATCCTAGAAGAAGCTTACCTCCACCAGTCTCTC
C
>chr3A_1
AAATAATGTGTATGTTGTACATAAATTGCTGGCATACTACAAGTTGTACTGAAATCCTTGTTTCCTCATTATCGTGTGCC
ATATAGTAGGAGTTGCCATTCTTTACTTGACATGAGACGTTTTTGTAATGTGGG---C---CTTCACCAAAATATTTGTC
CATTTCAGGAC-------CATAAGGTGTGATTCAACTCCATTGGGGGAGTGAAATAGGGGAATCACGGGGAAAGAATCAG
GGGTATCTTTTTGTTTTGTGGGAAAGAATTAGGGGTATCTGGTTGCCATATAAATCAAATTTGTACTTAATTGTACTTTT
TCCGTTCCAAACTACTCCCTCCATTCCAAATTACTTGTCGTGGTTTTAATTCAAATTTTTTACTGTTAGTTTTATATGAA
TATGGTGTGTAAAGGAGTCGGGAAATATTATGAAACCTATGCACGACAAACCTAATGAGTACAATTTCAACATAACCAAC
TAAAATTGTGTTACTAATTATTACTTTTCAAAGATAGAGAAGTTTGACTGCACATCTAAAGCATCATCCATTTTGGAATG
GAGCTTGTAGCAACT--------AAAAGTGTGTGTGAATACGCCGTTCTGTCTGTGTTAACAAGGATGATCATTGTACCC
GACGTACAGAACTAGACAGATATGATGCGTTGAGCATCAGAACTTTGGTTTTACCTCTCCTTATTGTCCCATTCAGATTA
GGAAATTTCCTTGAAGCTGACAGAAACTTGCCCTACACTCCTTCATAGAATCATTCCTTCAAAATCAGAATATGCTGTCC
AGATAAGCCCATTGTGGTTTGGAGTTATTCTTTGTTTCCTAGCGGCCTAAGAGAAACTTAACTCCATCTTTAAAACAATA
ATCTACCATTAACAGAGGGCATTGCGCATCTGTGCAGACAATAAACCACAGAACACAGACCATCTGGGG-ATTCTAAGTA
CAGGTGGAGCTAACATGTGCATGAATGTTGTTAATTAATGCACTAAAGGAAATAAATGACAGCAGCGCTCATGGATCTGG
CAACTGTACCTCGACCTGCAAGTGAGAAGGTACACCTGGCAGTGGGGGATGATGTTACGCAGTGTCGGCTTACTCTCCGA
TGGGCTTTGCACTTCATCCCACCACATATGTTGTTAGTTCTTGTCCACATCCACAGGCCAACTACCCCAAGTAAGAATTC
TCTTTTTTGTCTGCTTCTAGTTTGTCTGATGTTATGTAACCCCTTGATTCTAATGAATCACAAGTTGTCATGCTGCTTGG
AGAAAATTTACAGATATTTTTCACCTC-TTAACATTTTGTAGCTGTTTGTTTCAGCTGTATTGGGAGCTTCAGTGGCAGC
AAGCAAGTTGACAGAAGATCATGTTAGCGCGCACAGGATAAGTGAGAAAAACGTGATTGAGAAGAACTTAAAGGAGTGCT
TGCAAATGTGTAAGGTGAATGCTGAAACTGAAATGATTAGTCCGTGGCTGTGTTCTTTCATATACAATGCATTTTTTTTA
AGGAAAGAGCAGGGCACTGATATTGCGCATTTCTTCTAGGTCCAAGCAGAGATACTCATAATTGACAAAGATGATGTGAT
CGCTGGACTTGGGGAGGCAGTCAAAGACCAGAAGGTTACTACACTCGTTATGGGTGTCAAAAGAAGGTATATTACTACTT
ACATATGTTTCCTGGGTGCTGGTAGCAGCCTGGCGCAGTATTA--TATCGCCCCAACTTTCTAATGTATTTCATGTGACC
TCTGGGTTTTGATATAGAAAACATGGCTGGAAGAGCAAGACAGCAGATGCTTTGGAAAAACAAGCCGACTGTTTGTGCAA
TATTCTGTATCTTCATGAGGGAGTTCTCGTTGCCAGCAGGTACTGAACAAATCCTTAATCAACCTTGCATGTTCTTTTGG
GGTTTATATTTTAGACCATGAAGAGGAACTGCATGTCAATGCATTAAGATAGTAAACGAGTCGGAAC-AACCAAGAATGG
CCAAGCACTCAAAGGAACGATACGACTAAAGAAATAGAAACTGTACC----------GAAATAAAATAAAAACTGTACAA
GGCTAAGCCAAAACTCGCAACAGACCCTTTGCTCCCACCATGTACCAGAGCTT-GTATTCATCCTTGTCTCTGTCGATGA
GCTGCTCTACCAACATGGGCTCATTGTTGAAAACCCTGTTGTTACAGTCCTTCCAGATGAACCAAGGCACCAAAATAGTC
GTCGTGTCGAAGCCCCTCCTGCTCATTTTGGTGAAGGCCTGACGTGCAATGCAGAAGACCAAGCCAGGTCAAAACACCGT
GGTA--------GATGATACTGCTAGGTGGGAGGTTAGAACACAGTTGAACTGTTAGGCATCTATGAAAATCGACAAAAC
AAACTCACCCCCTTCCCTTTTGGTACCACTTCAAGCTTTTATAAATTTCCCTTGCCGGCATATATCCTGCCTATTAATAG
AAAAAAAAACTAAGTGCAGTTCCAGTAATCAATCACAAAATGATAAGTTTTTTTAATAC--ATAAAAGGAGACACAAGCA
TTCATTTGAAGTCCATTGTTTTATCACGTGGCAT--TTTTTTCCAGCATATCCCCTTTTCTCGGTTTTAAGGGAACATGA
TTGACTGTACTTTTTTTTCCTGCCAGAGTAAACGATTTTATTACAGTTCCCTAATAAAACATAAAATTTATTGTTACCCT
GACATGACAATC--------------------------------------------------------------------
------------------------TTGCTAGCTTCTATGATCTGTTCATCAACATTTATCTTAGCCTCTCGTTTATTTAC
AGGCATCAGCACACAGATAGGAAAATTGGCATGCCTTCTTTGGTAGGTTGCCACTTCTCAGGCAGTAATAGTAACACCAC
GAAATCCTCTTCTTTCTTCAACTCTCGAAGCACCGCCGACACCTTTGACACGGAGCATCTTGATGATCCTTCCTTAGTGA
TGAATTCAACCTATATATACCATGATTGTAGGTTCAACACTATAATTGGTCTCAAGTCATTTGACACTTTTAAGGAGCTA
GTAAAGCAGCAAATTTTAGCTGAGCACTCAAGGGACTTGTACCAGGCATTCAACATCAAATACTGTGATATCTTCACTGG
GTGCCAGTTAATTGGTGGCTTTGACTCACTCATTGGAGTAGATCCCCAACATTTAGGGGAGGAACATTGGAAATCCATCA
AGAGCTGGCCTGCAGTGTTGGAGTATATTGTCAGTGTTCTCAAGACATTGCAGATGCAGCTCCTCATGCAGAATCATCGT
GCACGCAACGGATTTACACATGATGACCTTTCAGAAGCAGTGAAAAAACCTATTAAGCGTCTGTTCACTGTTGCTTCAAT
TGTATCTGACCATGAGGTGCGGAAGTCACCAGAGAAGCTATTCTGTGTACTGAACATGCACACAGCACTCATAGATGCTG
CCCCCACTCTCAGGAAAGTCTTCTCTACAAAATCCATCAGAGAT------------GTTCTTCAAGAACTGGAGGACTCT
GTAAGGGGAATACTTAAAGAACTTAAAGGCTTAATTCATACATACAACTCACCAAAAGTAGTGCAGGATGGAGATATCCT
GCCGATATGTGGGTACCTCATGAGATACATCATGCTCCTAGTGAAGCATAAAGGTTCACTTGATAGGATTCTATCTCATG
ATTACACTGACAGTCTGTTGAAAGTTGAGGGAATGAGTTTGACAAGTGGTCTAGTGTCTGGGCTCATTACTGATCTAGAA
TCAGTAATTGATAAACATTCAAAGCAATGTGCTGCTTCTAAAGGACTCCAGTTCATATTCTTGATGAACAACATACATTT
CATACTTCAAGAAGTCAAGCAATCAGACGTACAGCTGACTGTAAAAGCCAAGTGGTTTGAGAAACGCCGATCCTTGATCA
AGGGGTACATAAAGAGTTACCTATCTGCATCATGGGGACCTGTTACGTCCACCTTGGAGGTTGCAAAAAGCATGCCTCCC
ACTAAAAAGGCAAGGATAAACTTGCTCAACTTCTGGTACACGGCTCCGCCAATGACTCCCTTGCAGAGTTTTGCTTCGTC
TTTCAATGAAGCTTGCAGTAGCCAGATTTGCTTGAAGGTACCTAGTCCAACTCTTCGAGATGAGCTTCGTGTAAAGATCC
TTGAGTTTGTTAGTCGAGCGTACCATGGACACTTGGCAAGTCAGAGACAGTCTGCAGAACAAAATGCGAGGGAATTTGAA
TCGGAGTGGAAAACCAAAATTAGTGAATTGTTTGAAGGATGAAGTAGCAGTTTAATTT-CTGTCTGTGAGCGGAAGTGGA
TGAAGACCACAGTGCAAGTAGAGGCTTTGTATATTGTACCTATGTTGCTGCCCCTTGTGTTTGTCCCTGTATAATT----
----------------AAAGACATATTTTTGCTATGGAGGTGCTATTTATATCTTTAACGTACATACTTAAGAACTTATA
TCTGTGTGACACGAATAAGGTTTCAGTCTTGGGACTTCGGGATGTCAAAATAG-AAATGCCGTCTCCCCTATATATTTGC
TTCACACTTCCATCCAATC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATCCACTAGTAAATGCATCGAGGCATGGTATCTTCAT
TCGT-CTTTACTTTGTTACTGTATTAATCATACGATGAACACAACTTTGCTGCCTCATGTGCTATGTTGGCTCTTCTTGT
AC--------TTTCTTGCTTGGAGCTATTTCCTAAAGACATCCTTTCCTGTTATCTTTATGAAATATATGTCATTCCCTC
CTGAATAAGAATGTGACAGCGAAAACGATGGAGATGAACAAGCAGACAAGGCCAGCTACCAATAACCG---CTACAACAA
TTTGTTTGCGGACCATATTTCTTTCAGGTGAATTTGCTGCCATATTCTTCTGGAAGGAGCGGGGAGTGTGTGCCGCTCCA
GGCAACAAAACACAAAGAAACGTTCTCGGTACTTTCTGAGTGGGGGCATTCCAAGATCGAGACCAAGGATAGGGGAGCCG
GTGCTTCTTCGAGAAGACAAAGACAGACAAGGTACTAGCTTCCTGGCAACATGTAACACATTGTTTTTACAGCACGCGAC
ATAGTTTTAACAGTCAACCCGACATAGTTTTTACAGTCAACCCGATTTTTCCTAGGTATGTCGTTCTCTTCTATCAGCTT
TTACTAAGCAAATTTTTACATGTTGATACTATGAGATGCTAGAATTCGT-TTGCAACAAGACACGCCAATTAACCAACCA
ATAATCTTCCGATATACTTATAAATCTAGTGTCCTCTCTTCCTTTTTTAAGTATATATTGGTTGTGTGATTGCATCTGAA
GACTCGAGGCAGATGATACCT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr3D_1
AAATAATGTGTGTGCTCTACATAAATTGCTGGCATACTACAAGTTGTACAGAAATCCTTGTTTCCTCATTATCGTGTGCC
ATATTGTAGGAGTTGCCATTCTTTACTTGACTTGAGACGTTTTTGTAATGTGCGCATC---CTTCGCCAAAATATTTGTC
CATTTCAGGAGTCAGGATCATAAGGTGTGATTGAACTCAATTGGGG-ACTGAATTAGGCGAATCACAGGGAAAGAATTAA
GGGTATCTTTTTGTTTCGTGGGAAAGAATTAGGGGTATCTTGTTGCCATGTAAATCAAACTTGTACTTAGTTGTATCCTT
TCTATTCCAAACTAGATGCCATTTTGTTTTTTTCATGGCCACTTTTAC----------------------TTTATATGAA
TACGGTGTGTAAAGGAGTCGGGAAA-ATTATGAAACCTATGCACGGCAAACCTA--------------AACATAACCAAC
TAAAATTGTGTTACTAATTATTACTTTTCAAAGATAGAGAAGTTTGACTGCACACCTAAAGCATCATCCATTTTGGAATG
GAGCTAGTAGTAGTAGTAACTAAAAAAGTGTTTGTGAATACGCCGTTCTGTCTGTGTTAACAAGGATGATCATTGTACCC
GACGTACAGAACTAGACAGATATGATGCGTTGAGCATCAGAACTTTGGTTTTACCTCTCCTTATTGTCCCATTCAGATTC
GGAAATTTCCTTGAAGCTGACAGAAACTTGCCCTACACTCCTTCATAGAATCATTCCTTCAAATGG-GAATATGCTGTCC
AGATAAG-CCATTGTGGTTTGGAGTTATTCTTTGTTTCCTAGTGACCTAAGAGAAATTTAACTGCATCTTTAAAACAATA
ATCTACCATCAACAGAAGGCATTGCGCATCTGTGCACACAATAAACCACAGAATGATCATTTGGGGGAGG---CTAAGTA
CAGGTGGAGCTAACATGTGCATGAATGCTGTTAATTAATGCACTAAAGGAAATAAAGGACATCTGAGCTCATGGATCTGG
CAACTGTACCTCGACCTGCAAGTGAGAAGGTACACCTGGCAGTGGGGGATGATGCTAAGCAGTGTTGGCTTACTCTCCGA
TGGGCTTTGCACTTCATCCCACCACAGATGTTGTTAGTTCTTGTCCACATCCACAGGCCAACTACCCCAAGTAAGAATTC
TCTTTTT-GTCTGCTTCTAGTTTGTCCGATGTTATGTAACTCCTTGATTCTAATGAATCACAAGTAGTCATGCTGCTTGG
AGAAAATTTACAGATATTTTTCACCTCTTTAACATTTTGTAGCTGTTTGTTTCAGCCGTATTGGGAGCTTCAGTGGCAGC
AAGCAAGTTGACAGAAGATCATGTTCGTGCGCACAGGATAAGTGAGAAAAACGTGATTGAGAAGAACTTAAAGGAGTGCT
TGCAAATGTATAAGGTGAATGCTGAAACTGAAATGATTAGTCCGTGGCTGTGTTCTTTTGTACACAATTCA-TTTTTTTA
AGGAAAGAGTAGGGCACTGATATTGTGCATTTCTTTTAGGTCCAAGCAGATATACTCATAATTGACAAAGATGATGTGGT
CGTTGGACTTGGGGAGGTAGTCAAAGACCAGAAGGTTACCACACTCGTTATGGGTGTTAAAAGAAGGTATATTACTACTT
ACAGTATTAA--------------------------------A--TATCGCACCAAGTTTCTAATGTATTTCATGTGATC
TCTGGGTTTTGATGTAGAAAACATGGCTGGAAGAGCAAGACAGCAGATGCTTTGGAAAAACAAGCCGACTGTTTGTGCAA
TATTCTGTATCTTCATGAGGGAATTCTCGTTGCCAGCAGGTACTGAACAAATCCTTAATCAACCTTGCATGTTCTTTTGG
GGTTTATATTTTAGACCATGAAGAGGAACTGCATGTCAATGCATTAAGATAGTAAACGAATCGGAAC-AACCAAGAATGG
CCAAGCACTCAAAGGAACGATACGACTAAAGAAACAGAAACTGTAC----------TGAAATAAAATAAAAACTGTACAA
GGCTAAGCCAAAACTCGCAACAGACCCTTTGCTCCCACCATGTACCAGAGCTT-GTATTCATCCTTGTCTCTGTCGATGA
GCTGCTCTACCAACATGGGCTCATTGTTGAAAACCCTGTTGTTACAGTCCTTCCAGATGAACCAAGGCACCAAAATAGTC
GTCGTGTCGAAGCCCCTCCTGCTCATTTTGGTGAAGGCCTGACGTGCAATGCAGAAGACCAAGCCAGGTCAAAACACCGT
GGTA--------GATGATACTGCTTGGTGGGAGGTTAGAACACAGTTGAACTGTTAGGCATCTATGACAATCGACAAAAC
AAATTTACCTCCTTCCCTTTTGGTACCACTTCAAGCTTTTATAAATTTCCCTTGCCGGCATATATTCTGCCTATTAATAG
AAAAAAAT--TAAGTGCAGTTCCAGTAATCAATCACAAAATGGTAGAGTTCTTTTTTTGATATAAAAGGAGACACGAGCA
TTCATTTGAAGTCCATTGTTTTATCACGTGGCAT--TTTTTTCCAGCATATCCCCTTTTCTCGGTTGTAAGGGAACATGA
TTGACTGTACTTTTTTT--CTGCCAGAGTAAACAATTTTATTACAGTTCCCTAATAAAACATAAAATTTATTGTTACCCT
GACATGACAATC--------------------------------------------------------------------
------------------------TTGCTAGCTTCTGTGATCTGTTCATCAGCATTTTCCTTACACTCTTGTTTATTTAC
AGGCATCAGCACACAGACAGAAAAATTGGCATGCCTTCTTTGGTAGGTTGCCACTTCTCAGGCAGTAATAGTAACACCAC
GAAATCCTCTTCTTTCTTCAACTCTCGAAGCACCGCCGACACCTTTGACATGGAGCATCTTGATGACCCTTCCCTAGTGA
TGAATTCAACCTATATATACAATGATTGTAGGTTCAACGCTATAATTGGTCTCAAGTCATTTCACACTTTCAGGGAGCTA
GTAAACCAGCAAATTTTAGCTGAGCACTCAAGGGACTTGTACCAGGCATTCAACATCAAATACTGTGACATCTTCAGTGG
GTGCCAGTTAATTGGTGGCTTTGACTCACTCATTGGAGTAGATCCCCAAGATTTAGGGGAGGCACATTGGAAATACATCA
AGAGCTGGCCTGCGGTGTTGGAGTATATTGTCAGTGTTCTCAAGACACTGCAGATGCAACTTCTCAAGCAAAATCATCGC
GCATGCAATGGATTTACACATCATGAACTTTCAGAAGCAGCAAAAGAACCTATTAGGCGTCTGTTGACTGTTGCTTCAAT
TGTATCTGACCATGGGGTCAGGAAGTCGCCTGAGAAGCTATTCTGTGTATTGAACATGTACACTGCACTCATGGATGCTA
CCCCCACTCTCAGGGAAGTCTTCTGTACAGAATCTATCGCTGGGGATGTTGAGGTGGTTCATGGAGAACTGAAGGACTCT
GCAAGGGGAATAGTTACAGAACTTAAAGGCTTGATTCAGACTTACAACTCACCGAAAGTAGTGCATGATGGAGGTATCCT
GCCGATATCTGTGTACCTCATGAGATACATCAGGCTCCTAGTGAAGCATAAAGGTTCGCTTGATATGATTGTAGGTCATG
ATCACACTGATGGTCTACTGAAAGTTGAGGGAATGAGCTTGACAAGTCGTCTTGTATCTGGGCTCATCACTGATCTGGAA
TCTGTAATTGATAGACAATCCAGGCAATTTT---CTTGTAAAGGACTCCAGTACATATTCTTGATGAACAACATACATTT
CATACTTCAAGAAGTCGAGCAATCAGATGTTCATCTGACTGTAAAAGCCA---GGTTTGAGAAACGCCGACCCTCCATCA
AGTGGTACATAAATAGTTACCTATTTGCATCATGGGGACCATTTGCATCCACCTTGAGGGTTGCAAAAAACGCGCTTCCC
AGGAAAAAGGCAAGGATAAACT---TCAATTTCTGGTACAAAGCTCCGCCTTTGACTCCCTTGCAGAGTTTTGTCTTGTC
TCTCAATGAAGCTTGCAATGAGCAGATGTGCTGGAAGGTACCCAGTCCAGCTCTTCGAGATGAGCTTCGCAAAAGGATCC
TGAAGTTTGTTACTCGAGTCTACCGTGGACATTTGGCAAGTCAGAGACAGTCTGCAGAACAAAATGTGAGGGAATTTCAC
TTGGAGTGGAAAACCAAAATTGATGAATTGTTTGAAGGATGAAATAGCAGTTTAATTT-CTGTCTGTGAACGGAAGTGGA
TGAAGACCACAGTGCAAGTAGAGGCTTTGTATATTGTACCTATGTTGCTGTCCCTTGTGTTTGCCCCTGTAAATGATAAG
CTGAATCAGCTTAATAAAAGATATATTTGTGCTATGGAGGTGGTATTTATATCTTATACATACTGAGGA-------TAAA
TCTGTGTGACATGAATAAGGTTTCAGTCTTCGGACTTCGGGATATCAAAATAGAAAATGCCTTTGGTTTCATTTCTATGA
AATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCATTAGTAAATGCATCGAGGTATGATATCTTCAT
TTGTCCTTTACTTTGTTACTGTATTAATCATACAC-GAACACAACTTTGCTGATTCATGTGTTATGTTGGCTCTACATGT
ATTTTCTATTTTTCTTGCTTGGAGCTATTTCCTAGAGACATTCTCTCATGTTATCTTTATGGAA--TATGTCATTCCCTC
CTGAACAAGAATGTGACAGCGAAAACTATGGAGATGAACAAGCAGACAAGGCCAGCTACCAATAACTGATACTACAGCAA
TTTGTTTGCAGACCATACTTCTGTCAGATGAATTTGCAGCTATATTCTTCTGGAAGGAACGGGTAGTGTGTGCCACACCA
GGCAACAAAACACGAAGAAACATT----GTAGTTTCTGAGTGGGGGCATTCCAAGATTGAGACCAAGGACAGGAAAGCCG
GTGCTTCTTAGGGAACACAAAGACATGCAAGGTACTAGCTTCCTGGCAACACGTAACTCATTGTTTTTACAGCACGCGGC
ATAGTTTTTACAGTCA------------------------CCCGATTCTTGCTAGGTATGTCGTTCTCTTCTATCAGTTT
TTACCAAGAAAATTTGTACATGTTGATGCTATGAGATGCTAGAGTTGGT-TTGCAACAAGACACGCCAATTGACCAACCA
ATAATCTCCTGATG----TATAAATCTAGTGTCCTCTCTTCCTTTTTTAAGTAT----TGGTTGTGCGATTGCATCTGAA
GACTCGAGGCAGATGATACCTGACCAATTTACTACTCCCTCCGTTCGGAATTACTCGTCCAAGAAATGAATGTATCTAGA
TGTATTTTACTTGTAGATACATCCATTTTTGTGACAAGTAATTCCGAACGGAGGGAGTAGTACACAAGTAAAACCAAAAT
CCTGCCCTTCATTAGGACTGCCCACTTTGTCCTACTATGGCTGCACCATCCTAGAAGAAGCTTACCTCCACCAGTCTCTC
C
>SNPs
--------------------------------------------------------------------------------
----------------------------------------------------------SSS-------------------
------S-------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------SS----SS-S---SSS-S-S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
----------------------------S----------------------------------------S----S-----
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
---S-----------------------S-S-----------------S----S----S------------S----S----
----S---------------------------------------SS---S----------------------S-------
-----S-------S----------------------------S-------------------------------------
------------------------------------------------------S-------------------------
------------------SS-----------------------SS-------S------S------S-------------
--------------------------------------------------------------S--------S--------
----------------S----------S-----S-----------S-------------------------------S--
S-S-----------------S----S------------------------------------S----S------------
--------S-------------------------------------SSSSSSSSSS------------------------
--------------------------S--------------------S-----S--------------------------
------------------------------------------------------------------SS-----------S
-------------------------------------------S-------------------S----------------
----SSSSSSSS----S------S-----------------------------------S--------------------
---------------------------------------S-S---S--S---------------------S---------
--------------------------------S----S-------SS--------S------------------------
----------------------------------SS-------------------S------------------------
--------------------------------S----S------------------------------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------------
--------------------------------S-----------------------------------------------
----------------------------------S-------------------S-------------------------
-------------------------------S-----S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-----------------S--------------------------------S---------------------S-------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
---------------------------S----------S----------------------------------------S
--------------------------S-------------------------------S---------------------
----------------------------------------------------------------S---------------
--------------------------S--------------S--------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------S--------------S----------S--------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------SS----------------------------------------------------
---------------------S----------------------------------------------------S-----
---------------------S-----S---------------------------------S--S---------------
-------------------------------------------------S-------------S----------------
S-------S------------------------S----------S---S-SS----------------S-----------
---------------------------S-S-SSS-SS-------------------------------------------
--------------------------------------------------------------------------------
-------------------SS-----------------------------------------------------------
-
>forward_364
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TGGCTTTTCATGGTCAGTGC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>reverse_2304
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------TCAGGTCAAAACACCGT
GGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>forward_2128
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------TTGCTCCCACCATGTACCAC--------------------------------
--------------------------------------------------------------------------------
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>reverse_2995
--------------------------------------------------------------------------------
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----------------------------------ACCGACACCTTTGACACGG---------------------------
--------------------------------------------------------------------------------
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>forward_2785
--------------------------------------------------------------------------------
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---------------------------------------------TAGCCTGCCCCAACTTGTTT---------------
--------------------------------------------------------------------------------
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>reverse_4379
--------------------------------------------------------------------------------
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----------------------------------------------------------TCTGTCTGTGAGCGGAAGTG--
--------------------------------------------------------------------------------
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-
