>input_sequence_21544
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-------------------------------------------------------------ATGGCGAGCGGAGCCGTCG
CGCCGCCGCCACCGCCGCTGGCCGGCGGGCGGCGCGGCTTCGGCGGCCGGGGAGTCCTCCTCCGCCGGCGCCTCGCCGCC
ACGCCGATGTGAGCACCCTTTATCCGCTTCCTATCATCCTATGTTCGCGGTCGGTTTGGTCGCCGGGTCCGTGGACTGCT
TACACTGGTAGC---TTTTCTTGGTCGAGGAACGAGGGATTTCGTCTTCTTACTTCTCAGTCGCTGATTGCAGCAAA---
----------CTGCTTGAATAGGGAGGAATTTAGGATCGGATTCGCGCCC------------------------------
--------------------------------------------------------------------------TTATTT
GTGGAATTGTTGTTGGCTAATTCACCAATTATTACCGGTTTATTCGCCCGCATTTTGC--TAAGTTTATTCCCAAGCGAA
GAAGATAAA-ATACTTCTCTGTTGTTCTACTAGAAATCCAAAAATGCTGCGGACTGTAGGATGATTTTTTTTCGTGGATG
CAGAACTGCGCAGTACTTTGAAAACATCTCATTACTTATCATGTGGTTGTGATTCTTGTGAAGGGAGATACTCGCCGTAT
GACTAGAACACAATTTTATCTGGATTAGGTTTCTGAATCTTGTGATTTCCTCTTGCTTTGAAAGCATAGATATGTAA---
-------AAAAGCAACGCCACACTTACATTTTATTGTATCCATGTTGTGCATTATTTTCATGCAAAATCAGTTTTCTTCT
TTCAGGAAAGATGAGCCCGTGATTTCTACAACCGGCGGAAAAGAGGAAATGATTGCTCATAGTGTTAATGTTGCCAGAAA
AGCATCCATCCCTGGTGTCTCATCAAACATATCCAATAGGACACCGGTGACA---CCAACACCTTTGCAACCACCAGAAC
CATCCGATCTCCGTTTCAATCGTCTTCGACCCTCGATTGAGAAAAGTGATTGCAAATACACAAGATATTTCGGTCGCTAT
GTTGCTCGGGAGGCTATAATGGATGAGGAATACTGGGTATTATTCTTGTTACTTGTAGAAAATATGCAATCGCTGATTTT
GTGCAATAACTTAAAGTCCTCCACTTCTGAGTGACATGGTCAGCGCATGTGTTTATGATGAGTTAGTGACAATAATTAAT
AAGCTACCTGTCTTTTGTTTCTCATGCTAATAAGCTCAGTGCATGAGATCTATAGATACTAATATTTACATTCCAAATCA
TGAACCGTAACAATTTAGTTGGTGCTATGAAGTAACGAAATAAAATTTACATTACCACTATGCCTTACATCTCTTCTTAC
CAAGACCTTATAGATCGCCGCATGGTTGAGAGCAGAAGATCACTATGAAGATCAGTCAGGCGATCGGTTAGTATTTAAAT
TACAGTGTTGATGAACTTTTTGTTAG------------------------------------------------------
--------------------------------------TAATATCCTTGTAACTAAAACCTATTCTACTGTTGTTTTCTC
ACTGCAGCTATGTTGAAAGCTTTAAAAGAAAGTTTGCATCACAGGTACGTGTGTAATCAGTTAGTCATATTTTGGGGTTA
CTC-AGGCAATTGGGATGGTAATGATGTCGACACGTGCCCA-TTTCCACCAGCTGATCATTTAATAGTTGACGTTCTGCT
TCACTTGTAGCCGTATATCATT--CTTGTAATATATCAAATGTATCATCGTCGGTCATCTCACTGCAGGAATTTCATGCT
TTAAAGAAGCGATGTGGCAGGCAGGTTGGAGAGAAGTATACCTGTTTTGTTGCGGTATGAGAGTAAAGCTGTTTGTAAGC
CATTTATTAATGCATTTTTAAATCAAGCATGTTAGTTCACGAAATAGAAGGGGAGCCTTGGCGCAGTGGTAAAGCTGCTG
CCCTGTGACCATGAGGTCATGGGTTCAAGTCCTGGAAACAGCCTCTTACAGAAATGTAGGGAAAGGCTGCGTACTATAGA
CCCAAAGTGGTCGGACCCTTCCCTGGACCCTGCGCAAGCGGGAGCTACATGCACCAGGTTGCCCTTTTTTTTTTTTAGTT
CACGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTTATGCTAGTTCTG
AAATATGCTTTGAGGGAATCAAGACAAGCGAAAGTGGCTACCCAACAACCTTCAAGTTAAAACTTCAGTTTC----TGTT
AGAGATCTTTTGTGAAAATTATTTAGGTCTACATTGTCAATCACTCTTAAAAGTTGCTTTGATGATAATTTCCTTTATTT
CACTCTTAAAATTATTTAGGCCTTTTTTTTTTAGTTCACGAAATAGCATGTTATGCTAGTTCTGAAATATGCTTTGAGGG
AATCAAGACAAGCGAAAGTGGCTACCCAACAACCTTCAAGTTAAAACTTCAGTTTCTGTTAGAGATCTTTTGTGAAAATT
ATTTAGGTCTACATTGTCAATCACTCTTAAAAGTTGCTTTGATGATAATTTCCTTTATTTCACGGTTAATTAACATCTCG
TCTACGGTAATAATATTGCAGGTAAAGAATGATGACGTCACACGAACTGTGGTGAATAGTGTTGTTGGTACAGTAGATCT
ATGTGTTAGGCATCCTCTACATGGGGAGACATACCCTGCGGTATGGAAAATAGCACCAATACCTTTGTATTACTCCTATC
TGTGTCTTTAGAAGTTACATTTGGAAATTATTCGCAGGAGCCTGGAAACACACCATTTTACTCTAGAATCTATCAGCCAG
ATCAGCCAAAATTTGGATATTTAACCAATGTTTGTGTTGCTAAGTATGCACGGCGTCAAGGGATTGCCAGCAACATGTTG
TTATTGGCCATCGATGCTGCAAGACTCGATGGTAAAGCATTAGGCTTGTCTGGAATTGTAAAACCACAGATAATACTAGT
TCATCTGCTGATACCTTCTCCCCTTGTTGCAGGTGCTGAAAGCATTTATATTCATGTACATAAGGATAACTTGCCAGCTC
GGAGGCTCTATGATCATGTAGGATTCAAGGTATATACAATTTTCTTTTCAAAAAAAAAATTGCATTCTTCCATTTAGTTA
TAGAGCTCTAAGTTGAATTGCTCTTATGTTGGTTATTTGTAGATGGTTGACATGGATGGTGCTCGCCAGTCATCAGATCT
GTGCTTACTCTCCTTCAATTCTATGCACTAGGCTAGTTAACAGGGGATTTATTCCCATATCCTTTGTGCAGGTGAAAGTA
TGCCATCAGTCCTCTTGA--------------------------------------------------------------
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>chr4A_1_TraesCS4A01G011900
CTCAATACATGGGGGGCCACTTCCAAGCCACACAGTTGTGGCTCGCTCTGAACGACTATACCCTGCCAGACAATCTGCAA
CTCTATTTTGAGTTCTATGTAGCTTCTGTGAAATAAACTCTCTACCGACCATTAAAGACTTGATCTCAGCAACTAAATGA
CCATAAACCGAACTAATCAAACTTGACCCGGAGAGACAAGAAAGAGCAGTCGAAGAGTCAGGTTGCACCAGAATAGGTAA
CTCGGTATGCTGACGGACGAGCGCCATGCCGATCATTAACACATGTATCTCCGCCTCAAGAGCCTCATTGCAGTTAAACA
AGAACCGATAAGCAGCAAAAACAACCGATCCATCATGTCTCCGGAGTATAAATCCTGCCGCCGCCGTTCCATCCGCCTCC
ATAAAAGATCCATCCGCTGAAAGAGCTAACATGTTATATGGAGGTGGTGGGCACTACAATATCTCTCCTCTGCTCCCATA
AGTCATTAAACATGCATGTTTCCTTTGATCATTTCTTCCATTGCCGTGCTTTTCTCCCTAGCACATGTGCTACAAACCTA
CAATGGCAACCACAAGAATAATGCAATGAATGAATAGATGCACTATCATTATTTGTAAACAAAATCAAAATGCCCTATAT
AGCCAATCATGTAGTCACTCACA-AGTCACGCGGTAGAGCTGCGGGGCCACGGCGCCGAGACGTGGGCGCTTCCTGCGCA
CGAAACAAGCTGTAGGCGGCGGCCATCCACCGGAAAATAGATCCCAATCCATCAAACCGGACGCGTCAGGCCCACAGAAA
--------CGGATAGAGCGGTCCTACTT-CTA--------CTAGCAGAGAGCCGAAGGCAGCGA--GGGGGAAGCAGCCG
CGAGGTTGGTGGTGCGGTGCCCGG-TAGACCACGGCGCACGCCAACCCCGGACCCCGCCGCGCCCAGCATTTCCCCTCGC
CGCGCCGCCGAGGAGTACCTCCACCCCCCGCCCCCTTGGACCGGGCGCTAGCAAGTCCGGGATGGCGAGCGGAGCCGTCG
CGCCGCCGCCACCGCCGCTGGCCGGCGGGCGGCGCGGCTTCGGCGGCCGGGGAGTCCTCCTCCGCCGGCGCCTCGCCGCC
ACGCCGATGTGAGCACCCTTTATCCGCTTCCTATCATCCTATGTTCGCGGTCGGTTTGGTCGCCGGGTCCGTGGACTGCT
TACACTGGTAGC---TTTTCTTGGTCGAGGAACGAGGGATTTCGTCTTCTTACTTCTCAGTCGCTGATTGCAGCAAA---
----------CTGCTTGAATAGGGAGGAATTTAGGATCGGATTCGCGCCC------------------------------
--------------------------------------------------------------------------TTATTT
GTGGAATTGTTGTTGGCTAATTCACCAATTATTACCGGTTTATTCGCCCGCATTTTGC--TAAGTTTATTCCCAAGCGAA
GAAGATAAA-ATACTTCTCTGTTGTTCTACTAGAAATCCAAAAATGCTGCGGACTGTAGGATGATTTTTTTTCGTGGATG
CAGAACTGCGCAGTACTTTGAAAACATCTCATTACTTATCATGTGGTTGTGATTCTTGTGAAGGGAGATACTCGCCGTAT
GACTAGAACACAATTTTATCTGGATTAGGTTTCTGAATCTTGTGATTTCCTCTTGCTTTGAAAGCATAGATATGTAA---
-------AAAAGCAACGCCACACTTACATTTTATTGTATCCATGTTGTGCATTATTTTCATGCAAAATCAGTTTTCTTCT
TTCAGGAAAGATGAGCCCGTGATTTCTACAACCGGCGGAAAAGAGGAAATGATTGCTCATAGTGTTAATGTTGCCAGAAA
AGCATCCATCCCTGGTGTCTCATCAAACATATCCAATAGGACACCGGTGACA---CCAACACCTTTGCAACCACCAGAAC
CATCCGATCTCCGTTTCAATCGTCTTCGACCCTCGATTGAGAAAAGTGATTGCAAATACACAAGATATTTCGGTCGCTAT
GTTGCTCGGGAGGCTATAATGGATGAGGAATACTGGGTATTATTCTTGTTACTTGTAGAAAATATGCAATCGCTGATTTT
GTGCAATAACTTAAAGTCCTCCACTTCTGAGTGACATGGTCAGCGCATGTGTTTATGATGAGTTAGTGACAATAATTAAT
AAGCTACCTGTCTTTTGTTTCTCATGCTAATAAGCTCAGTGCATGAGATCTATAGATACTAATATTTACATTCCAAATCA
TGAACCGTAACAATTTAGTTGGTGCTATGAAGTAACGAAATAAAATTTACATTACCACTATGCCTTACATCTCTTCTTAC
CAAGACCTTATAGATCGCCGCATGGTTGAGAGCAGAAGATCACTATGAAGATCAGTCAGGCGATCGGTTAGTATTTAAAT
TACAGTGTTGATGAACTTTTTGTTAG------------------------------------------------------
--------------------------------------TAATATCCTTGTAACTAAAACCTATTCTACTGTTGTTTTCTC
ACTGCAGCTATGTTGAAAGCTTTAAAAGAAAGTTTGCATCACAGGTACGTGTGTAATCAGTTAGTCATATTTTGGGGTTA
CTC-AGGCAATTGGGATGGTAATGATGTCGACACGTGCCCA-TTTCCACCAGCTGATCATTTAATAGTTGACGTTCTGCT
TCACTTGTAGCCGTATATCATT--CTTGTAATATATCAAATGTATCATCGTCGGTCATCTCACTGCAGGAATTTCATGCT
TTAAAGAAGCGATGTGGCAGGCAGGTTGGAGAGAAGTATACCTGTTTTGTTGCGGTATGAGAGTAAAGCTGTTTGTAAGC
CATTTATTAATGCATTTTTAAATCAAGCATGTTAGTTCACGAAATAGAAGGGGAGCCTTGGCGCAGTGGTAAAGCTGCTG
CCCTGTGACCATGAGGTCATGGGTTCAAGTCCTGGAAACAGCCTCTTACAGAAATGTAGGGAAAGGCTGCGTACTATAGA
CCCAAAGTGGTCGGACCCTTCCCTGGACCCTGCGCAAGCGGGAGCTACATGCACCAGGTTGCCCTTTTTTTTTTTTAGTT
CACGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTTATGCTAGTTCTG
AAATATGCTTTGAGGGAATCAAGACAAGCGAAAGTGGCTACCCAACAACCTTCAAGTTAAAACTTCAGTTTC----TGTT
AGAGATCTTTTGTGAAAATTATTTAGGTCTACATTGTCAATCACTCTTAAAAGTTGCTTTGATGATAATTTCCTTTATTT
CACTCTTAAAATTATTTAGGCCTTTTTTTTTTAGTTCACGAAATAGCATGTTATGCTAGTTCTGAAATATGCTTTGAGGG
AATCAAGACAAGCGAAAGTGGCTACCCAACAACCTTCAAGTTAAAACTTCAGTTTCTGTTAGAGATCTTTTGTGAAAATT
ATTTAGGTCTACATTGTCAATCACTCTTAAAAGTTGCTTTGATGATAATTTCCTTTATTTCACGGTTAATTAACATCTCG
TCTACGGTAATAATATTGCAGGTAAAGAATGATGACGTCACACGAACTGTGGTGAATAGTGTTGTTGGTACAGTAGATCT
ATGTGTTAGGCATCCTCTACATGGGGAGACATACCCTGCGGTATGGAAAATAGCACCAATACCTTTGTATTACTCCTATC
TGTGTCTTTAGAAGTTACATTTGGAAATTATTCGCAGGAGCCTGGAAACACACCATTTTACTCTAGAATCTATCAGCCAG
ATCAGCCAAAATTTGGATATTTAACCAATGTTTGTGTTGCTAAGTATGCACGGCGTCAAGGGATTGCCAGCAACATGTTG
TTATTGGCCATCGATGCTGCAAGACTCGATGGTAAAGCATTAGGCTTGTCTGGAATTGTAAAACCACAGATAATACTAGT
TCATCTGCTGATACCTTCTCCCCTTGTTGCAGGTGCTGAAAGCATTTATATTCATGTACATAAGGATAACTTGCCAGCTC
GGAGGCTCTATGATCATGTAGGATTCAAGGTATATACAATTTTCTTTTCAAAAAAAAAATTGCATTCTTCCATTTAGTTA
TAGAGCTCTAAGTTGAATTGCTCTTATGTTGGTTATTTGTAGATGGTTGACATGGATGGTGCTCGCCAGTCATCAGATCT
GTGCTTACTCTCCTTCAATTCTATGCACTAGGCTAGTTAACAGGGGATTTATTCCCATATCCTTTGTGCAGGTGAAAGTA
TGCCATCAGTCCTCTTGATTTAGAAAAAGCAGGACGGTGTCGGTGAATATGTTTTACCATCTTGCACATGATAAAAGCTT
GTAAAGTTCAAAATCCTTGGAATCGTCTACATGGGACGACAGTACCAGTGTCCAGAATGCTGTTGATGTGTGTGTGGGCT
TTTCATCTGAATGCTTCGGTTTTTTTTATTATTATTACTGTACAGTTTGTGAAGCAAGCCCATTTCATGGCTCTGGGTTC
ATTCTTGTGAGTCTTCAAGAAAAAATGTACATCCATGCTACTCCCTTCGTTCACTTTTTTAAGTCATTTCAGACAGCTCA
AAATGGGCTGTTTTGTACATTGTCTGAAATGTCTTCAAGGTCTAATAAAAGTGAACAGAGAGAGTAACAAACATCTGTAA
TAAGAACTGTGATTAAGTTCCTTCGGCCATAGTTGGACCCGGCCTTTTAGTTTT-----TGAGTCTACAATTCTATGTTC
GGCTAGTGCC-----GACCGAACGGGCCAACTGGGGCAAGGTGCACAGCCTGATTATAGATTAAAAACACCTGAAGATCA
TAATTTTTTG----------GTAATAATAATAATAATAACTTGCATGAGCCAAAT-----------------------CT
GTAATAAGCTAAACCCTCACAACTGTAACATGATTGCTTTGC-------------------------------ATAAAAT
CATTTGTTATTTATCTTTTGATCCGCTAA-AATGGAAAACATGGAAAATTCAGTTATGAAAATAAAATCCCTAAATTGGA
AAAAGTACAAGTTGGGGTTATATTCATGGATCATTCGCATTCATGTCATATGCATATACACATGTATATTCTGCTATTCT
CTCTGGACTGTCCTTATCCAACCACTCGATGTTCTAACAAGTTCACTTCTGAAACCTTGAGTGAAACTTG-AAGTCCATT
TCTTTGTTTATGTTGATATATCAATATGGCTTTGAACCAAAACCTGTGCTCATCAGTTCGTGAAACC-GAACAAGTTCAG
ACCGGATCCCGTTCCGTGCTGAAAGTTTGAGCAATGCTGGGCTCTAACAAAGGCA
>chr4A_1
CTCAATACATGGGGGGCCACTTCCAAGCCACACAGTTGTGGCTCGCTCTGAACGACTATACCCTGCCAGACAATCTGCAA
CTCTATTTTGAGTTCTATGTAGCTTCTGTGAAATAAACTCTCTACCGACCATTAAAGACTTGATCTCAGCAACTAAATGA
CCATAAACCGAACTAATCAAACTTGACCCGGAGAGACAAGAAAGAGCAGTCGAAGAGTCAGGTTGCACCAGAATAGGTAA
CTCGGTATGCTGACGGACGAGCGCCATGCCGATCATTAACACATGTATCTCCGCCTCAAGAGCCTCATTGCAGTTAAACA
AGAACCGATAAGCAGCAAAAACAACCGATCCATCATGTCTCCGGAGTATAAATCCTGCCGCCGCCGTTCCATCCGCCTCC
ATAAAAGATCCATCCGCTGAAAGAGCTAACATGTTATATGGAGGTGGTGGGCACTACAATATCTCTCCTCTGCTCCCATA
AGTCATTAAACATGCATGTTTCCTTTGATCATTTCTTCCATTGCCGTGCTTTTCTCCCTAGCACATGTGCTACAAACCTA
CAATGGCAACCACAAGAATAATGCAATGAATGAATAGATGCACTATCATTATTTGTAAACAAAATCAAAATGCCCTATAT
AGCCAATCATGTAGTCACTCACA-AGTCACGCGGTAGAGCTGCGGGGCCACGGCGCCGAGACGTGGGCGCTTCCTGCGCA
CGAAACAAGCTGTAGGCGGCGGCCATCCACCGGAAAATAGATCCCAATCCATCAAACCGGACGCGTCA------------
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>chr4D_544
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---------------------------------------------------------------CATGTGCTACAAACCTA
CAATGGCAACCACAAGGATAATGCAATGAATGAATAGATGCACTATCATTATTTGTAAACAAAATCAAAATGCTCTATAT
AGCCAATCATGTAGTCACTCACA-AGTCACACGGTAGAGCTGCGGGGCCACGGCGCCGAGACGTGGGCGCTTCCTGCGCA
CGAAACAAGCTGTAGGCGGCGGCCATCCACTGGAAAATAGATCCCAATCCAGCAAACCGGACGCGTCAGGCCCACAGAAA
GAGTGAAACGGATAGAGCAGAACAACTG-CTACTAGCACTCTAGCAGAGAGCCCAAGGCAGAGAGGGGGGGAAGCAGCCG
CGAGGTTGGTGGTGCGGTGCCCGGGTAGACCACGGCGCACGCCAA-CCCGGACCCCGCCGCGCCCAGCATTTCCCCTCGC
CGCGCCGCCGAGGAGTACCTCCACCCCCCGCCCCCTTGGACCAGGCGCTAGCAAGTCCGGGATGGCGAGCGGAGCCGTCG
CGCCGCCGCCGCCGCCGCTGGCCGGCGGGCGGCGCGGCTTCGGTGGCCGGGGAGTCCTCCTCCGCCGGCGCCTCGCCGCC
ACGCCGATGTGAGCACCCTTTATCCGGTTCCT--------ATGTTCGCGGCCGGTTTGGTCGCCGGGTCCGTGGACTGCT
GG-ACTGGTAGTACTTTTTCTTGTTCGAGGAATGAGGGATTTCGTGTTCTTACTTCTTAGTCGCTGATTGCAGCAAAGGA
AGGGACATGCCTGCTTGAATAGGGAGGAATTTAGGATCGGATTCGCACCC------------------------------
--------------------------------------------------------------------------TTATTT
GTGGAATTGTTGTTGGCTAATTTACCAATTATTACTGGTTTATTCGCCAGCATTTTGCTATAAGTTTATTCCCAAGCGAA
GAAGATAAATATACTTCTCTGTTGTTCTACTAGAAATCAAAAAATGCTGCGAACTGTAGGATGG--TTTTTTCGTGGATG
CAGAACTGCACAGTACTTTGAAAACGTCTCATTACTTATCATGTGGTTGTGATTCTTGTGAAGGGAAATACTCGCCGTAG
GACTAGAACACAATTTTATCTGGATTAGGTTTCTGAATCTTGTGATTTCTTCTTGCTTCGAAAGCATAGATATGTAA---
-------AAAAGCAACACCATACTTACATTTTATTTTATCCATGTTGTGCATTATTTTCATGCAAAATCAGTTTTCTTCT
TTCAGGAAAGATGAGCCCGTGATTTCTACAAACAGCGGAAAAGAGGAAATGATTGCTCATAGTGTTAATGTTGCCAGAAA
AGCATCCATCCCTAGTGTCTCATCAAACATATCCAATAGGACACCAGTGACA---CCAACACCTTTGCATCCAGCAGAAC
CATCCGATCTCCGTTTCAATCGTCTTCGACCCTCGATTGAGAAAAGTGATTGCAAATACACAAGATATTTCGGTCGCTAT
GTTGCTCGGGAGGCTATAATGGATGAGGAATACTGGGTATTATTCTTGTTACTTGTAGAAAATATGCAATCGCTGATTTT
GTGCAATAACTTAAAGTCCTCCACTTCTGAGTGACATGGTCAGCACATGTGTTTATGATGAGTTAGTGACAATAATTAAT
AAGCTACCTGTCTTTTGTTTCTCATGCTAATAAGCTCAGTGCATGAGATCTATAGATACTAATGTTTACATTCCAAATCA
TGAACTGTAACAATTTAGTTGGTGCTATGAAGTAACGAAATAAAATTTACATTACCAATATGCCTTACATCTCTTCTTAC
CAAGACTTTATAGATCGCCGCATGGTTGAGAGCAGAAGATCACTATGAAGATCAGTCAGGCGATCGGTTAGTATTTAAAT
TACAGTGTTGATGAACTTTTTGTTAG------------------------------------------------------
--------------------------------------TAATATCCTTGTAACTAAAACCTATTCTACTGTTGTTTTCTC
ACTGCAGCTATGTTGAAAGCTTTAAAAGAAAGTTTGCATCACAGGTACCTGTGTAATCAGTTAGTCATATTTTTGGGTTA
CTC-AGGCAAGTGGGATGGTAATGATGTCGACACGTGCCCA-TTTCCACCAGCTGATCATTTAATAGTTGACGTTCTGCT
TCACTTGTAGCCGTATATCATT--CTTGTAATATGTCAAATGTATCATCGCCAGTCATCTCACTGCAGGAATTTCATGCT
TTAAAGAAGCGATGTGGCAGGCAGGTTGGAGAGAAGTATACCTGTTTTGTTGCGGTATGAGAGTAAAGCTGTTTGTAAGC
CATTTATTAATGCATTTTTAAATCAAGCATGTTAGTTCACGAAATAG---------------------------------
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--------------------------------------------------------------CATGTTATGCTAGTTCTG
AAATATGCTTTGAGGGAATCAAGACAAGCGAAAGTGGCTACCCAACAACCTTCAAGTTAAAACTTCAGTTTC----TGTT
AGAGATCTTTTGTGAAAATTATTTAGGTCTACATTGTCAATCACTCTTAAAAGTTGCTTTGATGAT--------------
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----------------------------------------------AATTTCCTTTATTTCACGGTTAATTAACATCTCG
CCTACGGTAATAATATTGCAGGTAAAGAATGATGACGTCACACGAACTGTGGTGAATAGTGTTGTTGGTACAGTAGATCT
ATGTGTCAGGCATCCTCTACATGGGGAGACATACCCTGCGGTATGGAAAATAGCACCAATTCCTTTGTATTACTCCTGTC
TGTGTCTTTGGAAGTTACATTTGGAAATTATTCGCAGGAGCCTGGAAACACACCATTTTACTCTAGAATCTATCAGCCAG
ATCAGCCAAAATTTGGATATTTAACCAATGTTTGTGTTGCTAAGTATGCACGGCGTCAAGGGATTGCCAGCAACATGTTG
TTATTGGCCATCGATGCTGCAAGACTCGATGGTAAAGCATTAGGCTTGTCTGGAATTGTAAAACCACAGATAATAGTAGT
TCATCTGCTGATACCTTCGCCCCTTATTGTAGGTGCTGAAAGTATTTATATTCATGTACATAAGGATAACTTGCCAGCTC
GGAGGCTCTATGATCATGTAGGATTCAAGGTATATATAATTTTCTTTTCAAAAAAATTAT--CATTTTTCCATTTAGTTA
TAAAGCTCTAAGTTGAATTGCTCTTATGTTGGTTATTTGTAGATGGTTGACATGGATGGTGCTCGTCAGTCATCAGATCT
GTGCTTACTCTCCTTCAATTCTATGCACTAGGCTAGTTAACAGGGGATTTATTCCCATATCCTTTGTGCAGGTGAAAGTA
TGCCATCAGTCCTCTTGATTTAGAAAAAGCAGGACGGTGTCGGTGAATATGTTTTACCATCTTGCACATGATAAAAGCTT
GTAAAGTTCAAAATCCTTGGAATCGTCTACATGGAGCGACAGTACCGGTGTCCAGAATGCTGTTGATGTGTGTGTGGGCT
TTTCATCTGAATGCTTCGTTTTTTTT-------ATTACTGTACAGTTTGTGAAGCAAGCCCATTTGATGGCTCTGGGTTC
ATTCTTGTGAGTCTTGAAGAAAAAATGTACATCCATGC------------------------------------------
----------------------------------------------------------------TAACAAACATCTGTAA
TAAGAACTGTGATTAAGTTCCTTCGGCCATAGTTGGACCCGGCCTTTTAGTTTT-----TGAGTCTACAATTCTATGTTC
GGCAGCCGACCTG--------ACAGGCCAACTGGGGCAAGGTGCACAGCCCGATTATAGATTAAAAACATCTGAAGATCA
TAATTTTTTG----------ATAATAATAATAATTTCCTTCCAAAACTCAGTAGATTATTGCTATAGTTAGTTTTAGCCT
GAAATAAGCTAAACCCTCACAACTGTAACATGATTGCTTTGC-------------------------------ATAAAAT
CTTTTGTTATTTATCTTTTGATCCACTAAGAATGGAAAACATGGAAAATTCAGTTATGAAAATAGAATCCCTAAACTGGA
AAAAGTACAAGTTGGGGTTATATTCATGGATCATTCGCATTCATGTCATATGCATATACACATGTATATTCTGCTATTCT
CTCTGGACTGTCCTTATCCGACCACTCGATGTTTTGACAAGTTCACTTCTGAAACCTTGAGTGAAACTTGGAAGTCCATT
TCTTTGTTTATGTTGATATATCAATATGGCTTTGAACCAAAACCTGCGCTCATCAGTTCGTGAAACCA-AACAAGTTCAG
ACCGGATCCCGTTCTGTGCTAAAAGTTTGAGCAATGCTGGGCTCTAACAAAGGCA
>chr4B_564
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---TGGCAGCCACAAGGATAATGCGATGAATGAATAGACGCACTATAATTATTTGTAAACAAAAT------GCCCTATAT
GGCGAATCATGTGGTCACTCACACAGTCACGCGGTAGAGCTGCGGGGCCACGGCGCCGAGACGTGGGCGCTTGGTGCGCA
CGAAACAAGCTGTAGGCGGCGGCCATCCACCGGAAAAAAGATCCCAATCCAGCAAACCGGACGCGTCAGGCCCACAGAAA
AAGGGACACGGATAGAGGGAGCAGAACAACTA--------CTAGCAGAGAGCTGAAGGCAGAGA--GGGGGAAGCAGCCG
CGAGGTTGGTGGTGCGGTGCCCGGGTAGACC---------GCCAA-CCCGGACCCCGCCGCGCCCAGCATTTCCCCTCGC
CGCGCCGCCGGAGAGCACCTCCACCCCCTGCCCCCTTGGACCAGGAGCTAGCAAGTCCGGGATGGCGAGCGGAGCCGTCG
C---GCCGCCGCCGCCGCTGGCCGGCGGGCGGCGCGGCTTCGGTGGCCGGGGAGTCCTCCTCCGCCGGCGCCTCGCCGCC
ACGCCGATGTGAGCAGCCTTTATCCACTTCCT--------ATGTTTGCGGTCGGTTTGGTCGCCGGGTCCGTGGACTGCT
AG-ACTGGTAGC---TTTTCTTGTTCGAGGAGCGAGGGATTTCGTGTTCTTAGC-------CGCTCGTTGCAGCAAAGGC
AGGGACATGCCTGCTTGAATAGGGATCAAGTAGATCAAAAGGATTTGAGAGCTTCGTTGGACACTGATTGCCTGTTGCAA
GATGTAATTATTCATCAATTCCTGACCCGGAAGGGTAGTCAGATAGTTCAGTTTAGGATCTATGATTCACATTATTATTT
GTTGAATTCTTGTGGGCTAATTTACCGAT---------------CGCCAACTTTTTGCTAC-AATTTCATTCAAAGCGGA
GAAGATAAAGATACTGATATGTTGTTCT----GGAAAACAACAATGCTGCAAAGTGTTTTTGCTC----------GGATG
CAGAACTGCACAGTACTTTGAAAACATATCATTACTTGTCGTGTAATTGTGAAGCTG---------AATACTCGCGGTAC
GACTAGAACCCAATTTTACCCGGATTAGGTTTCTGAATCTCGTGGTCTTTTCTTGCTTTGTAAGCATAGAACTAGCATGG
ATATGTGAAAGGTCACATCACGCTTACATTTTGC-----CCATGTCGTGCATTATTTTCATGCAAAATCAGTTTT-TTCT
TTCAGGAAAGATGAACCCGTGGTCTCTACAAACGGTGGAAAAGAGGAAATGATTGCCCATAGTGTTAATGTTGCCAGAAA
AGCATCCATTCCTGGAGTTTCATCAAGTTTATCCAATAGGACAACAGTGACGACGCCAACACCTTTGCATCCAGCAGAAC
CATCTGATCTCCGTTTCAATCGTCTTCGACCCCCTATTGAGAAAAGTGATTGCAAATACACAAGATATTTTGGTCGCTAT
GTTGCTCGGGAGGCTATAATGGATGAGGAATACTGGGTATTATTCTTGTTACTTGCAAAAAATATACATTCGCTGATTCT
GGGCAATAACTTATAGTCGTCCATTTCTGATTGACATGGTCGGCACATGTGTTTATGATGAGTTAGTGACAATAATTAAT
AGGCTACCTGTCTTTTGTTTCTCATGCTAATAAGCTCAGAGCATGAGATCTGTAAATACTAACATTTATATTCCAAATCA
TTTACCTTCACAATTTAGTTAGTGCTATGAAGTAACGAAATAACATTTACATTACCACTATGCCTTACATCTCTTCTTAC
CAAGACTTTATAGATTGCCGCATGGTTGAGAGCAGAAGATCATTATGAAGATCAGTCAGGCGATCGGTTAGTATCTAAAT
TACAGTGCTGGTGCACTTTTTGTTACTCCCTCCGTAAACTAATATAAGAGTGTTTAGAATACTAAAGTAGTGATCTAAAC
GCTCTTATATTAGTTATTTAGTTTACAGAGGGAGTAGTTAATATCCTTGTAACTAAAATCTATTGTACTGTTGTTTTCTC
ACTGCAGCTATGTTGAAAGCTTCAAAAGAAAGTTTGCATCACAGGTACGTGTGTAATCAGTTAGTCATATTTTTGTGTTA
CTAGAGGCAAGTGGGATGGTAATGATGTCGACACGTGCACATTTTCCACCAGCTGATCATTTAAAAGTTGAC--------
--ACTTGTAGCCGTGTATCATTTTCTTGCAATATGTCAAATGTATCATCGTCAGTCATCTCACTGCAGGAATTTCATGCT
TTAAAGAAACGATGTAGCAGGCAGGTTGGAGAGAAGTATACCTGTTTTGTTGCGGTATGAGAGTAAAGCTATTTGTAACC
CATTTATTACTGCATTTTGTGTAAGCATGTT---GTTCATGAAATAG---------------------------------
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--------------------------------------------------------------TATGTTATGCTAGTTCTG
AGATATGCTTTGAGGGAAGACAC----GCGAAAATGGCTACCCAACAACGGACAAGTTAAAACTTCACTTTTCTGTTGTT
AGAGATCTTTTAAACAAAAA--TTAGGTCTACATTTTCAATCACTTTTAAATGTTGCTTTGATTATATTTTCCTTA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TATTTCACGGTTAATTAACATCTTG
CCCACGGTAAT-ATATTGCAGGTAAAGAATGATGACGTTACACGAACTGTGCTGAATAGTGTTGTTGGTACGGTAGATCT
ATGTGTCAGGCATCCTCTATATGGGGAGACATATCCCGCGGTATGGAAAATAGCACCAATATCTTTGTATTACTCCTGCC
TGTGTCTTTGGAAGTTACGTTTTGAAATTATTCACAGGAGCCTGGAAACACGCCATTTTACTCTAGAATCTATCAGCCAG
ATCAGCCAAAATTTGGATATTTAACCAATGTTTGTGTTGCTAAGTATGCACGGCGTCAAGGGATTGCCAGCAACATGTTG
TTATTGGCCATTGATGCTGCAAGACTCGATGGTAAAGCATTAGGCTTGTCTGGAATTGTAAAACCACAGATAATAGTAGT
TCATCCGCTGATACCTTCGCCCCTTATTGTAGGTGCTGAAAGTATTTATATTCATGTACATAAGGATAACTTGCCAGCTC
GGAGGCTCTATGATCATGTAGGATTCAAGGTATATATGATTTTCATTTCAAAAGAGGTA-TGCATTTTTCCATTTAGTTA
TAGAGCTCTAAGTTGAATTGCTCTTATGTTGGTTATTTGTAGATGGTTGACATGGATGGTGCTCGCCAGTCATCAGATCT
GTGCTTACTCTCCTTCAGTTCCACCCACTAGGCTAGTTAACAGGGGATTTATTCCCATATCCTTTGTGCAGGTGAAAGTA
TGCCATCAGTCCTCTTGATTTAGAAAAAGCAGGACGGTGTCAGTGAATATGTTTTACCATCTTGCACATGATAAAAGATT
GTAAAGTTCAAAATCCTTGGAATCGTCTACATGGG-CGACAGTAGGGGTGTCCAGAATGCTGTTGATGTATGTGTGGGCT
TTTCATCTGAATGCTTCGTTCTTTTG--------TTACTGTACAGTTTGTGAAACAAGCCCATCTGATGGCTCTGGGTTC
ATTCTTGTGAGTCTTCAAGAACAAATGTACATCCATGC------------------------------------------
----------------------------------------------------------------CAACAAACATTCGTAA
TAAGATCTGTGATTAAGCTCCTTTGGCCATAGTTGGGTCGGGCCTTTTAGTTTTTTGACTGAGTCTACAATTCTATGTTT
GGCTAGGGCTGTTTGGATCGAACAGGCCAACTGGGCCAAGGTGCACAGCCCGATTT--GATTAAAAACATCTGAACATCA
TAAATTTTCAATACTAATAAATAATAATCATATTTTCCTTCCAAAACTCAGAAACTTATTGTTATAGTTAGTTTTAGCAT
GAAATAAGTTAAACCCTCACCAGTGTAACATAATTGCTTTGCATATGCATTTGTTGTATGTAGATGATACAAAATAAAAT
CATTTGTCATTTATCTTTTGATCTGCCAAGAATGGAAATCATGGAAAACTCAATTATGAAATAAAACCCCTAAAC-TGGA
AAAGGTACAAGTTGGGGTTATATCCATGGATCATTCGTGTC----------------------GTATATTCTGCTATTCT
ATCTGGACTGTCCTTATCCAACTGCTCGATTTTCTGACAAGGTCACTTCTGAAATCTTGAGTTAAACTTG-AGGTCCATT
TGTTTGTTGATGTTGGTATATCAATATGGCTTTGAACCAAAACCTGTGCTCATCGGTTCATGAAACCGGAACAAGTTCAG
ACCAGATCCCTTCCCGTGCTGAAAGTTTGAGCACTGCTGGGCTCTAACAAAGGCA
>SNPs
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--------------------S--S---S---------------------------------S------------------
---------------------------------------------S----------------------------------
------------------------------------------S-------------------------------------
----------S--------------------------------S------------------------------------
--------------------------------SSSSSSSS----------------------------------------
SSS--------------------S---------------------S-----------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S------------S------------S-------------------------------
---------------------------------------------------S-----------SSS--------------
---------S--------------------------------------------------------S------------S
-------------------------------------------------S------------------------------
----------------S------------------S--------------------------------------------
-------------------------------S------------------------------------------------
---------------------------------------------S-----------------------S---S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
----------S---------------------------------------------------------------------
----------------------------------S-----------------S---------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------
S-------------------------------------------------------------------------------
------S----------------------------------------------------------------------S--
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------------------S------S---S------------S-------------------------------------
------------------------------------S-------------------SS--------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S----------S---------------------------------
------------------S-------SSSSSSS--------------------------------S--------------
--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
--------------------------------------------------------------------------------
------S----------S-----S--------------------------S------------------S----------
--------------------S-------------SSSSSSSSSS-SSSSSS---S-------------------------
-S------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_824
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----GAAACGGATAGAGCGGTCCT--------------------------------------------------------
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-------------------------------------------------------
>reverse_1994
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-------------------------------------------------------------------------CCAGAAC
CATCCGATCTCCG-------------------------------------------------------------------
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-------------------------------------------------------
>forward_1585
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------GCTGCGGACTGTAGGATGAT---------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_3690
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---------AAGCGAAAGTGGCTACCCAA---------------------------------------------------
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-------------------------------------------------------
>forward_2205
--------------------------------------------------------------------------------
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-------------------------TCTGAGTGACATGGTCAGCG-----------------------------------
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-------------------------------------------------------
>reverse_3691
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----------AGCGAAAGTGGCTACCCAAC--------------------------------------------------
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-------------------------------------------------------
>forward_3114
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------------------------------------------------------TGTAGGGAAAGGCTGCGTAC------
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-------------------------------------------------------
>reverse_4676
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-----------------------------------ACGACAGTACCAGTGTCCAG-------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
