>input_sequence_21421
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----------------------------------------ATGGAAGCCATCGCGGAAGAGCTTGGTGTTTCTGTCGAGG
TCCTGCTGCGGGGCCTTCCGCCGCGCCTCCGGCACGCCGCGGATGGCGTCATCCTGCGCCAGTTCGCGCGGCTGGGCTGC
CGCGCCGACTACCTTCGAGTCCGCGACCCGGAGACCCCGGATCTGATGCGGCTTCTCCACACCTTCACGCGCGTACGGGG
CCATGTGCCCTACATGCCTCTGTGGGATGCATCGAACATCTATCATGCTTTGCTGGAGGAAGGAGGACCGGCGACTTCGC
ACCATCGCCAGGTCATCATCACGAACCCCGACGTCCTGCTCGCCAAGTACCGCTCCTATCGCGCTATCGTTGAGCAGATG
GACCTGCTAGACTCTGTGAGCCAGTCTGTCGAGGAGGTGCTGACCTTGCGTCTGCAAGCACAGTTCGAGGCTTGTGTCGC
AGATCTGCGGTCAACCAAGGCAAATCTGCAGCAGCATGCCCGGCGTCTAGTGCTCCTCTATCTTCGCCAAGGTATGCACG
CACGATCGGCGACTCAGCCATAATTACTCCATCAGTAATGATACCACCATTTCTCAGTGATCAATGCAAATTTAAGCCTG
AAAATCTGGATTAGTGTTTCCTGGGTATTTGATCTTTTGTGGATGAGATGATGAGATGCGATGCCAGTTACATTTTGGTG
TCTTATGGTTTCCATTCTTGCTGTCATACTATCATGTTATTGATCCAATGGTGGTGCCATCAGAAGACACGGATTTGTTT
CCATGAGTACTTTATTACTTCGAAAGTGTCAGCCAACAAGTGTATGTCTACATGCCCATCGTAATTCTGTCAATCTTTTG
GTTATGCATTGATTGCTTTGATGTGGTATGTGTGTGTTAATACTTAATGCAGTTGCTTGGTTATATTAAGGTGTTCAATT
CATTATGTTTAATACATTAGCATGGTTACAATAAGCTTTCAGTTCATTAGCTTGCTTACAATAAACTTCTAATTAATT--
AGTGTTCTGGTGGATTATTATCAAATTCGGATATGCA-CATCAAACTGTATCTGGATTGCCAGTTTCAATCTATTTATAG
TTGACGTAGTTACC------TTCTTGATAATGGCA-------GATTGCTGGCGTAGAGCATAATGCTGCTCTTTTGTTTG
TCTTGCAAATCCTTCAGG-GCATTAGTAAATCCTTCTAGTGGAGATCATTCAGCAGGTTCAGCAAGATTTTTCAAATGGG
CCTTCTAGTGCCTTAGTAAATTGTGTAGCCGACAAGTTTGGTTGTTATTGTCAGTG-TTTACAGGTTTTGTTTGATTGCA
AGTGAAGTTGGTTTGGTTTGGTTTGATTTTCTACATTTCTCTCTAGTTCGGACTGCTAACTGCACTTCAAATGTTTGGTT
GCAAAGAGCTCCTGGCATGGCTAAGAAATTGGTTAGACTCCATTGTGTGCACCGAAATAGTCGCTCCCTAGAATGTACCC
TAGGACATGCCGTATGCTTATATCTTTATTGAAGATATTTTGTATTCAGGTGACATTTTGGAAGCCAAGCATTATCTGCA
GATATGCTTTCCCAGGGTGTCCCAGCGTATTGATAATAATCCAGCTAGGGCCTTTGAAGCTTATCAACTTCTTCTCACAA
CTCTCCAGGATGAATTTGTTGGTAAATAACTAATTATTCATTTGCACTAC--------------------TTCTGTTCAA
ACTAATTGAGTGTACCAAATTGAAGAATTATTACCCCTTTTATGTGCCATAGGTGAAGAACTAGAGCTGGCATCCCAGAT
GGAAAAATTTTGTGGCTTCGTTGGCATGTTATAGGCTGTTATACTTGAAGGCTACAAACCTTGCGTTTATCATTTCTTTG
GTTCAGTGTTTCGCAGCAGATATCGTAAAGAAGAGGGATTACCTCCTGGGCTGACTCAGAGTGCGAACACTGATAGGCGC
CGCACCTCTAAACTAAGGTAAATTGTACTAATTTCATGACCTTCACAGCTTTCAGCTCTCTGAGTCGTTCAACTTATCCC
ACTGATACCTTTGTGCAAAAATAAACAAACAGAATCAG----------------TTACATATCAAGGAAGAAACAAATTA
GTGCAAAAAGTACACTAGTACTCTGTCCGTTTGTTTAAGACATCATTAACACTTGTGTCATTGCAAGAGATGTGCAGCTG
CTCTGTAGTATTTTCATTATTTCCTTAATAATTTGCATTTAAATTTAGCAGTTGCACTACCGTATTCACCCAAGCAAATG
TAGTACTCCCTCCATTCCGTAACAGTGTGTGTGTGAGTTTTTTTTTCTTCCAGAATTTCATATTAGAATGTGTACTCCCT
ATTACATTTTCCCAATGCTAACACTTCACAGATGAGAACAGTTTCCTCCTCCTTTAATTACTGCTACCCTTTTTACCATA
TTAAATACTGCTACCCTTTTTACCATAGTAATTACTGCTCATCATACCAGTGCATGTGCACGCTTGCACGGATTACC---
--------------------------------------CTTGTCTAGCGTGTAGCACATGCATGTTGGAGAGAAAACGGG
ATTTACTGGTCGCGGTTGTTTCAAGGAGCCTGGGTGTGGCGTGCAAGTGAATT-ACAAAGTTGATTGTGTAAGCAATTAG
GGACTAAACTGGAAGGAAT-CCCCTGCGCTACCCCTCCTCAGCAAGTT-TCTAAAATGCACTCTATTATATTATGAAAAG
GAGGGAGCAAC-TCCAAACAGGTCTAGTAGGATCATGGGTTTGCAAACTGCTTCGTTCGACACACACTAGTACCCCTCCT
TGGTATTATCAAGGACTAACCTTGGGACATACACTAGTACTCTGTACGTTTGTTCAATACATCATCAATCCAAGTGTCGC
TGCAAGATATGTGCAACTGCTTTGGCAGGATCATGAGTTTGTAGCTGAAGCTCCTCATTCATGAGTTCCACTACTTCCAG
TTGCCATAATGCATTAACTGCCCTAAGGATTGAAGTATAGTATACAGATTTAGCTTTGAGGCAATTGGATCGAGCATAGC
TTCACTAGTTCACTAGATACTATATCTATTTCACAACAGTAAA-------------------------------------
-------CCAAAATTAGAACATACTCCCAAAGTAGGAAGTGAGAGGTACCTGCCTTGCTGGAGCTTTGTCGCCTCACCGG
AATGTTGCCCCTGT-CCTGGCTTGCGTGAGAGGGAAAGGGGGTGGTGGCTGTATAGGGGAGGGAGGAGGCTGTTTGAAAT
TTGATTGAAATCTGTAAGATGGCTATTGATATGTCTTATACATCTTTTGCAGTTATC--TGATGGAAGTCCAAGTTCAAT
TCATTTTACCATATTTGAGAA-TGAACTCAGATAGCCTTCCTCAGTTGCAGTTGCCACCTGTTACTGTTGTATTCTGA--
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-------------------------------------------
>chr3A_1_TraesCS3A01G386600
GATACAAGGGCCGCATTGCATAAAATGCCCAACCGCCGTCCGAGGAAAGCTCCCGCCTGGGCCCTCTTGTCCACGTGGCA
GCGATCAAAGCGCCACGCAGGATAGTCGGCGATGGTCAGTCGGAATTAGGACCTCGGATGAACTACTTAAAAAAGAATTA
GGACCCCAAACATGCATTTTGAAAGAATTAGGACTCAATCGACACTTTAGTGAAAGAATTAGGACCGTGCATGCATTTTA
CTCTTTGGAAAAAGAGGATGAACTAGAGTTTTTCCAAATCAAAAAATTCCAATAAAAACGGAGAAAGGGAGGAGAATACC
TTGAAAATTGAAAGGGAAGAAAATCCACCATTTTTAAGCTCTGATCGACAAGTTTTGGCGACTGATTTGGAAGGGGGGAG
AGAGGGGGAGGATGAATTGAGAAGAAGAATCATAGCCATCTAGCTCGGGCATGAGGCGTCACGCTCGGACCTAGGGGTTT
TCTCCATCAACTCCGCCCAAGCCGCTCCAACATGGCAGGTGAGCGCTGACCCATGGCGCCCTTGATCAGGGCGTCATTGA
AATGTGCCATTTTATGAAATATTTCAATCGGGTTTATTTTTTGTAAAAACTTTTTGAAAAGGGTCATTTTTGTGTTTTTT
CATGTTCTTTTTACTACACTGCCGCCCCATGAGAAGCTCGTCAAAGGCGGGAATATGAAATGACATCCCCAGCCGAACTG
CCTTCCCTCGCCGTACCACCCCCTTCCTTCCTCTCCCTTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCACCCCATCCCAAATCGCAATTCCGGCCGGTGGATTGCGATGGAAGCCATCGCGGAAGAGCTTGGTGTTTCTGTCGAGG
TCCTGCTGCGGGGCCTTCCGCCGCGCCTCCGGCACGCCGCGGATGGCGTCATCCTGCGCCAGTTCGCGCGGCTGGGCTGC
CGCGCCGACTACCTTCGAGTCCGCGACCCGGAGACCCCGGATCTGATGCGGCTTCTCCACACCTTCACGCGCGTACGGGG
CCATGTGCCCTACATGCCTCTGTGGGATGCATCGAACATCTATCATGCTTTGCTGGAGGAAGGAGGACCGGCGACTTCGC
ACCATCGCCAGGTCATCATCACGAACCCCGACGTCCTGCTCGCCAAGTACCGCTCCTATCGCGCTATCGTTGAGCAGATG
GACCTGCTAGACTCTGTGAGCCAGTCTGTCGAGGAGGTGCTGACCTTGCGTCTGCAAGCACAGTTCGAGGCTTGTGTCGC
AGATCTGCGGTCAACCAAGGCAAATCTGCAGCAGCATGCCCGGCGTCTAGTGCTCCTCTATCTTCGCCAAGGTATGCACG
CACGATCGGCGACTCAGCCATAATTACTCCATCAGTAATGATACCACCATTTCTCAGTGATCAATGCAAATTTAAGCCTG
AAAATCTGGATTAGTGTTTCCTGGGTATTTGATCTTTTGTGGATGAGATGATGAGATGCGATGCCAGTTACATTTTGGTG
TCTTATGGTTTCCATTCTTGCTGTCATACTATCATGTTATTGATCCAATGGTGGTGCCATCAGAAGACACGGATTTGTTT
CCATGAGTACTTTATTACTTCGAAAGTGTCAGCCAACAAGTGTATGTCTACATGCCCATCGTAATTCTGTCAATCTTTTG
GTTATGCATTGATTGCTTTGATGTGGTATGTGTGTGTTAATACTTAATGCAGTTGCTTGGTTATATTAAGGTGTTCAATT
CATTATGTTTAATACATTAGCATGGTTACAATAAGCTTTCAGTTCATTAGCTTGCTTACAATAAACTTCTAATTAATT--
AGTGTTCTGGTGGATTATTATCAAATTCGGATATGCA-CATCAAACTGTATCTGGATTGCCAGTTTCAATCTATTTATAG
TTGACGTAGTTACC------TTCTTGATAATGGCA-------GATTGCTGGCGTAGAGCATAATGCTGCTCTTTTGTTTG
TCTTGCAAATCCTTCAGG-GCATTAGTAAATCCTTCTAGTGGAGATCATTCAGCAGGTTCAGCAAGATTTTTCAAATGGG
CCTTCTAGTGCCTTAGTAAATTGTGTAGCCGACAAGTTTGGTTGTTATTGTCAGTG-TTTACAGGTTTTGTTTGATTGCA
AGTGAAGTTGGTTTGGTTTGGTTTGATTTTCTACATTTCTCTCTAGTTCGGACTGCTAACTGCACTTCAAATGTTTGGTT
GCAAAGAGCTCCTGGCATGGCTAAGAAATTGGTTAGACTCCATTGTGTGCACCGAAATAGTCGCTCCCTAGAATGTACCC
TAGGACATGCCGTATGCTTATATCTTTATTGAAGATATTTTGTATTCAGGTGACATTTTGGAAGCCAAGCATTATCTGCA
GATATGCTTTCCCAGGGTGTCCCAGCGTATTGATAATAATCCAGCTAGGGCCTTTGAAGCTTATCAACTTCTTCTCACAA
CTCTCCAGGATGAATTTGTTGGTAAATAACTAATTATTCATTTGCACTAC--------------------TTCTGTTCAA
ACTAATTGAGTGTACCAAATTGAAGAATTATTACCCCTTTTATGTGCCATAGGTGAAGAACTAGAGCTGGCATCCCAGAT
GGAAAAATTTTGTGGCTTCGTTGGCATGTTATAGGCTGTTATACTTGAAGGCTACAAACCTTGCGTTTATCATTTCTTTG
GTTCAGTGTTTCGCAGCAGATATCGTAAAGAAGAGGGATTACCTCCTGGGCTGACTCAGAGTGCGAACACTGATAGGCGC
CGCACCTCTAAACTAAGGTAAATTGTACTAATTTCATGACCTTCACAGCTTTCAGCTCTCTGAGTCGTTCAACTTATCCC
ACTGATACCTTTGTGCAAAAATAAACAAACAGAATCAG----------------TTACATATCAAGGAAGAAACAAATTA
GTGCAAAAAGTACACTAGTACTCTGTCCGTTTGTTTAAGACATCATTAACACTTGTGTCATTGCAAGAGATGTGCAGCTG
CTCTGTAGTATTTTCATTATTTCCTTAATAATTTGCATTTAAATTTAGCAGTTGCACTACCGTATTCACCCAAGCAAATG
TAGTACTCCCTCCATTCCGTAACAGTGTGTGTGTGAGTTTTTTTTTCTTCCAGAATTTCATATTAGAATGTGTACTCCCT
ATTACATTTTCCCAATGCTAACACTTCACAGATGAGAACAGTTTCCTCCTCCTTTAATTACTGCTACCCTTTTTACCATA
TTAAATACTGCTACCCTTTTTACCATAGTAATTACTGCTCATCATACCAGTGCATGTGCACGCTTGCACGGATTACC---
--------------------------------------CTTGTCTAGCGTGTAGCACATGCATGTTGGAGAGAAAACGGG
ATTTACTGGTCGCGGTTGTTTCAAGGAGCCTGGGTGTGGCGTGCAAGTGAATT-ACAAAGTTGATTGTGTAAGCAATTAG
GGACTAAACTGGAAGGAAT-CCCCTGCGCTACCCCTCCTCAGCAAGTT-TCTAAAATGCACTCTATTATATTATGAAAAG
GAGGGAGCAAC-TCCAAACAGGTCTAGTAGGATCATGGGTTTGCAAACTGCTTCGTTCGACACACACTAGTACCCCTCCT
TGGTATTATCAAGGACTAACCTTGGGACATACACTAGTACTCTGTACGTTTGTTCAATACATCATCAATCCAAGTGTCGC
TGCAAGATATGTGCAACTGCTTTGGCAGGATCATGAGTTTGTAGCTGAAGCTCCTCATTCATGAGTTCCACTACTTCCAG
TTGCCATAATGCATTAACTGCCCTAAGGATTGAAGTATAGTATACAGATTTAGCTTTGAGGCAATTGGATCGAGCATAGC
TTCACTAGTTCACTAGATACTATATCTATTTCACAACAGTAAA-------------------------------------
-------CCAAAATTAGAACATACTCCCAAAGTAGGAAGTGAGAGGTACCTGCCTTGCTGGAGCTTTGTCGCCTCACCGG
AATGTTGCCCCTGT-CCTGGCTTGCGTGAGAGGGAAAGGGGGTGGTGGCTGTATAGGGGAGGGAGGAGGCTGTTTGAAAT
TTGATTGAAATCTGTAAGATGGCTATTGATATGTCTTATACATCTTTTGCAGTTATC--TGATGGAAGTCCAAGTTCAAT
TCATTTTACCATATTTGAGAA-TGAACTCAGATAGCCTTCCTCAGTTGCAGTTGCCACCTGTTACTGTTGTATTCTGATA
CTGTGTTTTGTGTTGTAGACTCACGTCGCGCAGGCACT-----TTCTATCAGAAGGATACTAGGAGAGCGAAG-------
----------------------------------------AAGTAAACCTCTGCAAATTACTGTTTACTGGAAAAGTCAG
GAAGAAATGATTGGTCAACAAACTTGTATATAAGCTCTGAGGTTGCTGCATGTGCAGCCGGAGTCTCTTTTTTACTTGTT
ATCATTGCTTCATTTCGTTCATAGGGATCACAACTGAGAAGTTTGCACGATCTGCCCTTGTTCCTTCGGGGTGAGGGGTG
AGGGGTGGCCATACACGGTCAAACTGCGGTGCGGCATGTTAAAACACGTGTGCCATGCTTGGAGTAGTCGCGGTTGCGCT
TAGACTTGTTGAAACGAAGGGGTATTACTTGA-ACGGCCTGCAGGATTTATCCCTGGGTTTTTTTCTGAAAC--------
------------------TATGACCCAATGGTGCCCTATTTTTGTCTTTGCTGCTTTTACTTCCTAC------TTACTAG
CTTCCACAGCTTTTTCTTGCAACGTCACTCTTTATTTTAGCATTTATCACTGTCGCACATTAACTTAGCTTCGTGCGTGC
AGTATGAAGTTCTTGACAGTTGATACTATTACAACGACAACAATAAAGCCTTCTTTAGTCCCAAACAAATTGTGGTAGGC
TGAGTTTTGATTTGTGGATAGCTAATTTTCATGCACTCATGTCCATGATTAGTTATTTTGTGATATTCCAATCCTCCAGA
TTTCTTTTAACACACTCTAGTCTATCAGCATGTTATGTTTTAACCGCTCGCTTTGCGCTGGCGCTTTTGGAGATCTGTGT
CGTATATGCCTAAACCTAGAGGTAGAGCTTAGTTAGGACCGAGAGGGGCCACGACCCTCCAATTATTTTCAGCTTCTTCG
TATAATACTTGATATACTCATCATTGTATAGGCTAAATTTGACATGATAGGCTAAATTAGCCTCCTCAACTCTCTCTCAA
AGACTCATTTAACCCCTGTTTAATTCTTACTGGAGCTCTGTCA
>chr3D_1786
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-------------------------GTGTCAGCCAACAAGTGGATATCTACATGCTCATCGCGATTCTGTCAATTTTTTG
GTTATCCATTGATCGTTTTGATGTTATATCA--GTGTTAATACTTAATGCAGTTTCTTGCTTATAATAAGTGCTCAGTCC
ATTAAGTC--AAGACATTAGCATGCTTACAATAAACTTGCAGTTCATTAGATTGCTTACAATAAACTTATAATTAATTCA
AGTGTGCTGGTGGATTAATAATATGATTCAGATGTGTGCATCAAAGTTTATCTACATTGCAGATTTCAATCTATATTTAT
TGTTGGCATAGCTATGGTAGTTCCTGATAGTGGCAGTACAATGATTGCTAGCGTAGAGCATAATGCTGCCCGTTTGTTTG
TCCTGCAGATCCCTCTAGTGCATTAGTAAATCCTTCTAGTGGAGATCATTGCTCAGGTTTAGAAAGATCTTTCAAATTGT
CCTTCTACT--------------TGTAGCCAGCAAGTTTGATTGGTACTGTTTAGTCTTTACAGGTGCTGTTTGATTGAA
AATGAAGTTGGTTTGGTTTATT----TTTTCTACATTTCTCTCTAATTCCGACTGCTAATTGTACTTCAAATATTTGGTT
GCAAAGAGCTCCTGGCATGGCTAGCAAATTGTTTAGACTCCGAGAAACGTG--------------------------CCC
TAGGATGTGTCATATGCTTATATCCTAATGGAAGATGTTCTGTATTCAGGCAACATTTTGGAGGCGAAGCATTATCTTGA
TATATGCTTTCCAAGGGTATCCCAGATTATTGACAACAACCCATCTATAGCCTTCCAAGCTTATGAACATCTGTTGACAA
CCCTCGAGGCCGATTTTGATGG--------TAATTATTTATTTGTACTACTTTCTGACATTTGTACTAGTTTCTGATCAA
ACTAATCGAGTGTACCAAATTTAATGATTATTACCCTGTTTATGTGCTATAGGCGAGGAACTGGATCCGATGTTTCACAT
GCAC-AATTTCTTGGCTTGCTTAGCATGTTATAGATTGATGTACATCAAGGGAACAAACCTAGCATTCATCATCTCTTTG
GTTGAGTGCTTTGTGGCGGATATGGTAAAGAAGAGGGATTATCTGATGGGTCGACTCACAGTACGGACATTGATCGGCGC
TGCACCCACAAATTAAGGTGAATTTTACTAATTTCATGGCCTTCACAGCTTTCTG--CTCTGAGTTGTTCAAGTTATTCC
ACTGATACCTTTGTGCAAAAATCAACAAACAAAATCAGTTTGTTGAACACATCATTACATATCAAAGAAGGAA-AAATTA
GTGCAAGACATGCACTAGTACTCTGTCCGGTTGCTTAACACATC-----------TGTCGTTGCAAGAGATGTGCATCTG
CTCTGTAGTATTCTCATATGATTTCGTTGCC--TGCATTCAAATTTCGCAGTCACACTACTGTATTTATCCAAGCAAATG
CATTACTCCCTCCATTCCAAACCAGTGTGTGTTAG----TTTTTTTCATCCAAAATTCCATATTAGAATGTGTACTTCCT
ATTCC------------------------------------------------TTAAGTACTTCTACCCTTTTGCCGTAG
TAAT---------------------TACTAATTACTGTTCATCATACCAGTGCATGCAGCCTAACCATATCATGTTGGCA
AGAGAGGGATTTTGCGGGCGCATGTGCATGGATTGGGTCTTGTCTAGCGTGCGGCGCATGCATGTTGGAGAGAAAACGAG
ATTTACTGGTCTCGGTTGTTTCAAGGAGTCCGGGTGTCGCGCGAAAGTGCATTAACAAAGTAAATTGTGCGAGTAATTAG
GGGCTAAACTGGAAGCAATCCCCCCGTGCTACCCCTCCTTAGCATGTTCTCTAAAATGCACTCTACTATATTATGAAATG
GAAGGTTTAAGTTCCAAACAGGTCTAGTAGGACCGTGCGTTTGCAAGCTGCTTTGTTCGACACACACTAGTGCCCCTCCT
CGGTATAAGGAAGGACTAACCTTGGGACACACACTAGTACCATGTCCGTTTGTTCAACACAGCATCAATCCAAGTGCCGC
AGCAAGAGATGTGCAACTGCTTTGGTAGGAATCATGATG-----------------------------------------
----------------------------------------------------GCTTTAAGGCGATTGGATCGAGCATAGC
TTCACCATTTCACTAGATGCTATATCTACTTCAGAACAATACGCCAAAATCAGAACATAGATGCTATATCTACTTCAGAA
CAATACGCCAAAATCAGAACATACTCGAGAAGTAGGAAGTGAGAGCTACCTGCCTTGCTGGAGCTTTGGCGCCTCACCAG
AATGTTGCCGCCTCGCCTGGCTTGCGTGAGAGGGAAATGGGGTGG---CTGTATGGGGGAGGGAGGCGACCATTTGAAAT
TTGATTCACATCTGTAAGATGGCCATTGATGTGTGTTATATATCTTTTGCAGTTTCTTTTGATGGAAGTCCAAGTTCAGT
TGATGTTAACATATTTGAAAATTGAACTCAGATAGCCTTTCTCAGTTGTAGTTGTCACATGTTACTGTTGTATTCTGATA
CTGTGTTTTGTTTTGTATATTCATGTCACACAGGAATGAAGACTTCTATCAGCAGGACATTAGGAGAATATTGATTAACA
AGATGAGACGCGATTACAGAGAGAAGATGGAGGAGATGCCAAGTAAACCTTTGCAAGTTACTGTTACAGGACAAGTGATA
AAGGCACAT-TTGGTCAACAGATTTGTACATGAGCTCGGAGTCTGCTTGTTCTGCTACTGTTG-----------------
----TTGCTTCGTTTAGTTCGTAGGGACGAGAAGTGAAAATTTTGCACGATCTGCCCTTATTCCTAGA---------GTG
AGGGATGGGCATACATGGTCAAACTGCGGTGCGGCATGTTAAAACACGAGTGCCATGGTTGGAGTAGTCGCAATAGCACT
-----TTGTTGAAACGAAGGGGGTATTGCTTGCACGTCTTGCAGGATAAATCTCCGGGGTTTTCTCTGAAATTTTGAACC
GACTGGTTGCATGTTTCGTATGACCCAATGGTGCCCTATTTTTGTCTTTGCTGTTTTTTATTTCCTGCTGTATTTAGTAG
CTTCCACAGGGTGTTCTTTCAATGCCACTCTT------------------------------------------------
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-------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-----------------S--S---------S-----SS-----------S-----
-----S-------S-S--------SS---SSSS---------------------S----S-----S----SSS-SSSSSS
SS-S-SSSSS--S-----------S---------S---S-----------S-----------------S-----------
-----S-----------S--SS-SSS-SSSSSSSSSS--------S-S-----SS-----SSS-----------S-S--S
-SSSS-S-SSSSSS---------S-----S-------------------S-------------------S-S--------
--S----S----S--SS---------------------------------SSS------S--S-----S--------S-S
-------S-SSSSSSSSSSSSSS-------SS--------S---S--S---SSSSS----------SS----------S-
-S-----------------SS-SSSS-------------------S---S---------S--S---------S-------
-----------------------SS------S---------SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSS---
-----SS--S-S------------S-S--S------S--S----------SS----------S--S-----------SS-
S-----------S-----S------SS------S--S--S---S---SS-----SS--------S---S---SS-S----
-S---S---SS--S----S---SSSSSSSS--------S-----S------------------------------S----
------S--------------S--SS----------SS---------S-----S--S-----S--S-S-SSS-SS--S--
-S-SS-----SS------SS--S-----------SS--S-S---S-S----SS--------S--S--S-----S------
---S----S--S-SS--S-----S-----------------S--SS----SS------S---S--S---S----S-----
S-----SSS---S------S----S-------------S--------------S-SS--------S------S----S--
----------------------S--------S---------------------------------S----S--S------
------S-SS-S-----------------S---S----S-----SSSSSSSSSSS----S----------------S---
------------S----SSSS-SSSSSSSSSSS------S------S-----SS------S-----S-S-----------
S-S---------------SS-S----------SS-SSSS--------S----S----S------------------S---
---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----S----------SS-SSSS
-S-SSSSSSSSSSSSSSSSSSSSSS--S---------S------------------SSSS-SSSSSSSSSS--SSSS---
---------------------------------------------------SS--S----------------------S-
-----------S----------------S-S------S---S-S-----S-----------SS------SS--S------
--S------------S--------S-S------------S----S--------------------S------------S-
--S--SSS--S---------------------S-S--S--------S------S-----------------S--------
S-----S-SS-------------------S----------SS---S-----------S---S--------------S---
S------S-----------------S----SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S----S-----------------
-----S-S----------S---------S----S----S--SS-------------------------------------
--------------S-----------SSS----------------S----------------------S---------S-
---------S-SSS-----------------------S-------SSS------S-----------S-S-SS--------
------S-S--------------S------S---S-----S-------------SSS---------------------S-
-S--S---S---------S--------------------S--------S-----S---S---------------------
-----------S-----S-S---S---S-S----S-SS--------------S----S-S-------SSSSS--------
--------------------------------------------------S-----S--------SSSS-SS--SSSSSS
S-S-S-SSSS----------S-S-----S--S-----S---SS----SSS-S---SS-S-SS-SSSSSSSSSSSSSSSSS
SSSS-------S---S----S------SS-S--S---S--S------------------S-----SSSSSSSSSSSS---
----S---S------S--------------------------------S--------S-------------SS-S--S--
SSSSS-----------------SSS-SSS-SS----S-S--------SS---S-S---S----S-------S--------
-----------------------------------------------------S----SS--S-SSS---------S---
---------SS-S-----S---S-S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_982
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--ACCCCATCCCAAATCGCAAT----------------------------------------------------------
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>reverse_2474
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TGTACCC
TAGGACATGCCGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>forward_1046
--------------------------------------------------------------------------------
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------------------------------------------------------------------TGTTTCTGTCGAGG
TCCTGC--------------------------------------------------------------------------
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>reverse_2600
--------------------------------------------------------------------------------
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---------------------------------------TCCAGCTAGGGCCTTTGAAG---------------------
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>forward_1460
--------------------------------------------------------------------------------
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AGATCTGCGGTCAACCAAGG------------------------------------------------------------
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>reverse_3502
--------------------------------------------------------------------------------
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-------------------------------------------------------------GCTTGCACGGATTACCCTT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1748
--------------------------------------------------------------------------------
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------------------------------------------------TGGTGGTGCCATCAGAAGAC------------
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>reverse_3807
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----------------------------------------------ACTGCTTCGTTCGACACACA--------------
--------------------------------------------------------------------------------
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>forward_1749
--------------------------------------------------------------------------------
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-------------------------------------------------GGTGGTGCCATCAGAAGACA-----------
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>reverse_3814
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-----------------------------------------------------CGTTCGACACACACTAGTACC------
--------------------------------------------------------------------------------
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-------------------------------------------
>forward_1753
--------------------------------------------------------------------------------
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-----------------------------------------------------GTGCCATCAGAAGACACGGA-------
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_3870
--------------------------------------------------------------------------------
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-----------------------------TACACTAGTACTCTGTACGTTTGTTCA------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>forward_3638
--------------------------------------------------------------------------------
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------------------TTTCAAGGAGCCTGGGTGTG------------------------------------------
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>reverse_5339
--------------------------------------------------------------------------------
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----------------------------------------------------------TGGCGCTTTTGGAGATCTGT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
